View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6867A_low_114 (Length: 335)
Name: NF6867A_low_114
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6867A_low_114 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 22 - 234
Target Start/End: Original strand, 44999142 - 44999350
Alignment:
| Q |
22 |
tagagaggcacacaaaccaagctatgggcgcaacaagcctacatacatcaacataaacaagtttatgaattataatagaacacaatcatatatagaagga |
121 |
Q |
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| T |
44999142 |
tagagaggcacacaaaccaagctatgggcgcaacaagcctacatacatcaacataaacaagtttatgaattataatagaacacaatcatatatagaagga |
44999241 |
T |
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| Q |
122 |
aggaaaaaataaataaataaagaaatgtgagaacgttatatagaaatgggaacctccattgccacaatccactgaggacaatttgatccataaactccaa |
221 |
Q |
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| T |
44999242 |
aggaaaaaataaataaat----aaatgtgagaacgttatatagaaatgggaacctccattgccacaatccactgaggacaatttgatccataaactccaa |
44999337 |
T |
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| Q |
222 |
ttcgtgagcccta |
234 |
Q |
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||||||||||||| |
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| T |
44999338 |
ttcgtgagcccta |
44999350 |
T |
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