View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6866A_low_190 (Length: 265)
Name: NF6866A_low_190
Description: NF6866A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6866A_low_190 |
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Alignment Details
Target: chr4 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 22362285 - 22362536
Alignment:
| Q |
1 |
ggtattttgagcggagaataatcgccaccatccaatgcactgctccaaccatatgcatttcggaaatcaggttttctatcataaagattgtaagagtcag |
100 |
Q |
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| T |
22362285 |
ggtattttgagcggagaataatcgccaccatccaatgcactgctccaaccatatgcatttcggaaatcaggttttctatcatagagattgtaagagtcag |
22362384 |
T |
|
| Q |
101 |
gggaatcagctctgtctttattctctatcttcttcttctcttttcctaatacatttttcatgagctttctccatgaccaacttgtttgcttctcctcttc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
22362385 |
gggaatcagctctgtctttattctctatcttcttcttctcttttcctaatacatttttcatgagcttcctccatgaccaacttgtttgcttctcctcttc |
22362484 |
T |
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| Q |
201 |
ctcttcttcttgtctttgtaccaatgtcttaaggtgttgcactttgttattc |
252 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
22362485 |
ctcttcttcttgtctttgtaccaatgtcttaaggtgttgcactttgtcattc |
22362536 |
T |
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