View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6867A_low_396 (Length: 230)
Name: NF6867A_low_396
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6867A_low_396 |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 13292860 - 13292638
Alignment:
| Q |
1 |
tgaagtccagacccattaagtaaattattcatatcataccagtgttgtttgttactatgtaataaagtcaatattaaatggatttaacttaatgtttaaa |
100 |
Q |
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| T |
13292860 |
tgaagtccagacccattaagtaaattattcatatcataccagtgttgtttgttactatgtaacaaagtcaaaattaaatggatttaacttaatgtttaaa |
13292761 |
T |
|
| Q |
101 |
acacaaacaatacgtcaacaatgcatgcatttggaacctcaaattggaagatatcatgattttgttgagagaaattaaacaatattcaatatatgcacat |
200 |
Q |
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| T |
13292760 |
acacaaacaatacgtaaacaatgcatacatttggaacctcaaattggaagatatcatgattttgttgagagaaattaaacaatattcaatacatgcacat |
13292661 |
T |
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| Q |
201 |
aactgacgaaaaagcagaagaaa |
223 |
Q |
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| T |
13292660 |
atctgacgaagaagcagaagaaa |
13292638 |
T |
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