View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6865A_low_208 (Length: 243)

Name: NF6865A_low_208
Description: NF6865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6865A_low_208
NF6865A_low_208
[»] chr6 (43 HSPs)
chr6 (1-224)||(27623005-27623228)
chr6 (54-224)||(27283713-27283883)
chr6 (28-209)||(33369755-33369944)
chr6 (30-221)||(27064174-27064373)
chr6 (30-221)||(30551307-30551506)
chr6 (28-209)||(29556241-29556430)
chr6 (30-221)||(27200870-27201069)
chr6 (30-221)||(27248164-27248363)
chr6 (30-192)||(4539086-4539256)
chr6 (28-214)||(13517519-13517713)
chr6 (28-214)||(34457811-34458005)
chr6 (30-209)||(14138728-14138915)
chr6 (30-224)||(28214138-28214340)
chr6 (30-194)||(4764462-4764634)
chr6 (30-209)||(29508106-29508293)
chr6 (28-211)||(29579717-29579908)
chr6 (28-194)||(26792516-26792690)
chr6 (30-192)||(26109728-26109899)
chr6 (30-209)||(27014409-27014596)
chr6 (54-209)||(27209584-27209747)
chr6 (54-209)||(27239481-27239644)
chr6 (30-221)||(27491811-27492011)
chr6 (54-209)||(26927437-26927600)
chr6 (30-221)||(27355410-27355609)
chr6 (28-221)||(26665962-26666163)
chr6 (28-221)||(26771933-26772134)
chr6 (54-209)||(16756506-16756669)
chr6 (30-200)||(28167188-28167366)
chr6 (30-194)||(4531994-4532166)
chr6 (30-221)||(4779584-4779783)
chr6 (30-221)||(16937333-16937532)
chr6 (103-209)||(24299169-24299275)
chr6 (103-200)||(24870402-24870499)
chr6 (30-215)||(8899004-8899197)
chr6 (54-192)||(15405882-15406028)
chr6 (54-192)||(15417669-15417815)
chr6 (103-200)||(22928263-22928360)
chr6 (30-221)||(16680832-16681031)
chr6 (103-209)||(27031706-27031812)
chr6 (54-209)||(27025827-27025990)
chr6 (54-209)||(13292296-13292460)
chr6 (54-161)||(20131253-20131368)
chr6 (54-161)||(22201502-22201617)
[»] chr5 (51 HSPs)
chr5 (30-221)||(15752118-15752317)
chr5 (30-221)||(30036128-30036327)
chr5 (30-221)||(31819681-31819880)
chr5 (30-221)||(33523086-33523285)
chr5 (28-214)||(40466807-40467001)
chr5 (28-209)||(6881007-6881196)
chr5 (28-209)||(9543986-9544175)
chr5 (30-221)||(9324165-9324365)
chr5 (30-221)||(26487075-26487275)
chr5 (33-192)||(37351927-37352094)
chr5 (28-214)||(33881815-33882009)
chr5 (28-221)||(37745607-37745808)
chr5 (28-221)||(18494026-18494227)
chr5 (28-221)||(28953053-28953254)
chr5 (30-221)||(12138864-12139063)
chr5 (28-221)||(43084956-43085150)
chr5 (28-200)||(2517768-2517948)
chr5 (30-221)||(3796235-3796434)
chr5 (30-221)||(37761676-37761875)
chr5 (28-214)||(11330343-11330537)
chr5 (28-209)||(18121691-18121881)
chr5 (28-209)||(15652019-15652208)
chr5 (54-211)||(22895119-22895284)
chr5 (30-214)||(30158729-30158921)
chr5 (30-194)||(31438166-31438338)
chr5 (1-221)||(32589506-32589734)
chr5 (30-221)||(34623201-34623400)
chr5 (28-200)||(41681408-41681590)
chr5 (30-200)||(8658753-8658931)
chr5 (28-221)||(30175170-30175371)
chr5 (30-194)||(24730678-24730850)
chr5 (30-221)||(5644502-5644701)
chr5 (1-95)||(13178730-13178824)
chr5 (30-221)||(28655947-28656146)
chr5 (30-221)||(13318086-13318285)
chr5 (30-221)||(13435929-13436128)
chr5 (28-215)||(37664762-37664957)
chr5 (54-211)||(23898587-23898753)
chr5 (30-221)||(18368790-18368989)
chr5 (54-209)||(22992425-22992588)
chr5 (103-209)||(23632664-23632770)
chr5 (54-209)||(23726931-23727094)
chr5 (103-209)||(24976538-24976644)
chr5 (57-200)||(25207012-25207163)
chr5 (57-200)||(25271168-25271319)
chr5 (103-209)||(24608939-24609045)
chr5 (54-209)||(11556048-11556211)
chr5 (103-209)||(30941324-30941430)
chr5 (54-186)||(13180101-13180241)
chr5 (54-190)||(33299249-33299393)
chr5 (54-209)||(33784176-33784339)
[»] chr8 (25 HSPs)
chr8 (30-221)||(29836023-29836222)
chr8 (28-214)||(28355273-28355467)
chr8 (30-200)||(18716177-18716355)
chr8 (28-221)||(31483192-31483393)
chr8 (28-221)||(33265420-33265621)
chr8 (30-224)||(12086051-12086253)
chr8 (30-221)||(44567680-44567880)
chr8 (1-95)||(15775288-15775382)
chr8 (30-221)||(19681156-19681355)
chr8 (28-183)||(31361267-31361430)
chr8 (28-221)||(19201704-19201906)
chr8 (54-209)||(2130631-2130794)
chr8 (54-209)||(15774260-15774423)
chr8 (54-200)||(22074275-22074429)
chr8 (54-209)||(14569841-14570004)
chr8 (54-200)||(18797404-18797558)
chr8 (54-211)||(22139598-22139763)
chr8 (56-209)||(33249049-33249210)
chr8 (103-209)||(19694802-19694908)
chr8 (103-198)||(16260635-16260730)
chr8 (103-198)||(19654746-19654841)
chr8 (54-209)||(21341533-21341697)
chr8 (30-221)||(9361304-9361502)
chr8 (103-209)||(27602333-27602439)
chr8 (103-192)||(19910587-19910676)
[»] chr3 (60 HSPs)
chr3 (30-221)||(24334835-24335034)
chr3 (28-221)||(28109362-28109564)
chr3 (30-221)||(18231851-18232050)
chr3 (30-221)||(17978352-17978551)
chr3 (30-221)||(6536144-6536343)
chr3 (30-221)||(10649730-10649928)
chr3 (28-214)||(5589755-5589949)
chr3 (28-214)||(5717721-5717915)
chr3 (28-214)||(5728631-5728825)
chr3 (28-214)||(5763543-5763737)
chr3 (28-209)||(11103783-11103972)
chr3 (28-214)||(29658366-29658560)
chr3 (30-209)||(5473638-5473825)
chr3 (30-209)||(18285780-18285967)
chr3 (30-209)||(18301081-18301268)
chr3 (30-209)||(31029667-31029854)
chr3 (30-209)||(32445801-32445988)
chr3 (30-211)||(4340100-4340289)
chr3 (28-221)||(5020370-5020571)
chr3 (30-221)||(17970281-17970481)
chr3 (30-221)||(47030114-47030314)
chr3 (30-221)||(22864265-22864464)
chr3 (30-221)||(22879324-22879523)
chr3 (30-221)||(28345830-28346029)
chr3 (30-209)||(4630430-4630617)
chr3 (38-194)||(4423582-4423746)
chr3 (30-221)||(5602714-5602913)
chr3 (28-214)||(32297297-32297491)
chr3 (28-221)||(20570255-20570456)
chr3 (30-221)||(16404193-16404392)
chr3 (30-221)||(31957857-31958056)
chr3 (30-221)||(51788681-51788880)
chr3 (30-200)||(48472590-48472768)
chr3 (28-221)||(18249377-18249578)
chr3 (54-211)||(19701064-19701229)
chr3 (54-209)||(4728275-4728438)
chr3 (54-209)||(5658783-5658946)
chr3 (54-209)||(6208544-6208707)
chr3 (30-200)||(20072693-20072871)
chr3 (28-194)||(21681406-21681580)
chr3 (28-221)||(10402811-10403012)
chr3 (103-209)||(15886222-15886328)
chr3 (54-209)||(18057917-18058080)
chr3 (54-209)||(18337273-18337436)
chr3 (54-209)||(22381028-22381191)
chr3 (54-209)||(29142202-29142365)
chr3 (28-221)||(8218284-8218485)
chr3 (103-211)||(16422854-16422962)
chr3 (28-221)||(28027930-28028131)
chr3 (103-209)||(8282965-8283071)
chr3 (54-200)||(15367923-15368078)
chr3 (54-192)||(15734564-15734710)
chr3 (103-209)||(4690324-4690430)
chr3 (54-209)||(4790079-4790242)
chr3 (54-200)||(16617915-16618070)
chr3 (54-200)||(22041087-22041242)
chr3 (54-209)||(35887409-35887572)
chr3 (30-95)||(16599406-16599471)
chr3 (33-95)||(7080022-7080084)
chr3 (105-209)||(7079877-7079981)
[»] chr2 (40 HSPs)
chr2 (30-221)||(3789138-3789337)
chr2 (30-221)||(13929959-13930158)
chr2 (30-221)||(19409832-19410031)
chr2 (30-221)||(37932072-37932271)
chr2 (28-221)||(21670519-21670720)
chr2 (30-221)||(16822686-16822885)
chr2 (30-221)||(16898595-16898794)
chr2 (28-214)||(253998-254192)
chr2 (28-214)||(34297851-34298045)
chr2 (30-221)||(32056447-32056646)
chr2 (28-214)||(9343333-9343527)
chr2 (28-214)||(16168180-16168374)
chr2 (28-214)||(27810405-27810599)
chr2 (28-214)||(37679244-37679438)
chr2 (28-214)||(37694509-37694703)
chr2 (28-214)||(37945211-37945405)
chr2 (30-221)||(39896764-39896963)
chr2 (28-214)||(39045228-39045423)
chr2 (22-214)||(12593516-12593716)
chr2 (30-221)||(11628533-11628732)
chr2 (54-200)||(27397051-27397205)
chr2 (30-200)||(31882987-31883165)
chr2 (30-200)||(37384371-37384549)
chr2 (54-211)||(21696561-21696726)
chr2 (28-221)||(34161536-34161737)
chr2 (54-211)||(34268295-34268460)
chr2 (30-221)||(22921492-22921691)
chr2 (30-221)||(34868329-34868528)
chr2 (30-194)||(12709972-12710144)
chr2 (1-95)||(3790473-3790567)
chr2 (30-200)||(27123216-27123394)
chr2 (28-221)||(27782918-27783119)
chr2 (54-200)||(19449784-19449939)
chr2 (54-209)||(23117481-23117644)
chr2 (103-209)||(20844600-20844706)
chr2 (28-194)||(40240245-40240419)
chr2 (103-209)||(28888939-28889045)
chr2 (103-200)||(27427902-27428000)
chr2 (103-209)||(12662175-12662282)
chr2 (54-209)||(31868181-31868344)
[»] chr7 (34 HSPs)
chr7 (54-224)||(26508976-26509154)
chr7 (28-214)||(26663153-26663347)
chr7 (28-214)||(26678345-26678539)
chr7 (1-209)||(3451936-3452152)
chr7 (28-214)||(16744761-16744955)
chr7 (28-221)||(31083864-31084066)
chr7 (1-221)||(26268300-26268527)
chr7 (28-209)||(2779929-2780118)
chr7 (28-221)||(26441938-26442139)
chr7 (30-221)||(26313106-26313306)
chr7 (30-221)||(31557647-31557847)
chr7 (30-221)||(4206069-4206268)
chr7 (28-214)||(26596356-26596551)
chr7 (28-194)||(31130616-31130791)
chr7 (30-221)||(45393913-45394112)
chr7 (28-221)||(4138486-4138687)
chr7 (28-209)||(22148573-22148762)
chr7 (28-209)||(22152800-22152989)
chr7 (28-209)||(22208715-22208904)
chr7 (30-221)||(11447582-11447781)
chr7 (30-221)||(26519501-26519700)
chr7 (54-200)||(16048027-16048181)
chr7 (28-221)||(24585776-24585978)
chr7 (30-200)||(39206407-39206585)
chr7 (30-200)||(45737995-45738173)
chr7 (54-209)||(5154768-5154931)
chr7 (103-200)||(16443329-16443426)
chr7 (54-209)||(11418070-11418233)
chr7 (103-209)||(16511773-16511879)
chr7 (54-209)||(2161257-2161419)
chr7 (28-186)||(5140578-5140744)
chr7 (54-200)||(10848299-10848453)
chr7 (54-200)||(5165078-5165232)
chr7 (103-209)||(10910274-10910380)
[»] chr4 (28 HSPs)
chr4 (28-221)||(54840097-54840298)
chr4 (30-221)||(31119870-31120069)
chr4 (28-214)||(20331793-20331987)
chr4 (30-221)||(21976410-21976609)
chr4 (30-214)||(27156686-27156878)
chr4 (30-209)||(14752876-14753063)
chr4 (28-209)||(36323695-36323884)
chr4 (28-209)||(36337904-36338093)
chr4 (28-211)||(6576552-6576744)
chr4 (1-221)||(40098964-40099192)
chr4 (30-211)||(5012597-5012787)
chr4 (30-200)||(5701256-5701434)
chr4 (30-200)||(39857342-39857520)
chr4 (28-194)||(18794001-18794175)
chr4 (30-221)||(33667161-33667360)
chr4 (54-200)||(15234546-15234700)
chr4 (30-221)||(14105250-14105449)
chr4 (54-209)||(24585755-24585918)
chr4 (1-95)||(24813728-24813822)
chr4 (30-221)||(30760470-30760669)
chr4 (54-200)||(15276010-15276164)
chr4 (54-200)||(15379622-15379776)
chr4 (54-211)||(1906984-1907149)
chr4 (30-209)||(24119359-24119547)
chr4 (33-209)||(34182320-34182504)
chr4 (103-200)||(14671717-14671814)
chr4 (103-209)||(17019747-17019853)
chr4 (30-95)||(24814661-24814726)
[»] chr1 (16 HSPs)
chr1 (28-221)||(51644921-51645122)
chr1 (28-221)||(10951791-10951992)
chr1 (28-194)||(10969369-10969543)
chr1 (28-221)||(3647846-3648047)
chr1 (28-221)||(28591780-28591981)
chr1 (30-200)||(28156425-28156603)
chr1 (30-200)||(41786694-41786872)
chr1 (54-192)||(20333801-20333947)
chr1 (54-211)||(16201415-16201580)
chr1 (54-209)||(14692301-14692464)
chr1 (54-209)||(14694983-14695146)
chr1 (54-209)||(14697667-14697830)
chr1 (54-209)||(14700348-14700511)
chr1 (103-209)||(21891191-21891297)
chr1 (103-200)||(20467504-20467601)
chr1 (28-80)||(13769562-13769614)
[»] scaffold0038 (1 HSPs)
scaffold0038 (30-224)||(14636-14838)
[»] scaffold0322 (2 HSPs)
scaffold0322 (30-214)||(2361-2553)
scaffold0322 (54-200)||(12769-12923)
[»] scaffold0237 (1 HSPs)
scaffold0237 (30-200)||(8301-8479)
[»] scaffold0159 (2 HSPs)
scaffold0159 (30-221)||(2537-2736)
scaffold0159 (144-221)||(18505-18582)
[»] scaffold0143 (2 HSPs)
scaffold0143 (28-221)||(10615-10817)
scaffold0143 (103-209)||(33981-34087)
[»] scaffold0418 (1 HSPs)
scaffold0418 (28-209)||(12725-12914)
[»] scaffold0241 (1 HSPs)
scaffold0241 (103-200)||(26011-26108)
[»] scaffold0109 (1 HSPs)
scaffold0109 (54-200)||(28012-28164)
[»] scaffold0336 (1 HSPs)
scaffold0336 (30-221)||(16273-16472)
[»] scaffold0240 (1 HSPs)
scaffold0240 (103-209)||(24415-24521)
[»] scaffold0093 (1 HSPs)
scaffold0093 (54-200)||(490-644)
[»] scaffold0792 (1 HSPs)
scaffold0792 (54-209)||(4000-4163)
[»] scaffold0099 (1 HSPs)
scaffold0099 (104-209)||(40064-40171)
[»] scaffold0547 (1 HSPs)
scaffold0547 (54-209)||(9045-9209)
[»] scaffold0089 (1 HSPs)
scaffold0089 (153-209)||(6751-6807)


Alignment Details
Target: chr6 (Bit Score: 196; Significance: 1e-107; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 27623005 - 27623228
Alignment:
Q  1 gaatgattgaaaggcatgatggttgatagtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatca 100  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27623005 gaatgattgaaatgcatgatggttgacagtttgtagacacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctacatca 27623104  T
Q  101 tagaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27623105 tagaaatcctctttggagataacgccgttgggagacgtaccagaaccatggctgagggtagatagctaatcaacttgctggggatagaatcttggaagac 27623204  T
Q  201 ccgactggggaaaaccccgttatg 224  Q
    ||||||||||| ||| ||||||||    
T  27623205 ccgactggggataacgccgttatg 27623228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 27283713 - 27283883
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcatagaaatcctctttggagataacgccgttgggagacgtaccggaaccatggct 153  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27283713 agacaagacattggagtattgggcacgtagtggctcgtgctacatcatagaaatcctctttggagataacgccgttgggagacgtaccggaaccatggct 27283812  T
Q  154 gagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgttatg 224  Q
    ||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||| ||| ||||||||    
T  27283813 gagggtagatagctaatcaacttactggggatagaattctggaagacccgactggggataacgccgttatg 27283883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 33369755 - 33369944
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  33369755 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 33369854  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    | ||| |||||||||||||| ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | ||||||    
T  33369855 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactggg 33369944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 27064373 - 27064174
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | ||||||||||||||||||     
T  27064373 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 27064274  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| | |||||||||||||||||||  |  ||  | ||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  27064273 acgtcgttgggagacgtatcagaaccatggctgagggcaggcaagtatgcgacttgctggagatagaatcttggaagacccgactggggaaaacgccgtt 27064174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 30551307 - 30551506
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| |||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  30551307 tttgtaggcacgacttcacggggaagacaagatatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 30551406  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  30551407 acgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 30551506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 29556430 - 29556241
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||| |||| |||    
T  29556430 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctttttgaaga 29556331  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    | |||||||||||||||||| |||||||||||||||||||||||||  |  |||||||||||||||||||||| ||||||| | ||||||    
T  29556330 tgacgccgttgggagacgtatcggaaccatggctgagggcagataggcatgcaacttgctggggatagaatctcggaagactctactggg 29556241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 27201069 - 27200870
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| || | |        ||||||||||||||||||     
T  27201069 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgagctatattacaccttcttggaaatcctctttggagatg 27200970  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||  ||||   |||||||||||| |||||    
T  27200969 acgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgagagactttactggggaaaacaccgtt 27200870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 27248164 - 27248363
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| || | |        ||||||||||||||||||     
T  27248164 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgagctatattacaccttcttggaaatcctctttggagatg 27248263  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||  ||||   |||||||||||| |||||    
T  27248264 acgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgagagactttactggggaaaacaccgtt 27248363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 4539086 - 4539256
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  4539086 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 4539185  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 192  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  4539186 acgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 4539256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 13517519 - 13517713
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  13517519 agtttgtaggcacgacttcacggggaagacaagacgttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 13517618  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||| ||| |||  |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  13517619 tgacgtcgttgggagacgtatcgggacctaggctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 13517713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 34457811 - 34458005
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| || | |        |||||||||||||||||    
T  34457811 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacatagtggctcgtgctatattacacattcttggaaatcctctttggaga 34457910  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| |||||| |||||||||||| ||||||||||||    
T  34457911 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagagtcttggaagacctgactggggaaaa 34458005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 14138728 - 14138915
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  14138728 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 14138827  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||| ||  ||||| |||||||||||||||| ||||||| | ||||||    
T  14138828 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctactggg 14138915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 30 - 224
Target Start/End: Complemental strand, 28214340 - 28214138
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  28214340 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 28214241  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||||||  |||||||||||  || |||||| ||||| |   |||||||||||| |||||    
T  28214240 acgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgtt 28214141  T
Q  222 atg 224  Q
    |||    
T  28214140 atg 28214138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 4764634 - 4764462
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  4764634 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 4764535  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 194  Q
    ||| ||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||||||||||||||    
T  4764534 acgtcgttgggagacgtattggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttg 4764462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 209
Target Start/End: Complemental strand, 29508293 - 29508106
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  29508293 tttgtaggcacgacttcacggagaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 29508194  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||| ||   ||||||||||||||||||||| ||||||| | ||||||    
T  29508193 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgtaacttgctggggatagaatctcggaagactctactggg 29508106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 29579908 - 29579717
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| || | |        |||||||||| ||||||    
T  29579908 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggcccgtgctatattacacattcttggaaatcctctatggaga 29579809  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactgggga 211  Q
    | ||| |||||||||||||| |||||||||||| |||||| | ||| |   ||||||||||| ||||||||||||||||||| |||||||||    
T  29579808 tgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtgtgcaacttgctggagatagaatcttggaagacctgactgggga 29579717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 26792690 - 26792516
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  26792690 agtttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 26792591  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 194  Q
      ||| ||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||||||||||||||    
T  26792590 cgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttg 26792516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 26109728 - 26109899
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgcta--------catcatagaaatcctctttggagata 121  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||        | || | ||||||||||||||||||     
T  26109728 tttgtaggcacgacttcacggggaagacgagacatcagagtattgggcacgtagtggctcgtgctatgttacaccttcttggaaatcctctttggagatg 26109827  T
Q  122 acgccgtt-gggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 192  Q
    ||| |||| |||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  26109828 acgtcgtttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 26109899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 209
Target Start/End: Complemental strand, 27014596 - 27014409
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  27014596 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 27014497  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||| ||||||||||||||  |||||||||||||||||||| ||| ||  | ||| |||||||||||||||| ||||||| | ||||||    
T  27014496 acgtcgttgggagacgtattggaaccatggctgagggcaggtaggtatgcgactcgctggggatagaatctcggaagactctactggg 27014409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 27209747 - 27209584
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacat--catag------aaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| ||  ||||       ||||||||||||||||||||| |||||||||||||| |||||    
T  27209747 agacaagacattggagtattgggcacgtagtggctcgtgctagattacatattccagtaaatcctctttggagataacgtcgttgggagacgtatcggaa 27209648  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | ||||||    
T  27209647 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactggg 27209584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 27239481 - 27239644
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacat--catag------aaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| ||  ||||       ||||||||||||||||||||| |||||||||||||| |||||    
T  27239481 agacaagacattggagtattgggcacgtagtggctcgtgctagattacatattccagtaaatcctctttggagataacgtcgttgggagacgtatcggaa 27239580  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | ||||||    
T  27239581 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactggg 27239644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 27492011 - 27491811
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||| || | |        ||||||||||||||||||     
T  27492011 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtagctcgtgctatattacaccttcttggaaatcctctttggagatg 27491912  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggaaaaccccgt 220  Q
    ||| |||||||||||||  ||| ||||||||||||||||| ||| ||| |||||||| ||||||||||||||||  |||||  || ||||||||| ||||    
T  27491911 acgtcgttgggagacgtttcgggaccatggctgagggcaggtaggtaaacaacttgcttggggatagaatcttgagagacctcaccggggaaaacgccgt 27491812  T
Q  221 t 221  Q
    |    
T  27491811 t 27491811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 26927600 - 26927437
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        ||||||||||||||||||||||||||||||||||||| |||||    
T  26927600 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagataacgccgttgggagacgtatcggaa 26927501  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||| ||||||||  |||||||||||||||| |||||||||||||||| || |||| | ||||||    
T  26927500 ccaaggctgaggatagatagctaatcaactcgctggggatagaatctcgggagactctactggg 26927437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 27355410 - 27355609
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |        || | |||||||||| |||||||     
T  27355410 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatg 27355509  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| ||||||| |||||| |||| ||| |||||||||||| ||| ||  ||||||||||||||||||||||||  |||||  || ||||||||| |||||    
T  27355510 acgtcgttgggggacgtatcggagccaaggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagacctcaccggggaaaacgccgtt 27355609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 26665962 - 26666163
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||||||||||    
T  26665962 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatatgacacattcttggaaatcctctttggaga 26666061  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||  ||| |||  |||||||||  |  || ||  ||||||||||| ||||||||||||||||||   |||||||||||| |||    
T  26666062 tgacgtcgttgggagacgtttcgggacctaggctgagggtgggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccg 26666161  T
Q  220 tt 221  Q
    ||    
T  26666162 tt 26666163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 26771933 - 26772134
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||||||||||    
T  26771933 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatatgacacattcttggaaatcctctttggaga 26772032  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||  ||| |||  |||||||||  |  || ||  ||||||||||| ||||||||||||||||||   |||||||||||| |||    
T  26772033 tgacgtcgttgggagacgtttcgggacctaggctgagggtgggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccg 26772132  T
Q  220 tt 221  Q
    ||    
T  26772133 tt 26772134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 16756669 - 16756506
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  16756669 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 16756570  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | ||||||    
T  16756569 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactggg 16756506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 28167366 - 28167188
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |        || | ||||||||||||||||||     
T  28167366 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 28167267  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| |||||||||||||  ||| |||  |||||||||| | ||||||  |||||||||||||||||| |||||| ||||    
T  28167266 acgtcgttgggagacgtttcgggacctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagac 28167188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 4532166 - 4531994
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| |        || | ||||||||||||||||||     
T  4532166 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgagctatattacacattcttggaaatcctctttggagatg 4532067  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 194  Q
    ||| |||||||||||||  ||| |||  |||||||||| | ||||||  ||||||||||||||||||||||||    
T  4532066 acgtcgttgggagacgtttcgggacctaggctgagggctggtagctatgcaacttgctggggatagaatcttg 4531994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 4779783 - 4779584
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||| | ||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  4779783 tttgtaggcacgacttcacggggaagacaagacatcagaattttgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 4779684  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||| |||  ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||||||| |||||    
T  4779683 acgtcgttgggagacgtttcgggacctaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 4779584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 16937333 - 16937532
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        || || |||| |||||||     
T  16937333 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagattctctatggagatg 16937432  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||||||||||| |||||| | ||| ||    |||||||||||||||| |||||  |||| | |||||||||||| |||||    
T  16937433 acgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtgacttgctggggatagagtcttgagagactccactggggaaaacgccgtt 16937532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 24299169 - 24299275
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| |    
T  24299169 gaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactc 24299268  T
Q  203 gactggg 209  Q
     ||||||    
T  24299269 tactggg 24299275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 24870499 - 24870402
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  24870499 gaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 24870402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 30 - 215
Target Start/End: Original strand, 8899004 - 8899197
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | | |        || ||||||| |||||||     
T  8899004 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatg 8899103  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaac 215  Q
    ||| |||||||||||||| |||||||||||| |||||| | ||| ||   ||||||||||||||||| |||||  |||| | || |||||||||    
T  8899104 acgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagactccaccggggaaaac 8899197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 192
Target Start/End: Original strand, 15405882 - 15406028
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcataga--------aatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | | |        |||||||||||||||| ||| |||||||||||||| ||| |    
T  15405882 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacgtatcggga 15405981  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatct 192  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||    
T  15405982 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 15406028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 192
Target Start/End: Original strand, 15417669 - 15417815
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcataga--------aatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | | |        |||||||||||||||| ||| |||||||||||||| ||| |    
T  15417669 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacgtatcggga 15417768  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatct 192  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||    
T  15417769 ccatggctgagggcaggtagctatgcaacttgctggggatagaatct 15417815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 22928263 - 22928360
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||||||||||  |||||||||| ||| ||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  22928263 gaaatcctctttggagataacatcgttgggagatgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 22928360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 16681031 - 16680832
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||  | | |        || ||||||| |||||||     
T  16681031 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacatagtggctcgtgctatgttacacattctcggagatcctctatggagatg 16680932  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||||||||||| |||||| | ||| ||   ||||||||||||||||| |||||  |||| | || ||||||||| |||||    
T  16680931 acgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagactccaccggggaaaacgccgtt 16680832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 27031812 - 27031706
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||  ||||||||||||||||| |||| ||||||| |    
T  27031812 gaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagttatgcaacttgctggggataggatctcggaagactc 27031713  T
Q  203 gactggg 209  Q
     ||||||    
T  27031712 tactggg 27031706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 27025990 - 27025827
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcataga--------aatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | | |        |||||||||||||||| ||| |||||||||||||| ||| |    
T  27025990 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacgtatcggga 27025891  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||| |||||||||| | ||| ||  ||||||||||||||||||||||||| |||| | ||||||    
T  27025890 ccaaggctgagggccggtagttatgcaacttgctggggatagaatcttgggagactctactggg 27025827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 13292296 - 13292460
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| ||||||| |||||| ||| |    
T  13292296 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggggacgtatcggga 13292395  T
Q  146 ccatggctgagggcagatag-ctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||| |||||||||| | ||| |||  ||||||||||||||||||||||||| |||| | ||||||    
T  13292396 ccaaggctgagggccggtagtctatgcaacttgctggggatagaatcttgggagactctactggg 13292460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 20131368 - 20131253
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||  |||| ||||||||| |||||||||||||| |||| |        ||||||||||||||||||| || |||||||||||||| || ||    
T  20131368 agacaagacatcggagtgttgggcacgtagtggctcgtgctatatcacacattcctggaaatcctctttggagatatcgtcgttgggagacgtatcgaaa 20131269  T
Q  146 ccatggctgagggcag 161  Q
    ||||||||||||||||    
T  20131268 ccatggctgagggcag 20131253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 22201502 - 22201617
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||  |||| ||||||||| |||||||||||||| |||| |        ||||||||||||||||||| || |||||||||||||| || ||    
T  22201502 agacaagacatcggagtgttgggcacgtagtggctcgtgctatatcacacattcctggaaatcctctttggagatatcgtcgttgggagacgtatcgaaa 22201601  T
Q  146 ccatggctgagggcag 161  Q
    ||||||||||||||||    
T  22201602 ccatggctgagggcag 22201617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 15752118 - 15752317
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||| |||     
T  15752118 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatg 15752217  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  15752218 acgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgtt 15752317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 30036327 - 30036128
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        |||||||||||||| |||     
T  30036327 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatg 30036228  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  30036227 acgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgtt 30036128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 31819681 - 31819880
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||  |||||||| ||||| || | |        ||||||||||||||||||     
T  31819681 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacatagtggctcatgctatattacacattcttggaaatcctctttggagatg 31819780  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  31819781 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacccgactggggaaaacgccgtt 31819880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 33523285 - 33523086
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  33523285 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 33523186  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  33523185 acgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 33523086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 40466807 - 40467001
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  40466807 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 40466906  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  40466907 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 40467001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 6881196 - 6881007
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  6881196 agtttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 6881097  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    | ||| |||||||||||||| ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | ||||||    
T  6881096 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactggg 6881007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 9543986 - 9544175
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  9543986 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 9544085  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    | ||| |||||||||||||| ||||||||||||||||||||| ||| ||  ||||| |||||||||||||||| ||||||| | ||||||    
T  9544086 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctactggg 9544175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 9324365 - 9324165
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  9324365 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 9324266  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggaaaaccccgt 220  Q
    ||| |||||||||||||| ||||||||||||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||||||| ||||    
T  9324265 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgt 9324166  T
Q  221 t 221  Q
    |    
T  9324165 t 9324165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 26487275 - 26487075
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  26487275 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 26487176  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggaaaaccccgt 220  Q
    ||| |||||||||||||| ||||||||||||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||||||| ||||    
T  26487175 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgt 26487076  T
Q  221 t 221  Q
    |    
T  26487075 t 26487075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 192
Target Start/End: Original strand, 37351927 - 37352094
Alignment:
Q  33 gtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacg 124  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||| |||    
T  37351927 gtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacg 37352026  T
Q  125 ccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 192  Q
     |||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  37352027 tcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 37352094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 214
Target Start/End: Complemental strand, 33882009 - 33881815
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  33882009 agtttgtaggcacgacttcacggggaagacaagacgttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 33881910  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||| ||| |||  |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  33881909 tgacgtcgttgggagacgtatcgggacctaggctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 33881815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 37745607 - 37745808
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  37745607 agtttgtaggcacgacttcacggggaaaacaagacatcagagtattgggcacgtagtggctcgtgctatattacaccttcttggaaatcctctttggaga 37745706  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||| ||||||||||||||||||||| ||||||  ||||| ||||||||||||||||||  ||||   |||||||||||| |||    
T  37745707 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaactcgctggggatagaatcttgagagactttactggggaaaacaccg 37745806  T
Q  220 tt 221  Q
    ||    
T  37745807 tt 37745808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 18494026 - 18494227
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgcta-------cat-catagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||       ||| | | |||||||||||||||||    
T  18494026 agtttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacatagtggctcgtgctatgttacacattcttggaaatcctctttggaga 18494125  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||| |||||||||||||||||||   ||||||  ||||||||||||||||||||||||| |||| | || ||||||||| |||    
T  18494126 tgacgtcgttgggagacgtatcggaaccatggctgagggccagtagctatgcaacttgctggggatagaatcttgggagactctaccggggaaaacgccg 18494225  T
Q  220 tt 221  Q
    ||    
T  18494226 tt 18494227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 28953053 - 28953254
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacat--catag------aaatcctctttggaga 119  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||  ||||       ||||||||||||||||    
T  28953053 agtttgtaggcacgacttcacggggaagacaagacattggagtattgggcacgtagtggctcgtgctatattacatattcttgaaaatcctctttggaga 28953152  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||| ||| ||||||||||||||||| ||||||  || ||||||||||| ||||||| |||||||   |||||||||||| |||    
T  28953153 tgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcatcttgctggggacagaatctcggaagactttactggggaaaacgccg 28953252  T
Q  220 tt 221  Q
    ||    
T  28953253 tt 28953254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 12139063 - 12138864
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  12139063 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 12138964  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||||||| |||||    
T  12138963 acgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 12138864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 43085150 - 43084956
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca-tcatagaaatcctctttggagataacgcc 126  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| | || | |||||||||| ||||||| ||| |    
T  43085150 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtaatggctcgtgctatattcttggaaatcctctctggagatgacgtc 43085051  T
Q  127 gttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||||||||||||| |||||||||||| |||||| | ||| ||   ||||||||||||||||| |||||  |||| | || ||||||||| |||||    
T  43085050 gttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagactccaccggggaaaacgccgtt 43084956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 200
Target Start/End: Complemental strand, 2517948 - 2517768
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||||||||||    
T  2517948 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 2517849  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    | ||| ||||||||||||||||||| ||| ||||||||||||  || ||  ||||||||||| |||||||||||| |||||    
T  2517848 tgacgtcgttgggagacgtaccggagccacggctgagggcaggcaggtatgcaacttgctggagatagaatcttgaaagac 2517768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 3796434 - 3796235
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  3796434 tttgtaggcacgacttcacggggaagacaagacattagagcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 3796335  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||||||| |||||    
T  3796334 acgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 3796235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 37761875 - 37761676
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| |||||||||||||||||||||||| || ||| ||||||||||| |||||||||||||| || | |        ||||||||||||| ||||     
T  37761875 tttgtaggcacgacttcacggggaagacaagatatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatg 37761776  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| |||||   ||||||||||| ||||||||||||||||||   |||||||||||| |||||    
T  37761775 acgtcgttgggagacgtatcggaaccatggctgagggcaggtagctgtgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 37761676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 214
Target Start/End: Complemental strand, 11330537 - 11330343
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || | |        |||||||||||||||||    
T  11330537 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagcggctcgtgctatattacacattcttggaaatcctctttggaga 11330438  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||| |||||||||||| |||||| | ||| ||   ||||||||||||||||| |||||  ||||| ||||||||||||    
T  11330437 tgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagacctgactggggaaaa 11330343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 18121691 - 18121881
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacatt-agagtattgggcacggagtggctcgtgctacatca--------tagaaatcctctttggag 118  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||| ||||        | ||||||||||||||||    
T  18121691 agtttgtaggcacgacttcaccgggaagacaagacatttagagtattgggcacgtagtggctcgtgctatatcacgcattcctggaaatcctctttggag 18121790  T
Q  119 ataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    || ||| |||||||||||||  |||||||| |||||||||||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  18121791 atgacgtcgttgggagacgtgtcggaaccaaggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 18121881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 15652019 - 15652208
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||||||||||    
T  15652019 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 15652118  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    | | | |||||||||||||  || ||||| |||||||||||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  15652119 tgatgtcgttgggagacgtgtcgaaaccaaggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 15652208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 22895284 - 22895119
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    ||||||| |||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||||||| |||||||||||||| |||||    
T  22895284 agacaagtcattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacgtatcggaa 22895185  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactgggga 211  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| ||||||| | ||||||||    
T  22895184 ccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactctactgggga 22895119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 30 - 214
Target Start/End: Complemental strand, 30158921 - 30158729
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  30158921 tttgtaggcacgacttcacggagaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 30158822  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    ||| |||||||||||||| | |||||| ||||||||  || ||| ||  ||||||||||| ||||||||||||||||||  ||||||||||||    
T  30158821 acgtcgttgggagacgtatcagaaccaaggctgaggataggtaggtatgcaacttgctggagatagaatcttggaagacttgactggggaaaa 30158729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 31438338 - 31438166
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  31438338 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 31438239  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 194  Q
    ||| ||||||||||||||  |||||||||||||||||||| ||  ||  ||||||||||||||||||||||||    
T  31438238 acgtcgttgggagacgtattggaaccatggctgagggcaggtaagtatgcaacttgctggggatagaatcttg 31438166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 32589506 - 32589734
Alignment:
Q  1 gaatgattgaaaggcatgatggttgatagtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatca 100  Q
    ||||| ||| || ||||||| ||||  ||||||||| ||||||||| |||| ||||||||||||| |||||||||||||| |||||||||||||| || |    
T  32589506 gaatgcttgtaatgcatgatcgttggcagtttgtaggcacgacttcgcgggaaagacaagacattggagtattgggcacgtagtggctcgtgctatatta 32589605  T
Q  101 ta--------gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 192  Q
     |        |||||||||||||| ||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||    
T  32589606 cacattcttggaaatcctctttggggatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatacaacttgctggagatagaatct 32589705  T
Q  193 tggaagacccgactggggaaaaccccgtt 221  Q
    ||| ||||| ||||||||| ||| |||||    
T  32589706 tgggagacctgactggggagaacgccgtt 32589734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 34623400 - 34623201
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  34623400 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 34623301  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||| ||| ||||| |||||| ||| ||  ||||||||||||||||||||||||  |||| | || ||||||||| |||||    
T  34623300 acgtcgttgggagacgtatcggagccaaggctgggggcaggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgtt 34623201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 200
Target Start/End: Complemental strand, 41681590 - 41681408
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacat----cat------agaaatcctctttgga 117  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||    |||      | ||||||||||||||    
T  41681590 agtttgtaggcacgacttcacggggaagacaagtcattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaaaatcctctttgga 41681491  T
Q  118 gataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| ||| |||||||||||||  |||||||||| |||||||||| || |||  |||||||||||||||||||||| |||||||    
T  41681490 gatgacgtcgttgggagacgtgtcggaaccatgactgagggcaggtaactatgcaacttgctggggatagaatctcggaagac 41681408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 30 - 200
Target Start/End: Original strand, 8658753 - 8658931
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  8658753 tttgtaggcacgacttcacggggaagacaagacatcagagtgttgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 8658852  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| || ||||||||||| ||||||||||||||||||||| ||||||  |||||||||||  ||||||||| |||||||    
T  8658853 acgtcgctgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggaaatagaatctcggaagac 8658931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 30175371 - 30175170
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||| ||||||||||    
T  30175371 agtttgtaggcacgactttacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcttctttggaga 30175272  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||||||| |||    
T  30175271 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccg 30175172  T
Q  220 tt 221  Q
    ||    
T  30175171 tt 30175170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 24730850 - 24730678
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| || | |        ||||||||||||||||||     
T  24730850 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggcccgtgctatattacacattcttggaaatcctctttggagatg 24730751  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 194  Q
    ||| ||||||||||||||  |||||||||||||||||||| ||| ||  | ||||||||||||||||||||||    
T  24730750 acgtcgttgggagacgtattggaaccatggctgagggcaggtaggtatgccacttgctggggatagaatcttg 24730678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 5644701 - 5644502
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | ||||||||||||||||||     
T  5644701 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 5644602  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||  || |||||||||  || | | |||||||||||| |||||    
T  5644601 acgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctgtagacagaatcttgagaggctccactggggaaaacgccgtt 5644502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 13178730 - 13178824
Alignment:
Q  1 gaatgattgaaaggcatgatggttgatagtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgcta 95  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  13178730 gaatgattgaaatgcatgatggttgacagtttgtagacacgacttcacggggaagacaagacattagagtattgggcacgtggtggctcgtgcta 13178824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 28656146 - 28655947
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgc-----taca---tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     ||||   || | |||||| |||||||||||     
T  28656146 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcttctttggagatg 28656047  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||  || |||||||||||| ||| ||  || |||||||||||||||||||||  |||| | || ||||||||| |||||    
T  28656046 acgtcgttgggagacgtatcggagtcaaggctgagggcaggtaggtatgcaccttgctggggatagaatcttgagagactccaccggggaaaacgccgtt 28655947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 13318086 - 13318285
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  13318086 tttgtaggcacgacttcacggggaagacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 13318185  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||| |||  ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||||||| |||||    
T  13318186 acgtcgttgggagacgtttcgggacctaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 13318285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 13435929 - 13436128
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |        || | ||||||||||||||||||     
T  13435929 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 13436028  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| | |||||||||||| | || ||| |||||||||| | ||| ||  ||||||||||||||||||||||||  |||| | || ||||||||| |||||    
T  13436029 acgtcattgggagacgtatcagagccaaggctgagggctggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgtt 13436128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 215
Target Start/End: Original strand, 37664762 - 37664957
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |        || | |||||||||||||||||    
T  37664762 agtttgtaggcacgacttcacggggaagacaagacgttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 37664861  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaac 215  Q
    | ||| |||||||||||||  |||||||| |||||||||  |  || ||  ||||||||||| |||||||||||| |||||   ||||||||||||    
T  37664862 tgacgtcgttgggagacgtttcggaaccaaggctgagggtgggcaggtatgcaacttgctggagatagaatcttgaaagactttactggggaaaac 37664957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 23898753 - 23898587
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| | |||||||||||| || | |        |||||||||||||||||||||| |||||||||||||| |||||    
T  23898753 agacaagacattggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacgtatcggaa 23898654  T
Q  146 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactgggga 211  Q
    |||||||||||||||| ||||||  |||||||| |||||||||||||| ||||||| | ||||||||    
T  23898653 ccatggctgagggcaggtagctatgcaacttgcttggggatagaatctcggaagactctactgggga 23898587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 18368790 - 18368989
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        || || |||| |||||||     
T  18368790 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagattctctatggagatg 18368889  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||||||||||| |||||| | ||| ||   |||||||||||||||||  ||||  |||| | |||||||||||| |||||    
T  18368890 acgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagagccttgagagactccactggggaaaacgccgtt 18368989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 22992425 - 22992588
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  22992425 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 22992524  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  22992525 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 22992588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 23632770 - 23632664
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| |    
T  23632770 gaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactc 23632671  T
Q  203 gactggg 209  Q
     ||||||    
T  23632670 tactggg 23632664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 23727094 - 23726931
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||| |    
T  23727094 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggga 23726995  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  23726994 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 23726931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 24976644 - 24976538
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| |    
T  24976644 gaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactc 24976545  T
Q  203 gactggg 209  Q
     ||||||    
T  24976544 tactggg 24976538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 57 - 200
Target Start/End: Complemental strand, 25207163 - 25207012
Alignment:
Q  57 caagacattagagtattgggcacggagtggctcgtgctacatcataga--------aatcctctttggagataacgccgttgggagacgtaccggaacca 148  Q
    ||||||||| |||||||||||||| ||||||||||||||||| | | |        |||||||||||||||||||| ||| |||||||||| | ||||||    
T  25207163 caagacattggagtattgggcacgtagtggctcgtgctacattacacattcctgggaatcctctttggagataacgtcgtcgggagacgtatcagaacca 25207064  T
Q  149 tggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
     |||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  25207063 gggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 25207012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 57 - 200
Target Start/End: Complemental strand, 25271319 - 25271168
Alignment:
Q  57 caagacattagagtattgggcacggagtggctcgtgctacatcataga--------aatcctctttggagataacgccgttgggagacgtaccggaacca 148  Q
    ||||||||| |||||||||||||| ||||||||||||||||| | | |        |||||||||||||||||||| ||| |||||||||| | ||||||    
T  25271319 caagacattggagtattgggcacgtagtggctcgtgctacattacacattcctgggaatcctctttggagataacgtcgtcgggagacgtatcagaacca 25271220  T
Q  149 tggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
     |||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  25271219 gggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 25271168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 24609045 - 24608939
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| ||| ||||| |||||||| ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| |    
T  24609045 gaaatcctctttggagatgacgtcgttgagagacgtatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactc 24608946  T
Q  203 gactggg 209  Q
     ||||||    
T  24608945 tactggg 24608939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 11556211 - 11556048
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatca--------tagaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || |        | |||||||||||||||||| ||| |||||||||||||| ||| |    
T  11556211 agacaagacattggagtattgggcacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggga 11556112  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||  |||||||||| | ||||||  |||||||||||||||||| |||||| |||| | ||||||    
T  11556111 cctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactggg 11556048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 30941430 - 30941324
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||  |||||||||| ||||||||||| || |||| |    
T  30941430 gaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactc 30941331  T
Q  203 gactggg 209  Q
     ||||||    
T  30941330 tactggg 30941324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 186
Target Start/End: Original strand, 13180101 - 13180241
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||| | |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||| |    
T  13180101 agacaagacactggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggga 13180200  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggata 186  Q
    |||||||||||||||| ||| ||  ||||| ||||||||||    
T  13180201 ccatggctgagggcaggtaggtatgcaactcgctggggata 13180241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 190
Target Start/End: Complemental strand, 33299393 - 33299249
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||| |    
T  33299393 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggga 33299294  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaat 190  Q
    ||  ||| |||||| | ||||||  ||||||||||||||||||||    
T  33299293 cctaggcggagggccggtagctatgcaacttgctggggatagaat 33299249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 33784339 - 33784176
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatca--------tagaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || |        | |||||||||||||||||| ||| |||||||||||||| ||| |    
T  33784339 agacaagacattggagtattgggcacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggga 33784240  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||   | ||||||| | ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  33784239 cctaagttgagggccggtagctatgcaacttgctggggatagaatctcgggagactctactggg 33784176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 4e-56; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 29836222 - 29836023
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  29836222 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 29836123  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  29836122 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacccgactggggaaaacgccgtt 29836023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 28355273 - 28355467
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  28355273 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 28355372  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  28355373 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 28355467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 18716355 - 18716177
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  18716355 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 18716256  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| |||||||||||||  ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||    
T  18716255 acgtcgttgggagacgtgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagac 18716177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 31483192 - 31483393
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||||||||||    
T  31483192 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 31483291  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||| ||||||| ||||||||||||||||||   |||||||||||| |||    
T  31483292 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaatttgctggagatagaatcttggaagactttactggggaaaacgccg 31483391  T
Q  220 tt 221  Q
    ||    
T  31483392 tt 31483393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 33265621 - 33265420
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | ||||||||||||||| |    
T  33265621 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaaa 33265522  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| ||||||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||||||||||||||  ||||   |||||||||||| |||    
T  33265521 tgacgtcgttgggagacgtattggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactttactggggaaaacgccg 33265422  T
Q  220 tt 221  Q
    ||    
T  33265421 tt 33265420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 30 - 224
Target Start/End: Original strand, 12086051 - 12086253
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  12086051 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 12086150  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||||||  |||||||||||  || |||||| ||||| |   |||||||||||| |||||    
T  12086151 acgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgtt 12086250  T
Q  222 atg 224  Q
    |||    
T  12086251 atg 12086253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 44567880 - 44567680
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata---------gaaatcctctttggagat 120  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| || | |         ||||||||||||||||||    
T  44567880 tttgtaggcacgacttcacggggaagacaagacattagaatattgggcacgtagcggctcgcgctatattacacatttcttggaaatcctctttggagat 44567781  T
Q  121 aacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgt 220  Q
     ||| |||||||||||||  ||||||||||||||||| ||| ||||||  |||||||||||  |||||||||||||||||   |||||||||||| ||||    
T  44567780 gacgtcgttgggagacgtttcggaaccatggctgaggacaggtagctatgcaacttgctggaaatagaatcttggaagactttactggggaaaacgccgt 44567681  T
Q  221 t 221  Q
    |    
T  44567680 t 44567680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 15775382 - 15775288
Alignment:
Q  1 gaatgattgaaaggcatgatggttgatagtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgcta 95  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  15775382 gaatgattgaaatgcatgatggttgacagtttgtagacacgacttcacggggaagacaagacattagagtattgggcacgtggtggctcgtgcta 15775288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 19681355 - 19681156
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| |||  |||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  19681355 tttgtaggcacgacttcacggggaagacaagacatcagatcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 19681256  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||||||| |||||    
T  19681255 acgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 19681156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 183
Target Start/End: Complemental strand, 31361430 - 31361267
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  31361430 agtttgtagacacagtttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggaaatcctctttggaga 31361331  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctgggg 183  Q
    | ||| |||||||||||||| ||||||||||||||||||||| ||| ||  |||||||||||||    
T  31361330 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctgggg 31361267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 19201704 - 19201906
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||  ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||||||||||    
T  19201704 agtttgtaagcacaacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 19201803  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggaaaacccc 218  Q
    | ||| |||||||||||||  ||||||||  ||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||||||| ||    
T  19201804 tgacgtcgttgggagacgtgtcggaaccacagctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgcc 19201903  T
Q  219 gtt 221  Q
    |||    
T  19201904 gtt 19201906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 2130631 - 2130794
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||| | |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||| |    
T  2130631 agacaagacactggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggga 2130730  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| ||||||| | ||||||    
T  2130731 ccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactctactggg 2130794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 15774423 - 15774260
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| ||||||||||||||||| | |        |||||||||||||||||| ||| |||||||||||||| ||| |    
T  15774423 agacaagacattggagtattgggcacgtagtggctcgtgctacattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggga 15774324  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | ||||||    
T  15774323 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactggg 15774260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 54 - 200
Target Start/End: Original strand, 22074275 - 22074429
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| || ||||||||||| |||||||||||||| |||| |        ||||||||||||||| |||||| |||||||||||||| ||| |    
T  22074275 agacaagacattggaatattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggatataacgtcgttgggagacgtatcggga 22074374  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  22074375 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 22074429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 14570004 - 14569841
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||  |||||||||||||| |        || | |||||||||||||||||| ||| |||||||||||||| |||||    
T  14570004 agacaagacattggagtattgggcacacagtggctcgtgctatactacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 14569905  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  ||||| |||||||||||||||| ||||||| | ||||||    
T  14569904 ccatggctgagggcaggtagctatgcaactcgctggggatagaatctcggaagactctactggg 14569841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 18797558 - 18797404
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  18797558 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 18797459  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||||| ||||||  |||||||||  |||||||||||||| ||||    
T  18797458 ccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagac 18797404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 22139763 - 22139598
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||| | |||||||||||||| |||||||||||||| || | |        |||||||||||||||||||||| ||||||||||| || |||||    
T  22139763 agacaagacactggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacttatcggaa 22139664  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactgggga 211  Q
    ||||| |||||||||| ||||||  |||||||||||||| ||||||| ||||||| | ||||||||    
T  22139663 ccatgactgagggcaggtagctatacaacttgctggggacagaatctcggaagactctactgggga 22139598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 56 - 209
Target Start/End: Complemental strand, 33249210 - 33249049
Alignment:
Q  56 acaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaacc 147  Q
    |||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||| |||    
T  33249210 acaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcgggacc 33249111  T
Q  148 atggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    | |||||||||| | ||||||  |||||||||||||||||||||||||||||| | ||||||    
T  33249110 aaggctgagggccggtagctatgcaacttgctggggatagaatcttggaagactctactggg 33249049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 19694908 - 19694802
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| ||| ||||| |||||||| ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| |    
T  19694908 gaaatcctctttggagatgacgtcgttgagagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactc 19694809  T
Q  203 gactggg 209  Q
     ||||||    
T  19694808 tactggg 19694802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 198
Target Start/End: Complemental strand, 16260730 - 16260635
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaag 198  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||| |||||||||| ||||||  |||||||||||||||||||||| |||||    
T  16260730 gaaatcctctttggagataacgtcgttgggagacttatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaag 16260635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 198
Target Start/End: Original strand, 19654746 - 19654841
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaag 198  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||| |||||||||| ||||||  |||||||||||||||||||||| |||||    
T  19654746 gaaatcctctttggagataacgtcgttgggagacttatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaag 19654841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 21341533 - 21341697
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  21341533 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 21341632  T
Q  146 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  |||||||| || ||||||||||| ||||||| | ||||||    
T  21341633 ccatggctgagggcaggtagctatgcaacttgcttgaggatagaatctcggaagactctactggg 21341697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 9361502 - 9361304
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |        || |  |||||||||||||||||     
T  9361502 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttgaaaatcctctttggagatg 9361403  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| ||||||| |||||| ||| ||||| ||||||||| | ||| ||   |||| |||||||||||| |||||  |||| | || ||||||||| |||||    
T  9361402 acgtcgttgggggacgtatcgg-accatagctgagggccggtaggtatgtaactggctggggatagagtcttgagagactccaccggggaaaacgccgtt 9361304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 27602333 - 27602439
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||| | ||| |||||||||||||| ||||||||||||||||||||| ||||||  |||||||||  |||||||||||||| |||| |    
T  27602333 gaaatcctctttggagctgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagactc 27602432  T
Q  203 gactggg 209  Q
     ||||||    
T  27602433 tactggg 27602439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 19910587 - 19910676
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 192  Q
    |||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||  |||||||||| |||||||||||    
T  19910587 gaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatct 19910676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 24335034 - 24334835
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||| |||     
T  24335034 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatg 24334935  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||||||  || ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  24334934 acgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagaccccactggggaaaacgccgtt 24334835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 28109362 - 28109564
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  28109362 agtttgtaggcacgacttcaccgggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 28109461  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc-gactggggaaaacccc 218  Q
    | ||| |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||| ||    
T  28109462 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctaaacaacttgctggagatagaatcttggaaaaccctgactggggaaaacgcc 28109561  T
Q  219 gtt 221  Q
    |||    
T  28109562 gtt 28109564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 18232050 - 18231851
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  18232050 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 18231951  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  18231950 acgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 18231851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 17978352 - 17978551
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  17978352 tttgtaggcacgacttcacggggaaaacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 17978451  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  17978452 acgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 17978551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 6536144 - 6536343
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| || | |        ||||||||||||| ||||     
T  6536144 tttgtaggcacgacttcacggggaagacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatg 6536243  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||   |||||||||||| |||||    
T  6536244 acgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 6536343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 10649928 - 10649730
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  10649928 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 10649829  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||| |  |||||||||||| |||||    
T  10649828 acgtcgttgggagacgtttcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttggaaga-cttactggggaaaacgccgtt 10649730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 5589755 - 5589949
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| || | |        |||||||||||||||||    
T  5589755 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtgactcgtgctatattacacattcttggaaatcctctttggaga 5589854  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||| | ||||||||||||||||||| ||||||||||||    
T  5589855 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtaggtatgcaacttgctagagatagaatcttggaagacctgactggggaaaa 5589949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 214
Target Start/End: Complemental strand, 5717915 - 5717721
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  5717915 agtttgtaggcacggcttcacggggaaggcaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 5717816  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  5717815 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 5717721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 214
Target Start/End: Complemental strand, 5728825 - 5728631
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  5728825 agtttgtaggcacggcttcacggggaaggcaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 5728726  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  5728725 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 5728631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 5763543 - 5763737
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  5763543 agtttgtaggcacggcttcacggggaaggcaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 5763642  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  5763643 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 5763737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 11103783 - 11103972
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  11103783 agtttgtagacacagtttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 11103882  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    | ||| |||||||||||||| ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | ||||||    
T  11103883 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactggg 11103972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 29658366 - 29658560
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgcta-------cat-catagaaatcctctttggaga 119  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||       ||| | | |||||||||||||||||    
T  29658366 agtttgtaggcgcgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggaga 29658465  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||   |||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  29658466 tgacgtcgttgggagacgtgttggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 29658560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 209
Target Start/End: Complemental strand, 5473825 - 5473638
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  5473825 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 5473726  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||| ||  ||||| |||||||||||||||| ||||||| | ||||||    
T  5473725 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctactggg 5473638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 18285780 - 18285967
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  18285780 tttgtaggcacgacttcacggggaagacgagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatg 18285879  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | ||||||    
T  18285880 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactggg 18285967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 18301081 - 18301268
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  18301081 tttgtaggcacgacttcacggggaagacgagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatg 18301180  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | ||||||    
T  18301181 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactggg 18301268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 31029667 - 31029854
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    |||||||  |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  31029667 tttgtaggtacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 31029766  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||| |||||||||||||| |||||||| |||||||||||| ||||||  |||||||||||||||||||||| ||||||| | ||||||    
T  31029767 acgtcgttgggagacgtatcggaaccacggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactggg 31029854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 30 - 209
Target Start/End: Complemental strand, 32445988 - 32445801
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgcta-------cat-catagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||       ||| | | |||||||||||||| |||     
T  32445988 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggtgatg 32445889  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||| |||||||||||||  ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | ||||||    
T  32445888 acgtcgttgggagacgtgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactggg 32445801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 30 - 211
Target Start/End: Original strand, 4340100 - 4340289
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  4340100 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 4340199  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactgggga 211  Q
    ||| |||||||||||||| |||| ||| |||||||||||| ||| ||  ||||||||||||||||||||||||| |||| | ||||||||    
T  4340200 acgtcgttgggagacgtatcggagccaaggctgagggcaggtaggtatgcaacttgctggggatagaatcttgggagactctactgggga 4340289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 5020571 - 5020370
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  5020571 agtttgtagacacagtttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggaaatcctctttggaga 5020472  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||| ||||||||| ||||||||||| ||| ||  ||||||||||||||||||||||||  ||||   |||||||||||| |||    
T  5020471 tgacgtcgttgggagacgtatcggaaccatagctgagggcaggtagatatgcaacttgctggggatagaatcttgagagactttactggggaaaacgccg 5020372  T
Q  220 tt 221  Q
    ||    
T  5020371 tt 5020370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 17970281 - 17970481
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | ||||||||||||||||||     
T  17970281 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 17970380  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggaaaaccccgt 220  Q
    ||| ||||||||||| ||  |||||||||||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||||||| ||||    
T  17970381 acgtcgttgggagacatattggaaccatggctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgt 17970480  T
Q  221 t 221  Q
    |    
T  17970481 t 17970481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 47030314 - 47030114
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| || | |        ||||||||||||| ||||     
T  47030314 tttgtaggcacgacttcacggggaagacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatg 47030215  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaac-ttgctggggatagaatcttggaagacccgactggggaaaaccccgt 220  Q
    ||| |||||||||||| | ||||||||||||||||||||| ||||||  |||| ||||||| |||||||||||||||||| | |||||||||||| ||||    
T  47030214 acgtcgttgggagacgcatcggaaccatggctgagggcaggtagctatgcaactttgctggagatagaatcttggaagactccactggggaaaacgccgt 47030115  T
Q  221 t 221  Q
    |    
T  47030114 t 47030114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 22864265 - 22864464
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| |||||||||| |||||||||||||| | ||||||||||||||| |||||||||||||| || | |        ||||||||||||| ||||     
T  22864265 tttgtaggcacgacttcatggggaagacaagacgtcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatg 22864364  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||| ||||   |||||||||||| |||||    
T  22864365 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgggagactttactggggaaaacgccgtt 22864464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 22879324 - 22879523
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| |||||||||| |||||||||||||| | ||||||||||||||| |||||||||||||| || | |        ||||||||||||| ||||     
T  22879324 tttgtaggcacgacttcatggggaagacaagacgtcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatg 22879423  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||| ||||   |||||||||||| |||||    
T  22879424 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgggagactttactggggaaaacgccgtt 22879523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 28346029 - 28345830
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgcta--------catcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        | || | ||||||||||||||||||     
T  28346029 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacaccttcttggaaatcctctttggagatg 28345930  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||||||| |||||    
T  28345929 acgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 28345830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 209
Target Start/End: Complemental strand, 4630617 - 4630430
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgcta-------cat-catagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||       ||| | | |||||||||||||| |||     
T  4630617 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggtgatg 4630518  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||| |||||||||||||  ||||||||||||||||||||  ||||||  |||||||||||||||||||||| ||||||| | ||||||    
T  4630517 acgtcgttgggagacgtgtcggaaccatggctgagggcatgtagctatgcaacttgctggggatagaatctcggaagactctactggg 4630430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 38 - 194
Target Start/End: Complemental strand, 4423746 - 4423582
Alignment:
Q  38 cacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgtt 129  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| ||||    
T  4423746 cacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgtt 4423647  T
Q  130 gggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 194  Q
    ||||||||||  |||||||||||||||||||| ||| ||  ||||||||||||||||||||||||    
T  4423646 gggagacgtattggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttg 4423582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 5602714 - 5602913
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  5602714 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 5602813  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||||||| |||||    
T  5602814 acgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 5602913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 28 - 214
Target Start/End: Complemental strand, 32297491 - 32297297
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        || ||||||| ||||||    
T  32297491 agtttgtagacacagtttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggaga 32297392  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||| |||||||||||| |||||| | ||| ||  ||||| ||||| ||||||||||||||||||| ||||||||||||    
T  32297391 tgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgcaactcgctggagatagaatcttggaagacctgactggggaaaa 32297297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 20570255 - 20570456
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||| ||||||    
T  20570255 agtttgtaggcacgacttcacgggggagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggaga 20570354  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||| |||||||||||| |||| | | ||| ||   |||||||||||||||||||||||  |||| | |||||||||||| |||    
T  20570355 tgacgtcgttgggagacgtatcggaaccatggccgaggaccggtaggtatgtaacttgctggggatagaatcttgagagactccactggggaaaacgccg 20570454  T
Q  220 tt 221  Q
    ||    
T  20570455 tt 20570456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 16404193 - 16404392
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |        || | |||||||||| |||||||     
T  16404193 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatg 16404292  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| ||||||| |||||| |||| ||| |||||||||||| ||| ||  ||||||||||||||||||||||||  |||||  || ||||||||| |||||    
T  16404293 acgtcgttgggggacgtatcggagccaaggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagacctcaccggggaaaacgccgtt 16404392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 31957857 - 31958056
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |        || | ||||||||||||||||||     
T  31957857 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 31957956  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    |||  ||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||||||| |||||    
T  31957957 acgttgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacaccgtt 31958056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 51788880 - 51788681
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| |||  |||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  51788880 tttgtaggcacgacttcacggggaagacaagacatcagatcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 51788781  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||||||| |||||    
T  51788780 acgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 51788681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 48472768 - 48472590
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |        || | ||||||||||||||||||     
T  48472768 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 48472669  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| |||||||||||||  ||| |||  |||||||||| | ||||||  ||||||||||||||||||||||||| ||||    
T  48472668 acgtcgttgggagacgtttcgggacctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagac 48472590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 18249578 - 18249377
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||| ||||||    
T  18249578 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggaga 18249479  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| ||||||| |||||| |||||||||||| |||||| | ||| ||   ||||||||||||||||| |||||  |||| | || ||||||||| |||    
T  18249478 tgacgtcgttgggggacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagactccaccggggaaaacgccg 18249379  T
Q  220 tt 221  Q
    ||    
T  18249378 tt 18249377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 19701229 - 19701064
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||| ||||||||||||||||| |||||||||||| |||||    
T  19701229 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcttctttggagataacgccattgggagacgtatcggaa 19701130  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactgggga 211  Q
    ||||| |||||||||| ||||||  |||||||||||||||||||||| ||||||| | ||||||||    
T  19701129 ccatgactgagggcaggtagctatacaacttgctggggatagaatctcggaagactctactgggga 19701064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 4728438 - 4728275
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  4728438 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 4728339  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | ||||||    
T  4728338 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactggg 4728275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 5658946 - 5658783
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| |||||    
T  5658946 agacaagacattggagtattgggcacgtagtggctcgtgctatattacaccttcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 5658847  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  5658846 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 5658783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 6208707 - 6208544
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  6208707 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 6208608  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | ||||||    
T  6208607 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactggg 6208544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 20072871 - 20072693
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  20072871 tttgtaggcacgacatcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 20072772  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| |||||||||||||  ||| |||  |||||||||| | ||||||  ||||||||||||||||||||||||| ||||    
T  20072771 acgtcgttgggagacgtttcgggacctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagac 20072693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 21681580 - 21681406
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        || ||||||| ||||||    
T  21681580 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggaga 21681481  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 194  Q
    | ||| |||||||||||||| |||||||||||| |||||| | ||| ||   ||||||||||||||||| |||||    
T  21681480 tgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagagtcttg 21681406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 10403012 - 10402811
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | | |        || ||||||| ||||||    
T  10403012 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggaga 10402913  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||| |||||||||||| | |||| | ||| ||   ||||||||||||||||| |||||  |||||| || ||||||||| |||    
T  10402912 tgacgtcgttgggagacgtatcggaaccatggccgggggccggtaggtatgtaacttgctggggatagagtcttgagagaccccaccggggaaaacgccg 10402813  T
Q  220 tt 221  Q
    ||    
T  10402812 tt 10402811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 15886222 - 15886328
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||  || ||||||||||||||||||| ||||||| |    
T  15886222 gaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatctcggaagactc 15886321  T
Q  203 gactggg 209  Q
     ||||||    
T  15886322 tactggg 15886328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 18058080 - 18057917
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||| |    
T  18058080 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggga 18057981  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  18057980 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 18057917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 18337436 - 18337273
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    ||||| |||||| |||||||||||||| |||||||||||||| || |||        |||||||||||||||||| ||| |||||||||||||  |||||    
T  18337436 agacaggacattggagtattgggcacgtagtggctcgtgctatattatactttcctggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 18337337  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    || ||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | ||||||    
T  18337336 ccctggctgagggcaggtagctacgcaacttgctggggatagaatcttgggagactctactggg 18337273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 22381028 - 22381191
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    ||||| |||||| |||||||||||||| |||||||||||||| || |||        |||||||||||||||||| ||| |||||||||||||  |||||    
T  22381028 agacaggacattggagtattgggcacgtagtggctcgtgctatattatactttcctggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 22381127  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  22381128 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 22381191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 29142202 - 29142365
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        ||||||||||| |||||| ||| |||||||||||||| |||||    
T  29142202 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctcttcggagatgacgtcgttgggagacgtatcggaa 29142301  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  29142302 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 29142365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 8218485 - 8218284
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||||||||||  ||||||||||||| |        || | |||||||||| ||||||    
T  8218485 agtttgtaggcacgacttcacggggaagacaaggcgttagagtattgggcacgtggtggctcgtgctatattacacattcttggaaatcctctatggaga 8218386  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||| |||||||||||| |||||| | ||| ||   |||||||||| |||||| |||||  |||| | |||||||||||| |||    
T  8218385 tgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggagatagagtcttgagagactccactggggaaaacgccg 8218286  T
Q  220 tt 221  Q
    ||    
T  8218285 tt 8218284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 16422962 - 16422854
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| ||  |||||||| ||||||||||||| ||||||| |    
T  16422962 gaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagttatgcaacttgcaggggatagaatctcggaagactc 16422863  T
Q  203 gactgggga 211  Q
     ||||||||    
T  16422862 tactgggga 16422854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 28028131 - 28027930
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| || ||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||        || | ||||||||||| |||||    
T  28028131 agtttgtaggcatgacttcacggggaagacaagacattagagtaatgggcaagtagtggctcgtgctacattacacattcttggaaatcctcttcggaga 28028032  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||  ||| |||  |||||||||| | ||| ||  ||||||||||||||||||||||||  ||||   |||||||||||| |||    
T  28028031 tgacgtcgttgggagacgtgtcgggacctaggctgagggccggtaggtatgcaacttgctggggatagaatcttgagagactttactggggaaaacgccg 28027932  T
Q  220 tt 221  Q
    ||    
T  28027931 tt 28027930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 8282965 - 8283071
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| |    
T  8282965 gaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactc 8283064  T
Q  203 gactggg 209  Q
     ||||||    
T  8283065 tactggg 8283071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 15368078 - 15367923
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| ||||||||| ||||||||| |        |||||||||||||||||||||| | |||||||||||| |||||    
T  15368078 agacaagacattggagtattgggcacgtagtggctcgcgctacatcacacattcttggaaatcctctttggagataacgtcattgggagacgtatcggaa 15367979  T
Q  146 ccatggctgagggcagatagc-taatcaacttgctggggatagaatcttggaagac 200  Q
    |||||| ||||||| | |||| ||  |||||||||||||||||||||| |||||||    
T  15367978 ccatggttgagggcgggtagcatatgcaacttgctggggatagaatctcggaagac 15367923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 192
Target Start/End: Original strand, 15734564 - 15734710
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||| |    
T  15734564 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggga 15734663  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatct 192  Q
    |||||| ||||||||| ||||||  ||||||||||||||||||||||    
T  15734664 ccatggttgagggcaggtagctatgcaacttgctggggatagaatct 15734710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 4690430 - 4690324
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| |    
T  4690430 gaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactc 4690331  T
Q  203 gactggg 209  Q
     ||||||    
T  4690330 tactggg 4690324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 4790079 - 4790242
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| | |||||||||||| || | |        ||||||||||| |||||| ||| |||||||||||||| |||||    
T  4790079 agacaagacattggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctcttcggagatgacgtcgttgggagacgtatcggaa 4790178  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  |||||||||  |||||||||||||| |||| | ||||||    
T  4790179 ccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagactctactggg 4790242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 200
Target Start/End: Original strand, 16617915 - 16618070
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| ||| |||||||||| |||| |        ||||||||||||||||||| || |||||||||||| | |||||    
T  16617915 agacaagacattggagtattgggcacgtagtagctcgtgctatatcacacattcttggaaatcctctttggagatatcgtcgttgggagacgcatcggaa 16618014  T
Q  146 ccatggctgagggcagatagc-taatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||| | |||| ||  |||||||||||||||||||||| |||||||    
T  16618015 ccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaagac 16618070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 22041242 - 22041087
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| ||| |||||||||| |||| |        ||||||||||||||||||| || |||||||||||| | |||||    
T  22041242 agacaagacattggagtattgggcacgtagtagctcgtgctatatcacacattcttggaaatcctctttggagatatcgtcgttgggagacgcatcggaa 22041143  T
Q  146 ccatggctgagggcagatagc-taatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||| | |||| ||  |||||||||||||||||||||| |||||||    
T  22041142 ccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaagac 22041087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 35887572 - 35887409
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcataga--------aatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    ||||||||||||  ||||||||||||| |||||||||||||| || | | |        |||||||||||||||| ||| |||||||||||||  |||||    
T  35887572 agacaagacattgaagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 35887473  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  |||||||||||||||||| |||||| |||| | ||||||    
T  35887472 ccatggctgagggcaggtagctatgcaacttgctggggatagagtcttgggagactctactggg 35887409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 16599471 - 16599406
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgcta 95  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16599471 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgcta 16599406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 7080084 - 7080022
Alignment:
Q  33 gtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgcta 95  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7080084 gtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgcta 7080022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 7079981 - 7079877
Alignment:
Q  105 aatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccga 204  Q
    |||| ||| ||| ||||||| |||||||||||||  |||||||| |||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |    
T  7079981 aatcttctctggggataacgtcgttgggagacgtgtcggaaccaaggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactcta 7079882  T
Q  205 ctggg 209  Q
    |||||    
T  7079881 ctggg 7079877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 4e-56; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 3789337 - 3789138
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  3789337 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 3789238  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  3789237 acgtcgttgggagacgtttcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgtt 3789138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 13929959 - 13930158
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  13929959 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 13930058  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||| ||||| ||||||||| ||| |||||    
T  13930059 acgtcgttgggagacgtatcggaaccatggctgagggcaggtagctaaacaacttgctggagatagaatcttgggagacctgactggggagaacgccgtt 13930158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 19409832 - 19410031
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||| |||     
T  19409832 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatg 19409931  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||||||  || ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  19409932 acgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagaccccactggggaaaacgccgtt 19410031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 37932271 - 37932072
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  37932271 tttgtaggcacgacttcacggggaagacaagacatcagagcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 37932172  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  37932171 acgtcgttgggagacgtttcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgtt 37932072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 21670519 - 21670720
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  21670519 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 21670618  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||| |||    
T  21670619 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaacgccg 21670718  T
Q  220 tt 221  Q
    ||    
T  21670719 tt 21670720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 16822686 - 16822885
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  16822686 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 16822785  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  16822786 acgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 16822885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 16898794 - 16898595
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  16898794 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 16898695  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  16898694 acgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 16898595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 253998 - 254192
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  253998 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 254097  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  254098 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatacaacttgctggagatagaatcttggaagacctgactggggaaaa 254192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 28 - 214
Target Start/End: Complemental strand, 34298045 - 34297851
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  34298045 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 34297946  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||| ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| ||||    
T  34297945 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaaaaa 34297851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 32056646 - 32056447
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  32056646 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 32056547  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||| ||  ||||||||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  32056546 acgtcgttgggagatgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 32056447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 9343333 - 9343527
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| || | |        |||||||||||||||||    
T  9343333 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtgactcgtgctatattacacattcttggaaatcctctttggaga 9343432  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  9343433 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 9343527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 214
Target Start/End: Complemental strand, 16168374 - 16168180
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  16168374 agtttgtaggcacggcttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 16168275  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  16168274 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 16168180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 214
Target Start/End: Complemental strand, 27810599 - 27810405
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  27810599 agtttgtaggcacggcttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 27810500  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  27810499 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 27810405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 37679244 - 37679438
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        || ||||||| ||||||    
T  37679244 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggaga 37679343  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||| ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  37679344 tgacgtcgttgggagacgtatcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 37679438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 37694509 - 37694703
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        || ||||||| ||||||    
T  37694509 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggaga 37694608  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||| ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  37694609 tgacgtcgttgggagacgtatcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 37694703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 37945211 - 37945405
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  37945211 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 37945310  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||| ||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  37945311 tgacgtcgttgggagatgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 37945405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 39896963 - 39896764
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| | ||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  39896963 tttgtaggcgcgacttcacggggaagacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 39896864  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||   |||||||||||| |||||    
T  39896863 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttggaagactttactggggaaaacgccgtt 39896764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 39045228 - 39045423
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgcta-------cat-catagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||       ||| | | |||||||||||||||||    
T  39045228 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggaga 39045327  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaac-ttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  |||| ||||||| ||||||||||||||||||| ||||||||||||    
T  39045328 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaactttgctggagatagaatcttggaagacctgactggggaaaa 39045423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 12593716 - 12593516
Alignment:
Q  22 gttgatagtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctt 113  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | | |        || |||||||     
T  12593716 gttgacagtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctcta 12593617  T
Q  114 tggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaa 213  Q
    ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||  ||||||||||| ||||||||||||||||||| |||||||||||    
T  12593616 tggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgcaacttgctggagatagaatcttggaagacctgactggggaaa 12593517  T
Q  214 a 214  Q
    |    
T  12593516 a 12593516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 11628533 - 11628732
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  11628533 tttgtaggcacgacttcacggggaagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 11628632  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||  |||| | || ||||||||| |||||    
T  11628633 acgtcgttgggagacgtgtcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgtt 11628732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 27397205 - 27397051
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||| |        |||||||||||||||||||||| |||||||||||||| |||||    
T  27397205 agacaagacattggagtattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggagataacgtcgttgggagacgtatcggaa 27397106  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  27397105 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 27397051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 31883165 - 31882987
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  31883165 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 31883066  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| |||||||||||||| | |||||| |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||    
T  31883065 acgtcgttgggagacgtatcagaaccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagac 31882987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 37384549 - 37384371
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | ||| || ||| |||||||     
T  37384549 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaattcttctgtggagatg 37384450  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| |||||||    
T  37384449 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagac 37384371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 21696561 - 21696726
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgc-----taca---tcatagaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| ||||||||||||     ||||   || | ||||||||||||||||||||||||||||||||||||| |||||    
T  21696561 agacaagacattggagtattgggcacgtagtggctcgtgcaatattacacattcctggaaatcctctttggagataacgccgttgggagacgtatcggaa 21696660  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactgggga 211  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| ||||| | | ||||||||    
T  21696661 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctactgggga 21696726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 34161737 - 34161536
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgc-----taca---tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     ||||   || | |||||||||||||||||    
T  34161737 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggaga 34161638  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||| | || ||| |||||||||| | ||| ||  ||||||||||||||||||||||||  |||| | || ||||||||| |||    
T  34161637 tgacgtcgttgggagacgtatcagagccaaggctgagggctggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccg 34161538  T
Q  220 tt 221  Q
    ||    
T  34161537 tt 34161536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 34268295 - 34268460
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgcta-------cat-catagaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| ||||||||||||||       ||| | | |||||||||||||||||||||| |||||||||||||| |||||    
T  34268295 agacaagacattggagtattgggcacgtagtggctcgtgctatgttacacattcctggaaatcctctttggagataacgtcgttgggagacgtatcggaa 34268394  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactgggga 211  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | ||||||||    
T  34268395 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggga 34268460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 22921492 - 22921691
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  22921492 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 22921591  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||||||| |||||    
T  22921592 acgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 22921691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 34868528 - 34868329
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  34868528 tttgtagacacgacttcacggggaagacaagacatcagatcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 34868429  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||||||| |||||    
T  34868428 acgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 34868329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 194
Target Start/End: Original strand, 12709972 - 12710144
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| || | |        ||||||||||||||||||     
T  12709972 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggcccgtgctatattacacattcttggaaatcctctttggagatg 12710071  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 194  Q
    ||| ||||||||||||||  |||||||||||||||||||| ||| ||  | ||||||||||||||||||||||    
T  12710072 acgtcgttgggagacgtattggaaccatggctgagggcaggtaggtatgccacttgctggggatagaatcttg 12710144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 3790567 - 3790473
Alignment:
Q  1 gaatgattgaaaggcatgatggttgatagtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgcta 95  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  3790567 gaatgattgaaatgcatgatggttgacagtttgtagacacgacttcacggggaagacaagacattagagtattgggcacgtggtggctcgtgcta 3790473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 27123394 - 27123216
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |        || | ||||||||||||||||||     
T  27123394 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 27123295  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| |||||||||||||  ||| |||  |||||||||| | ||||||  ||||||||||||||||||||||||| ||||    
T  27123294 acgtcgttgggagacgtttcgggacctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagac 27123216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 27783119 - 27782918
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||| ||||||    
T  27783119 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggaga 27783020  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | | | |||||| ||||||| |||||||||||| |||||| | ||| ||   |||||||||||||||||||||||  |||| | |||||| ||||| |||    
T  27783019 tgatgtcgttggtagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagaatcttgagagactccactgggaaaaacgccg 27782920  T
Q  220 tt 221  Q
    ||    
T  27782919 tt 27782918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 200
Target Start/End: Original strand, 19449784 - 19449939
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatca--------tagaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| ||||||||| |||| ||||        |||||||||||||||||||||||| |||||||||||||| |||||    
T  19449784 agacaagacattggagtattgggcacgtagtggctcgcgctatatcacacattcttagaaatcctctttggagataacgtcgttgggagacgtatcggaa 19449883  T
Q  146 ccatggctgagggcagatagc-taatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||| | |||| ||  |||||||||||||||||||||| |||||||    
T  19449884 ccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaagac 19449939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 23117644 - 23117481
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| ||||||||| |||| |||||    
T  23117644 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggaggcgtatcggaa 23117545  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | ||||||    
T  23117544 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactggg 23117481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 20844706 - 20844600
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||| ||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| |    
T  20844706 gaaatcatctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactc 20844607  T
Q  203 gactggg 209  Q
     ||||||    
T  20844606 tactggg 20844600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 40240419 - 40240245
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  | | |        || ||||||| ||||||    
T  40240419 agtttgtaggcacgacttcacggggaagacaagacgttagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggaga 40240320  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 194  Q
    | ||| |||||||||||||| |||||||||||| |||||| | ||| ||   ||||||||||||||||| |||||    
T  40240319 tgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagagtcttg 40240245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 28889045 - 28888939
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| |    
T  28889045 gaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactc 28888946  T
Q  203 gactggg 209  Q
     ||||||    
T  28888945 tactggg 28888939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 27427902 - 27428000
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaat-caacttgctggggatagaatcttggaagac 200  Q
    ||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||| || |||||||||||||| ||||||| |||||||    
T  27427902 gaaatcctccttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagcttatgcaacttgctggggacagaatctcggaagac 27428000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 12662282 - 12662175
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacc 201  Q
    |||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||| ||  |||||||| || ||||||||||| |||||||     
T  12662282 gaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtaggtatgcaacttgcttgaggatagaatctcggaagact 12662183  T
Q  202 cgactggg 209  Q
    | ||||||    
T  12662182 ctactggg 12662175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 31868181 - 31868344
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||| |    
T  31868181 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggga 31868280  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||  |||||||||| | ||| ||   |||||| |||||||||||||| ||||||| | ||||||    
T  31868281 cctaggctgagggccggtaggtatgaaacttgatggggatagaatctcggaagactctactggg 31868344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 1e-55; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 26508976 - 26509154
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| ||||||||||||||||| | |        |||||||||||||||||||||| |||||||||||||| |||||    
T  26508976 agacaagacattggagtattgggcacgtagtggctcgtgctacattacacattcctggaaatcctctttggagataacgtcgttgggagacgtatcggaa 26509075  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgttatg 224  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  26509076 ccatggctgagggcaggtagctaatcaacttgctgggggtagaatcttggaagacccgactggggataacgccgttatg 26509154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 26663153 - 26663347
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  26663153 agtttgtaggcatgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 26663252  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||| ||||||||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  26663253 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 26663347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 26678345 - 26678539
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  26678345 agtttgtaggcatgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 26678444  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||| ||||||||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  26678445 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 26678539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 3452152 - 3451936
Alignment:
Q  1 gaatgattgaaaggcatgatggttgatagtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--- 97  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||| |||  |||||||||| |||||||||||||| |       
T  3452152 gaatgattgaaatgcatgatggttgacagtttgtagacacgacttcacggggaagccaagacatcagatcattgggcacgtagtggctcgtgctatatta 3452053  T
Q  98 -----tcatagaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 192  Q
         || | |||||||||||||||||| ||| ||||||||||||||||||| ||| |||||||||||| ||| ||  ||||||||||||||||||||||    
T  3452052 cacattcttggaaatcctctttggagatgacgtcgttgggagacgtaccggagccaaggctgagggcaggtaggtatgcaacttgctggggatagaatct 3451953  T
Q  193 tggaagacccgactggg 209  Q
     ||||||| | ||||||    
T  3451952 cggaagactctactggg 3451936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 16744761 - 16744955
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  16744761 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 16744860  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  16744861 tgacgtcgttgggagacgtgacggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 16744955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 31083864 - 31084066
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  31083864 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 31083963  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggaaaacccc 218  Q
    | ||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||  |||| | || ||||||||| ||    
T  31083964 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgcc 31084063  T
Q  219 gtt 221  Q
    |||    
T  31084064 gtt 31084066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 26268300 - 26268527
Alignment:
Q  1 gaatgattgaaaggcatgatggttgatagtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--- 97  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |       
T  26268300 gaatgattgaaatgcatgatggttgacagtttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatatta 26268399  T
Q  98 -----tcatagaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 192  Q
         || | |||||||||||||||||| ||| |||||||||||||  ||| |||  ||||||||||||  || ||  ||||||||||| ||||||||||    
T  26268400 cacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcgg-acctaggctgagggcaggcaggtatgcaacttgctggagatagaatct 26268498  T
Q  193 tggaagacccgactggggaaaaccccgtt 221  Q
    ||||||||   |||||||||||| |||||    
T  26268499 tggaagactttactggggaaaacgccgtt 26268527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 2780118 - 2779929
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||| |||    
T  2780118 agtttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttgaaga 2780019  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    | |||||||||||||||||| ||||||||||||||||||||| |||  |  |||||||||||||||||||||| ||||||| | ||||||    
T  2780018 tgacgccgttgggagacgtatcggaaccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctactggg 2779929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 26442139 - 26441938
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||| ||||||    
T  26442139 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggaga 26442040  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||| |||||||||||| |||||| | ||| ||  ||||||||||||||||||||||||  |||||| || ||||||||| |||    
T  26442039 tgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgcaacttgctggggatagaatcttgagagaccccaccggggaaaacgccg 26441940  T
Q  220 tt 221  Q
    ||    
T  26441939 tt 26441938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 26313106 - 26313306
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  26313106 tttgtaggcaagacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 26313205  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggaaaaccccgt 220  Q
    ||| |||||||||||||| ||||||||||||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||||||| ||||    
T  26313206 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgt 26313305  T
Q  221 t 221  Q
    |    
T  26313306 t 26313306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 31557647 - 31557847
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||| || | |        ||||||||||||||||||     
T  31557647 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtagctcgtgctatattacaccttcttggaaatcctctttggagatg 31557746  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggaaaaccccgt 220  Q
     || |||||||||||||| ||||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||   |||||||||||| ||||    
T  31557747 gcgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtaaacaacttgcttggggatagaatcttggaagactttactggggaaaacgccgt 31557846  T
Q  221 t 221  Q
    |    
T  31557847 t 31557847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 4206268 - 4206069
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  4206268 tttgtaggcacgacttcacggggaagacaagacattagagtgttgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatg 4206169  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| ||||||||||||| ||||||||||||| |||||||| ||| ||  ||||||||||||||||||||||||  |||| | || ||||||||| |||||    
T  4206168 acgtcgttgggagacgtgccggaaccatggccgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgtt 4206069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 214
Target Start/End: Complemental strand, 26596551 - 26596356
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || | |        |||||||||||||||||    
T  26596551 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcatgctatattacacattcttggaaatcctctttggaga 26596452  T
Q  120 taacgccgttgggagacgtaccggaacca-tggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  |||||||| | ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  26596451 tgacgtcgttgggagacgtgtcggaaccaatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 26596356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 31130791 - 31130616
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  31130791 agtttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 31130692  T
Q  120 taacgccgttgggagacgtaccggaacca-tggctgagggcagatagctaatcaacttgctggggatagaatcttg 194  Q
    | ||| ||||||||||||||  ||||||| ||||||||||||| ||||||  ||||||||||||||||||||||||    
T  31130691 tgacgtcgttgggagacgtattggaaccaatggctgagggcaggtagctatgcaacttgctggggatagaatcttg 31130616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 45394112 - 45393913
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcataga--------aatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||| || | | |        ||||||||||||||||     
T  45394112 tttgtaggcacgacttcacggggaagacaagacatcagaatattgggcacgtagtggctcatgctatattacacattcttgggaatcctctttggagatg 45394013  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| ||||| |||||||| ||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||   |||||||||||| |||||    
T  45394012 acgtcgttgagagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 45393913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 4138486 - 4138687
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||||||||||    
T  4138486 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 4138585  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||  ||||||||| |||||||||||  || ||  ||||||||||| ||||||||||||  || | | |||||||||||| |||    
T  4138586 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggcaggtatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccg 4138685  T
Q  220 tt 221  Q
    ||    
T  4138686 tt 4138687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 22148762 - 22148573
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||||||||||    
T  22148762 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 22148663  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    | ||| |||||||||||||| ||||||| ||||||||||||| |||  |  ||||| ||||||||||| |||| ||||||| | ||||||    
T  22148662 tgacgtcgttgggagacgtatcggaaccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctactggg 22148573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 22152989 - 22152800
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||||||||||    
T  22152989 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 22152890  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    | ||| |||||||||||||| ||||||| ||||||||||||| |||  |  ||||| ||||||||||| |||| ||||||| | ||||||    
T  22152889 tgacgtcgttgggagacgtatcggaaccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctactggg 22152800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 22208904 - 22208715
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||||||||||    
T  22208904 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 22208805  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    | ||| |||||||||||||| ||||||| ||||||||||||| |||  |  ||||| ||||||||||| |||| ||||||| | ||||||    
T  22208804 tgacgtcgttgggagacgtatcggaaccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctactggg 22208715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 11447781 - 11447582
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| |||  |||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  11447781 tttgtaggcacgacttcacggggaagacaagacatcagatcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 11447682  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||||||| |||||    
T  11447681 acgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 11447582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 26519700 - 26519501
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| |||  |||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  26519700 tttgtaggcacgacttcacggggaagacaagacatcagatcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 26519601  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||||||| |||||    
T  26519600 acgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 26519501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 16048181 - 16048027
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||||| | |||||||||||||| |||||    
T  16048181 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataaagtcgttgggagacgtatcggaa 16048082  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  16048081 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 16048027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 24585776 - 24585978
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacatt-agagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggag 118  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||    
T  24585776 agtttgtaggcacgactttacggggaagacaagacatttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggag 24585875  T
Q  119 ataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaacccc 218  Q
    || ||| |||||||||||||  ||||||||| ||||| ||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||||||| ||    
T  24585876 atgacgtcgttgggagacgtgtcggaaccatagctgaaggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgcc 24585975  T
Q  219 gtt 221  Q
    |||    
T  24585976 gtt 24585978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 200
Target Start/End: Original strand, 39206407 - 39206585
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |        || | ||||||||||||||||||     
T  39206407 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 39206506  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| |||||||||||||  ||| |||  |||||||||| | ||||||  |||||||||| |||||||||||||| ||||    
T  39206507 acgtcgttgggagacgtttcgggacctaggctgagggccggtagctatgcaacttgctgaggatagaatcttgggagac 39206585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 45738173 - 45737995
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |        || | ||||||||||||||||||     
T  45738173 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 45738074  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| |||||||||||||  ||| |||  |||||||||| | ||||||  ||| ||||||||||||||||||||| ||||    
T  45738073 acgtcgttgggagacgtttcgggacctaggctgagggccggtagctatgcaatttgctggggatagaatcttgggagac 45737995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 5154931 - 5154768
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  5154931 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 5154832  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  5154831 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 5154768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 16443329 - 16443426
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  16443329 gaaatcctctttggagataacgtcgttgggagacgtatcggagccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 16443426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 11418070 - 11418233
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatca--------tagaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    ||||||||||||||||||||||||||| |||||||||||||| || |        | |||||||||||||||||| ||| |||||||||||||| ||| |    
T  11418070 agacaagacattagagtattgggcacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggga 11418169  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||  |||||||||| | ||||||  ||||||||||||||||||||||||| |||| | ||||||    
T  11418170 cctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagactctactggg 11418233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 16511773 - 16511879
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| |    
T  16511773 gaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactc 16511872  T
Q  203 gactggg 209  Q
     ||||||    
T  16511873 tactggg 16511879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 2161419 - 2161257
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||  ||| |||||||||||||  |||||    
T  2161419 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagacgacgtcgttgggagacgtgtcggaa 2161320  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  2161319 ccatggctgagggcag-tagctatgcaacttgctggggatagaatctcgggagactctactggg 2161257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 5140578 - 5140744
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | | |        || ||||||| ||||||    
T  5140578 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggaga 5140677  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggata 186  Q
    | ||| | |||||||||||| |||||||||||| |||||| | ||| ||   |||||||||||||||    
T  5140678 tgacgtcattgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggata 5140744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 10848453 - 10848299
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| ||||||||| |||| |||| |        |||||||||||||||||||||| | |||||||||||| |||||    
T  10848453 agacaagacattggagtattgggcacgtagtggctcgcgctatatcacacattcttggaaatcctctttggagataacgtcattgggagacgtatcggaa 10848354  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||| | | ||||  | |||||||||||| ||||||| |||||||    
T  10848353 ccatggctgagggcgggttgctacgcgacttgctggggacagaatctcggaagac 10848299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 5165232 - 5165078
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||| |    
T  5165232 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggga 5165133  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||  |||||||||| | ||||||  |||||||||||||||||| |||||| ||||    
T  5165132 cctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagac 5165078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 10910274 - 10910380
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| |||  ||||||||||||| ||| ||||||||||||||||| ||||||  |||||||||| ||||||||||| || |||| |    
T  10910274 gaaatcctctttggagatgacgttgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactc 10910373  T
Q  203 gactggg 209  Q
     ||||||    
T  10910374 tactggg 10910380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 1e-52; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 54840298 - 54840097
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  54840298 agtttgtaggcacgacttcacggggaagacaagacattggattattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggaga 54840199  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||  ||||||||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  54840198 tgacgtcgttgggagacgtttcggaaccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacccgactggggaaaacgccg 54840099  T
Q  220 tt 221  Q
    ||    
T  54840098 tt 54840097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 31119870 - 31120069
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  31119870 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 31119969  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  31119970 acgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 31120069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 20331793 - 20331987
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  20331793 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 20331892  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    | ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  20331893 tgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 20331987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 21976609 - 21976410
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| |||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  21976609 tttgtaggcacgacttcacggggaagacaagatatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 21976510  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  21976509 acgtcgttgggagacgtgtcggaaccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 21976410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 30 - 214
Target Start/End: Original strand, 27156686 - 27156878
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  27156686 tttgtaggcacgacttcacggagaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 27156785  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  27156786 acgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaa 27156878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 14752876 - 14753063
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  14752876 tttgtaggcacgacttcacggggaagacgagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatg 14752975  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | ||||||    
T  14752976 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactggg 14753063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 36323695 - 36323884
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| || | |        ||||||||| |||||||    
T  36323695 agtttgtaggcacgacttcacggggaagacaagacattagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctccttggaga 36323794  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    | ||| |||||||||||||| ||||||||||||||||||||| |||  |  |||||||||||||||||||||| ||||||| | ||||||    
T  36323795 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctactggg 36323884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 36337904 - 36338093
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| || | |        ||||||||| |||||||    
T  36337904 agtttgtaggcacgacttcacggggaagacaagacattagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctccttggaga 36338003  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    | ||| |||||||||||||| ||||||||||||||||||||| |||  |  |||||||||||||||||||||| ||||||| | ||||||    
T  36338004 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctactggg 36338093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 6576744 - 6576552
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctcttt-ggag 118  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||| ||||    
T  6576744 agtttgtaggcacgacttcatggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctcttttggag 6576645  T
Q  119 ataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactgggga 211  Q
    || ||| |||||||||||||| ||||||||||||||||||||| ||  ||  |||||||||||||||||||||| ||||||| | ||||||||    
T  6576644 atgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaagtatgcaacttgctggggatagaatctcggaagactccactgggga 6576552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 40098964 - 40099192
Alignment:
Q  1 gaatgattgaaaggcatgatggttgatagtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--- 97  Q
    ||||| ||| || ||||||  |||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |       
T  40098964 gaatgcttgtaatgcatgactgttggtattttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatatta 40099063  T
Q  98 -----tcatagaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 192  Q
         || | |||||||||||||||||| ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||    
T  40099064 cacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatct 40099163  T
Q  193 tggaagacccgactggggaaaaccccgtt 221  Q
    ||  || | | |||||||||||| |||||    
T  40099164 tgagaggctccactggggaaaacgccgtt 40099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 211
Target Start/End: Complemental strand, 5012787 - 5012597
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattggg-cacggagtggctcgtgctacatcata--------gaaatcctctttggagat 120  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||| || | |        ||||||||||||||||||    
T  5012787 tttgtaggcacgacttcacggggaagacaagacattagagtgttggggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagat 5012688  T
Q  121 aacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactgggga 211  Q
     ||| |||||||||||||  |||||||| |||||||||||| ||| ||  ||||||||||||||||||||||||  |||||||||||||||    
T  5012687 gacgtcgttgggagacgtgtcggaaccacggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagacccgactgggga 5012597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 5701434 - 5701256
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  5701434 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 5701335  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| |||||||||||||| | |||||| |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||    
T  5701334 acgtcgttgggagacgtatcagaaccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagac 5701256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 39857520 - 39857342
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | ||| || ||| |||||||     
T  39857520 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaattcttctgtggagatg 39857421  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| |||||||    
T  39857420 acgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagac 39857342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 28 - 194
Target Start/End: Original strand, 18794001 - 18794175
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||||||||||    
T  18794001 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 18794100  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 194  Q
    | ||| |||||||||||||| |||||||||||| |||||| | ||| ||   ||||||||||||||||| |||||    
T  18794101 tgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagagtcttg 18794175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 33667161 - 33667360
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| |||  |||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  33667161 tttgtaggcacgacttcacggggaagacaagacatcagatcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 33667260  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||||||| |||||    
T  33667261 acgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 33667360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 15234700 - 15234546
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||||||| |||||||||||||| |||||    
T  15234700 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacgtatcggaa 15234601  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||||| |||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  15234600 ccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 15234546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 14105449 - 14105250
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        || ||||||| |||||||     
T  14105449 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatg 14105350  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||||||||||| |||||  | ||| ||   ||||||||||||||||| |||||  |||| | |||||||||||| |||||    
T  14105349 acgtcgttgggagacgtatcggaaccatggccgagggtcggtaggtatgtaacttgctggggatagagtcttgagagactccactggggaaaacgccgtt 14105250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 24585755 - 24585918
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||| ||| |    
T  24585755 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggga 24585854  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| || |||| | ||||||    
T  24585855 ccatggctgagggcagatagctatgcaacttgctggggatagaatctcgggagactctactggg 24585918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24813728 - 24813822
Alignment:
Q  1 gaatgattgaaaggcatgatggttgatagtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgcta 95  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  24813728 gaatgattgaaatgcatgatggttgacagtttgtagacacgacttcatggggaagacaagacattagagtattgggcacgtggtggctcgtgcta 24813822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 30760669 - 30760470
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| |||  |||||||||| |||||||||||||| || | |        |||||||| |||||||||     
T  30760669 tttgtaggcacgacttcacggggaagacaagacatcagatcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctttttggagatg 30760570  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||||||| |||||    
T  30760569 acgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 30760470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 54 - 200
Target Start/End: Original strand, 15276010 - 15276164
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||| |        ||||||||||||||||||||||  ||||||||||||| |||||    
T  15276010 agacaagacattggagtattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggagataacgttgttgggagacgtatcggaa 15276109  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||||| ||||||  | |||||||||||| ||||||| |||||||    
T  15276110 ccatggctgagggcaggtagctatgcgacttgctggggacagaatctcggaagac 15276164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 54 - 200
Target Start/End: Original strand, 15379622 - 15379776
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| || ||||||||||| |||||||||||||| |||| |        ||||||||||||||| |||||| |||||||||||||| ||| |    
T  15379622 agacaagacattggaatattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggatataacgtcgttgggagacgtatcggga 15379721  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  15379722 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 15379776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 1907149 - 1906984
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||||||| | |||||||||||| |||||    
T  1907149 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcattgggagacgtatcggaa 1907050  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactgggga 211  Q
    ||||| |||||||||| ||||||  |||||||||||||||||||||| ||||| | | ||||||||    
T  1907049 ccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctactgggga 1906984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 30 - 209
Target Start/End: Complemental strand, 24119547 - 24119359
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata---------gaaatcctctttggagat 120  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |          |||||||||||||||||    
T  24119547 tttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggaaaatcctctttggagat 24119448  T
Q  121 aacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
     ||  |||||||||||||| ||| |||| ||||||||||   ||| ||  |||||||||||||||||||||| ||||||| | ||||||    
T  24119447 gacatcgttgggagacgtatcgggaccaaggctgagggccagtagatatgcaacttgctggggatagaatctcggaagactctactggg 24119359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 33 - 209
Target Start/End: Original strand, 34182320 - 34182504
Alignment:
Q  33 gtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagataacg 124  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |        || | |||||||||||||||||| |||    
T  34182320 gtaggcacgacttcacggggaagacaagacattagagtattgggcacatagtggctcgtgctatattacacattcttggaaatcctctttggagatgacg 34182419  T
Q  125 ccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
     |||||||||||||  ||| |||  |||||||||| | ||||||  |||||||||||||||||| |||||| |||| | ||||||    
T  34182420 tcgttgggagacgtgtcgggacctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactggg 34182504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 14671814 - 14671717
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  14671814 gaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 14671717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 17019853 - 17019747
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| |    
T  17019853 gaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactc 17019754  T
Q  203 gactggg 209  Q
     ||||||    
T  17019753 tactggg 17019747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 24814661 - 24814726
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgcta 95  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24814661 tttgtaggcacgactttacggggaagacaagacattagagtattgggcacgtagtggctcgtgcta 24814726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 4e-50; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 51645122 - 51644921
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||| |||    
T  51645122 agtttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaaga 51645023  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||   |||||||||||| |||    
T  51645022 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccg 51644923  T
Q  220 tt 221  Q
    ||    
T  51644922 tt 51644921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 10951992 - 10951791
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| || | |        |||||||||||||||||    
T  10951992 agtttgtaggcacgactttacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 10951893  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||  |||||||| |||||||||||| ||||||| ||||||||||| ||||||||||||  || | | |||||||||||| |||    
T  10951892 tgacgtcgttgggagacgtgtcggaaccacggctgagggcaggtagctaaacaacttgctggagatagaatcttgagaggctccactggggaaaacgccg 10951793  T
Q  220 tt 221  Q
    ||    
T  10951792 tt 10951791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 10969543 - 10969369
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| || | |        |||||||||||||||||    
T  10969543 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtgactcgtgctatattacacattcttggaaatcctctttggaga 10969444  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 194  Q
    | ||| |||||||||||||| ||||||||||||||||||||| ||| ||  | ||||||||||||||||||||||    
T  10969443 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgccacttgctggggatagaatcttg 10969369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 3648047 - 3647846
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | | |        || ||||||| ||||||    
T  3648047 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggaga 3647948  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||| ||||||||||||||||||||| ||| ||   ||||||||||||||||| |||||  |||| | || ||||||||| |||    
T  3647947 tgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgtaacttgctggggatagagtcttgagagactccaccggggaaaacgccg 3647848  T
Q  220 tt 221  Q
    ||    
T  3647847 tt 3647846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 28591981 - 28591780
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |        || | |||||||||||||||||    
T  28591981 agtttgtaggcacgacttcacggggaagacaagacattagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 28591882  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccg 219  Q
    | ||| |||||||||||||| |||||||||||| |||||| | ||| ||   |||||||| |||||||| |||||  |||| | |||||||||||| |||    
T  28591881 tgacgtcgttgggagacgtatcggaaccatggccgagggctggtaggtatgtaacttgctagggatagagtcttgagagactccactggggaaaacgccg 28591782  T
Q  220 tt 221  Q
    ||    
T  28591781 tt 28591780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 28156603 - 28156425
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |        || | ||||||||||||||||||     
T  28156603 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 28156504  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| |||||||||||||  ||| |||  |||||||||| | ||||||  ||||||||||||||||||||||||| ||||    
T  28156503 acgtcgttgggagacgtttcgggacctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagac 28156425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 200
Target Start/End: Original strand, 41786694 - 41786872
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  41786694 tttgtaggcacgacttcacggggaagacaagacgtcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 41786793  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| |||||||||||||| |||||||| ||||||||||||  || ||  ||||||||||| |||||||||||| |||||    
T  41786794 acgtcgttgggagacgtatcggaaccacggctgagggcaggcaggtatgcaacttgctggagatagaatcttgaaagac 41786872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 54 - 192
Target Start/End: Original strand, 20333801 - 20333947
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||||||| |||||||||||||| |||||    
T  20333801 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagataacgtcgttgggagacgtatcggaa 20333900  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatct 192  Q
    ||||||| |||||||| ||||||  ||||||||||||||||||||||    
T  20333901 ccatggccgagggcaggtagctatgcaacttgctggggatagaatct 20333947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 16201415 - 16201580
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||| ||||| || | |        ||||||||||||||||||||| ||||||||||||||| |||||    
T  16201415 agacaagacattggagtattgggcacgtagtggctcatgctatattacacattcctggaaatcctctttggagataacaccgttgggagacgtatcggaa 16201514  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactgggga 211  Q
    ||||| |||||||||| ||||||  ||||||||||||| |||||||| ||||||| | ||||||||    
T  16201515 ccatgactgagggcaggtagctatgcaacttgctgggggtagaatctcggaagactctactgggga 16201580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 14692301 - 14692464
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  14692301 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 14692400  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||||||||||| |||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  14692401 ccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 14692464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 14694983 - 14695146
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  14694983 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 14695082  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||||||||||| |||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  14695083 ccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 14695146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 14697667 - 14697830
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  14697667 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 14697766  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||||||||||| |||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  14697767 ccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 14697830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 14700348 - 14700511
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        |||||||||||||||||| ||| |||||||||||||  |||||    
T  14700348 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 14700447  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||||||||||| |||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  14700448 ccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 14700511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 21891191 - 21891297
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||  || ||||||||||||||||||| ||||||| |    
T  21891191 gaaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatctcggaagactc 21891290  T
Q  203 gactggg 209  Q
     ||||||    
T  21891291 tactggg 21891297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 20467601 - 20467504
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||||||||| || ||||||   ||||||||||||||||||||| |||||||    
T  20467601 gaaatcctctttggagataacgtcgttgggagacatatcggaaccatggctgagggtaggtagctatgtaacttgctggggatagaatctcggaagac 20467504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 13769614 - 13769562
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacg 80  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  13769614 agtttgtaggcacgacttcacggggaagacaatacattagagtattgggcacg 13769562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 30 - 224
Target Start/End: Complemental strand, 14838 - 14636
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  14838 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 14739  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| ||||||||||||||||||||| ||||||  |||||||||||  || |||||| ||||| |   |||||||||||| |||||    
T  14738 acgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgtt 14639  T
Q  222 atg 224  Q
    |||    
T  14638 atg 14636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 30 - 214
Target Start/End: Complemental strand, 2553 - 2361
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  2553 tttgtaggcacgacttcacggggaagacaagacattagagcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 2454  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaa 214  Q
    |||  ||||||||||||  ||||||||  ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||||||    
T  2453 acgttgttgggagacgtgtcggaaccaaagctgagggcaggtagatatacaacttgctggagatagaatcttggaagacctgactggggaaaa 2361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 12923 - 12769
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| ||||||||||||||||| | |        |||||||||||||||||||||| |||||||||||||| |||||    
T  12923 agacaagacattggagtattgggcacgtagtggctcgtgctacattacacatccctggaaatcctctttggagataacgtcgttgggagacgtatcggaa 12824  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| ||| |||||||| ||||||   |||||| || ||||||||||| |||||||    
T  12823 ccacggccgagggcaggtagctatgaaacttgttgcggatagaatctcggaagac 12769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 200
Target Start/End: Original strand, 8301 - 8479
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  8301 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 8400  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    ||| |||||||||||||| | |||||| |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||    
T  8401 acgtcgttgggagacgtatcagaaccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagac 8479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 2537 - 2736
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || | |        ||||||||||||||||||     
T  2537 tttgtaggcacgacttcacggggaagacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatg 2636  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||  ||||||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||||||| |||||    
T  2637 acgtcgttgggagacgtgtcggaaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 2736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 18582 - 18505
Alignment:
Q  144 aaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    |||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||||||| |||||    
T  18582 aaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 18505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 10817 - 10615
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata---------gaaatcctctttggag 118  Q
    ||||||||  ||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||| || | |         ||||||||||||||||    
T  10817 agtttgtaagcacgacttcacagggaagacaagacattagaatattgggcacgtagtggctcgtgctatattacacatttcttggaaatcctctttggag 10718  T
Q  119 ataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaacccc 218  Q
    || ||| |||||||||||||  ||||||||||||||||| ||| ||||||  |||||||||||  |||||||||||||||||   |||||||||||| ||    
T  10717 atgacgtcgttgggagacgtttcggaaccatggctgaggacaggtagctatgcaacttgctggaaatagaatcttggaagactttactggggaaaacgcc 10618  T
Q  219 gtt 221  Q
    |||    
T  10617 gtt 10615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 34087 - 33981
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    |||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||| ||||||  |||||||||| ||||||||||| || |||| |    
T  34087 gaaatcctctttggagatgacgtcgttgggagacgtatcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactc 33988  T
Q  203 gactggg 209  Q
     ||||||    
T  33987 tactggg 33981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 12914 - 12725
Alignment:
Q  28 agtttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctaca--------tcatagaaatcctctttggaga 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |        || | |||||||||||||||||    
T  12914 agtttgtaggcacgacttcacggggaagacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaga 12815  T
Q  120 taacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    | ||| |||||||||||||  ||| |||  |||||||||| | ||||||  |||||||||||||||||| |||||| |||| | ||||||    
T  12814 tgacgtcgttgggagacgtgtcgggacctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactggg 12725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 26011 - 26108
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||| ||||||| |||||||    
T  26011 gaaatcctctttggagataacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctaagcaacttgctggggaaagaatctcggaagac 26108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 28164 - 28012
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgcta-----cat-catagaaatcctctttggagataacgccgttgggagacgtaccggaacc 147  Q
    |||||||||||| |||||||||||||| ||||||||||  ||     ||| | | |||||||||||||||||||||| |||||||||||||| |||||||    
T  28164 agacaagacattggagtattgggcacgtagtggctcgttatatcacacattcttggaaatcctctttggagataacgtcgttgggagacgtatcggaacc 28065  T
Q  148 atggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||||||||||| ||||||   ||||||||||||||||||||| |||||||    
T  28064 atggctgagggcaggtagctatataacttgctggggatagaatctcggaagac 28012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 16472 - 16273
Alignment:
Q  30 tttgtagacacgacttcacggggaagacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagata 121  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||||||||| ||||||||||| || || | |        ||||||||||||||||||     
T  16472 tttgtaggcacgacttcacggggaagacaaaacatcagagtattgggcacgtagtggctcgtgttatattacacattcttggaaatcctctttggagatg 16373  T
Q  122 acgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggaaaaccccgtt 221  Q
    ||| |||||||||||||| |||||||||||| |||||| | ||| ||   |||| |||||||||||| |||||  |||| | || ||||||||| |||||    
T  16372 acgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaactggctggggatagagtcttgagagactccaccggggaaaacgccgtt 16273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 24415 - 24521
Alignment:
Q  103 gaaatcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc 202  Q
    ||||| |||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| |    
T  24415 gaaattctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactc 24514  T
Q  203 gactggg 209  Q
     ||||||    
T  24515 tactggg 24521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 644 - 490
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||| ||||||||| || | |        |||||||||||||||||||||| |||||||||||||| | |||    
T  644 agacaagacattggagtattgggcacgtagtgtctcgtgctatattacacattcccggaaatcctctttggagataacgtcgttgggagacgtatcagaa 545  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 200  Q
    |||||| ||||||||| ||||||  |||| ||||||||||||||||| |||||||    
T  544 ccatggttgagggcaggtagctatgcaacctgctggggatagaatctcggaagac 490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0792 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0792
Description:

Target: scaffold0792; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 4000 - 4163
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        || ||||||||||||||| ||| |||||||||||||| ||| |    
T  4000 agacaagacattggagtattgggcacgcagtggctcgtgctatattacacattcttggacatcctctttggagatgacgtcgttgggagacgtatcggga 4099  T
Q  146 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    |||||||| ||||||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  4100 ccatggctaagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 4163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 209
Target Start/End: Original strand, 40064 - 40171
Alignment:
Q  104 aaatcctctttggagataacgccgttgggagacgtaccggaaccatggctga-gggcagatagctaat-caacttgctggggatagaatcttggaagacc 201  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||| ||| |||| |||||||||||||||||||||| |||||||     
T  40064 aaatcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgaggggcaggtagttaatgcaacttgctggggatagaatctcggaagact 40163  T
Q  202 cgactggg 209  Q
    | ||||||    
T  40164 ctactggg 40171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 9045 - 9209
Alignment:
Q  54 agacaagacattagagtattgggcacggagtggctcgtgctacatcata--------gaaatcctctttggagataacgccgttgggagacgtaccggaa 145  Q
    |||||||||||| |||||||||||||| |||||||||||||| || | |        || ||||||||||||||| ||| |||||||||||||  |||||    
T  9045 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggacatcctctttggagatgacgtcgttgggagacgtgtcggaa 9144  T
Q  146 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggg 209  Q
    |||||||||||||||| |||| |  |||||||| || ||||||||||| ||||||| | ||||||    
T  9145 ccatggctgagggcaggtagccatgcaacttgcttgaggatagaatctcggaagactctactggg 9209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 6807 - 6751
Alignment:
Q  153 tgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 209  Q
    ||||||||| ||||||  |||||||||||||||||||||| ||||||| | ||||||    
T  6807 tgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactggg 6751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University