View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6865A_low_329 (Length: 213)
Name: NF6865A_low_329
Description: NF6865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6865A_low_329 |
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Alignment Details
Target: chr8 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 12122742 - 12122859
Alignment:
| Q |
92 |
ccagaaaatgataagctgggagaggggaaacacgtgagatagaggacagactatcaaaatagagggacataatgaagattactttagacagaatccataa |
191 |
Q |
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| T |
12122742 |
ccagaaaatgataagctgggagaggggaaacacgtgagatagaggacagactatcaaaatagagagacataatgaagattactttagacagaatccataa |
12122841 |
T |
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| Q |
192 |
aaccaataacaccaaact |
209 |
Q |
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||||||||||||| |||| |
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| T |
12122842 |
aaccaataacaccgaact |
12122859 |
T |
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