View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6866A_low_195 (Length: 261)
Name: NF6866A_low_195
Description: NF6866A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6866A_low_195 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 7 - 255
Target Start/End: Original strand, 43797898 - 43798146
Alignment:
| Q |
7 |
gattcggaagttgtggtgaaaaatttagagggatgtaatcctactagtgtagtgggttggtgcttaattaacaagattcttagtttgctttcgatggatt |
106 |
Q |
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| T |
43797898 |
gattcggaagttgtggtgaaaaatttaaagggatgtaatcctactagtgtagtgggttggtgcttaattaacaagattcttagtttgcttgcgatggatt |
43797997 |
T |
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| Q |
107 |
gggaggttagagtttgtgactagtattgtgcagctaattgatgtgtttatgctcttgttaatatggggtgcgatagcgaggacgcttgaatactttttga |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43797998 |
gggaggttagagtttgtgactagtattgtgcagctaattaatgtgtttatgctcttgttaatatggggtgcgatagcgaggacgcttgaatactttttga |
43798097 |
T |
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| Q |
207 |
gttatgtcttgttcaaactagttggttcgtcattattgatattcttgga |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||| || ||||| |
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| T |
43798098 |
gttatgtcttgttcaaactagttggttcgtcattattgatgttgttgga |
43798146 |
T |
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