View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6867A_low_154 (Length: 298)
Name: NF6867A_low_154
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6867A_low_154 |
 |  |
|
| [»] scaffold0428 (5 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-115; HSPs: 18)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 31564840 - 31565117
Alignment:
| Q |
1 |
tctttgaattcttacataaggtttgtaatttttaaatgtctattctgtcccctttgaattgcagcaactatatcaccaacacttgcatgaaaaggcgcaa |
100 |
Q |
| |
|
||||| |||||||||||||| ||| || ||||||||||||||||| |||||||| |||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
31564840 |
tctttaaattcttacataagatttctattttttaaatgtctattccaccccctttggattgcagcaa-------accaacacttacatgaaaaggcgcaa |
31564932 |
T |
 |
| Q |
101 |
gcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattcacgattcacacatta |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
31564933 |
gcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcggtacatacattcacgattcacgcatta |
31565032 |
T |
 |
| Q |
201 |
gtgttctaattgaagtgaaatgtgaaacggactttatcggtagaagtgagaaattcaaggagtttgttcatgatcttgcaatgca |
285 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
31565033 |
gtgttctaattgaagtgaaatgtgaaacggactttatcggtagaagtgagaaattcaaggagttggttcatgatcttgcaatgca |
31565117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 88 - 298
Target Start/End: Complemental strand, 33414788 - 33414578
Alignment:
| Q |
88 |
tgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattcac |
187 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||| ||||||||||||| |
|
|
| T |
33414788 |
tgaaaaggcgcaagcatatctcaggaaaaagggtctctcatccgctgataagaaatccggaagactagcagctgaaggaagaatcggtacatacattcac |
33414689 |
T |
 |
| Q |
188 |
gattcacacattagtgttctaattgaagtgaaatgtgaaacggactttatcggtagaagtgagaaattcaaggagtttgttcatgatcttgcaatgcaag |
287 |
Q |
| |
|
||| ||| ||| ||||||||||||||||||| ||||||||||||||| | || ||||||||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
33414688 |
gatgcacgtattggtgttctaattgaagtgaactgtgaaacggactttgttggcagaagtgagaaattcaaggagttggttgatgatcttgcaatgcaag |
33414589 |
T |
 |
| Q |
288 |
ttgctgcttgt |
298 |
Q |
| |
|
||||||||||| |
|
|
| T |
33414588 |
ttgctgcttgt |
33414578 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 88 - 288
Target Start/End: Complemental strand, 33258416 - 33258215
Alignment:
| Q |
88 |
tgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacata-cattca |
186 |
Q |
| |
|
||||||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||| || | ||||||||||||| |||||| || || |
|
|
| T |
33258416 |
tgaaaagccgcaagcatatctcatcaaaaagggtctctcatccgctgataagaaatccgggagactagcagaagaaggaagaatcggtacatatcactcg |
33258317 |
T |
 |
| Q |
187 |
cgattcacacattagtgttctaattgaagtgaaatgtgaaacggactttatcggtagaagtgagaaattcaaggagtttgttcatgatcttgcaatgcaa |
286 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||||||| |||||| | || |||||||||||||| |||||||| ||| | ||||||||||||||| |
|
|
| T |
33258316 |
cgattcacacattggtgttctaattgaagtgaacggtgaaaccgactttgttggcagaagtgagaaatttaaggagttggttgacgatcttgcaatgcaa |
33258217 |
T |
 |
| Q |
287 |
gt |
288 |
Q |
| |
|
|| |
|
|
| T |
33258216 |
gt |
33258215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 298
Target Start/End: Complemental strand, 33269740 - 33269551
Alignment:
| Q |
113 |
aaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacata----cattcacgattcacacattagtgttcta |
208 |
Q |
| |
|
||||||||||||||||||||||| ||||| || | ||||| || ||||||| |||||||| |||||| ||||||| || || ||| |||||||| |
|
|
| T |
33269740 |
aaaaagggtctctcatccgctgataagaagtctgcaagactagcagctgaagaaagaatcggtacatatatacattcacaatgcatgcatcggtgttcta |
33269641 |
T |
 |
| Q |
209 |
attgaagtgaaatgtgaaacggactttatcggtagaagtgagaaattcaaggagtttgttcatgatcttgcaatgcaagttgctgcttgt |
298 |
Q |
| |
|
||||||||||| |||||||| |||||| | || |||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
33269640 |
attgaagtgaactgtgaaaccgactttgttggcagaagtgagaaattcaagaagttggttgatgatcttgcaatgcaagttgctgcttgt |
33269551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 86 - 258
Target Start/End: Complemental strand, 33279139 - 33278972
Alignment:
| Q |
86 |
catgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattc |
185 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||||||| ||| ||||||||||||||||| | || | || |||||||||| | ||||||||||| |
|
|
| T |
33279139 |
catgaaaaggcgcaagcataccttagaaaaa-gggtctcttatcagctgacaagaaatccggca----agctactaaaggaagaattggtacatacattc |
33279045 |
T |
 |
| Q |
186 |
acgattcacacattagtgttctaattgaagtgaaatgtgaaacggactttatcggtagaagtgagaaattcaa |
258 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || |||||||| |||||| || |||||| |||||||||| |
|
|
| T |
33279044 |
acgattcacacatcagtgttctaattgaagttaactgtgaaaccgactttgatggcagaagttagaaattcaa |
33278972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 88 - 286
Target Start/End: Complemental strand, 33395274 - 33395074
Alignment:
| Q |
88 |
tgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattcac |
187 |
Q |
| |
|
||||||||| ||| ||||||| |||| ||||||||||||||| ||||||||||||||||| || | || |||||||||||||||| || ||||||| || |
|
|
| T |
33395274 |
tgaaaaggcccaatcataccttagaacaaagggtctctcatcagctgacaagaaatccggtaggctagcagctgaaggaagaatcggtaaatacattgac |
33395175 |
T |
 |
| Q |
188 |
gattcacacattagtgttctaattgaagtgaaatgtgaaacggactttatcgg--tagaagtgagaaattcaaggagtttgttcatgatcttgcaatgca |
285 |
Q |
| |
|
||| ||| ||| |||||| ||||||||||| |||||||| |||||| | || |||||||| | |||||||||||| ||| ||||||| ||||||| |
|
|
| T |
33395174 |
gatgcacgcatctatgttctgattgaagtgaactgtgaaaccgactttgttggcacagaagtgatagattcaaggagttggttgctgatctttcaatgca |
33395075 |
T |
 |
| Q |
286 |
a |
286 |
Q |
| |
|
| |
|
|
| T |
33395074 |
a |
33395074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 192
Target Start/End: Complemental strand, 33293194 - 33293090
Alignment:
| Q |
88 |
tgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattcac |
187 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||||||| |||||| ||||||||| |||||| || |||||||||||||| | ||||||||||||| |
|
|
| T |
33293194 |
tgaaaaggtgaaagcatacctcagaaaaaagggtctctcattcgctgataagaaatccagaagactagcagctgaaggaagaattggtacatacattcac |
33293095 |
T |
 |
| Q |
188 |
gattc |
192 |
Q |
| |
|
||||| |
|
|
| T |
33293094 |
gattc |
33293090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 297
Target Start/End: Complemental strand, 33384156 - 33384040
Alignment:
| Q |
181 |
cattcacgattcacacattagtgttctaattgaagtgaaatgtgaaacggactttatcggtagaagtgagaaattcaaggagtttgttcatgatcttgca |
280 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||||| ||| |||| |||||| |||| |||||||||||| | |||||||| ||| ||||||||||| |
|
|
| T |
33384156 |
cattcactattcacacatcggtgttctaattgaagtgaactgtcaaaccgactttgtcggcagaagtgagaaaattaaggagttggttgatgatcttgca |
33384057 |
T |
 |
| Q |
281 |
atgcaagttgctgcttg |
297 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
33384056 |
atgcaagtggctgcttg |
33384040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 255
Target Start/End: Complemental strand, 33280482 - 33280358
Alignment:
| Q |
131 |
gctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattcacgattcacacattagtgttctaattgaagtgaaatgtgaaacgg |
230 |
Q |
| |
|
||||||||||||||||||||| | ||||||||| ||||| ||| |||||||||||||||| |||| || ||||| ||||||| || ||||| || | |
|
|
| T |
33280482 |
gctgacaagaaatccggaagattaaaagctgaaggaggaatcagtacctacattcacgattcacgcattggttttctatttgaagttaactgtgatactg |
33280383 |
T |
 |
| Q |
231 |
actttatcggtagaagtgagaaatt |
255 |
Q |
| |
|
||||| | || |||||||||||||| |
|
|
| T |
33280382 |
acttttttggcagaagtgagaaatt |
33280358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 33259668 - 33259583
Alignment:
| Q |
1 |
tctttgaattcttacataaggtttgtaatttttaaatgtctattctgtc-ccctttgaattgcagcaactatatcaccaacacttg |
85 |
Q |
| |
|
|||||||||||||||||||| ||| || || |||||||||| ||| | | ||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
33259668 |
tctttgaattcttacataagatttatagttgttaaatgtctgttccgccgccctttggattgcagcaactatatcaccagcacttg |
33259583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 33385399 - 33385314
Alignment:
| Q |
1 |
tctttgaattcttacataaggtttgtaatttttaaatgtctattctgtc-ccctttgaattgcagcaactatatcaccaacacttg |
85 |
Q |
| |
|
|||||||||||||||||||| ||| |||| |||||||||| ||| | | ||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
33385399 |
tctttgaattcttacataagatttctaatcgttaaatgtctgttccgccgccctttggattgcagcaactatatcaccagcacttg |
33385314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 24632076 - 24632161
Alignment:
| Q |
1 |
tctttgaattcttacataaggtttgtaatttttaaatgtctattctg-tcccctttgaattgcagcaactatatcaccaacacttg |
85 |
Q |
| |
|
||||||||||| |||||||| ||| ||||| |||||||||| ||||| ||| |||| |||||||||||| |||||||| |||||| |
|
|
| T |
24632076 |
tctttgaattcctacataagatttctaattgttaaatgtctgttctgctcctgtttggattgcagcaactttatcaccagcacttg |
24632161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 33293078 - 33293034
Alignment:
| Q |
251 |
aaattcaaggagtttgttcatgatcttgcaatgcaagttgctgct |
295 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
33293078 |
aaattcaaggagttggttaatgatcttgcaatgcaagttgctgct |
33293034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 28873045 - 28873091
Alignment:
| Q |
88 |
tgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctg |
134 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||||| |||| |
|
|
| T |
28873045 |
tgaaaaggcgtaagcatacctcagataaaagggtctctcatctgctg |
28873091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 33416237 - 33416152
Alignment:
| Q |
1 |
tctttgaattcttacataaggtttgtaatttttaaatgtctattctgtc-ccctttgaattgcagcaactatatcaccaacacttg |
85 |
Q |
| |
|
|||||||||| ||| |||| || ||||| |||||||||| ||| | | ||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
33416237 |
tctttgaatttttagttaagacttctaattgttaaatgtctgttccgccgccctttggattgcagcaactatatcaccagcacttg |
33416152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 33282277 - 33282241
Alignment:
| Q |
4 |
ttgaattcttacataaggtttgtaatttttaaatgtc |
40 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
33282277 |
ttgaattcttacataagatttctaatttttaaatgtc |
33282241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 33398078 - 33398042
Alignment:
| Q |
4 |
ttgaattcttacataaggtttgtaatttttaaatgtc |
40 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
33398078 |
ttgaattcttacataagatttataatttttaaatgtc |
33398042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 33408988 - 33408952
Alignment:
| Q |
4 |
ttgaattcttacataaggtttgtaatttttaaatgtc |
40 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
33408988 |
ttgaattcttacataagatttataatttttaaatgtc |
33408952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 88 - 296
Target Start/End: Original strand, 17447760 - 17447969
Alignment:
| Q |
88 |
tgaaaaggcgcaagcatacctcagaaaaaaggg-tctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattca |
186 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||| |
|
|
| T |
17447760 |
tgaaaaggcgcaagcatacctcagaaaaaaggggtctctcatccgctgataagaaatccggaagactggcagctgaaggaagaatcggtacatacattca |
17447859 |
T |
 |
| Q |
187 |
cgattcacacattagtgttctaattgaagtgaaatgtgaaacggactttatcggtagaagtgagaaattcaaggagtttgttcatgatcttgcaatgcaa |
286 |
Q |
| |
|
|||| ||| ||| ||| |||||||||| |||| | |||||| |||||| | || ||||| |||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
17447860 |
cgatgcacgcatcggtggtctaattgaattgaactttgaaaccgactttgttggcagaagggagagattcaaggagttggttgatgatcttgcaatgcaa |
17447959 |
T |
 |
| Q |
287 |
gttgctgctt |
296 |
Q |
| |
|
|| ||||||| |
|
|
| T |
17447960 |
gtggctgctt |
17447969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428 (Bit Score: 94; Significance: 7e-46; HSPs: 5)
Name: scaffold0428
Description:
Target: scaffold0428; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 88 - 288
Target Start/End: Complemental strand, 2537 - 2336
Alignment:
| Q |
88 |
tgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacata-cattca |
186 |
Q |
| |
|
||||||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||| || | ||||||||||||| |||||| || || |
|
|
| T |
2537 |
tgaaaagccgcaagcatatctcatcaaaaagggtctctcatccgctgataagaaatccgggagactagcagaagaaggaagaatcggtacatatcactcg |
2438 |
T |
 |
| Q |
187 |
cgattcacacattagtgttctaattgaagtgaaatgtgaaacggactttatcggtagaagtgagaaattcaaggagtttgttcatgatcttgcaatgcaa |
286 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||||||| |||||| | || |||||||||||||| |||||||| ||| | ||||||||||||||| |
|
|
| T |
2437 |
cgattcacacattggtgttctaattgaagtgaacggtgaaaccgactttgttggcagaagtgagaaatttaaggagttggttgacgatcttgcaatgcaa |
2338 |
T |
 |
| Q |
287 |
gt |
288 |
Q |
| |
|
|| |
|
|
| T |
2337 |
gt |
2336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 86 - 258
Target Start/End: Original strand, 15114 - 15281
Alignment:
| Q |
86 |
catgaaaaggcgcaagcatacctcagaaaaaagggtctctcatccgctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattc |
185 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||||||| ||| ||||||||||||||||| | || | || |||||||||| | ||||||||||| |
|
|
| T |
15114 |
catgaaaaggcgcaagcataccttagaaaaa-gggtctcttatcagctgacaagaaatccggca----agctactaaaggaagaattggtacatacattc |
15208 |
T |
 |
| Q |
186 |
acgattcacacattagtgttctaattgaagtgaaatgtgaaacggactttatcggtagaagtgagaaattcaa |
258 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || |||||||| |||||| || |||||| |||||||||| |
|
|
| T |
15209 |
acgattcacacatcagtgttctaattgaagttaactgtgaaaccgactttgatggcagaagttagaaattcaa |
15281 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 255
Target Start/End: Original strand, 13771 - 13895
Alignment:
| Q |
131 |
gctgacaagaaatccggaagacgagttgctgaaggaagaatcgctacatacattcacgattcacacattagtgttctaattgaagtgaaatgtgaaacgg |
230 |
Q |
| |
|
||||||||||||||||||||| | ||||||||| ||||| ||| |||||||||||||||| |||| || ||||| ||||||| || ||||| || | |
|
|
| T |
13771 |
gctgacaagaaatccggaagattaaaagctgaaggaggaatcagtacctacattcacgattcacgcattggttttctatttgaagttaactgtgatactg |
13870 |
T |
 |
| Q |
231 |
actttatcggtagaagtgagaaatt |
255 |
Q |
| |
|
||||| | || |||||||||||||| |
|
|
| T |
13871 |
acttttttggcagaagtgagaaatt |
13895 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3789 - 3704
Alignment:
| Q |
1 |
tctttgaattcttacataaggtttgtaatttttaaatgtctattctgtc-ccctttgaattgcagcaactatatcaccaacacttg |
85 |
Q |
| |
|
|||||||||||||||||||| ||| || || |||||||||| ||| | | ||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
3789 |
tctttgaattcttacataagatttatagttgttaaatgtctgttccgccgccctttggattgcagcaactatatcaccagcacttg |
3704 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 11975 - 12011
Alignment:
| Q |
4 |
ttgaattcttacataaggtttgtaatttttaaatgtc |
40 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
11975 |
ttgaattcttacataagatttctaatttttaaatgtc |
12011 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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