View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6867A_low_371 (Length: 232)
Name: NF6867A_low_371
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6867A_low_371 |
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Alignment Details
Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 216
Target Start/End: Complemental strand, 32164124 - 32163923
Alignment:
| Q |
15 |
atcatcaacccttcttcaaccatccctgaatggctgcaagccgctaatagagttgtgaagacaacttcattaggcacaagttcctctttcaacatatccc |
114 |
Q |
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| T |
32164124 |
atcattaacccttcttcaaccatccctgaatggctgcaagccgctaatagagttgtgaagacaacttcattaggcacaagttcctctttcaacatatccc |
32164025 |
T |
|
| Q |
115 |
taaagagagctagagatccaactccatcaccttgcatgccacacccaccaatcattgcagcccacgtcacagcattcttctctcccatcccatcaaacac |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32164024 |
taaagagagctagagatccaactccatcaccttgcatgccacacccaccaatcattgcagcccacgtcacagcattcttctctcccatcccatcaaacac |
32163925 |
T |
|
| Q |
215 |
ca |
216 |
Q |
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|| |
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| T |
32163924 |
ca |
32163923 |
T |
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