View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6865A_low_224 (Length: 239)
Name: NF6865A_low_224
Description: NF6865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6865A_low_224 |
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Alignment Details
Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 18518114 - 18518038
Alignment:
| Q |
150 |
caacatcagcagaagatgaagtccatttaacaaccccatgaagctcgactaacaacaccctcaaattagatgatgtc |
226 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18518114 |
caacatcaacagaagatgaagtccatttaacaaccccatgaagctcgactaacaacaccctcaaattagatgatgtc |
18518038 |
T |
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