View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6867A_low_12 (Length: 488)

Name: NF6867A_low_12
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6867A_low_12
NF6867A_low_12
[»] chr5 (2 HSPs)
chr5 (1-463)||(17917172-17917634)
chr5 (274-355)||(22406029-22406110)
[»] chr7 (9 HSPs)
chr7 (6-378)||(48798624-48798996)
chr7 (243-378)||(2081707-2081842)
chr7 (253-355)||(7587724-7587826)
chr7 (253-355)||(16209127-16209229)
chr7 (10-60)||(2082025-2082075)
chr7 (253-339)||(12324652-12324738)
chr7 (287-355)||(11587277-11587345)
chr7 (255-339)||(21259328-21259412)
chr7 (268-355)||(11522661-11522748)
[»] scaffold0315 (1 HSPs)
scaffold0315 (279-374)||(12327-12422)
[»] chr8 (2 HSPs)
chr8 (376-463)||(18674459-18674548)
chr8 (376-463)||(17281096-17281185)
[»] chr6 (4 HSPs)
chr6 (284-378)||(12448042-12448136)
chr6 (268-378)||(25803401-25803511)
chr6 (270-355)||(19895776-19895861)
chr6 (282-345)||(12040859-12040922)
[»] scaffold0037 (1 HSPs)
scaffold0037 (253-355)||(111505-111607)
[»] chr4 (2 HSPs)
chr4 (255-355)||(16389984-16390084)
chr4 (281-355)||(15701524-15701598)
[»] chr3 (2 HSPs)
chr3 (268-380)||(24194310-24194422)
chr3 (281-355)||(294460-294534)
[»] scaffold0226 (1 HSPs)
scaffold0226 (255-355)||(8778-8878)
[»] scaffold0004 (1 HSPs)
scaffold0004 (273-355)||(356687-356769)
[»] scaffold0190 (1 HSPs)
scaffold0190 (253-354)||(17976-18077)
[»] scaffold0059 (1 HSPs)
scaffold0059 (270-355)||(51356-51441)
[»] chr2 (1 HSPs)
chr2 (279-339)||(21529195-21529255)


Alignment Details
Target: chr5 (Bit Score: 419; Significance: 0; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 1 - 463
Target Start/End: Original strand, 17917172 - 17917634
Alignment:
Q  1 tcatcactttgagctggttgtggacaatagaactgagaagaaaggaaaaggcattgcttttgcagcaaatactactgaagaagaggcatatggagacatt 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17917172 tcataactttgagctggttgtggacaatagaactgagaagaaaggaaaaggcattgcttttgcagcaaatactactgaagaagaggcatatggagacatt 17917271  T
Q  101 gcagatgatgagaatttcttagagaatttagttttacttggaagacagttcaataggatgatgaaacaggtaagtaggagatctagatgtggtggtcaga 200  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17917272 gcagatgatgagaatttctcagagaatttagttttacttggaagacagttcaataggatgatgaaacaggtaagtaggagatctagaggtggtggtcaga 17917371  T
Q  201 acatcagatacaacatcgataagcaacagagcaatggaagaaatgacagagttgatgaaaagaacaatcaatacaaaagtgttcaatgtcatgaatgtga 300  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17917372 acatcagatacaacattgataagcaacagagcaatggaagaaatgatagagttgatgaaaagaacaatcaatacaaaggtgttcaatgtcatgaatgtga 17917471  T
Q  301 aggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaaggaataattgtgtcttggtctgagggggagtgattatgtgaatgt 400  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||| |||||||||    
T  17917472 aggttatggacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaaggaatgattgtgtcttggtttgagtgggagtgattctgtgaatgt 17917571  T
Q  401 tttgcagttgcaaatgtatatggaaacctctttttcaatatctgtgaatgtttgatggaaggt 463  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17917572 tttgcagttgcaaatgtatatggaaacctctttttcaatatctgtgaatgtttgatggaaggt 17917634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 274 - 355
Target Start/End: Original strand, 22406029 - 22406110
Alignment:
Q  274 caaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaa 355  Q
    |||| ||||||||||||||||||||||||| ||||  || |||||||| ||||||||||||||| | ||||| |||||||||    
T  22406029 caaaggtgttcaatgtcatgaatgtgaaggatatggtcatatcagaacagaatgtgctacttttttgaagaaacaaaagaaa 22406110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 6 - 378
Target Start/End: Original strand, 48798624 - 48798996
Alignment:
Q  6 actttgagctggttgtggacaatagaactgagaagaaaggaaaaggcattgcttttgcagcaaatactactgaagaagaggcatatggagacattgcaga 105  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  48798624 actttgagatggttgtggacaatagaaccgagaagaaaggaaaaggcattgcttttgcagcaaatactactgaagaagaggcatatggagacattgtaga 48798723  T
Q  106 tgatgagaatttcttagagaatttagttttacttggaagacagttcaataggatgatgaaacaggtaagtaggagatctagatgtggtggtcagaacatc 205  Q
    ||||||  |||||| |||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  48798724 tgatgattatttctcagagaatttagttttacttgaaaggcagttcaatatgatgatgaaacaggtaagtaggagatctagaggtggtggtcagaacatc 48798823  T
Q  206 agatacaacatcgataagcaacagagcaatggaagaaatgacagagttgatgaaaagaacaatcaatacaaaagtgttcaatgtcatgaatgtgaaggtt 305  Q
    ||||||||||| ||||||||||| | ||||||||  ||||||||| |||||||||||||||| ||||||||| |||| |||||||||||||||||||  |    
T  48798824 agatacaacattgataagcaacataacaatggaaagaatgacagaattgatgaaaagaacaaccaatacaaaggtgtccaatgtcatgaatgtgaagagt 48798923  T
Q  306 atgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaaggaataattgtgtcttggtctga 378  Q
    ||| ||  || |||||||||||||||||||  |||||||| || || || |  || |||||||||||||||||    
T  48798924 atggacttattagaactgaatgtgctacttacctcaagaaacagaacaaggatatgattgtgtcttggtctga 48798996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 243 - 378
Target Start/End: Complemental strand, 2081842 - 2081707
Alignment:
Q  243 atgacagagttgatgaaaagaacaatcaatacaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaa 342  Q
    ||||||||| |||||||||||| | ||| |||||| | || ||||| |||||||||||||||||||  || ||||||||||||||||| || ||||||||    
T  2081842 atgacagaggtgatgaaaagaatagtcagtacaaaggagtacaatgccatgaatgtgaaggttatgggcatatcagaactgaatgtgcaacctttctcaa 2081743  T
Q  343 gaagcaaaagaaaggaataattgtgtcttggtctga 378  Q
    ||| |||||||| || || |||||| |||| |||||    
T  2081742 gaaacaaaagaatgggatgattgtggcttgatctga 2081707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 355
Target Start/End: Original strand, 7587724 - 7587826
Alignment:
Q  253 tgatgaaaagaacaatcaatacaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaag 352  Q
    |||||| || |||||||||| |||  | ||||||||||||||||||||||| ||||   ||||||||||||||||||| ||||| |||||||| || |||    
T  7587724 tgatgacaataacaatcaatccaagggagttcaatgtcatgaatgtgaaggatatggttacatcagaactgaatgtgccactttcctcaagaaacagaag 7587823  T
Q  353 aaa 355  Q
    |||    
T  7587824 aaa 7587826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 355
Target Start/End: Original strand, 16209127 - 16209229
Alignment:
Q  253 tgatgaaaagaacaatcaatacaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaag 352  Q
    |||||| ||||||  |||||||||| | ||||||||||||||||||||||||||||  ||||| | ||  |||||||||| |||||| |||||  |||||    
T  16209127 tgatgagaagaactttcaatacaaaggcgttcaatgtcatgaatgtgaaggttatggtcacattaaaatagaatgtgctagttttcttaagaaataaaag 16209226  T
Q  353 aaa 355  Q
    |||    
T  16209227 aaa 16209229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 2082075 - 2082025
Alignment:
Q  10 tgagctggttgtggacaatagaactgagaagaaaggaaaaggcattgcttt 60  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  2082075 tgagcttgttgttgacaacagaactgagaagaaaggaaaaggcattgcttt 2082025  T

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Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 12324738 - 12324652
Alignment:
Q  253 tgatgaaaagaacaatcaatacaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttct 339  Q
    ||||||||||||   |||||||||| |||||||||||||||| |||||||| ||||  || ||||||||  |||||||  |||||||    
T  12324738 tgatgaaaagaattctcaatacaaaggtgttcaatgtcatgagtgtgaaggatatgggcatatcagaacataatgtgcctcttttct 12324652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 11587345 - 11587277
Alignment:
Q  287 tgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaa 355  Q
    |||||||| |||||||| ||||  ||||| ||||| |||||| | |||||| |||||||||||||||||    
T  11587345 tgtcatgagtgtgaaggatatggtcacattagaacagaatgtaccacttttatcaagaagcaaaagaaa 11587277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 21259412 - 21259328
Alignment:
Q  255 atgaaaagaacaatcaatacaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttct 339  Q
    |||| ||||| | |||||||||  ||||| |||||||||||||||||||  |||  ||||||||||| |||||||| || |||||    
T  21259412 atgagaagaatactcaatacaagggtgtttaatgtcatgaatgtgaaggccatggtcacatcagaacagaatgtgccacctttct 21259328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 355
Target Start/End: Original strand, 11522661 - 11522748
Alignment:
Q  268 tcaatacaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaa 355  Q
    |||||||||| | || |||||||||||||||||||||||||  || || |||   ||||||| ||||||||| ||||| || ||||||    
T  11522661 tcaatacaaaggagtgcaatgtcatgaatgtgaaggttatggtcatattagagtagaatgtgttacttttcttaagaaacagaagaaa 11522748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 12327 - 12422
Alignment:
Q  279 gtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaaggaataattgtgtcttggt 374  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12327 gtgtccaatgtcatgaatgtgaaggttatggacacataagaactgaatgtgctacttttctcaagaagcaaaagaaaggaatgattgtgtcttggt 12422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 376 - 463
Target Start/End: Complemental strand, 18674548 - 18674459
Alignment:
Q  376 tgagggggagtgattatgtgaatgttttgcagttgcaaatgtatatggaaacctcttttt--caatatctgtgaatgtttgatggaaggt 463  Q
    ||||||||||||||| |||||||||| |||| |||||||||||||||||||  | |||||  ||||||||||||||||||||||||||||    
T  18674548 tgagggggagtgattctgtgaatgttctgcaattgcaaatgtatatggaaatttattttttccaatatctgtgaatgtttgatggaaggt 18674459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 376 - 463
Target Start/End: Complemental strand, 17281185 - 17281096
Alignment:
Q  376 tgagggggagtgattatgtgaatgttttgcagttgcaaatgtatatggaaacctcttttt--caatatctgtgaatgtttgatggaaggt 463  Q
    ||||||||| ||||| |||||||||| ||||||||||| ||||||||||||  | |||||  || ||||||||||||||| |||||||||    
T  17281185 tgagggggattgattctgtgaatgttctgcagttgcaagtgtatatggaaatttattttttccagtatctgtgaatgttttatggaaggt 17281096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 378
Target Start/End: Original strand, 12448042 - 12448136
Alignment:
Q  284 caatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaaggaataattgtgtcttggtctga 378  Q
    ||||| |||||||||||| ||||||  |||||||||||||||||||  || ||||||||||||||||||||||| || |||||||| ||||||||    
T  12448042 caatgccatgaatgtgaaagttatggtcacatcagaactgaatgtgaaacctttctcaagaagcaaaagaaagggatgattgtgtcctggtctga 12448136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 378
Target Start/End: Complemental strand, 25803511 - 25803401
Alignment:
Q  268 tcaatacaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaaggaataattgtg 367  Q
    |||||||||| |||||||||| |||||||||||||| ||||  || ||||| || |||||||||||||| || ||||| || |||||| |  |||||||     
T  25803511 tcaatacaaaggtgttcaatgccatgaatgtgaaggatatggtcatatcaggacagaatgtgctactttactaaagaaacagaagaaaagcttaattgtt 25803412  T
Q  368 tcttggtctga 378  Q
    || ||||||||    
T  25803411 tcctggtctga 25803401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 19895776 - 19895861
Alignment:
Q  270 aatacaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaa 355  Q
    |||||||| |||||||||| |||||||||||||| ||||  || || ||||| |||||||| | |||||| ||||| || ||||||    
T  19895776 aatacaaaggtgttcaatgccatgaatgtgaagggtatgggcatattagaacagaatgtgcaaattttctaaagaaacagaagaaa 19895861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Original strand, 12040859 - 12040922
Alignment:
Q  282 ttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaa 345  Q
    ||||||||||||| |||||||| ||||  || |||| ||| ||||||||||||||||| |||||    
T  12040859 ttcaatgtcatgagtgtgaaggatatggccatatcataacagaatgtgctacttttctaaagaa 12040922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 253 - 355
Target Start/End: Original strand, 111505 - 111607
Alignment:
Q  253 tgatgaaaagaacaatcaatacaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaag 352  Q
    |||||| ||||||  |||||||||| ||||||||||||||||||||||||| ||||  || ||||| ||  |||||||||||||||| ||||| ||||||    
T  111505 tgatgagaagaactgtcaatacaaaggtgttcaatgtcatgaatgtgaaggatatggccatatcagtacaaaatgtgctacttttctgaagaaacaaaag 111604  T
Q  353 aaa 355  Q
    |||    
T  111605 aaa 111607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 255 - 355
Target Start/End: Complemental strand, 16390084 - 16389984
Alignment:
Q  255 atgaaaagaacaatcaatacaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaa 354  Q
    |||| ||||||  |||||||||| ||||||||||||||||||||||| | ||||| || |||||||| ||||||| ||||||||  ||||| ||||||||    
T  16390084 atgagaagaactctcaatacaaaggtgttcaatgtcatgaatgtgaaagatatgaccatatcagaacagaatgtgttacttttcagaagaaacaaaagaa 16389985  T
Q  355 a 355  Q
    |    
T  16389984 a 16389984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 355
Target Start/End: Original strand, 15701524 - 15701598
Alignment:
Q  281 gttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaa 355  Q
    ||||| ||||||||||||||||| |||| |||||| || ||  ||||||| || ||||||||||| |||||||||    
T  15701524 gttcagtgtcatgaatgtgaaggatatgtacacattaggacgaaatgtgccacatttctcaagaaacaaaagaaa 15701598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 380
Target Start/End: Complemental strand, 24194422 - 24194310
Alignment:
Q  268 tcaatacaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaaggaataattgtg 367  Q
    |||||||||| | || |||||||||||||||||||||||||| || || ||| | ||||||||||||||||| ||||| || |||||| |  ||| ||      
T  24194422 tcaatacaaaggagtgcaatgtcatgaatgtgaaggttatgatcatattagaccagaatgtgctacttttcttaagaaacagaagaaaagcttaactgct 24194323  T
Q  368 tcttggtctgagg 380  Q
    |||||||||||||    
T  24194322 tcttggtctgagg 24194310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 281 - 355
Target Start/End: Complemental strand, 294534 - 294460
Alignment:
Q  281 gttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaa 355  Q
    ||||||||||||||||||||||| ||||  ||||| ||||| ||||||||||||| ||| ||||| |||||||||    
T  294534 gttcaatgtcatgaatgtgaaggatatggtcacattagaacagaatgtgctacttatcttaagaaacaaaagaaa 294460  T

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Target: scaffold0226 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 355
Target Start/End: Original strand, 8778 - 8878
Alignment:
Q  255 atgaaaagaacaatcaatacaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaa 354  Q
    |||||| ||||  ||| |||||| | ||||||||| ||||||||||||| ||||  || |||||||| ||||||||||||||||| ||||| || |||||    
T  8778 atgaaatgaactctcattacaaaggagttcaatgttatgaatgtgaaggatatggccatatcagaacagaatgtgctacttttctaaagaaacagaagaa 8877  T
Q  355 a 355  Q
    |    
T  8878 a 8878  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 355
Target Start/End: Original strand, 356687 - 356769
Alignment:
Q  273 acaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaa 355  Q
    ||||| ||||||||||||||||||||||||| ||||  || || ||||| || |||||||||||| | ||||| |||||||||    
T  356687 acaaaggtgttcaatgtcatgaatgtgaaggatatgggcatattagaacagagtgtgctacttttatgaagaaacaaaagaaa 356769  T

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Target: scaffold0190 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 354
Target Start/End: Original strand, 17976 - 18077
Alignment:
Q  253 tgatgaaaagaacaatcaatacaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaag 352  Q
    |||||||| ||||  ||| |||||| | |||||||||||||||||| |||| |||   || ||||||||  |||||||||||||||| ||||| ||||||    
T  17976 tgatgaaatgaactctcattacaaaggagttcaatgtcatgaatgttaaggatattggcatatcagaacataatgtgctacttttctaaagaaacaaaag 18075  T
Q  353 aa 354  Q
    ||    
T  18076 aa 18077  T

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Target: scaffold0059 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 355
Target Start/End: Original strand, 51356 - 51441
Alignment:
Q  270 aatacaaaagtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttctcaagaagcaaaagaaa 355  Q
    |||||||| ||||||| || |||||||||||||| ||||  || |||||||| |||||||| || ||||| ||||| || ||||||    
T  51356 aatacaaaggtgttcagtgccatgaatgtgaagggtatgggcatatcagaacagaatgtgcaacatttctaaagaaacagaagaaa 51441  T

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Target: chr2 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 21529255 - 21529195
Alignment:
Q  279 gtgttcaatgtcatgaatgtgaaggttatgaacacatcagaactgaatgtgctacttttct 339  Q
    ||||||||||||||||||||||||| ||||  || || ||||| |||| || |||||||||    
T  21529255 gtgttcaatgtcatgaatgtgaaggatatggtcatattagaacagaatatgatacttttct 21529195  T

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