View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6866A_low_306 (Length: 232)

Name: NF6866A_low_306
Description: NF6866A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6866A_low_306
NF6866A_low_306
[»] chr2 (16 HSPs)
chr2 (1-213)||(8579553-8579765)
chr2 (3-213)||(9061209-9061419)
chr2 (143-212)||(9364511-9364580)
chr2 (1-93)||(17566149-17566241)
chr2 (1-122)||(10347740-10347861)
chr2 (143-213)||(7115835-7115905)
chr2 (1-123)||(8573571-8573693)
chr2 (143-213)||(9284380-9284450)
chr2 (64-121)||(9291899-9291956)
chr2 (144-213)||(10335738-10335807)
chr2 (1-40)||(7611976-7612015)
chr2 (80-123)||(9274475-9274518)
chr2 (1-40)||(9364665-9364704)
chr2 (152-214)||(8573725-8573787)
chr2 (152-213)||(9291804-9291865)
chr2 (1-101)||(12018954-12019054)
[»] chr3 (2 HSPs)
chr3 (1-213)||(39427495-39427719)
chr3 (1-123)||(37462443-37462565)
[»] chr4 (2 HSPs)
chr4 (1-125)||(561174-561298)
chr4 (147-212)||(561066-561131)
[»] chr5 (2 HSPs)
chr5 (1-125)||(36224364-36224494)
chr5 (144-200)||(36224295-36224351)
[»] chr1 (4 HSPs)
chr1 (151-213)||(29423147-29423209)
chr1 (143-213)||(29453494-29453564)
chr1 (151-213)||(29467978-29468040)
chr1 (151-210)||(29443519-29443578)
[»] chr7 (3 HSPs)
chr7 (152-210)||(45243555-45243613)
chr7 (152-210)||(45230293-45230351)
chr7 (1-120)||(45243656-45243775)
[»] chr8 (1 HSPs)
chr8 (156-213)||(41966911-41966968)


Alignment Details
Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 8579553 - 8579765
Alignment:
Q  1 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8579553 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttgtgttattctagtga 8579652  T
Q  101 tagaagtaaatttctgttggaagtaaaaggtgatctctatagagattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaa 200  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8579653 tagaagtaaagttctgttggaagtaaaaggtaatctctatagagattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaa 8579752  T
Q  201 ggaattcctaatt 213  Q
    |||||||||||||    
T  8579753 ggaattcctaatt 8579765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 213
Target Start/End: Original strand, 9061209 - 9061419
Alignment:
Q  3 tatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtgata 102  Q
    ||||||| ||||||||||||||||||| | |||||||| |   | ||||| ||||||  |||||||   | ||||| ||| ||||||||||||||||||     
T  9061209 tatggatctagagatagttggtgtaaactttttactttggttaaatcgtgtttcaattcacctttggactttttgaggccgttatgttattctagtgatg 9061308  T
Q  103 gaagtaaatttctgttggaagtaaaaggtgatctctatagagattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaagg 202  Q
    || ||||  |||||||||||| |||   | |  |  ||| |  |  || |||||||||||||||||||||||| |||||| |||||| || |||| ||||    
T  9061309 gaggtaaggttctgttggaagcaaatcctaacttggataaaactcttaggaagctgttttggtatgatctcaagagtgaacaagttagttatgttgaagg 9061408  T
Q  203 aattcctaatt 213  Q
    |||||||||||    
T  9061409 aattcctaatt 9061419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 9364580 - 9364511
Alignment:
Q  143 agattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaat 212  Q
    |||| ||||||||||||||||||| |||||||| |||||| | |||||| |||||| |||||||||||||    
T  9364580 agatcgtaagaagctgttttggtacgatctcaagagtgaaaacgttactagtgttccaggaattcctaat 9364511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 17566149 - 17566241
Alignment:
Q  1 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttatt 93  Q
    |||||||||||||||||| |||||||||||||||||| || |  || | | | |||| || |||||||| || ||||||||||||||||||||    
T  17566149 aatatggatttagagataattggtgtaaattgtttaccttgggcgagtggcgtttcagtatacctttgatatatttgaagcctttatgttatt 17566241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 10347861 - 10347740
Alignment:
Q  1 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtga 100  Q
    ||||||||| ||||||||||||||||||| | |||||| | |  || ||||| ||| ||  |||||||| ||  |||| |||  ||||||||||||||||    
T  10347861 aatatggatgtagagatagttggtgtaaactttttactatggctgagtcgtgtttcgatttacctttgaaattgttgaggcccatatgttattctagtga 10347762  T
Q  101 tagaagtaaatttctgttggaa 122  Q
    | |||||||  |||||||||||    
T  10347761 tggaagtaaggttctgttggaa 10347740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 7115835 - 7115905
Alignment:
Q  143 agattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 213  Q
    |||||||| ||||||| ||||||||||| | || || ||| |||||| ||||||| |||||||||||||||    
T  7115835 agattgtaggaagctggtttggtatgatttgaagagcgaacaagttagttgtgttgaaggaattcctaatt 7115905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 8573571 - 8573693
Alignment:
Q  1 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtga 100  Q
    ||||||| | ||||||||||||||||||| | |||||||| |   | ||||| |||| |  || ||| | ||||| || ||||||| |||||||||||||    
T  8573571 aatatggttctagagatagttggtgtaaactttttactttcgttaaatcgtgtttcactccacattttaaatcttcgaggcctttaggttattctagtga 8573670  T
Q  101 tagaagtaaatttctgttggaag 123  Q
    | |||||||  ||||||||||||    
T  8573671 tggaagtaaggttctgttggaag 8573693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 9284380 - 9284450
Alignment:
Q  143 agattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 213  Q
    |||||||||||||||| ||||||||||| | || |||||  |||||| || |||| |||||||||||||||    
T  9284380 agattgtaagaagctggtttggtatgatttgaagagtgagcaagttatttatgttgaaggaattcctaatt 9284450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 9291956 - 9291899
Alignment:
Q  64 ctttgagatctttgaagcctttatgttattctagtgatagaagtaaatttctgttgga 121  Q
    |||||| |||||||| |||||||||||||||||| ||| |||||||  ||||||||||    
T  9291956 ctttgaaatctttgaggcctttatgttattctagggatggaagtaaggttctgttgga 9291899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 10335807 - 10335738
Alignment:
Q  144 gattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 213  Q
    |||||||||||| |||||||||||||| | || |||||| || ||| || |||| |||||||||||||||    
T  10335807 gattgtaagaagttgttttggtatgatttgaagagtgaacaaattagttatgttgaaggaattcctaatt 10335738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 7612015 - 7611976
Alignment:
Q  1 aatatggatttagagatagttggtgtaaattgtttacttt 40  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  7612015 aatatggattaaaagatagttggtgtaaattgtttacttt 7611976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 123
Target Start/End: Complemental strand, 9274518 - 9274475
Alignment:
Q  80 gcctttatgttattctagtgatagaagtaaatttctgttggaag 123  Q
    |||||||||||||||||||||| |||||||  ||||||||||||    
T  9274518 gcctttatgttattctagtgatggaagtaaggttctgttggaag 9274475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9364704 - 9364665
Alignment:
Q  1 aatatggatttagagatagttggtgtaaattgtttacttt 40  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  9364704 aatatggattaaaagatagttggtgtaaattgtttacttt 9364665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 8573725 - 8573787
Alignment:
Q  152 gaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaattg 214  Q
    ||||||||||||||||||| | || |||||| |||| | || |||| ||||||||||||||||    
T  8573725 gaagctgttttggtatgatttgaagagtgaacaagtcagttatgttgaaggaattcctaattg 8573787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 9291865 - 9291804
Alignment:
Q  152 gaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 213  Q
    ||||||||||||||||||| | || |||||| || ||| || |||| |||||||||||||||    
T  9291865 gaagctgttttggtatgatttgaagagtgaacaaattagttatgttgaaggaattcctaatt 9291804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12018954 - 12019054
Alignment:
Q  1 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtga 100  Q
    ||||||||| ||||||||||||||||||| | ||||||||   ||| ||||| |||  |  |||||| |||| |||||  |||||| ||||||| |||||    
T  12018954 aatatggatgtagagatagttggtgtaaactttttactttgatggaatcgtgtttcgttttaccttttagatttttgagccctttaggttattcgagtga 12019053  T
Q  101 t 101  Q
    |    
T  12019054 t 12019054  T

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Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 39427719 - 39427495
Alignment:
Q  1 aatatggatttagagatagttggtgtaaattgtttacttttga---ggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctag 97  Q
    ||||||||| |||| |||||||||||||||||||||||||||    ||| | ||| ||||||  |||||| |  ||||||||||||||||||||||| ||    
T  39427719 aatatggatatagatatagttggtgtaaattgtttacttttgtaggggaatggtgtttcaattcacctttaatgtctttgaagcctttatgttattccag 39427620  T
Q  98 tgatagaagtaaatttctgttggaagtaaaa------ggtgatctctatagagattgt---aagaagctgttttggtatgatctcaaaagtgaagaagtt 188  Q
    ||||||||||||| |||||||||||||||||      |||||| || | || |||  |   |||||||||||||||||| ||||||||||| |  |||||    
T  39427619 tgatagaagtaaagttctgttggaagtaaaatttaggggtgatttcaagagtgatcctaagaagaagctgttttggtattatctcaaaagttataaagtt 39427520  T
Q  189 acttgtgttcaaggaattcctaatt 213  Q
    || | ||||| | ||||||||||||    
T  39427519 acctatgttccaagaattcctaatt 39427495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 37462565 - 37462443
Alignment:
Q  1 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtga 100  Q
    ||||||||| ||||||||||||||||||| | | |||| | ||  | ||||| |||| |  |||||||| |||||||| |||||||||||||||||||||    
T  37462565 aatatggatctagagatagttggtgtaaactttgtactgtggataaatcgtgtttcacttcacctttgaaatctttgaggcctttatgttattctagtga 37462466  T
Q  101 tagaagtaaatttctgttggaag 123  Q
    | |||||||  || |||||||||    
T  37462465 tggaagtaaggttttgttggaag 37462443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 561298 - 561174
Alignment:
Q  1 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtga 100  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||   ||  |||| || |||||| | | | | |||||||||| |||||||| ||||    
T  561298 aatatggatttagagatagttggtgtgtattgtttactttggaggaagtgtttttcagtagaccttttacaccatggaagcctttaggttattctggtga 561199  T
Q  101 tagaagtaaatttctgttggaagta 125  Q
    |||||||||| ||||||||||||||    
T  561198 tagaagtaaagttctgttggaagta 561174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 561131 - 561066
Alignment:
Q  147 tgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaat 212  Q
    ||||| ||| ||||||||||||||||||||||| ||  || ||| ||||||| |||||||||||||    
T  561131 tgtaaaaagttgttttggtatgatctcaaaagtaaaagagctacctgtgttccaggaattcctaat 561066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 36224494 - 36224364
Alignment:
Q  1 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaaccttt------gagatctttgaagcctttatgttattc 94  Q
    ||||||||||||||||||||||||||||||||||||||||   ||| | ||  ||| ||  ||||||      || |||||||||||||| |||||||||    
T  36224494 aatatggatttagagatagttggtgtaaattgtttactttgtgggaatggtatttcgattcaccttttaaattgatatctttgaagccttcatgttattc 36224395  T
Q  95 tagtgatagaagtaaatttctgttggaagta 125  Q
     ||||||||||||||| ||||||||||||||    
T  36224394 cagtgatagaagtaaagttctgttggaagta 36224364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 36224351 - 36224295
Alignment:
Q  144 gattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaa 200  Q
    |||| |||||||  |||||||||| ||||||||||| | |||||||| |||||||||    
T  36224351 gattctaagaaggagttttggtattatctcaaaagttatgaagttacctgtgttcaa 36224295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 29423209 - 29423147
Alignment:
Q  151 agaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 213  Q
    ||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||    
T  29423209 agaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatt 29423147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 29453494 - 29453564
Alignment:
Q  143 agattgtaagaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 213  Q
    ||||||| ||||||||||||||||||||||||| |||||| |||||| ||||||| |||||||||||||||    
T  29453494 agattgtgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttgaaggaattcctaatt 29453564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 29467978 - 29468040
Alignment:
Q  151 agaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 213  Q
    ||||| ||||||||||||||||||| |||||| | |||| || |||| |||||||||||||||    
T  29467978 agaagttgttttggtatgatctcaagagtgaacatgttaattatgttgaaggaattcctaatt 29468040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 29443519 - 29443578
Alignment:
Q  151 agaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattccta 210  Q
    ||||||||||||||||||||||||| ||||||   |||| || |||| ||||||||||||    
T  29443519 agaagctgttttggtatgatctcaagagtgaatgtgttagttatgttgaaggaattccta 29443578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 45243613 - 45243555
Alignment:
Q  152 gaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattccta 210  Q
    |||||||||||||||||||||||| |||||| || |||||| |||||||||||||||||    
T  45243613 gaagctgttttggtatgatctcaacagtgaacaacttacttatgttcaaggaattccta 45243555  T

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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 45230351 - 45230293
Alignment:
Q  152 gaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattccta 210  Q
    ||||||||||||||||||| |||| |||||| ||||||||  |||||||||||||||||    
T  45230351 gaagctgttttggtatgatttcaagagtgaacaagttactcatgttcaaggaattccta 45230293  T

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Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 45243775 - 45243656
Alignment:
Q  1 aatatggatttagagatagttggtgtaaattgtttacttttgaggattcgtgcttcaataaacctttgagatctttgaagcctttatgttattctagtga 100  Q
    ||||||| | |||||||| |||||||||| | |||||||| |   | ||||| ||||||   | ||||  |||||||| ||||||||||||||| |||||    
T  45243775 aatatggttctagagatatttggtgtaaactttttactttggttaaatcgtgtttcaattttcatttggaatctttgaggcctttatgttattcgagtga 45243676  T
Q  101 tagaagtaaatttctgttgg 120  Q
    | |||||||| |||||||||    
T  45243675 tcgaagtaaagttctgttgg 45243656  T

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Target: chr8 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 41966911 - 41966968
Alignment:
Q  156 ctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatt 213  Q
    ||||||||||||||| | || |||||| || |||||| |||| |||||||||||||||    
T  41966911 ctgttttggtatgatttgaagagtgaacaaattacttatgttgaaggaattcctaatt 41966968  T

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