View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6867A_low_323 (Length: 243)
Name: NF6867A_low_323
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6867A_low_323 |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 21 - 227
Target Start/End: Original strand, 35558972 - 35559178
Alignment:
| Q |
21 |
aaaagttctattcaaaaacatagcttcacctaaaccacacaaaaaactccacataaaatgattcatacccttacaataatcaccacctcgcgaataatac |
120 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35558972 |
aaaagttctattcaaaaacatagcttcacctaaaccacacaaaaaactccacataaaatgattcatacccttacaataatcaccacctcgcgaataatac |
35559071 |
T |
|
| Q |
121 |
aaatacttcccattcctgaaattagtctccgatcccaaactcggtatcgtgtcattaatctcgtcatcacgattcgttacacgaggcaaggttttcccct |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
35559072 |
aaatacttcccattcctgaaattagtctccgatcccaaactcggtatcgtgtcattaatctcgtcatcacgattcgttacccgaggcaaggttttcccct |
35559171 |
T |
|
| Q |
221 |
taccacc |
227 |
Q |
| |
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||||||| |
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|
| T |
35559172 |
taccacc |
35559178 |
T |
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