View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6867A_low_338 (Length: 241)
Name: NF6867A_low_338
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6867A_low_338 |
 | |
|
| [»] chr4 (5 HSPs) |
| |
|
| [»] chr1 (7 HSPs) |
| |
|
| [»] scaffold0703 (1 HSPs) |
| | |
|
| [»] scaffold0010 (1 HSPs) |
| | |
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Alignment Details
Target: chr4 (Bit Score: 178; Significance: 4e-96; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 54422869 - 54423083
Alignment:
| Q |
19 |
caagacttttatgtagagtgagttttccccaccacatcccgttaataccgcgtctaccatttttctttgaaccccagtaaaatgaattcatcatcctttc |
118 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
54422869 |
caagacttttatgtaaagtgagttttccccac--------gttaataccgcgtctaccatttttctttgaaccccagtaaaatgaattcatcatcctgtc |
54422960 |
T |
|
| Q |
119 |
catttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttgtgccacggatttgatcaaaacttcttttcctgcacgt |
218 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
54422961 |
catttcttcacataaagaagtcggaatgaggaaagcacccatacaataagagggtatagcttgtgccacggatttgatcaagacttcttttcctgcacgt |
54423060 |
T |
|
| Q |
219 |
gatagggagcgagcactccaaga |
241 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
54423061 |
gatagggagcgagcactccaaga |
54423083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 214
Target Start/End: Original strand, 1503707 - 1503846
Alignment:
| Q |
75 |
ccatttttctttgaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggta |
174 |
Q |
| |
|
||||||||||||||||| ||||||| || |||| ||||||||| |||||||| | ||||| || |||| || ||| ||| ||| |||||||| || | |
|
|
| T |
1503707 |
ccatttttctttgaacctgagtaaaaagagttcagcatcctttcaatttcttctccaaaagaggtaggaagaagaaaatcactcatgcaataagaaggaa |
1503806 |
T |
|
| Q |
175 |
tagcttgtgccacggatttgatcaaaacttcttttcctgc |
214 |
Q |
| |
|
|| |||| || || |||||||| ||||| ||||| ||||| |
|
|
| T |
1503807 |
taacttgggcaactgatttgattaaaacctctttacctgc |
1503846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 226
Target Start/End: Complemental strand, 29016711 - 29016581
Alignment:
| Q |
96 |
taaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttgtgccacggatttga |
195 |
Q |
| |
|
|||||||| |||||||| | ||| || || ||||||||||| | ||| || || ||||||||||||||||| || || |||||||| || || ||||| | |
|
|
| T |
29016711 |
taaaatgagttcatcattcattctatctcatcacataaagaggatgggataagaaaagcacccatacaatatgaaggaatagcttgcgcaaccgatttaa |
29016612 |
T |
|
| Q |
196 |
tcaaaacttcttttcctgcacgtgataggga |
226 |
Q |
| |
|
| | ||| ||||| |||||||| || ||||| |
|
|
| T |
29016611 |
taagaacctctttacctgcacgagaaaggga |
29016581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 23601649 - 23601701
Alignment:
| Q |
129 |
cataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttg |
181 |
Q |
| |
|
||||||||||| |||||||| || ||||||||||||||||| || |||||||| |
|
|
| T |
23601649 |
cataaagaagtaggaatgagaaaggcacccatacaataagaagggatagcttg |
23601701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 112
Target Start/End: Complemental strand, 1362024 - 1361986
Alignment:
| Q |
74 |
accatttttctttgaaccccagtaaaatgaattcatcat |
112 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
1362024 |
accattcttctttgaaccccaataaaatgaattcatcat |
1361986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 20128256 - 20128034
Alignment:
| Q |
19 |
caagacttttatgtagagtgagttttccccaccacatcccgttaataccgcgtctaccatttttctttgaaccccagtaaaatgaattcatcatcctttc |
118 |
Q |
| |
|
|||||||||||||||||||||||||| |||| | ||||| ||||||||| || || ||||||||||| |||||||||||||| || |||||| | ||||| |
|
|
| T |
20128256 |
caagacttttatgtagagtgagtttttcccatcgcatccagttaataccacgcctgccatttttcttagaaccccagtaaaaagagttcatccttctttc |
20128157 |
T |
|
| Q |
119 |
catttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttgtgccacggatttgatcaaaacttcttttcctgcacgt |
218 |
Q |
| |
|
|||||| |||||||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
20128156 |
catttcctcacataatgaagcaggaaagaggaaagcacccatacagtaagagggtatagcttgtgccacggatttgatcaagacttcttttcctgcacgg |
20128057 |
T |
|
| Q |
219 |
gatagggagcgagcactccaaga |
241 |
Q |
| |
|
||||| || |||||||||||||| |
|
|
| T |
20128056 |
gatagagatcgagcactccaaga |
20128034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 44138269 - 44138180
Alignment:
| Q |
147 |
aggaaagcacccatacaataagagggtatagcttgtgccacggatttgatcaaaacttcttttcctgcacgtgatagggagcgagcactc |
236 |
Q |
| |
|
||||| ||||||||||||||||| ||||| ||||| | || ||||||||||| |||||||| || ||||||||||| || ||||||||| |
|
|
| T |
44138269 |
aggaaggcacccatacaataagaaggtatggcttgggaaactgatttgatcaagacttctttaccggcacgtgatagagatcgagcactc |
44138180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 27644871 - 27645038
Alignment:
| Q |
74 |
accatttttctttgaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggt |
173 |
Q |
| |
|
|||||| || || |||||||| |||||||||||||| || || || ||||| |||| | ||||| || | ||||| |||||||||||||||||||| |
|
|
| T |
27644871 |
accattctttttagaaccccaataaaatgaattcattattctctcaatttccgcacaaagtgaagtagggagaaggaaggcacccatacaataagaggga |
27644970 |
T |
|
| Q |
174 |
atagcttgtgccacggatttgatcaaaacttcttttcctgcacgtgatagggagcgagcactccaaga |
241 |
Q |
| |
|
||||| || || ||||||||||||| ||| || || ||||| || || || |||||||||||||| |
|
|
| T |
27644971 |
atagcctgagcagtagatttgatcaaaatttccttaccagcacgggaaagtgaccgagcactccaaga |
27645038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 50181390 - 50181263
Alignment:
| Q |
87 |
gaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttgtgcca |
186 |
Q |
| |
|
|||||||| || ||||| |||||||| ||||| || || ||||| | ||| || ||||||||||| || |||||||||||||| || || | ||| |||| |
|
|
| T |
50181390 |
gaaccccaatagaatgagttcatcattctttcaatctcatcacagagagacgtaggaatgaggaaggctcccatacaataagatggaatggtttgggcca |
50181291 |
T |
|
| Q |
187 |
cggatttgatcaaaacttcttttcctgc |
214 |
Q |
| |
|
| || ||||| |||| ||||||||||| |
|
|
| T |
50181290 |
ctgacttgataaaaatctcttttcctgc |
50181263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 4049979 - 4050034
Alignment:
| Q |
75 |
ccatttttctttgaaccccagtaaaatgaattcatcatcctttccatttcttcaca |
130 |
Q |
| |
|
|||||||| || || ||||||||||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
4049979 |
ccattttttttggagccccagtaaaaggaattcatcattctttcgatttcttcaca |
4050034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 12460310 - 12460401
Alignment:
| Q |
87 |
gaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagc |
178 |
Q |
| |
|
|||||||||||||| || |||||||||||||| | ||| ||||| |||||| ||||| || || || |||||||||||||| || ||||| |
|
|
| T |
12460310 |
gaaccccagtaaaaagagttcatcatcctttctaattcctcacacaaagaaccaggaataagaaaggcccccatacaataagatggaatagc |
12460401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 27465381 - 27465299
Alignment:
| Q |
87 |
gaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataaga |
169 |
Q |
| |
|
|||||| | ||||| |||| |||||||| || ||||||||| |||| || || || |||||||| ||||||||||||||||| |
|
|
| T |
27465381 |
gaaccctaataaaaggaatacatcatccactcaatttcttcatataaggaggtagggatgaggaaggcacccatacaataaga |
27465299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 46598370 - 46598234
Alignment:
| Q |
69 |
cgtctaccatttttctttgaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataag |
168 |
Q |
| |
|
|||| ||||||||| || |||||||||||||||||||||||||||| || | ||||||||| | || | || ||||| || || |||||||| |||| |
|
|
| T |
46598370 |
cgtcgaccattttttttcgaaccccagtaaaatgaattcatcatccgctcaagttcttcacaaagcgatgcagggatgagaaaggctcccatacagtaag |
46598271 |
T |
|
| Q |
169 |
agggtatagcttgtgccacggatttgatcaaaacttc |
205 |
Q |
| |
|
| || || |||||||| |||||||| ||||||||||| |
|
|
| T |
46598270 |
aagggatggcttgtgcaacggattttatcaaaacttc |
46598234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 31801053 - 31800882
Alignment:
| Q |
69 |
cgtctaccatttttctttgaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataag |
168 |
Q |
| |
|
|||| ||||||||| || |||||||||||||||||||||||||||| || | ||||||||| | || | || ||||| || || |||||||| |||| |
|
|
| T |
31801053 |
cgtcgaccattttt-ttcgaaccccagtaaaatgaattcatcatccgctcaagttcttcacaaagcgatgcggggatgagaaaggctcccatacagtaag |
31800955 |
T |
|
| Q |
169 |
agggtatagcttgtgccacggatttgatcaaaacttcttttcctgcacgtgatagggagcgagcactccaaga |
241 |
Q |
| |
|
| || || ||||||| || |||| ||||||||||| || || ||||| ||||| || || ||||||||||| |
|
|
| T |
31800954 |
aagggatgacttgtgcaacaaattttatcaaaacttccttaccggcacgagatagtgatcgggcactccaaga |
31800882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 512412 - 512360
Alignment:
| Q |
78 |
tttttctttgaaccccagtaaaatgaattcatcatcctttccatttcttcaca |
130 |
Q |
| |
|
||||| || |||||||| ||||||||||||||||||| ||| | ||||||||| |
|
|
| T |
512412 |
ttttttttcgaaccccaataaaatgaattcatcatccgttcaagttcttcaca |
512360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 196
Target Start/End: Complemental strand, 21951015 - 21950903
Alignment:
| Q |
84 |
tttgaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttgtg |
183 |
Q |
| |
|
||||||||||||||||| |||||||| | ||||| ||||||||||||||||| || || ||||| ||||| ||||||||||||| || || ||||| | |
|
|
| T |
21951015 |
tttgaaccccagtaaaaagaattcatggttctttctatttcttcacataaagaggtggggatgagaaaagctgccatacaataagaaggaattgcttgag |
21950916 |
T |
|
| Q |
184 |
ccacggatttgat |
196 |
Q |
| |
|
| || |||||||| |
|
|
| T |
21950915 |
caacagatttgat |
21950903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 16861794 - 16861703
Alignment:
| Q |
87 |
gaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagc |
178 |
Q |
| |
|
|||||||||||||| || |||||||||||||| | ||| ||||| |||||| ||||| || || || |||||||||||||| || ||||| |
|
|
| T |
16861794 |
gaaccccagtaaaaagagttcatcatcctttctaattcctcacacaaagaaccaggaataagaaaggcccccatacaataagatggaatagc |
16861703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 35612158 - 35612049
Alignment:
| Q |
87 |
gaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttgtgcca |
186 |
Q |
| |
|
|||||||| || || |||||||| | ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| || || || ||||| || | |
|
|
| T |
35612158 |
gaaccccaatagaaagaattcatggttctttcaatttcttcacataaagaggttggaatgagaaaagctcccatacaatatgaaggaattgcttgagcaa |
35612059 |
T |
|
| Q |
187 |
cggatttgat |
196 |
Q |
| |
|
| |||||||| |
|
|
| T |
35612058 |
ccgatttgat |
35612049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 42199359 - 42199438
Alignment:
| Q |
87 |
gaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaata |
166 |
Q |
| |
|
|||||||||||||| |||||||| | ||||| ||||||||||||||||| || |||| || ||||| ||||||||||| |
|
|
| T |
42199359 |
gaaccccagtaaaaagaattcatggttctttcaatttcttcacataaagaggtgtgaataagaaaagctcccatacaata |
42199438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 29291459 - 29291350
Alignment:
| Q |
87 |
gaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttgtgcca |
186 |
Q |
| |
|
|||||||| || || |||||||| | ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| || || || ||||| || | |
|
|
| T |
29291459 |
gaaccccaatagaaagaattcatggttctttcaatttcttcacataaagaggttggaatgagaaaagctcccatacaatatgaaggaattgcttgagcaa |
29291360 |
T |
|
| Q |
187 |
cggatttgat |
196 |
Q |
| |
|
| |||||||| |
|
|
| T |
29291359 |
ccgatttgat |
29291350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 238
Target Start/End: Complemental strand, 7273515 - 7273424
Alignment:
| Q |
147 |
aggaaagcacccatacaataagagggtatagcttgtgccacggatttgatcaaaacttcttttcctgcacgtgatagggagcgagcactcca |
238 |
Q |
| |
|
||||| ||||||||||||||||| ||||| ||||| || || ||||| ||||| | ||| || || |||||||| || || ||||||||||| |
|
|
| T |
7273515 |
aggaaggcacccatacaataagaaggtatggcttgggcaactgatttaatcaagatttccttaccagcacgtgaaagagatcgagcactcca |
7273424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 42578300 - 42578412
Alignment:
| Q |
96 |
taaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttgtgccacggatttga |
195 |
Q |
| |
|
|||||||||||||| || ||||| | ||| |||||||| ||| | ||||||||||| || ||||| || ||||| || ||| |||| || || ||||| | |
|
|
| T |
42578300 |
taaaatgaattcatgattctttctagttcctcacataatgaactaggaatgaggaatgcccccatgcagtaagaagggataacttgagcaaccgatttaa |
42578399 |
T |
|
| Q |
196 |
tcaaaacttcttt |
208 |
Q |
| |
|
| | ||||||||| |
|
|
| T |
42578400 |
ttagaacttcttt |
42578412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 4018648 - 4018757
Alignment:
| Q |
87 |
gaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttgtgcca |
186 |
Q |
| |
|
|||||||| || || |||||||| | ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| || || || ||||| || | |
|
|
| T |
4018648 |
gaaccccaatagaaagaattcatggttctttcaatttcttcacataaagaggttggaatgagaaaagctcccatacaatatgaaggaattgcttgagcaa |
4018747 |
T |
|
| Q |
187 |
cggatttgat |
196 |
Q |
| |
|
| |||||||| |
|
|
| T |
4018748 |
ccgatttgat |
4018757 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 24465847 - 24465738
Alignment:
| Q |
87 |
gaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttgtgcca |
186 |
Q |
| |
|
|||||||| || || |||||||| | ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||| || || || ||||| || | |
|
|
| T |
24465847 |
gaaccccaatagaaagaattcatggttctttcaatttcttcacataaagaggttggaatgagaaaagctcccatacaatatgaaggaattgcttgagcaa |
24465748 |
T |
|
| Q |
187 |
cggatttgat |
196 |
Q |
| |
|
| |||||||| |
|
|
| T |
24465747 |
ccgatttgat |
24465738 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 196
Target Start/End: Original strand, 8072564 - 8072675
Alignment:
| Q |
84 |
tttgaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttgtg |
183 |
Q |
| |
|
||||||||||||||||| ||| |||| | ||||| ||| ||||||||||||| || || ||||| ||||| |||||||||||||| || || ||||| | |
|
|
| T |
8072564 |
tttgaaccccagtaaaaagaagtcatggttctttctatt-cttcacataaagaggtggggatgagaaaagctcccatacaataagaaggaattgcttgag |
8072662 |
T |
|
| Q |
184 |
ccacggatttgat |
196 |
Q |
| |
|
| || |||||||| |
|
|
| T |
8072663 |
caacagatttgat |
8072675 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 647086 - 646968
Alignment:
| Q |
87 |
gaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttgtgcca |
186 |
Q |
| |
|
|||||||| ||||| || | |||||||||||| | ||| ||||| ||||| | || |||||||| || ||||| |||||||| || || |||||||| | |
|
|
| T |
647086 |
gaaccccaataaaaagagtgcatcatcctttcaagttcgtcacacaaagacttaggtatgaggaatgcccccatgcaataagatggaatggcttgtgcga |
646987 |
T |
|
| Q |
187 |
cggatttgatcaaaacttc |
205 |
Q |
| |
|
| ||||||||||| ||||| |
|
|
| T |
646986 |
ccgatttgatcaagacttc |
646968 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 208
Target Start/End: Complemental strand, 6864279 - 6864147
Alignment:
| Q |
76 |
catttttctttgaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtat |
175 |
Q |
| |
|
||||||| ||||||| || ||| || ||||||||||||||||| || ||||| ||||| || || || | ||| ||| | ||||||||||| ||||| || |
|
|
| T |
6864279 |
catttttttttgaacaccggtagaaagaattcatcatcctttcaatctcttcgcataaggaggtggggaggagaaaatcccccatacaataggagggaat |
6864180 |
T |
|
| Q |
176 |
agcttgtgccacggatttgatcaaaacttcttt |
208 |
Q |
| |
|
|||||| | || ||||||||||| | |||||| |
|
|
| T |
6864179 |
agcttggacaactgatttgatcaagatttcttt |
6864147 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 51141682 - 51141821
Alignment:
| Q |
102 |
gaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttgtgccacggatttgatcaaaa |
201 |
Q |
| |
|
|||||||| |||||||| | ||| |||||||||||| | |||||||| || | | ||||||||||| || || ||||| || || ||||| ||||||| |
|
|
| T |
51141682 |
gaattcattatcctttctaattcctcacataaagaactaggaatgagaaagtccctcatacaataagttggaatggcttgggcaactgatttaatcaaaa |
51141781 |
T |
|
| Q |
202 |
cttcttttcctgcacgtgatagggagcgagcactccaaga |
241 |
Q |
| |
|
||||||| || || || ||||||| ||||| |||||||| |
|
|
| T |
51141782 |
cttctttcccggctcgagataggggacgagcgctccaaga |
51141821 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0703 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0703
Description:
Target: scaffold0703; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 1202 - 1293
Alignment:
| Q |
87 |
gaaccccagtaaaatgaattcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagc |
178 |
Q |
| |
|
|||||||||||||| || |||||||||||||| | ||| ||||| |||||| ||||| || || || |||||||||||||| || ||||| |
|
|
| T |
1202 |
gaaccccagtaaaaagagttcatcatcctttctaattcctcacacaaagaaccaggaataagaaaggcccccatacaataagatggaatagc |
1293 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 214
Target Start/End: Original strand, 238236 - 238345
Alignment:
| Q |
105 |
ttcatcatcctttccatttcttcacataaagaagttggaatgaggaaagcacccatacaataagagggtatagcttgtgccacggatttgatcaaaactt |
204 |
Q |
| |
|
||||||||||| || ||||||||||| | ||||| ||||| | || || ||||||||||||||||| ||||| ||||| | ||||| || | ||||| |
|
|
| T |
238236 |
ttcatcatcctctcgatttcttcacaaagggaagtaggaatcaaaaatgcccccatacaataagaggggatagcatgtgcaatagatttaataagaactt |
238335 |
T |
|
| Q |
205 |
cttttcctgc |
214 |
Q |
| |
|
|||| ||||| |
|
|
| T |
238336 |
ctttacctgc |
238345 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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