View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6865A_low_301 (Length: 224)

Name: NF6865A_low_301
Description: NF6865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6865A_low_301
NF6865A_low_301
[»] chr8 (43 HSPs)
chr8 (7-221)||(2776299-2776513)
chr8 (139-219)||(9695631-9695711)
chr8 (130-218)||(7046335-7046423)
chr8 (142-217)||(12491343-12491418)
chr8 (142-221)||(36545147-36545226)
chr8 (142-221)||(36565446-36565525)
chr8 (142-221)||(18125171-18125250)
chr8 (150-216)||(18474173-18474239)
chr8 (130-218)||(79041-79132)
chr8 (131-204)||(30748472-30748545)
chr8 (41-117)||(10079978-10080054)
chr8 (142-221)||(36395154-36395234)
chr8 (143-219)||(45419237-45419313)
chr8 (142-221)||(39946855-39946934)
chr8 (142-221)||(40813322-40813401)
chr8 (83-180)||(17491767-17491864)
chr8 (130-219)||(29700276-29700365)
chr8 (142-221)||(11523928-11524008)
chr8 (45-117)||(38178335-38178407)
chr8 (154-221)||(2796555-2796622)
chr8 (164-219)||(33666726-33666781)
chr8 (142-221)||(42854209-42854288)
chr8 (149-219)||(32043590-32043660)
chr8 (161-219)||(41444550-41444608)
chr8 (141-210)||(38689547-38689616)
chr8 (50-122)||(39967579-39967651)
chr8 (146-221)||(8879649-8879724)
chr8 (49-128)||(35643685-35643764)
chr8 (173-215)||(7103274-7103316)
chr8 (150-204)||(35643814-35643868)
chr8 (52-117)||(4011218-4011283)
chr8 (150-219)||(25985519-25985587)
chr8 (130-195)||(30559717-30559782)
chr8 (148-204)||(1549588-1549644)
chr8 (152-204)||(6483272-6483324)
chr8 (168-216)||(12611538-12611586)
chr8 (163-219)||(13171875-13171931)
chr8 (152-204)||(16917199-16917251)
chr8 (146-218)||(23023244-23023316)
chr8 (133-217)||(36143367-36143451)
chr8 (156-212)||(39051149-39051205)
chr8 (167-219)||(42493536-42493588)
chr8 (142-182)||(42584408-42584448)
[»] chr7 (69 HSPs)
chr7 (141-219)||(19262637-19262715)
chr7 (142-221)||(13859213-13859292)
chr7 (142-221)||(49029274-49029353)
chr7 (130-216)||(12966025-12966111)
chr7 (151-219)||(28020964-28021032)
chr7 (145-221)||(34869418-34869494)
chr7 (142-221)||(2885927-2886006)
chr7 (142-217)||(12841480-12841555)
chr7 (142-221)||(31005221-31005300)
chr7 (142-221)||(33072950-33073029)
chr7 (142-217)||(35906406-35906481)
chr7 (142-221)||(38607002-38607081)
chr7 (142-221)||(43281672-43281751)
chr7 (142-221)||(45836685-45836764)
chr7 (133-219)||(36514403-36514489)
chr7 (142-221)||(37617942-37618022)
chr7 (142-221)||(6374866-6374945)
chr7 (150-213)||(7220750-7220813)
chr7 (142-221)||(11593958-11594037)
chr7 (142-221)||(33350011-33350090)
chr7 (131-218)||(40830224-40830311)
chr7 (142-221)||(44855377-44855456)
chr7 (142-221)||(46356061-46356140)
chr7 (130-216)||(28628126-28628212)
chr7 (142-220)||(36869449-36869527)
chr7 (141-219)||(40169649-40169727)
chr7 (154-219)||(38920794-38920859)
chr7 (130-219)||(39811957-39812046)
chr7 (130-219)||(42187470-42187559)
chr7 (150-219)||(47848674-47848743)
chr7 (151-219)||(27021906-27021974)
chr7 (142-218)||(31682807-31682883)
chr7 (142-218)||(39906575-39906651)
chr7 (145-216)||(22349623-22349694)
chr7 (142-221)||(29650382-29650461)
chr7 (153-219)||(7189442-7189508)
chr7 (161-219)||(30914692-30914750)
chr7 (142-219)||(43491308-43491385)
chr7 (134-219)||(45558362-45558447)
chr7 (130-194)||(6420683-6420747)
chr7 (149-209)||(25826682-25826742)
chr7 (131-219)||(28858044-28858132)
chr7 (146-189)||(24549902-24549945)
chr7 (152-219)||(30632968-30633035)
chr7 (142-212)||(7273046-7273116)
chr7 (153-219)||(36136764-36136830)
chr7 (149-203)||(41948532-41948586)
chr7 (134-219)||(5335920-5336005)
chr7 (139-212)||(14593772-14593845)
chr7 (141-218)||(18605350-18605427)
chr7 (141-218)||(18637563-18637640)
chr7 (141-218)||(18650997-18651074)
chr7 (150-219)||(43282408-43282477)
chr7 (130-195)||(48202895-48202960)
chr7 (49-117)||(12966151-12966219)
chr7 (133-201)||(30144793-30144861)
chr7 (149-217)||(36101977-36102045)
chr7 (156-212)||(40008636-40008692)
chr7 (134-178)||(43791638-43791682)
chr7 (130-201)||(38135405-38135476)
chr7 (58-117)||(45601611-45601670)
chr7 (142-221)||(46014386-46014464)
chr7 (58-128)||(1569140-1569210)
chr7 (142-204)||(36652007-36652069)
chr7 (161-219)||(46989903-46989961)
chr7 (149-219)||(48736111-48736181)
chr7 (139-216)||(25579279-25579356)
chr7 (150-195)||(35713719-35713764)
chr7 (143-211)||(37595685-37595753)
[»] chr5 (38 HSPs)
chr5 (146-219)||(31636129-31636202)
chr5 (142-221)||(4496382-4496461)
chr5 (142-221)||(24178508-24178587)
chr5 (149-219)||(33667216-33667286)
chr5 (142-221)||(1287784-1287863)
chr5 (141-219)||(18351111-18351190)
chr5 (142-221)||(38684965-38685044)
chr5 (142-220)||(16347583-16347661)
chr5 (145-221)||(28977067-28977143)
chr5 (141-220)||(15168791-15168870)
chr5 (145-219)||(1275264-1275338)
chr5 (130-204)||(42199301-42199375)
chr5 (139-219)||(2712944-2713024)
chr5 (142-218)||(3301845-3301921)
chr5 (130-182)||(11675547-11675599)
chr5 (142-221)||(12492589-12492671)
chr5 (151-219)||(15489706-15489774)
chr5 (149-221)||(34273025-34273097)
chr5 (142-221)||(2075679-2075758)
chr5 (132-219)||(10082934-10083021)
chr5 (142-221)||(14665712-14665791)
chr5 (146-212)||(1525651-1525717)
chr5 (142-216)||(20456776-20456850)
chr5 (142-216)||(43475243-43475317)
chr5 (130-196)||(4026528-4026594)
chr5 (130-216)||(14749310-14749396)
chr5 (130-212)||(21952364-21952446)
chr5 (150-212)||(36123405-36123466)
chr5 (161-218)||(11002647-11002704)
chr5 (149-218)||(28676596-28676665)
chr5 (44-117)||(42199528-42199601)
chr5 (130-219)||(418178-418269)
chr5 (151-215)||(37065533-37065597)
chr5 (150-218)||(43558040-43558108)
chr5 (150-217)||(17213079-17213146)
chr5 (49-127)||(14749432-14749510)
chr5 (130-179)||(79553-79602)
chr5 (166-219)||(14667763-14667816)
[»] chr1 (59 HSPs)
chr1 (135-216)||(38868885-38868966)
chr1 (142-221)||(1210743-1210822)
chr1 (142-221)||(34792554-34792633)
chr1 (142-218)||(51602057-51602133)
chr1 (142-221)||(8671916-8671995)
chr1 (142-221)||(15085932-15086011)
chr1 (142-221)||(22090094-22090173)
chr1 (142-221)||(30202335-30202414)
chr1 (130-216)||(5338727-5338813)
chr1 (130-219)||(52073655-52073745)
chr1 (131-219)||(43423719-43423807)
chr1 (142-221)||(696267-696346)
chr1 (142-221)||(4001660-4001739)
chr1 (142-221)||(9592732-9592811)
chr1 (132-219)||(48431601-48431688)
chr1 (142-221)||(51440970-51441049)
chr1 (149-219)||(9509318-9509388)
chr1 (130-216)||(40416374-40416460)
chr1 (130-219)||(2544599-2544688)
chr1 (149-205)||(16822234-16822290)
chr1 (133-217)||(27848001-27848085)
chr1 (130-218)||(32404719-32404807)
chr1 (133-188)||(10569263-10569318)
chr1 (142-221)||(32082950-32083029)
chr1 (150-221)||(32231167-32231238)
chr1 (149-216)||(39140523-39140590)
chr1 (130-216)||(14226022-14226108)
chr1 (132-217)||(3819051-3819136)
chr1 (130-203)||(46388392-46388465)
chr1 (142-219)||(49347598-49347675)
chr1 (139-219)||(1661430-1661510)
chr1 (130-222)||(13827763-13827855)
chr1 (142-221)||(4029120-4029199)
chr1 (142-221)||(8391770-8391849)
chr1 (140-219)||(13827920-13827999)
chr1 (142-221)||(38807876-38807955)
chr1 (142-221)||(43240584-43240663)
chr1 (149-219)||(8343070-8343140)
chr1 (142-192)||(25979436-25979486)
chr1 (130-216)||(35828743-35828829)
chr1 (153-219)||(37263331-37263397)
chr1 (41-102)||(15577568-15577629)
chr1 (130-219)||(17275196-17275285)
chr1 (41-117)||(8342952-8343028)
chr1 (151-191)||(44008616-44008656)
chr1 (150-217)||(27637846-27637913)
chr1 (140-218)||(10272260-10272338)
chr1 (46-108)||(12231509-12231571)
chr1 (165-219)||(37463101-37463155)
chr1 (141-215)||(38877547-38877621)
chr1 (153-219)||(51812525-51812591)
chr1 (169-219)||(52561843-52561893)
chr1 (163-212)||(9599620-9599669)
chr1 (150-219)||(23791857-23791926)
chr1 (150-219)||(40419639-40419708)
chr1 (154-219)||(43954199-43954264)
chr1 (45-114)||(46388514-46388583)
chr1 (45-114)||(46394958-46395027)
chr1 (49-117)||(40416506-40416574)
[»] scaffold0018 (2 HSPs)
scaffold0018 (142-221)||(31466-31545)
scaffold0018 (130-219)||(44061-44150)
[»] chr4 (70 HSPs)
chr4 (142-221)||(31960019-31960098)
chr4 (142-221)||(43433922-43434001)
chr4 (142-221)||(52569720-52569799)
chr4 (134-218)||(35555844-35555928)
chr4 (142-221)||(33227207-33227286)
chr4 (142-217)||(53707796-53707871)
chr4 (133-219)||(40018379-40018465)
chr4 (141-219)||(49738808-49738886)
chr4 (145-221)||(48622751-48622827)
chr4 (142-221)||(436227-436306)
chr4 (142-221)||(4440851-4440930)
chr4 (142-221)||(27450384-27450463)
chr4 (142-221)||(33191053-33191132)
chr4 (142-221)||(48174298-48174377)
chr4 (130-212)||(1380374-1380456)
chr4 (151-217)||(31459032-31459098)
chr4 (141-218)||(38903924-38904001)
chr4 (134-219)||(41192836-41192921)
chr4 (150-219)||(51252674-51252743)
chr4 (150-219)||(54470207-54470276)
chr4 (142-219)||(56375290-56375367)
chr4 (139-219)||(44047550-44047630)
chr4 (150-214)||(46715585-46715649)
chr4 (150-221)||(28236181-28236252)
chr4 (132-219)||(33709924-33710011)
chr4 (134-209)||(42285897-42285972)
chr4 (134-215)||(29398822-29398903)
chr4 (149-210)||(45094372-45094433)
chr4 (140-216)||(42293452-42293528)
chr4 (150-218)||(42639233-42639301)
chr4 (142-221)||(20192031-20192110)
chr4 (150-221)||(23906508-23906579)
chr4 (142-217)||(37797854-37797929)
chr4 (45-128)||(38903793-38903875)
chr4 (130-212)||(50662394-50662477)
chr4 (149-219)||(17900480-17900550)
chr4 (134-219)||(31897625-31897708)
chr4 (145-219)||(37773659-37773733)
chr4 (149-219)||(50471526-50471596)
chr4 (130-203)||(21879346-21879419)
chr4 (130-219)||(28497490-28497578)
chr4 (130-219)||(31339537-31339625)
chr4 (150-219)||(38570960-38571029)
chr4 (150-219)||(44360087-44360155)
chr4 (150-219)||(46372024-46372093)
chr4 (142-211)||(50286970-50287039)
chr4 (142-194)||(8286456-8286508)
chr4 (67-127)||(37488216-37488276)
chr4 (45-117)||(40018264-40018336)
chr4 (140-196)||(40268466-40268522)
chr4 (150-221)||(20591513-20591584)
chr4 (150-189)||(30853387-30853426)
chr4 (142-221)||(39100740-39100819)
chr4 (149-204)||(47611742-47611797)
chr4 (149-219)||(934648-934717)
chr4 (150-220)||(1793459-1793529)
chr4 (153-219)||(2588991-2589056)
chr4 (149-219)||(10209034-10209104)
chr4 (59-117)||(10209171-10209229)
chr4 (150-192)||(21214793-21214835)
chr4 (150-212)||(26356626-26356688)
chr4 (46-128)||(45569085-45569167)
chr4 (130-203)||(29182498-29182571)
chr4 (141-182)||(45176043-45176084)
chr4 (144-221)||(47265409-47265486)
chr4 (58-127)||(50680865-50680934)
chr4 (142-219)||(51421730-51421807)
chr4 (45-108)||(21879228-21879292)
chr4 (32-108)||(42293327-42293403)
chr4 (131-203)||(44860862-44860934)
[»] chr3 (57 HSPs)
chr3 (149-219)||(50960845-50960915)
chr3 (142-219)||(54128378-54128455)
chr3 (149-217)||(49503766-49503834)
chr3 (142-221)||(52138798-52138877)
chr3 (142-221)||(22071-22149)
chr3 (142-221)||(28245435-28245514)
chr3 (142-221)||(35033144-35033223)
chr3 (142-217)||(47233801-47233876)
chr3 (141-219)||(3987047-3987125)
chr3 (142-224)||(19736992-19737074)
chr3 (142-224)||(19757895-19757977)
chr3 (130-219)||(21200550-21200637)
chr3 (132-218)||(41842706-41842792)
chr3 (142-220)||(43694970-43695048)
chr3 (142-203)||(39235154-39235215)
chr3 (139-212)||(39535642-39535715)
chr3 (142-219)||(54279020-54279097)
chr3 (142-218)||(51447915-51447991)
chr3 (142-221)||(5168830-5168909)
chr3 (142-221)||(38060429-38060508)
chr3 (133-219)||(19676276-19676362)
chr3 (130-212)||(29374941-29375023)
chr3 (151-208)||(31261155-31261212)
chr3 (130-219)||(36820154-36820243)
chr3 (161-217)||(26490317-26490373)
chr3 (149-217)||(38430850-38430918)
chr3 (151-219)||(48734349-48734417)
chr3 (142-221)||(25191375-25191454)
chr3 (46-117)||(40982031-40982102)
chr3 (131-216)||(659528-659613)
chr3 (150-203)||(11581460-11581513)
chr3 (44-117)||(21200683-21200756)
chr3 (150-219)||(27917570-27917639)
chr3 (65-117)||(2340812-2340864)
chr3 (162-218)||(31337751-31337807)
chr3 (151-215)||(31454441-31454504)
chr3 (139-219)||(39600883-39600963)
chr3 (45-117)||(43308697-43308769)
chr3 (45-113)||(46431754-46431822)
chr3 (130-189)||(46431868-46431925)
chr3 (142-182)||(48508272-48508312)
chr3 (131-219)||(45289285-45289375)
chr3 (132-218)||(31208979-31209065)
chr3 (150-219)||(31453151-31453221)
chr3 (150-204)||(33272235-33272289)
chr3 (130-204)||(36303994-36304067)
chr3 (130-212)||(44443397-44443479)
chr3 (150-216)||(49841622-49841688)
chr3 (130-219)||(50249384-50249476)
chr3 (130-219)||(34719265-34719354)
chr3 (163-216)||(36868450-36868503)
chr3 (151-216)||(38850123-38850188)
chr3 (141-202)||(40981914-40981975)
chr3 (45-114)||(44443279-44443348)
chr3 (156-216)||(37227931-37227991)
chr3 (152-204)||(37351422-37351474)
chr3 (132-204)||(46140447-46140519)
[»] chr6 (25 HSPs)
chr6 (140-221)||(5258351-5258432)
chr6 (149-219)||(33084058-33084128)
chr6 (131-219)||(9593900-9593988)
chr6 (163-219)||(21870299-21870355)
chr6 (145-221)||(28085374-28085450)
chr6 (142-221)||(5631820-5631899)
chr6 (142-221)||(32755919-32755998)
chr6 (141-211)||(24665818-24665888)
chr6 (142-221)||(20427841-20427920)
chr6 (142-221)||(30031254-30031333)
chr6 (49-128)||(33997623-33997702)
chr6 (130-195)||(7150514-7150579)
chr6 (142-218)||(608158-608234)
chr6 (161-221)||(12890582-12890642)
chr6 (49-128)||(34584-34663)
chr6 (45-128)||(1747716-1747799)
chr6 (165-212)||(4948539-4948586)
chr6 (165-212)||(4955510-4955557)
chr6 (142-204)||(30679421-30679483)
chr6 (163-219)||(6641635-6641691)
chr6 (162-214)||(7513616-7513668)
chr6 (156-216)||(8364575-8364635)
chr6 (131-219)||(9749418-9749506)
chr6 (59-115)||(10617323-10617379)
chr6 (149-217)||(21352049-21352117)
[»] chr2 (45 HSPs)
chr2 (130-219)||(12141544-12141633)
chr2 (141-217)||(11017316-11017392)
chr2 (142-221)||(38452890-38452969)
chr2 (130-203)||(13240938-13241011)
chr2 (142-221)||(2610586-2610665)
chr2 (142-221)||(3866070-3866149)
chr2 (149-221)||(8180778-8180850)
chr2 (41-117)||(19235055-19235131)
chr2 (149-221)||(25834679-25834751)
chr2 (149-221)||(43238305-43238377)
chr2 (142-221)||(12734697-12734776)
chr2 (133-211)||(9647805-9647883)
chr2 (142-212)||(24583837-24583907)
chr2 (149-219)||(43752159-43752229)
chr2 (150-224)||(44437934-44438008)
chr2 (142-220)||(45367830-45367908)
chr2 (142-219)||(36183451-36183528)
chr2 (142-219)||(41763247-41763324)
chr2 (142-218)||(11992313-11992389)
chr2 (136-211)||(14197361-14197437)
chr2 (145-221)||(38429882-38429958)
chr2 (142-218)||(41197433-41197509)
chr2 (132-204)||(41858746-41858818)
chr2 (167-218)||(1456231-1456282)
chr2 (142-221)||(3243858-3243937)
chr2 (142-221)||(18424582-18424661)
chr2 (133-219)||(11412721-11412807)
chr2 (143-221)||(16097192-16097270)
chr2 (130-219)||(38434951-38435041)
chr2 (142-194)||(451853-451905)
chr2 (131-195)||(9556563-9556627)
chr2 (151-219)||(18188780-18188848)
chr2 (167-219)||(18958907-18958959)
chr2 (142-221)||(4807594-4807672)
chr2 (141-196)||(12026209-12026264)
chr2 (164-219)||(12882267-12882322)
chr2 (150-219)||(4598775-4598844)
chr2 (150-219)||(37481830-37481899)
chr2 (142-195)||(38264370-38264422)
chr2 (130-219)||(42092517-42092606)
chr2 (130-187)||(43260436-43260493)
chr2 (130-182)||(3481178-3481230)
chr2 (49-117)||(26784419-26784487)
chr2 (65-117)||(33287556-33287608)
chr2 (47-107)||(43832243-43832303)
[»] scaffold0325 (1 HSPs)
scaffold0325 (151-215)||(11802-11866)
[»] scaffold0570 (1 HSPs)
scaffold0570 (142-218)||(1153-1229)
[»] scaffold0113 (1 HSPs)
scaffold0113 (151-221)||(11810-11880)
[»] scaffold0024 (1 HSPs)
scaffold0024 (142-221)||(82719-82798)
[»] scaffold0003 (1 HSPs)
scaffold0003 (130-183)||(346966-347019)
[»] scaffold0036 (1 HSPs)
scaffold0036 (143-219)||(4477-4553)


Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 2776299 - 2776513
Alignment:
Q  7 acaatgaagccttatcccaccatcgaatgctgtctcaaatatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagtt 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2776299 acaatgaagccttatcccactatcgaatgctgtctcaaatatcatatctctatccaaatcattaatatctagatcgttcttaatcgtttttcttatagtt 2776398  T
Q  107 ttcctaggtctacatctgcctccccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacga 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2776399 ttcctaggtctacatctgcctccccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacga 2776498  T
Q  207 taggtgctaccccca 221  Q
    |||||||||||||||    
T  2776499 taggtgctaccccca 2776513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 9695711 - 9695631
Alignment:
Q  139 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  9695711 agaatctacaggacttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctactataggtgctacccc 9695631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 7046423 - 7046335
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||| |||| ||||| || ||||||| |||||||||||||| |||||||||| ||| |||||| |||||||||| ||||||||||    
T  7046423 ccttactacagaagctacgtgttttctctctacatgcccaaaccagctaagccgaggttccaccatcttttctacgattggtgctaccc 7046335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 12491343 - 12491418
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||    
T  12491343 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 12491418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 36545226 - 36545147
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||| ||||||||    
T  36545226 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgttaccccca 36545147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 36565446 - 36565525
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||| ||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  36565446 atctacgggtattctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 36565525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 18125250 - 18125171
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||  ||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  18125250 atctacgggtcttctctctacatgttcaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 18125171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 18474173 - 18474239
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||||||||| |||||| ||||||| ||||||| |||||| |||||||||||||| |||||||||||    
T  18474173 gtcttctctctacatgctcaaaccaactaagcctagtttccaccatcatttctactataggtgctac 18474239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 79132 - 79041
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgag---tttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||| | ||||||| ||||||||||  |||||||||||||||||||||| ||   |||||||||||||||||||  |||||| |||||    
T  79132 ccttactacaaaatctacaggtcttctctatacatgcccaaaccacctaagcctagtaatttctaccatcatttctactgtaggtgttaccc 79041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 30748545 - 30748472
Alignment:
Q  131 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 204  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||||||||  | ||| |||||| |||||||    
T  30748545 cttactatagaatctacaggtcttctctctacatgcccaaaccacctaagccttgattccaccatcttttctac 30748472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 10079978 - 10080054
Alignment:
Q  41 tcaaatatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    ||||||||||||| ||||||||| |||||||| |||||| | |||||||  ||||||||||||||||  ||||||||    
T  10079978 tcaaatatcatatttctatccaactcattaatctctagatctttcttaacagtttttcttatagtttctctaggtct 10080054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 36395154 - 36395234
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacct-aagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||| ||||||||||| |||||||||||||| || ||||| | ||||||||| | ||||||| ||||||||||||||||    
T  36395154 atctacaggtcttctctctacatgcccaaaccatctaaagcctattttctaccaacttttctactataggtgctaccccca 36395234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 45419313 - 45419237
Alignment:
Q  143 tctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||| |||||| |||| |||||||||||||||||||| | | ||| ||||||| ||||||| ||||||||||||||    
T  45419313 tctacaggtcttatctctacatgcccaaaccacctaagtctattttataccatcttttctactataggtgctacccc 45419237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 39946934 - 39946855
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||| |||||||| || ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  39946934 atctacaggtcttctttctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 39946855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 40813401 - 40813322
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||| | ||||||||| |||||||||||||| |||| || | ||||||||| | ||||||| ||||||||||||||||    
T  40813401 atctacagatcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctaccccca 40813322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 17491767 - 17491864
Alignment:
Q  83 ttcttaatcgtttttcttatagttttcctaggtctacatctgcctccccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaag 180  Q
    |||||||| |||| ||||| |||||| |||||||| | | |||||| |||||||| | ||| ||  ||||||||||| |||| |||||||||||||||    
T  17491767 ttcttaatagtttctcttacagtttttctaggtcttcctgtgcctctccttactacaaaatgtataggtcttctctctacatacccaaaccacctaag 17491864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 29700365 - 29700276
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| |||||| |  |||||| |||| | |||||||||||||||||||| | ||||  ||||| ||||||| ||||||||||||||    
T  29700365 ccttactacagaatccaatggtcttttctctatatgcccaaaccacctaagccaactttcctccatcttttctactataggtgctacccc 29700276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 11523928 - 11524008
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacct-aagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| || ||||| | |  |||||| | ||||||| ||||||||||||||||    
T  11523928 atctacgggtcttctctctacatgcccaaaccatctaaagcctattaactaccaacttttctactataggtgctaccccca 11524008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 38178335 - 38178407
Alignment:
Q  45 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    ||||||||||||||||||| |||||||| |||||  | || ||||| |||| |||||||||||| ||||||||    
T  38178335 atatcatatctctatccaactcattaatgtctaggtctttgttaatagtttctcttatagtttttctaggtct 38178407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 2796622 - 2796555
Alignment:
Q  154 tctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||| ||||||||||    
T  2796622 tctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggcgctaccccca 2796555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 33666726 - 33666781
Alignment:
Q  164 tgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||||  ||||  |||||||||||||| ||||||||||||||||||||||    
T  33666726 tgcccaaaccatttaagtagagtttctaccatcttttctacgataggtgctacccc 33666781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 42854209 - 42854288
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | | ||| | ||||||| ||||||||    
T  42854209 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttctctgctataggtgttaccccca 42854288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 32043660 - 32043590
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||| ||||| |||||||||| ||| | ||||||||||||| ||| ||| ||||||| ||||||    
T  32043660 ggtcttctctctacatggccaaaccaccaaagtctagtttctaccatcttttgtactataggtgatacccc 32043590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 41444550 - 41444608
Alignment:
Q  161 acatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||| ||||||||||||| || |||||| |||||| ||||||| ||||||||||||||    
T  41444550 acatgtccaaaccacctaaacctagtttccaccatcttttctactataggtgctacccc 41444608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 38689616 - 38689547
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgatagg 210  Q
    |||||||  |||||||||| | ||| | ||||||||||||| |||||||||||||| ||||||| |||||    
T  38689616 aatctacaagtcttctctctagatgtcaaaaccacctaagctgagtttctaccatcttttctacaatagg 38689547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 39967579 - 39967651
Alignment:
Q  50 atatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatc 122  Q
    ||||||| |||||| ||||||||  ||||| | |||||||| |||| |||||||||||| ||||| |||||||    
T  39967579 atatctcaatccaactcattaatcgctagatctttcttaatagtttctcttatagtttttctaggcctacatc 39967651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 8879649 - 8879724
Alignment:
Q  146 acgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||| |||| |||||| || ||||| | | ||||||||| | ||||||| ||||||||| ||||||    
T  8879649 acgggtcttctctctacatacccaaatcatctaagtctattttctaccaacttttctactataggtgcttccccca 8879724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 35643685 - 35643764
Alignment:
Q  49 catatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctc 128  Q
    ||||| || |||||| |||||||| |||||| | ||||||||  ||| |||||||||||| |||||||| | ||||||||    
T  35643685 catatttcgatccaactcattaatctctagatctttcttaataatttctcttatagtttttctaggtcttcctctgcctc 35643764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 7103316 - 7103274
Alignment:
Q  173 cacctaagccgagtttctaccatcatttctacgataggtgcta 215  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||    
T  7103316 cacctaagcctagtttctaccatcttttctactataggtgcta 7103274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 35643814 - 35643868
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 204  Q
    |||||||||| |||||||||||||||||||||  | |||| |||||| |||||||    
T  35643814 gtcttctctctacatgcccaaaccacctaagcatattttccaccatcttttctac 35643868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 4011283 - 4011218
Alignment:
Q  52 atctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    |||| ||||||| |||||||| | |||| | |||||||| |||| |||||||||||| ||||||||    
T  4011283 atctttatccaactcattaatctttagatctttcttaatagtttctcttatagtttttctaggtct 4011218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 25985587 - 25985519
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||| |||||| ||| |||  ||| | ||||||||||||| ||||||| ||||||||||||||    
T  25985587 gtcttctctca-catgccaaaatcacgcaagtctagtttctaccatcttttctactataggtgctacccc 25985519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 30559782 - 30559717
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccat 195  Q
    |||||||| | |||||||  |||||||||| | |||||||||||||||||||| | |||| |||||    
T  30559782 ccttactacaaaatctacatgtcttctctctaaatgcccaaaccacctaagcctattttcgaccat 30559717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 1549588 - 1549644
Alignment:
Q  148 gggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 204  Q
    |||||||||||| |||||| ||||| ||||||||| ||||||  ||||| |||||||    
T  1549588 gggtcttctctctacatgctcaaactacctaagcctagtttcccccatcttttctac 1549644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 6483324 - 6483272
Alignment:
Q  152 cttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 204  Q
    |||| ||| |||||||||||||||||||||| |||||| ||| || |||||||    
T  6483324 cttccctctacatgcccaaaccacctaagccaagtttccaccctcttttctac 6483272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 12611586 - 12611538
Alignment:
Q  168 caaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    ||||||||||||||| |||||| |||||| |||||||  ||||||||||    
T  12611586 caaaccacctaagcctagtttccaccatcttttctactttaggtgctac 12611538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 13171875 - 13171931
Alignment:
Q  163 atgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||||||||||||  | |||| |||||| ||||||| ||||||||| ||||    
T  13171875 atgcccaaaccacctaagcatattttccaccatcttttctactataggtgcttcccc 13171931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 16917251 - 16917199
Alignment:
Q  152 cttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 204  Q
    |||||||  |||||||||||||||||||||| |||||  |||||| |||||||    
T  16917251 cttctctttacatgcccaaaccacctaagcctagtttgcaccatcttttctac 16917199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 23023316 - 23023244
Alignment:
Q  146 acgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||||||||| ||||   ||||| ||||||||| ||||||  ||||| ||||||| ||| |||||||||    
T  23023316 acgggtcttctctctacataatcaaactacctaagcctagtttcccccatcttttctacaataagtgctaccc 23023244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 36143451 - 36143367
Alignment:
Q  133 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    ||||| ||||||||  |||||| |||| | |||||||||||||||||| | | |||| ||||||  |||| | ||||||||||||    
T  36143451 tactacagaatctataggtcttttctctaaatgcccaaaccacctaagtctattttccaccatctattctgctataggtgctacc 36143367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 39051205 - 39051149
Alignment:
Q  156 tctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||| |||| |||||||||||||| |||||||||| ||||| |||| | ||||||||    
T  39051205 tctctacatacccaaaccacctaaaccgagtttctgccatcttttcaatgataggtg 39051149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 42493536 - 42493588
Alignment:
Q  167 ccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||||||||| |||||| || ||| ||||||| ||||||| ||||||    
T  42493536 ccaaaccacctaagcctagtttccacaatcttttctactataggtgttacccc 42493588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 42584448 - 42584408
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagcc 182  Q
    |||||| ||| ||||||| ||||||||||||||||||||||    
T  42584448 atctacaggttttctctctacatgcccaaaccacctaagcc 42584408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 9e-23; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 19262637 - 19262715
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  19262637 aatctacaggtcttctctctacatgctcaaaccacctaagccaagtttctaccatcttttctacaataggtgctacccc 19262715  T

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Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 13859213 - 13859292
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  13859213 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 13859292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 49029353 - 49029274
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  49029353 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 49029274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 12966111 - 12966025
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||||||||||  |||||| |||||| ||||| | |||||||||||    
T  12966111 ccttactacagaatttacgggtcttctctctacatgcccaaaccacctaagcatagtttccaccatcttttcttctataggtgctac 12966025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 28021032 - 28020964
Alignment:
Q  151 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||    
T  28021032 tcttctctctacatgcccaaaccacctaagccaagtttccaccatcttttctacgataagtgctacccc 28020964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 34869494 - 34869418
Alignment:
Q  145 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  34869494 tacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 34869418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 2885927 - 2886006
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||| ||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  2885927 atctacggatcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 2886006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 12841480 - 12841555
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||    
T  12841480 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 12841555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 31005300 - 31005221
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| |||| || | ||||||||| | ||||||| ||||||||||||||||    
T  31005300 atctacgggtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctaccccca 31005221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 33073029 - 33072950
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||||||||| || ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  33073029 atctacgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctaccccca 33072950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 35906406 - 35906481
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||    
T  35906406 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 35906481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 38607081 - 38607002
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  38607081 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacctttctactataggtgctaccccca 38607002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 43281751 - 43281672
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  43281751 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 43281672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 45836685 - 45836764
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  45836685 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 45836764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 36514403 - 36514489
Alignment:
Q  133 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||| |||||| ||  ||| |||||| |||||||||||||||||||| | ||||||||||||| ||||||| ||||||||||||||    
T  36514403 tactacagaatccacaagtcgtctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctacccc 36514489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 37618022 - 37617942
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccga-gtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| |  ||||||||| | ||||||| ||||||||||||||||    
T  37618022 atctacgggtcttctctctacatgcccaaaccatctaagcctatttttctaccaacttttctactataggtgctaccccca 37617942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 6374945 - 6374866
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||| ||||||||||| |||||| ||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  6374945 atctactggtcttctctctacatgctcaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 6374866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 7220813 - 7220750
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgc 213  Q
    |||||||||| |||||||||||||||||||||| |||||||| |||| ||||||| ||||||||    
T  7220813 gtcttctctctacatgcccaaaccacctaagccaagtttctatcatcttttctacaataggtgc 7220750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 11594037 - 11593958
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| |||| |  | ||||||||| | ||||||| ||||||||||||||||    
T  11594037 atctacgggtcttctctctacatgcccaaaccatctaaccgtattttctaccaacttttctactataggtgctaccccca 11593958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 33350011 - 33350090
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | |||||| || | ||||||| |||||||| |||||||    
T  33350011 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctagcaacttttctactataggtgcaaccccca 33350090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 40830311 - 40830224
Alignment:
Q  131 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    ||||||| ||||| | | |||||||||||  |||||||||||||||||||  |||||||||||||| ||||| | |||||||||||||    
T  40830311 cttactatagaatttgcaggtcttctctcttcatgcccaaaccacctaagtagagtttctaccatcttttcttcaataggtgctaccc 40830224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 44855377 - 44855456
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| |||||| ||| |||||    
T  44855377 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtactatcccca 44855456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 46356061 - 46356140
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||| |||||||||| |||||||||||||| |||| || | ||||||||| | ||||||| ||||||||||||||||    
T  46356061 atctacgtgtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctaccccca 46356140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 28628126 - 28628212
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||||||| | ||||||| ||| ||||||  |||||||||||||||||||||| | |||| ||||||||||||||  ||||||||||    
T  28628126 ccttactacataatctacaggttttctctttacatgcccaaaccacctaagccaattttccaccatcatttctactctaggtgctac 28628212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 36869449 - 36869527
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccc 220  Q
    |||||||||||||||||| ||||| |||||||| |||| || | ||||||||| | ||||||| |||||||||||||||    
T  36869449 atctacgggtcttctctctacatgaccaaaccatctaaacctattttctaccaacttttctactataggtgctaccccc 36869527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 40169727 - 40169649
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| ||||| |||| |||||||||||||||||||||| | |||| |||||| ||||||| ||| ||||||||||    
T  40169727 aatctacgtgtcttatctctacatgcccaaaccacctaagcctattttccaccatcttttctactataagtgctacccc 40169649  T

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Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 38920859 - 38920794
Alignment:
Q  154 tctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||| ||||||||||||||| |||||| |||||| |||||| ||||||| ||||||||||||||    
T  38920859 tctctctacatgcccaaaccacttaagcctagtttccaccatcttttctactataggtgctacccc 38920794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 39812046 - 39811957
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| |||||||||   ||||||||| |||||||||||| |||||||||||||||  |||||  |||||| |||||||||| ||||    
T  39812046 ccttactatagaatctacatctcttctctctacatgcccaaactacctaagccgagttttcaccattttttctatgataggtgctgcccc 39811957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 42187559 - 42187470
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| | ||||||| || |||||||  |||||||||||||||||||||| | |||| |||||| ||||||  ||||||||||||||    
T  42187559 ccttactacataatctacaggccttctctttacatgcccaaaccacctaagcctattttccaccatcttttctattataggtgctacccc 42187470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 47848743 - 47848674
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||| |||||||||||||||||||||| | |||| |||||| ||||||| ||||| ||||||||    
T  47848743 gtcttctctcgacatgcccaaaccacctaagcctattttccaccatcttttctactataggcgctacccc 47848674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 27021906 - 27021974
Alignment:
Q  151 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||| |||||||||||||||||||||| |||||  |||| | ||||||| ||||||||||||||    
T  27021906 tcttctctctacatgcccaaaccacctaagcctagttttcaccaacttttctactataggtgctacccc 27021974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 31682807 - 31682883
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||||||||||||| |||| ||||||||| ||||||| | ||||||||| | ||||||| ||| |||||||||    
T  31682807 atctacgggtcttctctctacatacccaaaccatctaagcctattttctaccaacttttctactatatgtgctaccc 31682883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 39906575 - 39906651
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    ||||| |||||||||||| ||||||||||| || ||||||| | ||||||||| | ||||||| |||||||||||||    
T  39906575 atctatgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctaccc 39906651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 22349694 - 22349623
Alignment:
Q  145 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    ||||||||||||||| ||||||| |||||| ||||||| | ||||||||| | ||||||| |||||||||||    
T  22349694 tacgggtcttctctctacatgccaaaaccatctaagcctattttctaccaacttttctactataggtgctac 22349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 29650461 - 29650382
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | |||||||||   ||||||| ||||||||| ||||||    
T  29650461 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaatttttctactataggtgctgccccca 29650382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 7189442 - 7189508
Alignment:
Q  153 ttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| |||||||||||||||||||||  | ||||||||||| ||||||| |||||||| |||||    
T  7189442 ttctctctacatgcccaaaccacctaagcttattttctaccatcttttctactataggtgcgacccc 7189508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 30914692 - 30914750
Alignment:
Q  161 acatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||||||||| ||||||||||||||||||  ||||||| |||||| |||||||    
T  30914692 acatgcccaaaccaccaaagccgagtttctaccattttttctacaataggtactacccc 30914750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 43491385 - 43491308
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||||||||||| |||||||||||||| ||||||| | |||||||||   ||| ||| ||||||| ||||||    
T  43491385 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaatttttatactataggtgttacccc 43491308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 45558447 - 45558362
Alignment:
Q  134 actagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||| |||||| || ||| ||||||| || ||| ||||||||||||| ||||||||||||| | ||||||| ||||||| ||||||    
T  45558447 actacagaatccacaggtattctctctacgtgcacaaaccacctaagtcgagtttctaccaacttttctactataggtggtacccc 45558362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 6420683 - 6420747
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctacca 194  Q
    |||||||| || ||||||  |||||||||| |||||||||||||||||||||| |||||| ||||    
T  6420683 ccttactacagtatctacaagtcttctctctacatgcccaaaccacctaagcctagtttccacca 6420747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 25826682 - 25826742
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgatag 209  Q
    ||||||||||| |||| | ||||||||| ||||||||||||||||||| ||||||| ||||    
T  25826682 ggtcttctctccacattcgcaaaccacccaagccgagtttctaccatcttttctacaatag 25826742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 28858132 - 28858044
Alignment:
Q  131 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| |||||| || |||| ||| || |||||||||||||||||||   |||||||||||||  ||||||| |||||||| |||||    
T  28858132 cttactatagaatccacaggtcatctttctacatgcccaaaccacctaacttgagtttctaccatgttttctacaataggtgccacccc 28858044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 24549902 - 24549945
Alignment:
Q  146 acgggtcttctctcaacatgcccaaaccacctaagccgagtttc 189  Q
    |||||||||||||| |||||||||||||||||||||| ||||||    
T  24549902 acgggtcttctctctacatgcccaaaccacctaagcctagtttc 24549945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 30633035 - 30632968
Alignment:
Q  152 cttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| |||||||||||||| |||||||||| ||| |||||  ||| || |||||||||||||||    
T  30633035 cttctctctacatgcccaaaccatctaagccgagcttccaccattttttttatgataggtgctacccc 30632968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 7273116 - 7273046
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||||| ||||||||||  |||||||||||||| ||||||| | ||||||||| | ||||||| |||||||    
T  7273116 atctacaggtcttctctgtacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 7273046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 36136830 - 36136764
Alignment:
Q  153 ttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| | |||||||||| ||||||| | | ||||||||||| ||||||| ||||||||||||||    
T  36136830 ttctctctatatgcccaaacaacctaagactattttctaccatcttttctactataggtgctacccc 36136764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 41948586 - 41948532
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 203  Q
    ||||||||||| ||||||||||||||| |||||| |||||| |||||| ||||||    
T  41948586 ggtcttctctctacatgcccaaaccacttaagcctagtttccaccatcttttcta 41948532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 5336005 - 5335920
Alignment:
Q  134 actagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||| |||||| || | ||||||||| | |||||||||||||||||| | |||||| |||||| || |||| |||| |||||||||    
T  5336005 actacagaatccacagttcttctctctatatgcccaaaccacctaagtctagtttcgaccatctttcctactatagatgctacccc 5335920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 14593845 - 14593772
Alignment:
Q  139 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||||| || ||||||||| | ||||||||||| |||||||| | ||||||||||||  ||||||| |||||||    
T  14593845 agaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 14593772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 18605350 - 18605427
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||  |||||||||| |||||| |||||||||||||   ||||||||||||| ||| ||  |||||||||||||    
T  18605350 aatctacatgtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctaccc 18605427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 18637640 - 18637563
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||  |||||||||| |||||| |||||||||||||   ||||||||||||| ||| ||  |||||||||||||    
T  18637640 aatctacatgtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctaccc 18637563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 18651074 - 18650997
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||  |||||||||| |||||| |||||||||||||   ||||||||||||| ||| ||  |||||||||||||    
T  18651074 aatctacatgtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctaccc 18650997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 43282477 - 43282408
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||| ||||||||||  |||||||||| |||||| |||  | ||||||| ||||||||||||||    
T  43282477 gtcttctctctacatgcccaattcacctaagcctagtttccaccgacttttctactataggtgctacccc 43282408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 48202895 - 48202960
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccat 195  Q
    |||||||| |||||||||  |||||||||| |||||| ||||||||||||||| || ||| |||||    
T  48202895 ccttactacagaatctacaagtcttctctctacatgcgcaaaccacctaagcctagattccaccat 48202960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 12966219 - 12966151
Alignment:
Q  49 catatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    ||||| |||||||||||||||||| |||| |   |||||||| |||| |||||||||||| ||||||||    
T  12966219 catatttctatccaaatcattaatctctaaatatttcttaatagtttctcttatagtttttctaggtct 12966151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 30144861 - 30144793
Alignment:
Q  133 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttc 201  Q
    ||||| |||||||||  |||||||||| || ||||||||| ||||||||||  ||||||||||| ||||    
T  30144861 tactatagaatctacaagtcttctctctacctgcccaaactacctaagccggatttctaccatcttttc 30144793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 36101977 - 36102045
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    ||||||||||| |||| ||||||||||||||||| | |||| | |||| ||||||  ||||||||||||    
T  36101977 ggtcttctctctacatccccaaaccacctaagcctattttccaacatcttttctattataggtgctacc 36102045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 40008636 - 40008692
Alignment:
Q  156 tctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||| ||||||||||||||||||| ||||||||| |||||| |||||  ||||||||    
T  40008636 tctctacatgcccaaaccacctaatccgagtttccaccatcttttctttgataggtg 40008692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 43791638 - 43791682
Alignment:
Q  134 actagagaatctacgggtcttctctcaacatgcccaaaccaccta 178  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||    
T  43791638 actacagaatctacaggtcttctctccacatgcccaaaccaccta 43791682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 38135405 - 38135476
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttc 201  Q
    |||||||| | ||||||| |||||||| || ||||| |||||||||||||||| | |||| |||||| ||||    
T  38135405 ccttactacaaaatctactggtcttctgtctacatgtccaaaccacctaagcctattttccaccatcttttc 38135476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 45601670 - 45601611
Alignment:
Q  58 atccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    |||||| |||||||| |||||| | |||||||| |||| |||||||||||| ||||||||    
T  45601670 atccaactcattaatctctagatctttcttaatggtttctcttatagtttttctaggtct 45601611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 46014386 - 46014464
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||| |||||||||||| ||||| || ||||| ||||||| | ||||||||| | ||||||| |||||||| |||||||    
T  46014386 atctatgggtcttctctctacatgtcc-aaccatctaagcctattttctaccaacttttctactataggtgcaaccccca 46014464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 1569210 - 1569140
Alignment:
Q  58 atccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctc 128  Q
    |||||| |||||||| |||||| | |||||||| |||  |||||||||||| ||||| |||| ||||||||    
T  1569210 atccaactcattaatctctagatctttcttaatagttactcttatagtttttctaggactacctctgcctc 1569140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 36652069 - 36652007
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 204  Q
    |||||||||||||||||| ||||||  |||||| ||||||| | ||||||||| | |||||||    
T  36652069 atctacgggtcttctctctacatgctgaaaccatctaagcctattttctaccaacttttctac 36652007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 46989961 - 46989903
Alignment:
Q  161 acatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||||||||||||  ||  ||| |||||| ||||||| ||||||||||||||    
T  46989961 acatgcccaaaccacctaagatgaaattcaaccatcttttctacaataggtgctacccc 46989903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 48736111 - 48736181
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| ||| |||||  ||||||||||||| | ||||||| ||||| |||||||  |||||||||||||    
T  48736111 ggtcttcgctctacatgagcaaaccacctaagtctagtttctcccatcttttctactgtaggtgctacccc 48736181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 25579279 - 25579356
Alignment:
Q  139 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||||||||  |||||||||| |||| ||||||||||||||||| | |||| |||||  ||||| | || ||||||||    
T  25579279 agaatctacatgtcttctctctacatccccaaaccacctaagcctattttccaccattttttctgctatgggtgctac 25579356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 35713764 - 35713719
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccat 195  Q
    |||||||||| |||||||||||||||||||||| | |||| |||||    
T  35713764 gtcttctctctacatgcccaaaccacctaagcctattttccaccat 35713719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 37595753 - 37595685
Alignment:
Q  143 tctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggt 211  Q
    ||||||||| || |||| ||| ||||| |||| |||||| ||||||| |||| | ||||||||||||||    
T  37595753 tctacgggtattttctccacaagcccataccaactaagctgagtttccaccagcttttctacgataggt 37595685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 31636129 - 31636202
Alignment:
Q  146 acgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||||||| |||||||||||||||||||| | ||||||||||||| ||||||| ||||||||||||||    
T  31636129 acgggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctacccc 31636202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 4496461 - 4496382
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  4496461 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccagcttttctactataggtgctaccccca 4496382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 24178587 - 24178508
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  24178587 atctacgggtcttctctccacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 24178508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 33667286 - 33667216
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||| |||||||||||||||||||| | ||||||||||||| ||||||| ||||||||||||||    
T  33667286 ggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctacccc 33667216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 1287784 - 1287863
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  1287784 atctacgtgtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 1287863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 18351111 - 18351190
Alignment:
Q  141 aatctacgggtcttctctcaaca-tgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||    
T  18351111 aatctacaggtcttctctctacaatgcccaaaccacctaagcctagtttctaccatattttctactataggtgctacccc 18351190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 38685044 - 38684965
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  38685044 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 38684965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 16347583 - 16347661
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccc 220  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| |||||||||||||||    
T  16347583 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccc 16347661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 28977067 - 28977143
Alignment:
Q  145 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||||||||||| |||||| ||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  28977067 tacgggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 28977143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 15168870 - 15168791
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccc 220  Q
    ||||||| |||| | |||||||||| ||||||||||| |||| | ||||||||||| ||||||| |||||||||||||||    
T  15168870 aatctacaggtcatttctcaacatgtccaaaccaccttagcctattttctaccatcttttctactataggtgctaccccc 15168791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 1275338 - 1275264
Alignment:
Q  145 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||| ||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||    
T  1275338 tacggatcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc 1275264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 42199375 - 42199301
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 204  Q
    |||||||| |||||||||  |||||||||| |||||||||||||||||||| | |||||| |||||| |||||||    
T  42199375 ccttactacagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctac 42199301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 2713024 - 2712944
Alignment:
Q  139 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||| || ||||||||||| |||||||||||||||||||| | ||| ||||||||| |||  || ||||||||||||||    
T  2713024 agaatccacaggtcttctctctacatgcccaaaccacctaagtctagtctctaccatcttttagactataggtgctacccc 2712944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 3301921 - 3301845
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||| |||||||    
T  3301921 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggggctaccc 3301845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 11675599 - 11675547
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagcc 182  Q
    |||||||| ||||||||| || |||||||||||||||||||||||||||||||    
T  11675599 ccttactacagaatctacaggccttctctcaacatgcccaaaccacctaagcc 11675547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 12492589 - 12492671
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacga---taggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| |   |||||||||||||||    
T  12492589 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagtaggtgctaccccca 12492671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 15489706 - 15489774
Alignment:
Q  151 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||| |||||||||||||| |||||| ||||||| |||||| ||||||| |||||| |||||||    
T  15489706 tcttctctctacatgcccaaaccatctaagctgagtttcaaccatcttttctacaataggtactacccc 15489774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 34273097 - 34273025
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||  ||||||||||||||||    
T  34273097 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtgctaccccca 34273025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 2075679 - 2075758
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | | ||||||| | |||||||  |||||| ||||||||    
T  2075679 atctacgggtcttctctctacatgcccaaaccatctaagcctattgtctaccaacttttctactgtaggtgttaccccca 2075758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 10082934 - 10083021
Alignment:
Q  132 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||| |||||| ||  |||||||||| ||||||| ||||||| |||| | ||||||||||||| ||||||| ||||||| ||||||    
T  10082934 ttactacagaatccacaagtcttctctctacatgccgaaaccacttaagtctagtttctaccatcttttctactataggtgatacccc 10083021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 14665791 - 14665712
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | |||||| || | | ||||| ||||||||||||||||    
T  14665791 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctatcaacttctctactataggtgctaccccca 14665712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 1525717 - 1525651
Alignment:
Q  146 acgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||||||||||||| ||||| |||| ||||||||| | ||||||||||||| ||||||| |||||||    
T  1525717 acgggtcttctctctacatgtccaagccacctaagtctagtttctaccatcttttctacaataggtg 1525651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 20456850 - 20456776
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||||||||||||||||| |||||  ||||||| ||||||| | ||||||||| | ||||||| |||||||||||    
T  20456850 atctacgggtcttctctctacatgttcaaaccatctaagcctattttctaccaacttttctactataggtgctac 20456776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 43475317 - 43475243
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||||| |||||||||||   || ||||||||||||||||| |||||| |||||| ||||||| |||||||||||    
T  43475317 atctacaggtcttctctctgaatacccaaaccacctaagcctagtttccaccatcttttctactataggtgctac 43475243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 4026528 - 4026594
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatc 196  Q
    |||||||| ||||||||| ||||| ||||| ||||| |||||||||||||| | |||||| ||||||    
T  4026528 ccttactacagaatctacaggtctcctctctacatgtccaaaccacctaagactagtttccaccatc 4026594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 14749396 - 14749310
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||||| | |||||| || ||||||||||| ||||| |||||||| ||||| | |||||||||||   ||||||| |||||||||||    
T  14749396 ccttacaacagaatccacaggtcttctctctacatgtccaaaccatctaagtctagtttctaccaatttttctactataggtgctac 14749310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 21952446 - 21952364
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||||||| |||||| || || |||||||| ||||| ||||||||||| || | ||||||| ||||| ||||||| |||||||    
T  21952446 ccttactatagaatccacaggacttctctctacatgtccaaaccacctgagtctagtttctgccatcttttctactataggtg 21952364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 36123405 - 36123466
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||  ||||||| |||||||    
T  36123405 gtcttctctctacatgcccaaatcacctaagtcgagtttctaccat-ttttctacaataggtg 36123466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 11002647 - 11002704
Alignment:
Q  161 acatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||||||||||||||| | ||||||||||||  |||||||  ||||||||||||    
T  11002647 acatgcccaaaccacctaagtctagtttctaccatgttttctactgtaggtgctaccc 11002704  T

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Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 28676665 - 28676596
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    ||||||||||| ||||||| |||||||||||| | | |||| |||||| ||||||| |||| ||||||||    
T  28676665 ggtcttctctctacatgccgaaaccacctaagactattttccaccatcttttctactatagctgctaccc 28676596  T

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Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 42199601 - 42199528
Alignment:
Q  44 aatatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    |||| ||||| ||||||||| ||||||||||||||| | |||| ||| |||| ||| |||||||| ||||||||    
T  42199601 aataccatatttctatccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtct 42199528  T

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Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 418178 - 418269
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccac--ctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||  |||||||||  || ||||||| ||||||||||||||   ||||||| | ||||| ||||| ||||||| ||||||||||||||    
T  418178 ccttactctagaatctacaagtattctctctacatgcccaaaccaggtctaagccaaatttctgccatcttttctaccataggtgctacccc 418269  T

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Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 37065597 - 37065533
Alignment:
Q  151 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgcta 215  Q
    ||||||||| |||||||||||  ||| ||| | ||||||||||||| ||||||| ||||||||||    
T  37065597 tcttctctctacatgcccaaatgacccaagtctagtttctaccatcttttctactataggtgcta 37065533  T

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Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 43558040 - 43558108
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||||| | |||||||||||||||||||  |||||| |||||| ||||||  |||| ||||||||    
T  43558040 gtcttctctctatatgcccaaaccacctaagcttagtttccaccatcttttctattatagatgctaccc 43558108  T

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Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 17213146 - 17213079
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    ||||||| ||||| |||  |||||||||||| ||||||||||| ||| ||||||| |||| |||||||    
T  17213146 gtcttctttcaacgtgcaaaaaccacctaagtcgagtttctacaatcttttctacaatagatgctacc 17213079  T

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Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 14749510 - 14749432
Alignment:
Q  49 catatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcct 127  Q
    ||||| ||||||||| || ||||| |||||| | ||||| || |||| |||||||||||| |||||||| | |||||||    
T  14749510 catatttctatccaactcgttaatctctagatccttcttgatagtttctcttatagtttttctaggtcttcctctgcct 14749432  T

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Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 79602 - 79553
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaa 179  Q
    |||||||| ||||||||  ||||||||||| ||||| |||||||||||||    
T  79602 ccttactacagaatctataggtcttctctctacatgtccaaaccacctaa 79553  T

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Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 14667816 - 14667763
Alignment:
Q  166 cccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||||||| | | |||| |||||| ||||||| ||||||||||||||    
T  14667816 cccaaaccacctaagtctattttccaccatcttttctactataggtgctacccc 14667763  T

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Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 38868966 - 38868885
Alignment:
Q  135 ctagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||||||||||||  || ||||||| ||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||    
T  38868966 ctagagaatctactagtgttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctatgataggtgctac 38868885  T

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Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 1210822 - 1210743
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  1210822 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 1210743  T

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Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 34792554 - 34792633
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  34792554 atctacgggtcttctctctacatgcccaaaccatctaagcctactttctaccaacttttctactataggtgctaccccca 34792633  T

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Target: chr1; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 51602133 - 51602057
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| |||||||||||||    
T  51602133 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 51602057  T

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Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 8671995 - 8671916
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||| ||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  8671995 atctacggatcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 8671916  T

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Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 15086011 - 15085932
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  15086011 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 15085932  T

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Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 22090173 - 22090094
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||| | |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  22090173 atctacgggtcttctccctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 22090094  T

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Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 30202335 - 30202414
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  30202335 atctacgggtcttctctctacatgaccaaaccatctaagcctattttctaccaacctttctactataggtgctaccccca 30202414  T

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Target: chr1; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 5338813 - 5338727
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||||||| || |||||| |||||||||||  ||||||||||||||||||||  |||||| |||||| ||||||| |||||||||||    
T  5338813 ccttactaaagcatctacaggtcttctctctgcatgcccaaaccacctaagctcagtttccaccatcttttctactataggtgctac 5338727  T

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Target: chr1; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 52073655 - 52073745
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgag-tttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| ||||||||   |||||||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| ||||||||||||||    
T  52073655 ccttactatagaatctatatgtcttctctctacatgtccaaaccacctaagccgagttttttaccatcttttctacaataggtgctacccc 52073745  T

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Target: chr1; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 43423807 - 43423719
Alignment:
Q  131 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| | |||||||  |||||||||| ||||| |||||||||||||||| |||||| |||||| ||||||| ||||||| ||||||    
T  43423807 cttactacataatctacaagtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactataggtgttacccc 43423719  T

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Target: chr1; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 696346 - 696267
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| |||| ||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  696346 atctacgggtcttctctctacatgtccaagccatctaagcctattttctaccaacttttctactataggtgctaccccca 696267  T

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Target: chr1; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 4001660 - 4001739
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||| ||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  4001660 atctacgggtctcctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 4001739  T

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Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 9592811 - 9592732
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||| ||| ||||||| | ||||||| | | ||||||| ||||||||||||||||    
T  9592811 atctacgggtcttctctctacatgcccaacccatctaagcctattttctacaaacttttctactataggtgctaccccca 9592732  T

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Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 48431601 - 48431688
Alignment:
Q  132 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||| | |||||||  |||||||||| |||||||||||||||||||||| | |||| |||||| ||||||| ||||| ||||||||    
T  48431601 ttactacaaaatctacaagtcttctctctacatgcccaaaccacctaagcctattttccaccatcttttctactataggggctacccc 48431688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 51440970 - 51441049
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||| ||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||| ||||||||    
T  51440970 atctccgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgttaccccca 51441049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 9509388 - 9509318
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||| |||||||||||| ||||||||| | ||| ||||||| ||||||| ||||||||||||||    
T  9509388 ggtcttctctctacatgcccaaactacctaagcctattttttaccatcttttctactataggtgctacccc 9509318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 40416460 - 40416374
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||||||| | ||||||| | ||||||||| ||||||| ||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  40416460 ccttactacaaaatctacagttcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttctactataggtgctac 40416374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 2544688 - 2544599
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| ||||||||  ||||||||||| ||||| |||||||||||||| |   |||| |||||| ||||||| ||||||||||||||    
T  2544688 ccttactatagaatctataggtcttctctctacatgtccaaaccacctaagtctgttttccaccatcttttctactataggtgctacccc 2544599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 16822234 - 16822290
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacg 205  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||| | ||||||    
T  16822234 ggtcttctctctacatgtccaaaccacctaagccgagtttctaccatcttgtctacg 16822290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 27848001 - 27848085
Alignment:
Q  133 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    ||||| || |||||| |||||||||||  ||||||||||||||||||||  | ||||||||||| ||||||| | ||||||||||    
T  27848001 tactacagcatctacaggtcttctctctgcatgcccaaaccacctaagcttattttctaccatcttttctaccacaggtgctacc 27848085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 32404719 - 32404807
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||| ||||||||| ||||||||||| ||||  |||||||||||||||| | |||| |||||| ||| ||| ||||||| |||||    
T  32404719 ccttactatagaatctacaggtcttctctctacatatccaaaccacctaagcctattttccaccatcttttttactataggtgttaccc 32404807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 10569263 - 10569318
Alignment:
Q  133 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagttt 188  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  10569263 tactacagaatctacaggtcttctctctacatgcccaaaccacctaagccaagttt 10569318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 32082950 - 32083029
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||| |||||  |||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  32082950 atctacgggtctcctctctgcatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 32083029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 32231167 - 32231238
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||| |||||||||||||| ||||||| | |||||||||   ||||||| ||||||||||||||||    
T  32231167 gtcttctctctacatgcccaaaccatctaagcctattttctaccaatttttctactataggtgctaccccca 32231238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 39140590 - 39140523
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    ||||||||||| |||||||||||||||||||||| | ||| | ||||| ||||||| |||||||||||    
T  39140590 ggtcttctctctacatgcccaaaccacctaagccaattttttgccatcttttctactataggtgctac 39140523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 14226022 - 14226108
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||||||| | ||||||| ||  | ||||| |||||||||||||||||||||| | |||| |||||| |||||| ||||||||||||    
T  14226022 ccttactacaaaatctacaggaatcctctctacatgcccaaaccacctaagcctattttccaccatcttttctatgataggtgctac 14226108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 3819051 - 3819136
Alignment:
Q  132 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    ||||||||||||| ||  ||||||| || ||||||||||||||| |||| | |||| | |||||| ||||||| ||||||||||||    
T  3819051 ttactagagaatccacaagtcttctttctacatgcccaaaccacttaagtctagttaccaccatcttttctaccataggtgctacc 3819136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 46388465 - 46388392
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 203  Q
    |||||||| |||||||||  |||||||||| |||||  ||||| |||||||||||||||| |||||| ||||||    
T  46388465 ccttactacagaatctacaagtcttctctctacatgtgcaaactacctaagccgagtttccaccatcttttcta 46388392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 49347598 - 49347675
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||||||||||  |||| |||||||| ||||||| | ||||||||| | ||||||| |||| |||||||||    
T  49347598 atctacgggtcttctctctgcatgaccaaaccatctaagcctattttctaccaacttttctactatagatgctacccc 49347675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 1661510 - 1661430
Alignment:
Q  139 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||  ||||||||||| |||||| ||||||| || |||| | |||| |||||| ||||||| ||||||||||||||    
T  1661510 agaatctataggtcttctctctacatgctcaaaccatctgagcctattttccaccatcttttctactataggtgctacccc 1661430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 13827763 - 13827855
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccccaa 222  Q
    |||||||| |||||||||   ||||||||| ||||| ||||||||||| | || |||||| ||| || ||||||| |||||| ||||||||||    
T  13827763 ccttactacagaatctacacttcttctctctacatgtccaaaccaccttaccctagtttccaccgtcttttctactataggtactacccccaa 13827855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 4029199 - 4029120
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| |||||||  ||||||| | ||||||||| | | |||||  |||||||||||||||    
T  4029199 atctacgggtcttctctctacatgtccaaaccttctaagcctattttctaccaacttgtctactctaggtgctaccccca 4029120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 8391849 - 8391770
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||| ||||| ||||| |||||| | |||| || | ||||||||| | ||||||| ||||||||||||||||    
T  8391849 atctacgggtctcctctctacatgtccaaacaatctaaacctattttctaccaacttttctactataggtgctaccccca 8391770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 13827920 - 13827999
Alignment:
Q  140 gaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||| ||| ||||||||||| |||||  |||||||||||| || |||||| |||||| ||||||| ||||||||| ||||    
T  13827920 gaatatacaggtcttctctctacatgttcaaaccacctaaccctagtttccaccatcttttctactataggtgctgcccc 13827999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 38807876 - 38807955
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||| |||||||||||  ||||||| |||||| ||||| | | ||||||||| | ||||||| ||||||||||||||||    
T  38807876 atctaagggtcttctctttacatgcctaaaccatctaagtctattttctaccaacttttctactataggtgctaccccca 38807955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 43240584 - 43240663
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||| ||||| | ||||||| | |||||| ||   ||||||| ||||||||||||||||    
T  43240584 atctacgggtcttctctctacatgctcaaactatctaagcctattttctatcaatttttctactataggtgctaccccca 43240663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 8343070 - 8343140
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||| |||||||||  ||||||||||| |||||| |||||| ||||||| | ||||| ||||||    
T  8343070 ggtcttctctctacatgcccagtccacctaagcctagtttccaccatcttttctactaaaggtgttacccc 8343140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 25979436 - 25979486
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctac 192  Q
    |||||||||||||||||| ||||| |||||||| ||||||| |||||||||    
T  25979436 atctacgggtcttctctctacatgtccaaaccatctaagcctagtttctac 25979486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 35828743 - 35828829
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||||||| | ||||||  ||||||||||| ||| | ||||||||||||| || | |||| |||||| ||||||| |||||||||||    
T  35828743 ccttactacataatctataggtcttctctctacacgtccaaaccacctaaccctattttccaccatcttttctaccataggtgctac 35828829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 37263397 - 37263331
Alignment:
Q  153 ttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| |||||||||||||||  ||| | ||||||||| ||| ||||||| ||||||||||||||    
T  37263397 ttctctctacatgcccaaaccactgaagtctagtttctactatcttttctactataggtgctacccc 37263331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 15577629 - 15577568
Alignment:
Q  41 tcaaatatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttat 102  Q
    ||||||||||||||||||||||| |||||||| |||| | | |||||||| |||| ||||||    
T  15577629 tcaaatatcatatctctatccaactcattaatctctatatccttcttaatagtttctcttat 15577568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 17275285 - 17275196
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| | ||||||| ||  ||||||| |||||| ||||||||||||||| |||||| || ||| ||||||| ||||  ||||||||    
T  17275285 ccttactacaaaatctacagggattctctctacatgcacaaaccacctaagccaagtttccacaatcttttctactatagaagctacccc 17275196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 8342952 - 8343028
Alignment:
Q  41 tcaaatatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    |||||||  |||| ||||||||| |||||||| |||||| | || ||||| |||| |||||||||||| ||||||||    
T  8342952 tcaaatactatatttctatccaactcattaatctctagatctttattaattgtttctcttatagtttttctaggtct 8343028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 44008656 - 44008616
Alignment:
Q  151 tcttctctcaacatgcccaaaccacctaagccgagtttcta 191  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  44008656 tcttttctctacatgcccaaaccacctaagccgagtttcta 44008616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 27637846 - 27637913
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    ||||| |||| ||||||||||| |||||||| | |||||||| |||| ||||| | ||||||||||||    
T  27637846 gtcttttctctacatgcccaaaacacctaagtctagtttctatcatcttttctgctataggtgctacc 27637913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 10272338 - 10272260
Alignment:
Q  140 gaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    ||||| || ||||||||||| ||||||| ||||||| | || | ||||||||||||| ||||||| | |||||| ||||    
T  10272338 gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 10272260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 12231571 - 12231509
Alignment:
Q  46 tatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagtttt 108  Q
    |||||||||||||||||| |||||||| || ||| | |||||||| || | ||||||||||||    
T  12231571 tatcatatctctatccaactcattaatctcgagatctttcttaatagtctctcttatagtttt 12231509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 37463101 - 37463155
Alignment:
Q  165 gcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||||||||||| | |||||||  || ||||||| ||||||||||||||    
T  37463101 gcccaaaccacctaagcctattttctactgtcttttctactataggtgctacccc 37463155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 38877547 - 38877621
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgcta 215  Q
    ||||||| |||| |||||| ||||||  |||||||||||||||| ||| ||| ||| |||||| ||||| |||||    
T  38877547 aatctacaggtcatctctctacatgcttaaaccacctaagccgaatttttacaatcttttctatgatagatgcta 38877621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 51812591 - 51812525
Alignment:
Q  153 ttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| ||||||||||| ||| |||||| |||||| |||||| ||||||| |||| || ||||||    
T  51812591 ttctctctacatgcccaaatcacataagcctagtttccaccatcttttctactatagttgttacccc 51812525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 52561843 - 52561893
Alignment:
Q  169 aaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||||||| | |||||| |||||||||||| | ||||||||||||    
T  52561843 aaaccacctaagcctattttctatcatcatttctactaaaggtgctacccc 52561893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 9599620 - 9599669
Alignment:
Q  163 atgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||||| ||||||||||||| | ||||||||||| ||||||| |||||||    
T  9599620 atgcccgaaccacctaagcctattttctaccatcttttctactataggtg 9599669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 23791857 - 23791926
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||| |||||| |||||||||||||   ||| ||||||||| ||||||| || ||| |||||||    
T  23791857 gtcttctctctacatgcacaaaccacctaagtttagtatctaccatcttttctaccatgggtcctacccc 23791926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 40419708 - 40419639
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||| ||||||||||||||| |||| | |||| ||||||||  |||||| ||| || |||||||    
T  40419708 gtcttctctctacatgcccaaaccacttaagtctagttactaccatctattctactataagttctacccc 40419639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 43954264 - 43954199
Alignment:
Q  154 tctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||| |||||| ||||||||||||||| |||||| | |||  |||||| |||||| ||||||||    
T  43954264 tctctctacatgctcaaaccacctaagccaagtttccatcatattttctaagataggcgctacccc 43954199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 46388583 - 46388514
Alignment:
Q  45 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctagg 114  Q
    |||||||||| |||||||| |||| ||| |||||| | |||||||  |||| |||||||||||| |||||    
T  46388583 atatcatatccctatccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctagg 46388514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 46395027 - 46394958
Alignment:
Q  45 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctagg 114  Q
    |||||||||| |||||||| |||| ||| |||||| | |||||||  |||| |||||||||||| |||||    
T  46395027 atatcatatccctatccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctagg 46394958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 40416574 - 40416506
Alignment:
Q  49 catatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    ||||| || |||||| |||||||| | |||| | |||||||| |||| |||||||||||| ||||||||    
T  40416574 catatttcgatccaactcattaatctatagatctttcttaatagtttgtcttatagtttttctaggtct 40416506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 31545 - 31466
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  31545 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 31466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 44061 - 44150
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||||||||   ||||||||||| |||||||||||||||||||||| | ||||  ||||| ||||||| ||||||||||||||    
T  44061 ccttactagagaatctgaaggtcttctctctacatgcccaaaccacctaagcctattttccgccatcttttctactataggtgctacccc 44150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 31960019 - 31960098
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  31960019 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 31960098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 43434001 - 43433922
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  43434001 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 43433922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 52569720 - 52569799
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  52569720 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 52569799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 35555844 - 35555928
Alignment:
Q  134 actagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||| |||||| || ||||||||||| | |||||||||||||||||| | ||||||||||||| ||||||| |||||||||||||    
T  35555844 actacagaatccacaggtcttctctctaaatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccc 35555928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 33227286 - 33227207
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||| | ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  33227286 atctacgggtcttctctctacatgcccaaacaatctaagcctattttctaccaacttttctactataggtgctaccccca 33227207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 53707871 - 53707796
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||    
T  53707871 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 53707796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 40018379 - 40018465
Alignment:
Q  133 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||| ||||| |||  ||||||||||  |||||||||||||| |||||| ||||||||||||| ||| ||||||||||||||||||    
T  40018379 tactatagaatatacaagtcttctctcggcatgcccaaaccacataagccaagtttctaccatcttttttacgataggtgctacccc 40018465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 49738808 - 49738886
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||| |||||||||||  ||| || |||| |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  49738808 aatctatgggtcttctctttacacgctcaaatcacctaagccgagtttctaccatcttttctacaataggtgctacccc 49738886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 48622751 - 48622827
Alignment:
Q  145 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| || |||||||||||||    
T  48622751 tacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatgggtgctaccccca 48622827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 436306 - 436227
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||| ||||||||||| ||||||||||| || ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  436306 atctacaggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctaccccca 436227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 4440930 - 4440851
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| | |||||||||||| ||||||| | ||||||||| | ||||||| ||||||||| ||||||    
T  4440930 atctacgggtcttctctctagatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctgccccca 4440851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 27450384 - 27450463
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| | |||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  27450384 atctacgggtcttctctctacatgtcaaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 27450463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 33191053 - 33191132
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||| | ||||| | | ||||||||| | ||||||| ||||||||||||||||    
T  33191053 atctacgggtcttctctctacatgcccaaacaatctaagtctattttctaccaacttttctactataggtgctaccccca 33191132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 48174298 - 48174377
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||||||||| || ||||||| | ||||||||| | ||||||| ||||||| ||||||||    
T  48174298 atctacgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgttaccccca 48174377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 1380456 - 1380374
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||||||| | ||||||| ||| ||||||| || |||||||||||||||||||||||||||| |||  |||||||| ||||||    
T  1380456 ccttactacaaaatctacaggttttctctctacgtgcccaaaccacctaagccgagtttctatcatgttttctacggtaggtg 1380374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 31459098 - 31459032
Alignment:
Q  151 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    ||||||||  |||||||||||||||||||||| | ||||||||||| ||||||| ||||||||||||    
T  31459098 tcttctctttacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacc 31459032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 38903924 - 38904001
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||  |||||||||| |||||| ||||||| |||||||||||||| |||||| |||||| ||| ||||||||||    
T  38903924 aatctacaagtcttctctccacatgctcaaaccaactaagccgagtttccaccatcttttctatgatcggtgctaccc 38904001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 41192921 - 41192836
Alignment:
Q  134 actagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||| ||||||||| ||||||||||| |||||| |||| |||||||| | |||||| |||||| |||||||  |||||||||||||    
T  41192921 actacagaatctacaggtcttctctctacatgcacaaatcacctaagtctagtttccaccatcttttctactgtaggtgctacccc 41192836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 51252674 - 51252743
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||| ||||||||| |||||||||||| |||||| |||||| ||||||| | ||||||||||||    
T  51252674 gtcttctctctacatgcccataccacctaagcctagtttccaccatcttttctactagaggtgctacccc 51252743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 54470276 - 54470207
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||| ||||||||||||||| |||| | |||||| |||||| ||||||| ||||||||||||||    
T  54470276 gtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggtgctacccc 54470207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 56375367 - 56375290
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||||||||||| |||||||||||||| |||||||   ||||||||| | ||||||  ||||||||||||||    
T  56375367 atctacgggtcttctctctacatgcccaaaccatctaagcctgttttctaccaacttttctattataggtgctacccc 56375290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 44047550 - 44047630
Alignment:
Q  139 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||| ||||||  ||| ||||| |||||||||||||||| || |||||||| | ||||||| ||||||||||||||    
T  44047550 agaatctacaggtcttaactctacatgtccaaaccacctaagcctagattctaccaccttttctactataggtgctacccc 44047630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 46715585 - 46715649
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgct 214  Q
    |||||||||| ||||||||| |||||||||||| |||||| |||||| ||||||| |||||||||    
T  46715585 gtcttctctctacatgcccacaccacctaagcctagtttccaccatcttttctacaataggtgct 46715649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 28236252 - 28236181
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||| |||||||||||||| ||||||| | |||| |||| | ||||||| ||||||||||||||||    
T  28236252 gtcttctctctacatgcccaaaccatctaagcctattttccaccaacttttctactataggtgctaccccca 28236181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 33710011 - 33709924
Alignment:
Q  132 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||| |||||| || | ||||||||| ||||||| ||||||||||| || |||||| |||||| ||||||| ||||||| ||||||    
T  33710011 ttactacagaatccacagttcttctctccacatgcctaaaccacctaaacctagtttccaccatcttttctactataggtgttacccc 33709924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 209
Target Start/End: Original strand, 42285897 - 42285972
Alignment:
Q  134 actagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgatag 209  Q
    |||| |||||| || ||||||||||  |||||||||||||||||||| | ||||||||||||| ||||||| ||||    
T  42285897 actacagaatccacaggtcttctctatacatgcccaaaccacctaagtctagtttctaccatcttttctactatag 42285972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 29398903 - 29398822
Alignment:
Q  134 actagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgcta 215  Q
    |||| ||||||||  ||||||||||| ||||||||||||||| |||||  | |||| |||||| ||||||| ||||||||||    
T  29398903 actacagaatctataggtcttctctctacatgcccaaaccacataagcatattttccaccatcttttctaccataggtgcta 29398822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 45094372 - 45094433
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgatagg 210  Q
    ||||||| ||| ||||||||||||||||||||||||||||  |||||| |||||| ||||||    
T  45094372 ggtcttccctctacatgcccaaaccacctaagccgagttttcaccatcctttctatgatagg 45094433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 42293452 - 42293528
Alignment:
Q  140 gaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    ||||||||  ||| ||| || |||| |||||||||||||||||||||||| | |||| ||||||| |||||||||||    
T  42293452 gaatctacatgtcgtctttctacatacccaaaccacctaagccgagtttccatcatcttttctactataggtgctac 42293528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 42639233 - 42639301
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||||| ||||| ||||||||||||||||  ||||| |||||| ||||||| |||||||| ||||    
T  42639233 gtcttctctctacatgtccaaaccacctaagcctggtttccaccatcttttctactataggtgcaaccc 42639301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 20192110 - 20192031
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||| | ||||||  | |||||| || | ||||||| ||| ||||||||||||    
T  20192110 atctacgggtcttctctctacatgcccaaactatctaagcttattttctatcaacttttctactataagtgctaccccca 20192031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 23906508 - 23906579
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||| |||||| ||||||| ||||||| | ||||||| | | ||||||| ||||||||||||||||    
T  23906508 gtcttctctctacatgctcaaaccatctaagcctattttctacaaacttttctactataggtgctaccccca 23906579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 37797929 - 37797854
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    |||||||  ||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||    
T  37797929 atctacgaatcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 37797854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 38903793 - 38903875
Alignment:
Q  45 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctc 128  Q
    |||||||||||||||| || |||||||| | |||  | |||||||| |||| |||||||||||| |||||||| ||||||||||    
T  38903793 atatcatatctctatcaaactcattaatctttaggtctttcttaatagtttctcttatagtttt-ctaggtcttcatctgcctc 38903875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 50662477 - 50662394
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaa-ccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||||| | |||||||||  |||||||||| ||||||||||| ||||||||||| | |||| |||||| ||||||| |||||||    
T  50662477 ccttacaatagaatctacaagtcttctctctacatgcccaaaaccacctaagcctactttccaccatcttttctactataggtg 50662394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 17900550 - 17900480
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||| || |||||||||||| | || | |||||||||| || ||||||| ||||||||||||||    
T  17900550 ggtcttctctctacgtgcccaaaccacatgagtctagtttctaccgtcttttctactataggtgctacccc 17900480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 31897625 - 31897708
Alignment:
Q  134 actagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||| |||||| || ||||| ||||| |||||| ||||||||| ||| | ||||||||||||| |||||||  |||||||||||||    
T  31897625 actacagaatccacaggtctgctctctacatgcgcaaaccacccaagtctagtttctaccatcttttctac--taggtgctacccc 31897708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 37773659 - 37773733
Alignment:
Q  145 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| ||| || |||||||||||||| ||||||| | ||||||||  | ||||||| ||||||||||||||    
T  37773659 tacgggtcgtctatctacatgcccaaaccatctaagcctattttctaccgacttttctactataggtgctacccc 37773733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 50471596 - 50471526
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||| ||||||||||||||| ||| || |||||| |||||| ||||||| ||  ||||||||||    
T  50471596 ggtcttctctctacatgcccaaaccacttaaacctagtttccaccatcttttctactattagtgctacccc 50471526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 21879346 - 21879419
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 203  Q
    |||||||| |||||||||  |||||||||   |||| |||||| |||||||||||||||| |||||| ||||||    
T  21879346 ccttactaaagaatctacatgtcttctctatgcatgtccaaactacctaagccgagtttccaccatcttttcta 21879419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 28497578 - 28497490
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| | |||||||  |||||||||| ||||||||||||||||||||||   |||| || ||| ||||||| | ||||||||||||    
T  28497578 ccttactacataatctacaagtcttctctctacatgcccaaaccacctaagcc-tttttccacaatcttttctactaaaggtgctacccc 28497490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 31339625 - 31339537
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| | |||||||  |||||||||| |||||| ||||||||||||||  |||||| |||||  ||||||| |||||| |||||||    
T  31339625 ccttactacataatctacaagtcttctctctacatgctcaaaccacctaagcttagtttcgaccat-ttttctaccataggttctacccc 31339537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 38570960 - 38571029
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| || |||||||||||||||||||||| |||||| || ||| ||| ||| ||||||||| ||||    
T  38570960 gtcttctttctacatgcccaaaccacctaagcctagtttccactatcttttgtactataggtgcttcccc 38571029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 44360155 - 44360087
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||| |||||||||||| |||||| |  ||||||||||||| ||||||| ||||||| ||||||    
T  44360155 gtcttctctctacatgcccaaacaacctaatct-agtttctaccatcttttctactataggtgatacccc 44360087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 46372093 - 46372024
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||| |||||| ||||||||||||| | ||||||||| ||  |||| || ||||||||||||||    
T  46372093 gtcttctctctacatgcacaaaccacctaagtctagtttctacaatattttcgactataggtgctacccc 46372024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 50287039 - 50286970
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggt 211  Q
    |||||||||||||||||| |||||||||||||| | ||| | | ||||||||| | ||||||| ||||||    
T  50287039 atctacgggtcttctctctacatgcccaaaccatccaagtctattttctaccaacttttctactataggt 50286970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 8286508 - 8286456
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctacca 194  Q
    |||||||||||||||||| ||||||| |||||| ||||||| | |||||||||    
T  8286508 atctacgggtcttctctctacatgcctaaaccatctaagcctattttctacca 8286456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 37488276 - 37488216
Alignment:
Q  67 attaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcct 127  Q
    |||||| |||||| | |||||||| |||| |||||||||||| |||||||||| |||||||    
T  37488276 attaatttctagatctttcttaatagtttctcttatagtttttctaggtctacctctgcct 37488216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 40018264 - 40018336
Alignment:
Q  45 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    |||||||||| |||||||| ||||| || |||||| | |||||||  ||||||||||||||||| ||| ||||    
T  40018264 atatcatatccctatccaactcattgatctctagatctttcttaacagtttttcttatagtttttctaagtct 40018336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 40268466 - 40268522
Alignment:
Q  140 gaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatc 196  Q
    |||||||| ||||||||||| |||||||||| ||||| |||||||||| | ||||||    
T  40268466 gaatctacaggtcttctctctacatgcccaagccaccaaagccgagttcccaccatc 40268522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 20591513 - 20591584
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||| |||||||||||||| |||| |  | ||||||||| | ||||||| ||| ||||||||||||    
T  20591513 gtcttctctctacatgcccaaaccatctaatcttattttctaccaacttttctactataagtgctaccccca 20591584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 30853426 - 30853387
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttc 189  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  30853426 gtcttctctctacatgcccaaaccacctaagctgagtttc 30853387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 39100740 - 39100819
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||| ||||||||| |||||  ||||||| ||||||| | |||||| || | ||||| | ||||||||||||||||    
T  39100740 atctacggatcttctctctacatgttcaaaccatctaagcctattttctatcaacttttcttctataggtgctaccccca 39100819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 47611797 - 47611742
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 204  Q
    ||||||||||| |||||||||||||||||||||| | |||| | |||| |||||||    
T  47611797 ggtcttctctctacatgcccaaaccacctaagcctattttccatcatcttttctac 47611742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 934648 - 934717
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||| ||||| || |||||||||||||||||  |||||||||||||| |||| | |||||||| ||||||    
T  934648 ggtctcctctctacttgcccaaaccacctaagatgagtttctaccatcttttc-atgataggtgatacccc 934717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 1793529 - 1793459
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccc 220  Q
    |||||||||| ||||| |||||||| ||||||  | ||||||||| | ||| ||| |||||||||||||||    
T  1793529 gtcttctctctacatgtccaaaccatctaagcttattttctaccaacttttttactataggtgctaccccc 1793459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 2589056 - 2588991
Alignment:
Q  153 ttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| ||||||| |||||||||||| | ||||||||||||| |||| || |||||| |||||||    
T  2589056 ttctctctacatgcctaaaccacctaagtctagtttctaccatcttttc-actataggtactacccc 2588991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 10209104 - 10209034
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||| | |||||||||||||| |||||   ||||||| ||||| ||||||| |||||| |||||||    
T  10209104 ggtcttctcgctacatgcccaaaccaactaagtttagtttctgccatcttttctactataggttctacccc 10209034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 10209229 - 10209171
Alignment:
Q  59 tccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    ||||| |||||||| |||||| | |||||||| |||| |||||||||||| ||||||||    
T  10209229 tccaactcattaatctctagatccttcttaatagtttctcttatagtttttctaggtct 10209171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 21214793 - 21214835
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctac 192  Q
    |||||||||| ||||||||||||||||||||| |||| |||||    
T  21214793 gtcttctctctacatgcccaaaccacctaagcagagtctctac 21214835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 26356688 - 26356626
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||||||||| |  ||||||||||||||||| | | ||||||||||| ||||||| |||||||    
T  26356688 gtcttctctctaagtgcccaaaccacctaagtctattttctaccatcttttctactataggtg 26356626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 45569085 - 45569167
Alignment:
Q  46 tatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctc 128  Q
    |||||||||||||||||| ||||| || ||||||   |||||||| |||| ||||||| | || |||||||| | ||||||||    
T  45569085 tatcatatctctatccaactcattgatctctagatttttcttaatagtttctcttataatgtttctaggtcttcctctgcctc 45569167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 29182571 - 29182498
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 203  Q
    |||||| | ||||||||| ||| ||||||| ||||||| |||||||||||||  ||||| || |||| ||||||    
T  29182571 ccttaccacagaatctaccggttttctctctacatgcctaaaccacctaagcttagtttgtagcatcttttcta 29182498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 45176084 - 45176043
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagcc 182  Q
    |||||||  |||||||||| ||||||||||||||||||||||    
T  45176084 aatctacaagtcttctctctacatgcccaaaccacctaagcc 45176043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 47265409 - 47265486
Alignment:
Q  144 ctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||| |||||||||| ||||||||||| || |||| || | ||||||| | | ||||||| ||||||| ||||||||    
T  47265409 ctacgtgtcttctctctacatgcccaaatcatctaaacctattttctactaccttttctactataggtgttaccccca 47265486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 50680934 - 50680865
Alignment:
Q  58 atccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcct 127  Q
    |||||| |||||||| |||||| | |||| |||  ||| |||||||||||| |||||||||| |||||||    
T  50680934 atccaactcattaatctctagatctttctaaataatttctcttatagtttttctaggtctacctctgcct 50680865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 51421807 - 51421730
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||| ||||||||||  | |||||||||||||||||||| | |||||| ||||   ||||| ||| ||||||||||    
T  51421807 atctaccggtcttctctgtatatgcccaaaccacctaagcctattttctatcatctaatctactatatgtgctacccc 51421730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 21879228 - 21879292
Alignment:
Q  45 atatcatatctctatccaaatcattaatatctagaccgttctt-aatcgtttttcttatagtttt 108  Q
    ||||||||||||||||||| ||||| || |||||| | ||||| ||| |||| ||||||||||||    
T  21879228 atatcatatctctatccaactcattcatctctagatctttcttgaatagtttctcttatagtttt 21879292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 42293327 - 42293403
Alignment:
Q  32 aatgctgtctcaaatatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagtttt 108  Q
    |||||| | ||| ||| ||||| |||||| || |||||||| |||||| | |||||||| |||| ||||||||||||    
T  42293327 aatgctctatcatataccatatgtctatctaactcattaatttctagatctttcttaatagtttctcttatagtttt 42293403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 44860934 - 44860862
Alignment:
Q  131 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 203  Q
    ||||||| | ||||||| | ||||||||  |||||||||||||| |||||||  ||||| |||||| ||||||    
T  44860934 cttactacaaaatctacagctcttctctatacatgcccaaaccatctaagcctggtttccaccatcttttcta 44860862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 50960845 - 50960915
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| ||||||||||||||    
T  50960845 ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacccc 50960915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 54128455 - 54128378
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||| |||||| |||| |||||||||||||||||||||| | ||||||||||| ||||||| ||||||||||||||    
T  54128455 atctacaggtcttttctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacccc 54128378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 49503766 - 49503834
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    ||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| ||||||||||||    
T  49503766 ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacc 49503834  T

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Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 52138877 - 52138798
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||| ||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  52138877 atctacaggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 52138798  T

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Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 22149 - 22071
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  22149 atctacgggtcttctctctacatgtccaaaccatctaagccta-tttctaccaacttttctactataggtgctaccccca 22071  T

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Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 28245514 - 28245435
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||| ||||||| |||||||||||||| ||||| | | ||||||||| | ||||||| ||||||||||||||||    
T  28245514 atctacgggttttctctctacatgcccaaaccatctaagtctattttctaccaacttttctactataggtgctaccccca 28245435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 35033223 - 35033144
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| ||||||||  |||||| | ||||||||| | ||||||| ||||||||||||||||    
T  35033223 atctacgggtcttctctctacatgtccaaaccatataagcctattttctaccaacttttctactataggtgctaccccca 35033144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 47233801 - 47233876
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||    
T  47233801 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 47233876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 3987125 - 3987047
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||  |||||||||| |||| ||||||||||||||| | ||||||||||||| ||||||| ||||||| ||||||    
T  3987125 aatctaccagtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctactataggtgatacccc 3987047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 19737074 - 19736992
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccccaact 224  Q
    |||||| |||||||||||  ||||| |||||||||||| || | ||||||||||| ||||||| ||||||||| |||||||||    
T  19737074 atctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtgctgcccccaact 19736992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 19757977 - 19757895
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccccaact 224  Q
    |||||| |||||||||||  ||||| |||||||||||| || | ||||||||||| ||||||| ||||||||| |||||||||    
T  19757977 atctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtgctgcccccaact 19757895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 21200637 - 21200550
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||  |||||||||  |||||||||| |||||||||||||||||||| | |||||| |||||| |||||||  |||||||||||||    
T  21200637 ccttactgcagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctac--taggtgctacccc 21200550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 41842706 - 41842792
Alignment:
Q  132 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||| ||||||||| | ||||||||| |||| ||||||||||||||| |  ||||| |||||| ||||||| |||||||||||||    
T  41842706 ttactacagaatctaccgctcttctctctacatacccaaaccacctaagactggtttccaccatcttttctactataggtgctaccc 41842792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 43694970 - 43695048
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccc 220  Q
    |||||| ||||||||||| |||||||||||||| ||||||  | ||||||||| | ||||||| |||||||||||||||    
T  43694970 atctacaggtcttctctctacatgcccaaaccatctaagcaaattttctaccaacttttctactataggtgctaccccc 43695048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 39235215 - 39235154
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 203  Q
    |||||| ||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||    
T  39235215 atctacaggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 39535642 - 39535715
Alignment:
Q  139 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    ||||||||  ||||||||||| || |||| ||||||||||||||| |||||||||||| ||||||| |||||||    
T  39535642 agaatctataggtcttctctctacttgcctaaaccacctaagccgggtttctaccatcttttctactataggtg 39535715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 54279097 - 54279020
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||||||||||| || ||||||||||  ||||||| | ||||||||| | ||||||| ||||||||||||||    
T  54279097 atctacgggtcttctctctacgtgcccaaaccgtctaagcctattttctaccaacttttctactataggtgctacccc 54279020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 51447915 - 51447991
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||| ||||||||| |||||||||||| | ||||||| | ||||||||| | ||||||| |||||||||||||    
T  51447915 atctacggatcttctctctacatgcccaaactatctaagcctattttctaccaacttttctactataggtgctaccc 51447991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 5168909 - 5168830
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||  ||||||| ||||||  | ||||||||| | ||||||| ||||||||||||||||    
T  5168909 atctacgggtcttctctctacatgttcaaaccatctaagcgtattttctaccaacttttctaccataggtgctaccccca 5168830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 38060508 - 38060429
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||| ||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||  ||||||||||||||||    
T  38060508 atctacaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattataggtgctaccccca 38060429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 19676276 - 19676362
Alignment:
Q  133 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||| || |||||| ||||||||||| ||||||| | |||||||||||| | |||||| |||| ||| ||| ||||||||||||||    
T  19676276 tactacagcatctacaggtcttctctctacatgccaataccacctaagccaattttctatcatcttttgtactataggtgctacccc 19676362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 29375023 - 29374941
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||||||| | ||||||| |||||| |||| ||| ||||||| |||||||| ||||||||||||||| ||||| | |||||||    
T  29375023 ccttactacaaaatctacaggtcttttctctacaagcccaaatcacctaagtcgagtttctaccatcttttctccaataggtg 29374941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 31261155 - 31261212
Alignment:
Q  151 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgata 208  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||| ||||| |||||    
T  31261155 tcttctctcaacatgcccaaaccatctaagctgagtttctatcatcttttcttcgata 31261212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 36820154 - 36820243
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| | |||||| |||||||||||  ||||| | |||||||||||||| |||||| |||||| || |||  ||||||||||||||    
T  36820154 ccttactacataatctatgggtcttctctttacatgtctaaaccacctaagcctagtttccaccatctttgctaatataggtgctacccc 36820243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 26490373 - 26490317
Alignment:
Q  161 acatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    ||||| |||||||||||||||| | ||||||||||| ||||||| ||||||||||||    
T  26490373 acatgtccaaaccacctaagcctattttctaccatcttttctactataggtgctacc 26490317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 38430918 - 38430850
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    |||| |||||| |||||||||| | ||||||||| | ||||||||||| ||||||| ||||||||||||    
T  38430918 ggtcgtctctctacatgcccaatcaacctaagcctattttctaccatcttttctactataggtgctacc 38430850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 48734349 - 48734417
Alignment:
Q  151 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||| |||||||||||||||||||||| | |||||||||||  |||||| ||| | ||||||||    
T  48734349 tcttctctctacatgcccaaaccacctaagcctattttctaccatctgttctactatacgcgctacccc 48734417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 25191454 - 25191375
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| |||||||| ||||| | | ||||| |||   ||||||| ||||||||||||||||    
T  25191454 atctacgggtcttctctctacatgtccaaaccatctaagtctattttcttccaatttttctactataggtgctaccccca 25191375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 40982102 - 40982031
Alignment:
Q  46 tatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    |||||||| |||||||||  |||||||||||||| | |||||||| |||  |||||||||||| ||||||||    
T  40982102 tatcatatatctatccaacacattaatatctagatctttcttaatagttactcttatagtttttctaggtct 40982031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 659613 - 659528
Alignment:
Q  131 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    ||||||| |||||||||   | ||||||| |||||||||||||||||||||  ||||||||| ||| |||||| ||| || |||||    
T  659613 cttactacagaatctacaaattttctctctacatgcccaaaccacctaagctaagtttctactatcttttctatgattggagctac 659528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 11581513 - 11581460
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 203  Q
    |||||||||| |||| ||||||||||||||| | ||||||||||||| ||||||    
T  11581513 gtcttctctctacatacccaaaccacctaagtctagtttctaccatcttttcta 11581460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 21200756 - 21200683
Alignment:
Q  44 aatatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    |||| ||||| ||||||||| ||||||||||||||| | |||| ||| |||| ||| |||||||| ||||||||    
T  21200756 aataccatatttctatccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtct 21200683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 27917639 - 27917570
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| || ||||| |||||||| ||||||| | || |||||||| ||||||| ||||||||||||||    
T  27917639 gtcttctttctacatgtccaaaccatctaagcctatttcctaccatcttttctactataggtgctacccc 27917570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 2340812 - 2340864
Alignment:
Q  65 tcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    |||||||| |||||| | |||||||| |||| |||||||||||||||||||||    
T  2340812 tcattaatctctagatctttcttaatagtttctcttatagttttcctaggtct 2340864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 31337751 - 31337807
Alignment:
Q  162 catgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    ||||| |||||||| |||||| |||||| |||||| ||||||| |||||||||||||    
T  31337751 catgctcaaaccacttaagcctagtttcaaccatcttttctactataggtgctaccc 31337807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 31454441 - 31454504
Alignment:
Q  151 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgcta 215  Q
    ||||||||| |||||| ||||||||| ||| | ||||||||||||| ||||||| ||||||||||    
T  31454441 tcttctctctacatgcacaaaccacc-aagtctagtttctaccatcttttctactataggtgcta 31454504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 39600883 - 39600963
Alignment:
Q  139 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||| ||||||||||  ||||||| |||||||||||||    |||| |||||| ||||||| |||||| |||||||    
T  39600883 agaatctacaggtcttctctttacatgccaaaaccacctaagcttgttttccaccatcttttctactataggtactacccc 39600963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 43308769 - 43308697
Alignment:
Q  45 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    ||||||||||||||||||| | |||||| ||||||   |||||||| |||| |||| ||||||| ||||||||    
T  43308769 atatcatatctctatccaactgattaatctctagatttttcttaatagtttctcttgtagtttttctaggtct 43308697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 46431754 - 46431822
Alignment:
Q  45 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctag 113  Q
    |||| |||||||||||||| |||||||| |||||| | || ||||| |||| |||||||||||| ||||    
T  46431754 atataatatctctatccaactcattaatctctagatcttttttaatagtttctcttatagtttttctag 46431822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 46431868 - 46431925
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttc 189  Q
    |||||||| ||||||||| | || |||||  |||||||||||||||||||||||||||||    
T  46431868 ccttactacagaatctacagatcctctct--acatgcccaaaccacctaagccgagtttc 46431925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 48508312 - 48508272
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagcc 182  Q
    |||||||||||||||||| |||||||||||||| |||||||    
T  48508312 atctacgggtcttctctctacatgcccaaaccatctaagcc 48508272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 45289285 - 45289375
Alignment:
Q  131 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac--gataggtgctacccc 219  Q
    ||||||| | |||||||  || ||||||| || ||||||||||||||||||| | |||| |||||| |||||||   ||||||||||||||    
T  45289285 cttactacaaaatctacaagtgttctctctacgtgcccaaaccacctaagcctattttccaccatcttttctactgaataggtgctacccc 45289375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 31209065 - 31208979
Alignment:
Q  132 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||| |||||||||  | ||||||||  | | |||||||||||||| | ||||||  | |||| |||||||||||||||||||||    
T  31209065 ttactacagaatctacaaggcttctctcctcgttcccaaaccacctaaactgagttttcagcatcttttctacgataggtgctaccc 31208979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 31453151 - 31453221
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttc-tacgataggtgctacccc 219  Q
    |||||||||| ||||||| |||| ||||||| | ||||||||||||| |||| ||| ||||||||| ||||    
T  31453151 gtcttctctctacatgccaaaacaacctaagtctagtttctaccatcttttcttactataggtgctgcccc 31453221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 33272235 - 33272289
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 204  Q
    |||||||||| |||||||||||||| ||||||| | ||||||||| | |||||||    
T  33272235 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctac 33272289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 36304067 - 36303994
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 204  Q
    |||||||| || |||||| ||||||||||| |||||||||| ||| |||| || |||||| |||||| |||||||    
T  36304067 ccttactaaagcatctacaggtcttctctctacatgcccaacccatctaa-cctagtttccaccatcttttctac 36303994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 44443397 - 44443479
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||||||| ||||||||   |||||||||| |||||  ||||| || ||||||||||||| |||||| |||||| | ||||||    
T  44443397 ccttactacagaatctaaaagtcttctctctacatgtgcaaactacttaagccgagtttccaccatcttttctatggtaggtg 44443479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 49841688 - 49841622
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||||||||| ||| ||||||||||||| || | |||||| |||||| ||||||  |||||||||||    
T  49841688 gtcttctctctacacgcccaaaccaccttagtctagtttccaccatcttttctaatataggtgctac 49841622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 50249476 - 50249384
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaac---cacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| |||||||||  |||||| ||| ||||||||||||   |||||||| | |||||| |||||| ||||||| ||| | ||||||||    
T  50249476 ccttactaaagaatctacatgtcttcactctacatgcccaaaccaccacctaagtctagtttccaccatcttttctactatacgcgctacccc 50249384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 34719265 - 34719354
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| | |||| || || |||||||| | |||  |||| ||||||||  || |||| |||||| ||||||||||||||||||||||    
T  34719265 ccttactacaaaatcaacaggccttctctctatatgttcaaaacacctaagttgactttccaccatcttttctacgataggtgctacccc 34719354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 36868450 - 36868503
Alignment:
Q  163 atgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||||||||||||||||||| | |||| |||||| | ||||| |||||||||||    
T  36868450 atgcccaaaccacctaagcctactttccaccatcttctctaccataggtgctac 36868503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 38850188 - 38850123
Alignment:
Q  151 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    ||||||||| |||||||||||||| ||||| | | ||||||||| | ||||||| ||| |||||||    
T  38850188 tcttctctctacatgcccaaaccatctaagtctattttctaccaacttttctactatatgtgctac 38850123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 40981975 - 40981914
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttct 202  Q
    ||||| || ||||||||||||||||||||||  |||||||  ||||||| |||||| |||||    
T  40981975 aatctccgtgtcttctctcaacatgcccaaagtacctaagttgagtttccaccatcttttct 40981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 44443279 - 44443348
Alignment:
Q  45 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctagg 114  Q
    |||||||||| |||||||| |||| ||| |||||| | |||||||  |||| |||||||||||| |||||    
T  44443279 atatcatatccctatccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctagg 44443348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 37227991 - 37227931
Alignment:
Q  156 tctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||| ||||||  |||||||||||||||||||||  ||||  |||||||||||| ||||||    
T  37227991 tctctacatgcagaaaccacctaagccgagtttccgccattttttctacgatagctgctac 37227931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 37351474 - 37351422
Alignment:
Q  152 cttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 204  Q
    |||||||| |||||||||||||||  ||| | ||||||||||||| |||||||    
T  37351474 cttctctccacatgcccaaaccactcaagtctagtttctaccatcttttctac 37351422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 46140519 - 46140447
Alignment:
Q  132 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 204  Q
    |||||| ||||||||| ||||||||||| | ||| ||||||||||| || | |||||| ||| || |||||||    
T  46140519 ttactacagaatctacaggtcttctctctatatgtccaaaccacctgagtctagtttccaccgtcttttctac 46140447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 5258351 - 5258432
Alignment:
Q  140 gaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  5258351 gaatctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 5258432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 33084128 - 33084058
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||| |||| ||||||||||||||| | ||||||||||||| ||||||| ||||||||||||||    
T  33084128 ggtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctaccataggtgctacccc 33084058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 9593900 - 9593988
Alignment:
Q  131 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| || ||||||  |||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| |  |||||||||||    
T  9593900 cttactacagcatctacatgtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactaatggtgctacccc 9593988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 21870299 - 21870355
Alignment:
Q  163 atgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||    
T  21870299 atgcccaaaccacctaagccgagtttctaccatcttttctactacaggtgctacccc 21870355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 28085450 - 28085374
Alignment:
Q  145 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  28085450 tacgggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 28085374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 5631899 - 5631820
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| ||||| |||||||| ||||||  | ||||||||| | ||||||| ||||||| ||||||||    
T  5631899 atctacgggtcttctctctacatgtccaaaccatctaagcatattttctaccaacttttctactataggtgttaccccca 5631820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 32755998 - 32755919
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||| ||||||||| ||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  32755998 atcttcgggtcttccctctacatgaccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 32755919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 24665888 - 24665818
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggt 211  Q
    ||||||| ||||||||||| ||||| |||||||||||||||| | ||||||||||  ||||||| ||||||    
T  24665888 aatctacaggtcttctctctacatgtccaaaccacctaagcctattttctaccatattttctactataggt 24665818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 20427841 - 20427920
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||  ||| |  ||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  20427841 atctacgggtcttctctatacacgttcaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 20427920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 30031333 - 30031254
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||| |||||||||||| ||||| ||||  || ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  30031333 atctatgggtcttctctctacatgtccaactcatctaagcctattttctaccaacttttctactataggtgctaccccca 30031254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 33997623 - 33997702
Alignment:
Q  49 catatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctc 128  Q
    ||||| ||||||||| |||||||| ||||| |  |||||||| |||| |||||||||||||| |||||| | ||||||||    
T  33997623 catatttctatccaactcattaatctctaggcttttcttaatagtttctcttatagttttccaaggtcttcctctgcctc 33997702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 7150514 - 7150579
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccat 195  Q
    |||||||| | |||||||  ||||||||||  |||||||||||||||||| ||||||||| |||||    
T  7150514 ccttactatataatctacaagtcttctctccccatgcccaaaccacctaatccgagtttccaccat 7150579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 608234 - 608158
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||| ||||||||||| ||||| |||||||| ||||||| | |||||| || | ||||||| ||||||| |||||    
T  608234 atctacaggtcttctctctacatgtccaaaccatctaagcctattttctatcaacttttctactataggtgataccc 608158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 12890642 - 12890582
Alignment:
Q  161 acatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||||||||||  |||||| | ||||||||| | ||||||| ||||||||||||||||    
T  12890642 acatgcccaaaccatgtaagcctattttctaccaacttttctactataggtgctaccccca 12890582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 34584 - 34663
Alignment:
Q  49 catatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctc 128  Q
    ||||| || |||||| |||||||| | |||| | |||||||| |||| |||||||||||| |||||||| | ||||||||    
T  34584 catatttcaatccaactcattaatctttagatctttcttaatggtttctcttatagtttttctaggtcttcctctgcctc 34663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 1747716 - 1747799
Alignment:
Q  45 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctc 128  Q
    ||||||||||| ||||||| |||||||| |||||| | ||||||   |||| |||||| ||||| |||||||| | ||||||||    
T  1747716 atatcatatctttatccaactcattaatctctagatccttcttaccagtttctcttatggtttttctaggtcttcctctgcctc 1747799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 4948539 - 4948586
Alignment:
Q  165 gcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||||||||||||||||||| |||| |||||| |||||||||| ||||    
T  4948539 gcccaaaccacctaagccgaatttccaccatcttttctacgatgggtg 4948586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 4955510 - 4955557
Alignment:
Q  165 gcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||||||||||||||||||| |||| |||||| |||||||||| ||||    
T  4955510 gcccaaaccacctaagccgaatttccaccatcttttctacgatgggtg 4955557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 30679483 - 30679421
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 204  Q
    |||||||||||| ||||| ||||||||||| || ||||||| | ||||||||| | |||||||    
T  30679483 atctacgggtctcctctctacatgcccaaatcatctaagcctattttctaccaacttttctac 30679421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 6641635 - 6641691
Alignment:
Q  163 atgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||| ||| ||| | ||||||||||||| ||||||| ||||||| ||||||    
T  6641635 atgcccaaacaacccaagtctagtttctaccatcttttctactataggtgatacccc 6641691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 7513616 - 7513668
Alignment:
Q  162 catgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgct 214  Q
    ||||||||||||||||||| | || |||||||||| ||||||  |||||||||    
T  7513616 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 7513668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 8364635 - 8364575
Alignment:
Q  156 tctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 216  Q
    |||| |||||||||||||||||||||| | |||| |||| | ||||||| |||| ||||||    
T  8364635 tctctacatgcccaaaccacctaagcctattttcaaccaccttttctactatagttgctac 8364575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 9749418 - 9749506
Alignment:
Q  131 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| | |||||||  | |||||||| |||| || ||||||||||| || |||||| ||| || ||||||||||||| | ||||||    
T  9749418 cttactataaaatctacatgacttctctctacatccctaaaccacctaaaccaagtttccaccttcttttctacgataggcggtacccc 9749506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 10617323 - 10617379
Alignment:
Q  59 tccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggt 115  Q
    ||||| |||||||| |||||| | |||||||| |||| |||||||||||| ||||||    
T  10617323 tccaactcattaatctctagatccttcttaatggtttctcttatagtttttctaggt 10617379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 21352049 - 21352117
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    ||||||||||| ||||| ||||| || ||||||| | |||||||||   ||||||| ||||||||||||    
T  21352049 ggtcttctctctacatgtccaaatcatctaagcctattttctaccaatttttctactataggtgctacc 21352117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 9e-20; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 12141633 - 12141544
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||||||||||| |||||||| || || |||||||||||||||||||   |||| |||||| ||||||| ||||||||||||||    
T  12141633 ccttactagagaatctacaggtcttctttctacgtgcccaaaccacctaagcctcttttccaccatcttttctactataggtgctacccc 12141544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 11017392 - 11017316
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 217  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||| || ||| ||||||| ||||||||||||    
T  11017392 aatctacgggtcttctctccacatacccaaaccacttaagccgagtttccacgatcttttctactataggtgctacc 11017316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 38452890 - 38452969
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| |||| |||||||||||    
T  38452890 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagatgctaccccca 38452969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 13240938 - 13241011
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 203  Q
    |||||||| |||||||||  |||||||||| |||||||||||||||||||||| |||||| |||||| ||||||    
T  13240938 ccttactaaagaatctacatgtcttctctctacatgcccaaaccacctaagcctagtttccaccatcttttcta 13241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 2610665 - 2610586
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | ||||||||| | |||| || ||||||||||||||||    
T  2610665 atctacgtgtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttccactataggtgctaccccca 2610586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 3866149 - 3866070
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||||| ||||||| ||||||| | ||||||||| | ||| ||| ||||||||||||||||    
T  3866149 atctacgggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttttactataggtgctaccccca 3866070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 8180850 - 8180778
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||||||| |||||||||||||| ||||||  | ||||||||| | ||||||| ||||||||||||||||    
T  8180850 ggtcttctctctacatgcccaaaccatctaagcttattttctaccaacttttctactataggtgctaccccca 8180778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 19235055 - 19235131
Alignment:
Q  41 tcaaatatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    ||||||| ||||| |||||||||||||||||| |||||| | |||| ||| |||| |||||||||||| ||||||||    
T  19235055 tcaaataccatatttctatccaaatcattaatctctagatctttctcaatagtttctcttatagtttttctaggtct 19235131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 25834751 - 25834679
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  25834751 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 25834679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 43238305 - 43238377
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||||||  |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  43238305 ggtcttctctttacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 43238377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 12734776 - 12734697
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||  ||||| |||||||| ||||||| | |||||||||   ||||||| ||||||||||||||||    
T  12734776 atctacgggtcttctctttacatgtccaaaccatctaagcctattttctaccaatttttctactataggtgctaccccca 12734697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 9647805 - 9647883
Alignment:
Q  133 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggt 211  Q
    ||||||||||||||| |||||||| |  ||||| |||||||||||||  | |||||| |||||||||||||| ||||||    
T  9647805 tactagagaatctacaggtcttctttttacatgtccaaaccacctaaagctagtttccaccatcatttctactataggt 9647883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 24583837 - 24583907
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 212  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||  |||||||    
T  24583837 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtg 24583907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 43752159 - 43752229
Alignment:
Q  149 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||| ||||| ||||| |||||||||| | ||||||||| | ||||||| ||||||||||||||    
T  43752159 ggtcttctctctacatgtccaaatcacctaagcctattttctaccaccttttctactataggtgctacccc 43752229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 44437934 - 44438008
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccccaact 224  Q
    |||||||||| ||||||| |||||||||| | | ||||||||||||| ||||||| ||||| | |||||||||||    
T  44437934 gtcttctctctacatgccgaaaccacctatgtctagtttctaccatcttttctactataggggttacccccaact 44438008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 45367830 - 45367908
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccc 220  Q
    |||||||||||||||||| ||||| |||||||| |||||   | ||||||||| | ||||||| |||||||||||||||    
T  45367830 atctacgggtcttctctctacatgtccaaaccatctaaggttattttctaccaacttttctactataggtgctaccccc 45367908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 36183528 - 36183451
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||||||||||| ||||||| |||||| |||||   | ||||||||| | ||||||| ||||||||||||||    
T  36183528 atctacgggtcttctctctacatgccgaaaccaactaagattattttctaccaacttttctactataggtgctacccc 36183451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 41763247 - 41763324
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||| |||||||||||  |||| |||||||||||||||| | ||||||||| | ||||||| ||||||| ||||||    
T  41763247 atctacaggtcttctctctgcatgtccaaaccacctaagcctattttctaccaacttttctactataggtgttacccc 41763324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 11992313 - 11992389
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||||||||||||| | ||| |||||||| ||||||  | ||||||||| | ||||||| |||||||||||||    
T  11992313 atctacgggtcttctctctatatgtccaaaccatctaagcttattttctaccaacttttctactataggtgctaccc 11992389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 14197361 - 14197437
Alignment:
Q  136 tagagaatctacgggtcttctctcaacatgcccaaaccacct-aagccgagtttctaccatcatttctacgataggt 211  Q
    ||||||||||||  |||||| ||| ||||||||||||||||| ||||| |||||| |||||| ||||||| ||||||    
T  14197361 tagagaatctacaagtcttcactctacatgcccaaaccacctaaagcctagtttccaccatcttttctactataggt 14197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 38429958 - 38429882
Alignment:
Q  145 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||||||||||  ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||| ||||||    
T  38429958 tacgggtcttctctttacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctgccccca 38429882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 41197433 - 41197509
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||| ||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||  |||||||||||||    
T  41197433 atctacggatcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattataggtgctaccc 41197509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 41858818 - 41858746
Alignment:
Q  132 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 204  Q
    ||||||||||| ||||  |||||||||| ||||| |||||||| ||||||| |||||| |||||| |||||||    
T  41858818 ttactagagaacctacatgtcttctctctacatgtccaaaccatctaagcccagtttccaccatcttttctac 41858746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 1456282 - 1456231
Alignment:
Q  167 ccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||| |||||||||||||||| |||||| |||||| ||||||||||||||    
T  1456282 ccaaactacctaagccgagtttccaccatcttttctaggataggtgctaccc 1456231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 3243858 - 3243937
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||||||||||||||| |||| ||||||||| ||||||| | |||| | || | ||| ||| ||||||||||||||||    
T  3243858 atctacgggtcttctctctacattcccaaaccatctaagcctattttccatcaacttttttactataggtgctaccccca 3243937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 18424582 - 18424661
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||||||| |||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| |||| |||||| ||||    
T  18424582 atctacgggtcgtctctctacatgtccaaaccatctaagcctattttctaccaacttttctactatagatgctacaccca 18424661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 11412807 - 11412721
Alignment:
Q  133 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||| ||||||||| | |||| |||| | |||||||||| ||||||||| | |||| |||||  ||||||| ||||||||||||||    
T  11412807 tactacagaatctacagttcttatctctaaatgcccaaacaacctaagcctattttccaccatattttctactataggtgctacccc 11412721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 16097192 - 16097270
Alignment:
Q  143 tctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||| ||||||||||| ||||| ||||| || ||||||| | ||||||||| | ||||||  ||||||||||||||||    
T  16097192 tctacaggtcttctctctacatgtccaaatcatctaagcctattttctaccaacttttctattataggtgctaccccca 16097270  T

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Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 38435041 - 38434951
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaa-gccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| || ||||||  |||||||||  |||||||||||||||| || | | |||||| |||||| ||||||| ||||||||||||||    
T  38435041 ccttactaaagcatctacaagtcttctctttacatgcccaaaccacccaaagtctagtttccaccatcttttctactataggtgctacccc 38434951  T

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Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 451853 - 451905
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctacca 194  Q
    ||||||||||||| |||| |||||||||||||| ||||||| | |||||||||    
T  451853 atctacgggtcttttctctacatgcccaaaccatctaagcctattttctacca 451905  T

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Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 9556563 - 9556627
Alignment:
Q  131 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccat 195  Q
    ||||||| |||||||||  |||||||||| ||||||| |||||||||||||| | |||| |||||    
T  9556563 cttactacagaatctacttgtcttctctctacatgcctaaaccacctaagcctattttccaccat 9556627  T

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Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 18188848 - 18188780
Alignment:
Q  151 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||  |||||||||||||||||||| |||| ||| |||||| ||||||  | ||||||||||||    
T  18188848 tcttctctttacatgcccaaaccacctaagtcgagcttccaccatcttttctagaagaggtgctacccc 18188780  T

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Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 18958959 - 18958907
Alignment:
Q  167 ccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||||||||| | |||| |||||| ||||||| ||||||||||||||    
T  18958959 ccaaaccacctaagcctattttccaccatcttttctactataggtgctacccc 18958907  T

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Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 4807672 - 4807594
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||||| |||||||||| | ||||| |||| | ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  4807672 atctacgagtcttctctctatatgccgaaactatctaagccta-tttctaccaacttttctactataggtgctaccccca 4807594  T

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Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 12026209 - 12026264
Alignment:
Q  141 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatc 196  Q
    ||||||| ||||||||||| |||||  ||||||||||||||| |||||| ||||||    
T  12026209 aatctacaggtcttctctctacatggtcaaaccacctaagcctagtttccaccatc 12026264  T

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Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 12882267 - 12882322
Alignment:
Q  164 tgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||||||||||||||| | ||||||||||| ||||||  ||||||||| ||||    
T  12882267 tgcccaaaccacctaagcctattttctaccatcttttctagtataggtgctgcccc 12882322  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 4598775 - 4598844
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    ||||||| || | ||| |||||||||| ||| | ||||||||||||| || |||| ||||||||||||||    
T  4598775 gtcttctttctatatgtccaaaccaccaaagtctagtttctaccatctttactactataggtgctacccc 4598844  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 37481830 - 37481899
Alignment:
Q  150 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||||| |||||| ||||||||||||||| || ||| |||||| ||| ||| |||||  |||||||    
T  37481830 gtcttctctctacatgctcaaaccacctaagcctaggttcaaccatcttttttactataggaactacccc 37481899  T

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Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 38264422 - 38264370
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccat 195  Q
    |||||| ||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  38264422 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccat 38264370  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 42092606 - 42092517
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||||| | |||||||  | |||||||| ||||||||| | ||||||| |  ||||||||||||| ||||||  ||||| ||||||||    
T  42092606 ccttactacaaaatctacaagccttctctctacatgcccagatcacctaatcttagtttctaccatcttttctagtataggcgctacccc 42092517  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 43260493 - 43260436
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtt 187  Q
    |||||||| |||||||||  ||||| |||  |||||||||||||||||||||| ||||    
T  43260493 ccttactatagaatctacaagtcttttcttcacatgcccaaaccacctaagcctagtt 43260436  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 3481230 - 3481178
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagcc 182  Q
    |||| ||| ||||||||  ||||||||||| ||||| ||||||||||||||||    
T  3481230 ccttgctacagaatctataggtcttctctctacatgtccaaaccacctaagcc 3481178  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 26784419 - 26784487
Alignment:
Q  49 catatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    ||||| ||||| ||| |||||||| |||| | | |||||||| |||| |||||||||||| ||||||||    
T  26784419 catatttctattcaactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtct 26784487  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 33287608 - 33287556
Alignment:
Q  65 tcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 117  Q
    |||||||| |||||| | |||||||| |||| |||||||||||| ||||||||    
T  33287608 tcattaatttctagatctttcttaatagtttctcttatagtttttctaggtct 33287556  T

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Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 43832303 - 43832243
Alignment:
Q  47 atcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttt 107  Q
    ||||||||  ||||||| |||||||| |||||| | |||||||| |||| |||||||||||    
T  43832303 atcatatccttatccaactcattaatctctagatccttcttaatagtttctcttatagttt 43832243  T

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Target: scaffold0325 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 11866 - 11802
Alignment:
Q  151 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgcta 215  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  11866 tcttctctctacatgcccaaaccacctaagccgagttcctaccatcttttctacaataggtgcta 11802  T

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Target: scaffold0570 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 1153 - 1229
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 218  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| |||||||||||||    
T  1153 atctacgggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 1229  T

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Target: scaffold0113 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 11810 - 11880
Alignment:
Q  151 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    |||||| || ||||||||||| || ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  11810 tcttctgtctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctaccccca 11880  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 82798 - 82719
Alignment:
Q  142 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 221  Q
    ||||| || ||||||||| | ||| ||||| || ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  82798 atctatggatcttctctctatatgtccaaatcatctaagcccattttctaccaacttttctactataggtgctaccccca 82719  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 346966 - 347019
Alignment:
Q  130 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccg 183  Q
    |||||||| ||||||||  ||| ||||||| |||| ||||||||||||||||||    
T  346966 ccttactacagaatctataggttttctctctacatacccaaaccacctaagccg 347019  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 4477 - 4553
Alignment:
Q  143 tctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 219  Q
    |||||| ||||||| || |||||||||||| | ||||||| | ||| ||||| | ||||||| |||||||| |||||    
T  4477 tctacgagtcttctttctacatgcccaaactatctaagcctattttttaccaacttttctactataggtgccacccc 4553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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