View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6865A_low_352 (Length: 203)
Name: NF6865A_low_352
Description: NF6865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6865A_low_352 |
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Alignment Details
Target: chr2 (Bit Score: 179; Significance: 8e-97; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 179; E-Value: 8e-97
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 37492329 - 37492131
Alignment:
| Q |
1 |
ggattggatcagaatggatcggattggacggaacacagcttctgtaatctgaactgctttgctccttatccttagccatttcaagtaaaacaaccaaagg |
100 |
Q |
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| T |
37492329 |
ggattggatcggaatggatcggattggacggaacacagcttctgtaatctgaactgctttgctccttatcctttgccatttcaagtaaaacaaccaaaga |
37492230 |
T |
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| Q |
101 |
aatcaaagcatcattacaaaaataagagtagcatcattctaatttgaaattaaatgtaaacagaatgatcttaaccactatgcagtatgcacatacacc |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
37492229 |
aatcaaagcatcattacaaaaataagagtagcatcattctgatttgaaattaaatgtaaacagaatgattttaaccactatgcagtatgcacatacacc |
37492131 |
T |
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