View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6866A_low_191 (Length: 265)
Name: NF6866A_low_191
Description: NF6866A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6866A_low_191 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 7 - 256
Target Start/End: Original strand, 9443303 - 9443552
Alignment:
| Q |
7 |
taagatatgtgattttatggaaaattgcatccaaagttgtttctaactcgaaactagaacttttagtttttgtctctaccattgatttttattcttaaat |
106 |
Q |
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| T |
9443303 |
taagatatgtgattttatggaaaattgcttccaaagttgattctaactcgaaactagaacttatagtttttgtctctaccattgatttttattcttaaat |
9443402 |
T |
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| Q |
107 |
ttatcgtttagttttagcgcatgtttgttaacctggtatactaccatgatttttgcgaagccggaaatcagagagttgggaaacatacgaacaaacactg |
206 |
Q |
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|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9443403 |
ttatggtttagttttagcgcatgtttgtaaacctggtatactaccatgatttttgcgaagccggaaatcagagagttgggaaacatacgaacaaacactg |
9443502 |
T |
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| Q |
207 |
atgtagccatgattaattttttataaccaattcattcaaattatattttt |
256 |
Q |
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| T |
9443503 |
atgtagccatgattaagtttttataaccaattcattcaaactatattttt |
9443552 |
T |
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