View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6865A_low_177 (Length: 249)
Name: NF6865A_low_177
Description: NF6865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6865A_low_177 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 7 - 249
Target Start/End: Complemental strand, 24014190 - 24013948
Alignment:
| Q |
7 |
gtaacagagaggaaagaaggacgattgcacctgagcatgtattgaaagctttaggggtattcatctaatgaccaaaccatttaatctccaaattttgatg |
106 |
Q |
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| T |
24014190 |
gtaacagagaggaaagaaggacgattgcacctgagcatgtattgaaagctttaggggtattcatctaatgaacaaaccatttaatctccaaattttgatg |
24014091 |
T |
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| Q |
107 |
tggatccttttcaattttaatttgattgcttatattatacgccctcttcttggacgttctgtgcattgatttgtatatttctcatgtgtttccttttcaa |
206 |
Q |
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||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |
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| T |
24014090 |
tggatccttttcaattttaatttgattgcttatataatacgctctcttcttggacgttctgtgcattgatttgtatctttctcatgtggatccttttcaa |
24013991 |
T |
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| Q |
207 |
tggtgttattcttgatttttctttgcattgtagttgggtttga |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24013990 |
tggtgttattcttgatttttctttgcattgtagttgggtttga |
24013948 |
T |
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