View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6867A_low_130 (Length: 317)
Name: NF6867A_low_130
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6867A_low_130 |
 | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 29)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 10127081 - 10126796
Alignment:
| Q |
16 |
catcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgc |
115 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10127081 |
catcaagattattgctatcccaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgc |
10126982 |
T |
|
| Q |
116 |
cttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
215 |
Q |
| |
|
|||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10126981 |
cttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcccaaacctcccatgcccaaaattgcaacaacacct |
10126882 |
T |
|
| Q |
216 |
atattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
10126881 |
atattattatgggatgtgtctctctgagatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattc |
10126796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 10663679 - 10663394
Alignment:
| Q |
16 |
catcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgc |
115 |
Q |
| |
|
||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10663679 |
catcaagatctttgctatcccaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgc |
10663580 |
T |
|
| Q |
116 |
cttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
215 |
Q |
| |
|
|||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10663579 |
cttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
10663480 |
T |
|
| Q |
216 |
atattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
10663479 |
atattattatgggttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccatgagagattc |
10663394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 9839014 - 9838729
Alignment:
| Q |
16 |
catcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgc |
115 |
Q |
| |
|
|||||||||||||||| ||| | ||| |||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| || |
|
|
| T |
9839014 |
catcaagattattgctatcccatgttatggaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccacgc |
9838915 |
T |
|
| Q |
116 |
cttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
215 |
Q |
| |
|
| ||| |||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838914 |
cctcatatcaaaatgttgttgaacttcttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
9838815 |
T |
|
| Q |
216 |
atattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838814 |
atattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
9838729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 9849892 - 9849607
Alignment:
| Q |
16 |
catcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgc |
115 |
Q |
| |
|
|||||||||||||||| ||| | ||| |||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| || |
|
|
| T |
9849892 |
catcaagattattgctatcccatgttatggaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccacgc |
9849793 |
T |
|
| Q |
116 |
cttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
215 |
Q |
| |
|
| ||| |||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849792 |
cctcatatcaaaatgttgttgaacttcttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
9849693 |
T |
|
| Q |
216 |
atattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849692 |
atattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
9849607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 10580754 - 10580469
Alignment:
| Q |
16 |
catcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgc |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
10580754 |
catcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccacgc |
10580655 |
T |
|
| Q |
116 |
cttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
215 |
Q |
| |
|
||||| ||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580654 |
cttcatgtcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
10580555 |
T |
|
| Q |
216 |
atattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
||||| |||||| |||||| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
10580554 |
atattattatggattgtgtttctctgtgatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattc |
10580469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 10032156 - 10031871
Alignment:
| Q |
16 |
catcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgc |
115 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |
|
|
| T |
10032156 |
catcaagatctttgctatccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaagcccaggc |
10032057 |
T |
|
| Q |
116 |
cttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
215 |
Q |
| |
|
|||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10032056 |
cttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
10031957 |
T |
|
| Q |
216 |
atattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
||||| ||||||| || |||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||| |
|
|
| T |
10031956 |
atattattatgggatgcgtctctctgtgatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgagagattc |
10031871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 301
Target Start/End: Original strand, 10363714 - 10363999
Alignment:
| Q |
16 |
catcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgc |
115 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10363714 |
catcaagattattgctttccgaagttatggaagtggcagattcaaggagagactttgttactctcataatatcaaaatcctcagagacacaaacccatgc |
10363813 |
T |
|
| Q |
116 |
cttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
215 |
Q |
| |
|
|||||||||||||||||||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10363814 |
cttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacct |
10363913 |
T |
|
| Q |
216 |
atattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
||||| || | |||||| ||||| | || |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
10363914 |
atattattgtcggttgtttctctctttgaaagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattc |
10363999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 19 - 301
Target Start/End: Complemental strand, 10088940 - 10088658
Alignment:
| Q |
19 |
caagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcctt |
118 |
Q |
| |
|
|||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10088940 |
caagatcattgctatccgaagttgtcgaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcctt |
10088841 |
T |
|
| Q |
119 |
caaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctata |
218 |
Q |
| |
|
|||||||||||| |||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10088840 |
caaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctata |
10088741 |
T |
|
| Q |
219 |
ttgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
|| || | |||||| ||||| | || |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| |
|
|
| T |
10088740 |
ttattgtcggttgtttctctctttgaaagcaacatgttcattattgtctctttatcatccttcctacccaccatgacagattc |
10088658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 10184395 - 10184110
Alignment:
| Q |
16 |
catcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgc |
115 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||| || |
|
|
| T |
10184395 |
catcaagattattgctatcccaagttgtggaagtgacagattcaaggagagacttggttactctcataatatcaaaatcctcggacacacaagcccacgc |
10184296 |
T |
|
| Q |
116 |
cttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
215 |
Q |
| |
|
| ||| |||||||||||||||| ||| || |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10184295 |
cctcatatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
10184196 |
T |
|
| Q |
216 |
atattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
||| ||||||||||||||||| || || |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
10184195 |
atagcattatgggttgtgtctctctgtgacagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattc |
10184110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 19 - 301
Target Start/End: Complemental strand, 10195823 - 10195541
Alignment:
| Q |
19 |
caagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcctt |
118 |
Q |
| |
|
|||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10195823 |
caagatcattgctatccgaagttgtcgaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcctt |
10195724 |
T |
|
| Q |
119 |
caaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctata |
218 |
Q |
| |
|
|||||||||||| |||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10195723 |
caaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctata |
10195624 |
T |
|
| Q |
219 |
ttgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
|| || | |||||| ||||| | || |||||||||||||||||||||||||| ||| |||| |||||||||| ||||||||| |
|
|
| T |
10195623 |
ttattgtcggttgtttctctctttgaaagcaacatgttcattattgtctctttatcatcctttctacccaccatgacagattc |
10195541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 301
Target Start/End: Original strand, 10375761 - 10376046
Alignment:
| Q |
16 |
catcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgc |
115 |
Q |
| |
|
|||||||||||||||| ||| | ||| | |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
10375761 |
catcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgc |
10375860 |
T |
|
| Q |
116 |
cttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
215 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10375861 |
cttcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgtgcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
10375960 |
T |
|
| Q |
216 |
atattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
||||| ||||| | ||||||| | | |||||||||||||||||||| || ||||| ||| ||||||||||||||| ||||||||| |
|
|
| T |
10375961 |
atattattatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattc |
10376046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 301
Target Start/End: Complemental strand, 11769386 - 11769102
Alignment:
| Q |
17 |
atcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcc |
116 |
Q |
| |
|
||||||||||||||| ||| ||||| | |||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
11769386 |
atcaagattattgctatcccaagttcttgaagtgaccgattcaaggagagacctggttactctcataatatcaaaatcctcagacacgcaagcccatgcc |
11769287 |
T |
|
| Q |
117 |
ttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacaccta |
216 |
Q |
| |
|
||||||||||||| ||||||| ||| || ||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11769286 |
ttcaaatcaaaatattgttgaacttctttatcattgtagacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacaccta |
11769187 |
T |
|
| Q |
217 |
tattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
|||| |||||| |||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| |
|
|
| T |
11769186 |
tattattatggattgtgtctctctgtgatagcaacatgttcattattgtctctttgtcattcttcctacccactatgacagattc |
11769102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 18 - 301
Target Start/End: Complemental strand, 10260849 - 10260566
Alignment:
| Q |
18 |
tcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcct |
117 |
Q |
| |
|
|||||||||||| | ||| || || | |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
10260849 |
tcaagattattgatatcccaatttctagaagtgactgattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccacgcct |
10260750 |
T |
|
| Q |
118 |
tcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
217 |
Q |
| |
|
||| ||||||||||||||| ||| || |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10260749 |
tcatgtcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
10260650 |
T |
|
| Q |
218 |
attgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
||| || | |||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
10260649 |
attattgttggttgtttctctctgtgatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattc |
10260566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 16 - 301
Target Start/End: Original strand, 10433960 - 10434245
Alignment:
| Q |
16 |
catcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgc |
115 |
Q |
| |
|
|||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||| |||||| ||| |||||||||||||| |||||||||| |||| || |
|
|
| T |
10433960 |
catcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaatcctgagacacacaagcccaggc |
10434059 |
T |
|
| Q |
116 |
cttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
215 |
Q |
| |
|
||||||||||||||| |||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10434060 |
cttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacct |
10434159 |
T |
|
| Q |
216 |
atattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
|| || ||||| ||||||| ||| || ||||||||||||||||||||||||||||||||| ||||||| || |||| || |||||| |
|
|
| T |
10434160 |
atcttattatgagttgtgtttctctgtgatagcaacatgttcattattgtctctttgtcatccttccttccaaccatgaaagattc |
10434245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 10077422 - 10077162
Alignment:
| Q |
16 |
catcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgc |
115 |
Q |
| |
|
||||||||| |||| | ||| ||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10077422 |
catcaagatcattgttatcccaagttctagaagtgatcgattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccatgc |
10077323 |
T |
|
| Q |
116 |
cttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
215 |
Q |
| |
|
|| |||||||||||| | | || |||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10077322 |
ctgcaaatcaaaatggtatcgaactttataatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
10077223 |
T |
|
| Q |
216 |
atattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcac |
276 |
Q |
| |
|
|| || ||||||||| | | | |||||||||||||||||||||||||||||||||| |
|
|
| T |
10077222 |
atcttattatgggttccgcccatccctgatagcaacatgttcattattgtctctttgtcac |
10077162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 17 - 291
Target Start/End: Original strand, 11130943 - 11131217
Alignment:
| Q |
17 |
atcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcc |
116 |
Q |
| |
|
||||||||||||| ||||| ||| | |||||||||||||||||||||| || |||||||| | ||||||||||||||| || |||||| ||||||| |
|
|
| T |
11130943 |
atcaagattattgttttcccaagcccttgaagtgacagattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgct |
11131042 |
T |
|
| Q |
117 |
ttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacaccta |
216 |
Q |
| |
|
|| | |||||| |||| |||| ||||||||||||||||| ||| ||| || ||||| |||||||| | ||||||||| || ||||||||||||||||| | |
|
|
| T |
11131043 |
ttgagatcaaagtgttcttgaactttttcatcattgtaagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaacaacaccga |
11131142 |
T |
|
| Q |
217 |
tattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccacca |
291 |
Q |
| |
|
||||||||| | | ||| || | ||||||||||||||| ||||||||||||||||| |||| ||||| |||| |
|
|
| T |
11131143 |
tattgttattgctagtgctgctctttgatagcaacatgttcgttattgtctctttgtcatcctttctaccaacca |
11131217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 17 - 291
Target Start/End: Original strand, 11148771 - 11149045
Alignment:
| Q |
17 |
atcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcc |
116 |
Q |
| |
|
||||||||||||| ||||| ||| | |||||||||||||||||||||| || |||||||| | ||||||||||||||| || |||||| ||||||| |
|
|
| T |
11148771 |
atcaagattattgttttcccaagcccttgaagtgacagattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgct |
11148870 |
T |
|
| Q |
117 |
ttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacaccta |
216 |
Q |
| |
|
|| | |||||| |||| |||| ||||||||||||||||| ||| ||| || ||||| |||||||| | ||||||||| || ||||||||||||||||| | |
|
|
| T |
11148871 |
ttgagatcaaagtgttcttgaactttttcatcattgtaagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaacaacaccga |
11148970 |
T |
|
| Q |
217 |
tattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccacca |
291 |
Q |
| |
|
||||||||| | | ||| || | ||||||||||||||| ||||| ||||||||||| |||| ||||| |||| |
|
|
| T |
11148971 |
tattgttattgctagtgctgctctttgatagcaacatgttcgttattatctctttgtcatcctttctaccaacca |
11149045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 299
Target Start/End: Original strand, 11159934 - 11160216
Alignment:
| Q |
17 |
atcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcc |
116 |
Q |
| |
|
||||||||||||| ||||| ||| | | ||||||||||||||||| |||| || ||||| | |||||||||||||||||| |||||| ||||||| |
|
|
| T |
11159934 |
atcaagattattggtttcccaagctcttgaagtgacagattcaagaagagttttagttacagataaaatatcaaaatcctcagatacacaagcccatgct |
11160033 |
T |
|
| Q |
117 |
ttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacaccta |
216 |
Q |
| |
|
|| ||||||||||| | |||| ||||||||| ||||||||||||||| || || || ||||| || | ||||||||| || |||||||||||||| |||| |
|
|
| T |
11160034 |
ttgaaatcaaaatgatcttgaactttttcattattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacgccta |
11160133 |
T |
|
| Q |
217 |
tattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagat |
299 |
Q |
| |
|
||||||||| | ||| || | ||||||||||||||||||||||||||||| ||| | || ||||| |||| ||||||| |
|
|
| T |
11160134 |
tattgttattgccagtgctactctctgatagcaacatgttcattattgtctctttatcatcatttctaccaaccatgacagat |
11160216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 301
Target Start/End: Complemental strand, 10889454 - 10889174
Alignment:
| Q |
21 |
agattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttca |
120 |
Q |
| |
|
||||||||| ||||| ||| | | ||||| ||||||||||| |||| || ||||| | | |||||||||||||||||| |||||| ||||||| || | |
|
|
| T |
10889454 |
agattattgttttcccaagctcttgaagtcacagattcaagaagagttttagttacagttaaaatatcaaaatcctcagatacacaagcccatgctttga |
10889355 |
T |
|
| Q |
121 |
aatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatatt |
220 |
Q |
| |
|
|||||| || | |||| ||||||||||||||||||||||||| || || || ||||| || | ||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
10889354 |
gatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacaccgatatt |
10889255 |
T |
|
| Q |
221 |
gttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
||||| | ||| || | ||||||||||||||||||||||||||||| ||| | || ||||| |||| ||||||||| |
|
|
| T |
10889254 |
gttattcctagtgctgctctctgatagcaacatgttcattattgtctctttatcatcatttctaccaaccatgacagattc |
10889174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 301
Target Start/End: Complemental strand, 8861438 - 8861154
Alignment:
| Q |
17 |
atcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcc |
116 |
Q |
| |
|
||||||||||||| ||||| ||| | | ||||||||||||||||| |||| || ||||| | ||||||||||||||| || |||||| ||||||| |
|
|
| T |
8861438 |
atcaagattattgttttcccaagctcttgaagtgacagattcaagaagagttttagttacagttgaaatatcaaaatcctctgatacacaagcccatgct |
8861339 |
T |
|
| Q |
117 |
ttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacaccta |
216 |
Q |
| |
|
|| | |||||| || | |||| ||||||||||||||||||||||||| || || || ||||| || | ||||||||| || ||||||||||||||||| | |
|
|
| T |
8861338 |
ttgagatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacaccga |
8861239 |
T |
|
| Q |
217 |
tattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
||||||||| | ||| || | ||||||||||||||||||| ||||||||| ||| | || ||||| |||| ||||||||| |
|
|
| T |
8861238 |
tattgttattcctagtgctgctctctgatagcaacatgttcattactgtctctttatcatcatttctaccaaccatgacagattc |
8861154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 51 - 225
Target Start/End: Complemental strand, 10527455 - 10527281
Alignment:
| Q |
51 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcat |
150 |
Q |
| |
|
|||||||||| ||||||||| |||||||||| || ||| |||||||| || ||| ||||||| ||||| | ||||||||| |||| | | |||||||||| |
|
|
| T |
10527455 |
acagattcaatgagagacttggttactctcacaacatcgaaatcctctgatacataaacccaggccttgagatcaaaatggtgttcaaccttttcatcat |
10527356 |
T |
|
| Q |
151 |
tgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
225 |
Q |
| |
|
||||||||||||| || ||||| ||||| || | ||||||||| ||||| |||||||||||||||| ||| |||| |
|
|
| T |
10527355 |
tgtaaacaagttgtgcaagggttgttttaccgacacctcccatacccaagattgcaacaacacctaaattattat |
10527281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 53 - 225
Target Start/End: Complemental strand, 10517580 - 10517408
Alignment:
| Q |
53 |
agattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcattg |
152 |
Q |
| |
|
||||||||||| |||||| ||| |||| |||| ||||||||||||||| ||||||||||| || || |||||||||||||||| | ||||| |||||||| |
|
|
| T |
10517580 |
agattcaaggatagacttggttgctctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattg |
10517481 |
T |
|
| Q |
153 |
taaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
225 |
Q |
| |
|
||||||| || || ||||| ||||| || | |||||||| |||| ||||||| ||||||||| ||| |||| |
|
|
| T |
10517480 |
taaacaaactgtgcaagggtcgttttaccgacgcctcccatacccacaattgcagcaacacctaaattattat |
10517408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 225
Target Start/End: Original strand, 11781954 - 11782128
Alignment:
| Q |
51 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcat |
150 |
Q |
| |
|
|||||||||||||||||||| |||| ||| | || ||| |||||||| || ||||||||||| | || |||||||||||||||| | |||| |||||| |
|
|
| T |
11781954 |
acagattcaaggagagacttggttattctaacaacatcgaaatcctccgatacacaaacccagactttgaaatcaaaatgttgttcaactttcacatcat |
11782053 |
T |
|
| Q |
151 |
tgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
225 |
Q |
| |
|
|||||||||| || || ||||| ||||| || | |||||||| ||||||||||| |||||||||| ||| |||| |
|
|
| T |
11782054 |
tgtaaacaagctgtgcaagggtcgttttaccgacgcctcccatacccaaaattgcgacaacacctaaattattat |
11782128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 51 - 225
Target Start/End: Complemental strand, 10500674 - 10500500
Alignment:
| Q |
51 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcat |
150 |
Q |
| |
|
||||||||||||||||| || |||| ||||| || ||| |||||||| | ||||||| ||||||||||| ||||||||||| || | ||| || || | |
|
|
| T |
10500674 |
acagattcaaggagagatttggttattctcacaacatcgaaatcctccggtacacaaatccatgccttcagatcaaaatgttcttcaattttatcgtcgt |
10500575 |
T |
|
| Q |
151 |
tgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
225 |
Q |
| |
|
||||||||||||| || || || ||||| || | |||||||| |||||||||||||||||||||| ||| |||| |
|
|
| T |
10500574 |
tgtaaacaagttgagcaagtgttgttttaccgacgcctcccatacccaaaattgcaacaacacctaaattattat |
10500500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 72 - 214
Target Start/End: Complemental strand, 13161077 - 13160935
Alignment:
| Q |
72 |
gttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgaggg |
171 |
Q |
| |
|
|||||||||| |||||| |||||||| || ||||||||||| | |||| ||||||||| | |||| ||| || |||||| |||| ||||||||| || | |
|
|
| T |
13161077 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13160978 |
T |
|
| Q |
172 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacc |
214 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
13160977 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
13160935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 72 - 214
Target Start/End: Complemental strand, 13171128 - 13170986
Alignment:
| Q |
72 |
gttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgaggg |
171 |
Q |
| |
|
|||||||||| |||||| |||||||| || ||||||||||| | |||| ||||||||| | |||| ||| || |||||| |||| ||||||||| || | |
|
|
| T |
13171128 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13171029 |
T |
|
| Q |
172 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacc |
214 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
13171028 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
13170986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 72 - 214
Target Start/End: Complemental strand, 13333001 - 13332859
Alignment:
| Q |
72 |
gttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgaggg |
171 |
Q |
| |
|
|||||||||| |||||| |||||||| || ||||||||||| | |||| ||||||||| | |||| ||| || |||||| |||| ||||||||| || | |
|
|
| T |
13333001 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13332902 |
T |
|
| Q |
172 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacc |
214 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
13332901 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
13332859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 214
Target Start/End: Complemental strand, 13344183 - 13344044
Alignment:
| Q |
75 |
actctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtag |
174 |
Q |
| |
|
||||||| |||||| |||||||| || ||||||||||| | |||| ||||||||| | |||| ||| || |||||| |||| ||||||||| || || | |
|
|
| T |
13344183 |
actctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtgg |
13344084 |
T |
|
| Q |
175 |
tttttcctaaacctcccatgcccaaaattgcaacaacacc |
214 |
Q |
| |
|
|||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
13344083 |
ttttgccaacaccgcccatacccaaaattgcaaccacacc |
13344044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 214
Target Start/End: Complemental strand, 13289762 - 13289620
Alignment:
| Q |
72 |
gttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgaggg |
171 |
Q |
| |
|
|||||||||| |||||| |||||||| || ||||||||||| | |||| ||||||||| | |||| ||| || |||||| |||| ||||||||| || | |
|
|
| T |
13289762 |
gttactctcaaaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13289663 |
T |
|
| Q |
172 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacc |
214 |
Q |
| |
|
| ||||| || | ||| ||||| ||||||||||| || ||||| |
|
|
| T |
13289662 |
tggttttgccaacaccgcccatacccaaaattgcgaccacacc |
13289620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 26907050 - 26906765
Alignment:
| Q |
16 |
catcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgc |
115 |
Q |
| |
|
|||||||||||||| | ||| ||||| |||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26907050 |
catcaagattattggtatcccaagttctggaagtgaccgattcaaggagagatttggttactctcataatatcaaaatcctcagacacacaaacccatgc |
26906951 |
T |
|
| Q |
116 |
cttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
215 |
Q |
| |
|
||||||||||||||| ||||| ||| || ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26906950 |
cttcaaatcaaaatgccgttgaacttctttatcattgtaaagaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacct |
26906851 |
T |
|
| Q |
216 |
atattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattc |
301 |
Q |
| |
|
||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
26906850 |
atattattatgggttgtgtctctctctgatagcaacatattcattattgtctctttgtcatccttcctacccaccatgacagattc |
26906765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 51 - 225
Target Start/End: Original strand, 17852895 - 17853069
Alignment:
| Q |
51 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcat |
150 |
Q |
| |
|
|||||||||||||||||||| |||||||||| || ||||||||| || || ||||||||||| || || | ||||||||| |||| | | |||||||||| |
|
|
| T |
17852895 |
acagattcaaggagagacttggttactctcacaacatcaaaatcttctgatacacaaacccaggctttgagatcaaaatgatgttcaaccttttcatcat |
17852994 |
T |
|
| Q |
151 |
tgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
225 |
Q |
| |
|
|||||||||| || || ||||| ||||| || | ||||||||| ||||| |||||||||||||||| |||||||| |
|
|
| T |
17852995 |
tgtaaacaagctgtgcaagggtcgttttaccgacacctcccatccccaatattgcaacaacacctaaattgttat |
17853069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 7128961 - 7129038
Alignment:
| Q |
86 |
atcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttg |
163 |
Q |
| |
|
||||||||| ||||| |||||||||||| ||||| |||||||||||||| ||| || |||||||| |||||||| |
|
|
| T |
7128961 |
atcaaaatcatcagaaacacaaacccattttttcaactcaaaatgttgttgcacttctttgtcattgtatacaagttg |
7129038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 225
Target Start/End: Complemental strand, 11485135 - 11484961
Alignment:
| Q |
51 |
acagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcat |
150 |
Q |
| |
|
|||||||||||||| ||||| |||| |||| | ||| |||||||| || |||||||||||||| || | ||||||||| |||| | |||||||||| | |
|
|
| T |
11485135 |
acagattcaaggagggacttggttatcctcacgacatcgaaatcctccgatacacaaacccatgctttgagatcaaaatgctgttcaactttttcatcgt |
11485036 |
T |
|
| Q |
151 |
tgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
225 |
Q |
| |
|
||||||||||||| || ||||| ||||| || | |||||||| ||||||||||||||||||||| ||| |||| |
|
|
| T |
11485035 |
tgtaaacaagttgtgcaagggtcgttttaccgacgcctcccataaccaaaattgcaacaacacctaaattattat |
11484961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 225
Target Start/End: Original strand, 44957664 - 44957834
Alignment:
| Q |
55 |
attcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcattgta |
154 |
Q |
| |
|
||||||| ||||||||||||| ||| | || || |||||||| || ||||| | |||||| || | ||| |||||||||| | ||||| ||||||||| |
|
|
| T |
44957664 |
attcaagaagagactttgttattctaacaacattgaaatcctctgatacacatatccatgctttgagatcgaaatgttgttcaacttttatatcattgta |
44957763 |
T |
|
| Q |
155 |
aacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
225 |
Q |
| |
|
||||||||| ||||| || ||||| || | ||||||||| || || | ||||||||||||| ||| |||| |
|
|
| T |
44957764 |
aacaagttgtgcgagagtcgttttaccgacacctcccatacctaaggtggcaacaacacctaaattattat |
44957834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 72 - 214
Target Start/End: Original strand, 135860 - 136002
Alignment:
| Q |
72 |
gttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgaggg |
171 |
Q |
| |
|
|||||||||| |||||| |||||||| || ||||||||||| | |||| ||||||||| | |||| ||| || |||||| |||| ||||||||| || | |
|
|
| T |
135860 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
135959 |
T |
|
| Q |
172 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacc |
214 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
135960 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
136002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 72 - 214
Target Start/End: Original strand, 145911 - 146053
Alignment:
| Q |
72 |
gttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgaggg |
171 |
Q |
| |
|
|||||||||| |||||| |||||||| || ||||||||||| | |||| ||||||||| | |||| ||| || |||||| |||| ||||||||| || | |
|
|
| T |
145911 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
146010 |
T |
|
| Q |
172 |
tagtttttcctaaacctcccatgcccaaaattgcaacaacacc |
214 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
146011 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
146053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 225
Target Start/End: Complemental strand, 29836767 - 29836587
Alignment:
| Q |
45 |
gaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgaccttttt |
144 |
Q |
| |
|
||||||||| |||||||||||| || |||||||||| ||||||||||| ||||||||||||||||| | | | ||||||||| | || | ||| || |
|
|
| T |
29836767 |
gaagtgacaacttcaaggagagatttggttactctcaacatatcaaaatcttcagacacacaaacccagacttgtacatcaaaatgatttttaacttctt |
29836668 |
T |
|
| Q |
145 |
catcattgtaaacaagttgggcgagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
225 |
Q |
| |
|
| | ||||| | |||| | |||||||| ||||| || | |||||||||||| |||||| || ||||||||||| |||| |
|
|
| T |
29836667 |
cctggttgtatataagtcgagcgagggtcgttttaccgatacctcccatgcctgtaattgcgactacacctatattattat |
29836587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 31679705 - 31679845
Alignment:
| Q |
72 |
gttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatcattgtaaacaagttgggcgaggg |
171 |
Q |
| |
|
||||| |||| || |||||| || || |||| ||||||||| || || | ||||||| ||| |||| | | || ||||||||||| |||||| || |||| |
|
|
| T |
31679705 |
gttaccctcaaaacatcaaactcttcggacagacaaacccaagcttttacatcaaaacgttcttgaacatctttatcattgtaaagaagttgagctaggg |
31679804 |
T |
|
| Q |
172 |
tagtttttcctaaacctcccatgcccaaaattgcaacaaca |
212 |
Q |
| |
|
||||| || | |||||||||||| ||||||| ||||||| |
|
|
| T |
31679805 |
ctgttttaccgacacctcccatgccgaaaattgaaacaaca |
31679845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 826028 - 825916
Alignment:
| Q |
49 |
tgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgccttcaaatcaaaatgttgttgacctttttcatc |
148 |
Q |
| |
|
||||||||||||| |||| ||||| | ||| ||||||||||||||| | ||||||||||| | |||||||||||||| | | | |||| | ||| |
|
|
| T |
826028 |
tgacagattcaagtagagcttttgtgattctagaaatatcaaaatcctcggtgacacaaacccagactttcaaatcaaaatgctcatcaactttcttatc |
825929 |
T |
|
| Q |
149 |
attgtaaacaagt |
161 |
Q |
| |
|
||||||||||||| |
|
|
| T |
825928 |
attgtaaacaagt |
825916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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