View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6865A_low_349 (Length: 204)
Name: NF6865A_low_349
Description: NF6865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6865A_low_349 |
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Alignment Details
Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 31698969 - 31698805
Alignment:
| Q |
19 |
tcagatccaaggagtgtattttttggtttatcacacaatcacaaagggtgcaaatgtcttgcaagatggttgcatctgggcatttaagtatgttatgtta |
118 |
Q |
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| T |
31698969 |
tcagatccaaggagtgtatttttgggtttatcacacaatcacaaagggtgcaaatgtcttgcaagatggttgcatctgggcatttaaggatgttatgtta |
31698870 |
T |
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| Q |
119 |
aatgagtattggtttccatatccaatcctatttcacacttcttctatgtctccatctacctcttcat |
185 |
Q |
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| T |
31698869 |
aatgagtattggtttccatatccaatcctatttcacacttcttc--tgtctccatctacctcttcat |
31698805 |
T |
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