View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6867A_low_298 (Length: 246)
Name: NF6867A_low_298
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6867A_low_298 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 12 - 246
Target Start/End: Original strand, 43669522 - 43669756
Alignment:
| Q |
12 |
tgaaagtggcttacaaagacttggttcaaattggtggtttactcattgatgtatacgtgactgttccattaagaaatttaaatggattgatcttaatcgg |
111 |
Q |
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| T |
43669522 |
tgaaagtggcttacaaagacttggttcaaattggtggtttactcattgatgtatatgtgactgttccattaagaaatttaaatggattgatcttaatcgg |
43669621 |
T |
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| Q |
112 |
atacccttaaatgtaccgaccatgttttgcatccaattcattcagatcccaagttgtcttgcnnnnnnnnnnnnncacattataatgattgcatatttat |
211 |
Q |
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| T |
43669622 |
atacccttaaatgtaccgaccatgttttgcatccaattcattcagatcccaagttgtcttgcaaaaatgaaaaaacacattataatgattgcatatttat |
43669721 |
T |
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| Q |
212 |
ggttaagcattgcatgatgatttagtactatcata |
246 |
Q |
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| T |
43669722 |
ggttaagcattgcatgatgatttagtactatcata |
43669756 |
T |
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