View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6865A_low_242 (Length: 232)
Name: NF6865A_low_242
Description: NF6865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6865A_low_242 |
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Alignment Details
Target: chr8 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 28 - 195
Target Start/End: Original strand, 31798691 - 31798862
Alignment:
| Q |
28 |
tggctttgtcataagattttcatggaccatccattatttcgtgattgaacttgaatcttcaaattgcctacttgaattcctatt--nnnnnnnnnnctac |
125 |
Q |
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| T |
31798691 |
tggctttgtcataagattttcatggaccatccattatttcgtgattgaacttgaatctacaaattgcctacttgaattcctattaaaaaaaaaaaactac |
31798790 |
T |
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| Q |
126 |
ttgaattatat--aaacaaaatcttgcaagaattgttccactgagcaatcgaactagcaattaaaatcaatt |
195 |
Q |
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| T |
31798791 |
ttgaattatataaaaaaaaaatcttgcaagaattgttctactgagcaatcgaactagtaattaaaatcaatt |
31798862 |
T |
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