View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6865A_low_231 (Length: 237)
Name: NF6865A_low_231
Description: NF6865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6865A_low_231 |
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Alignment Details
Target: chr1 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 44 - 224
Target Start/End: Original strand, 14730288 - 14730469
Alignment:
| Q |
44 |
ttcttttacaaaaatttaaatatcagcatacactctattgttttggattatgtaatcaaaaaacataacaatcaatatttgagtatataatcaaaaacag |
143 |
Q |
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| T |
14730288 |
ttcttttacaaaaatttaaatgttagcacacaccgtattgttttggattatgtaatcaaaaaacataataatcaatttttgagtatataatcaaaaatag |
14730387 |
T |
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| Q |
144 |
ttcaatacttat-aaaaaataaattaaacaacaaatgatataacttgtttgagttgtttgacgatattggtttgagaccatg |
224 |
Q |
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| T |
14730388 |
tacaatacttataaaaaaataaattaaacaacaaattatataacccatttgagttgtttgacggtgttggtttgagaccatg |
14730469 |
T |
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