View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6867A_low_268 (Length: 250)
Name: NF6867A_low_268
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6867A_low_268 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 38 - 245
Target Start/End: Original strand, 31425360 - 31425567
Alignment:
| Q |
38 |
tttattgcacgttaatgtcgcattctttcatagttaatgatgttgataccatatcgtctgatacttaatcaacaataatttgtggttgggttttggttcc |
137 |
Q |
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| T |
31425360 |
tttattgcacgttaatgtcgcattctttcatagttaatgatgttgataccatatcgtctgatacttaatcaacaataatttgtggttgggttttggttcc |
31425459 |
T |
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| Q |
138 |
aatttatttatttttgtgacaaactaacaatttagttttttctcatgaagtacgtaatattattttcgtggttttctaaagtaaccttttgatttttaag |
237 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31425460 |
aatttatttatttttgcgacaaactaacaatttagttttttctcatgaagtacctaatattattttcgtggttttctaaagtaaccttttgatttttaag |
31425559 |
T |
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| Q |
238 |
cgtaaaga |
245 |
Q |
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| T |
31425560 |
cgaaaaga |
31425567 |
T |
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