View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6867A_low_434 (Length: 226)

Name: NF6867A_low_434
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6867A_low_434
NF6867A_low_434
[»] chr3 (50 HSPs)
chr3 (1-226)||(16626921-16627145)
chr3 (1-226)||(18530012-18530237)
chr3 (1-226)||(15893124-15893349)
chr3 (42-226)||(8295590-8295774)
chr3 (42-226)||(8301723-8301907)
chr3 (42-226)||(4797112-4797296)
chr3 (42-226)||(15741541-15741725)
chr3 (42-226)||(18050877-18051061)
chr3 (48-187)||(4721285-4721424)
chr3 (48-187)||(35880420-35880559)
chr3 (42-187)||(29149214-29149359)
chr3 (48-180)||(18330335-18330467)
chr3 (48-187)||(6191970-6192109)
chr3 (48-187)||(8211395-8211534)
chr3 (48-187)||(18277517-18277656)
chr3 (48-187)||(18292818-18292957)
chr3 (48-187)||(18308119-18308258)
chr3 (48-187)||(22871339-22871478)
chr3 (48-187)||(22886398-22886537)
chr3 (48-154)||(5466672-5466778)
chr3 (48-178)||(5596831-5596961)
chr3 (48-190)||(10395787-10395929)
chr3 (48-187)||(7072866-7073005)
chr3 (48-155)||(18224877-18224984)
chr3 (48-187)||(47023107-47023246)
chr3 (48-226)||(6542939-6543117)
chr3 (48-190)||(28116422-28116564)
chr3 (54-155)||(4347155-4347256)
chr3 (54-155)||(28020964-28021065)
chr3 (60-155)||(5013398-5013493)
chr3 (60-155)||(17985433-17985528)
chr3 (48-187)||(18242381-18242520)
chr3 (48-187)||(20577327-20577466)
chr3 (60-190)||(7996213-7996343)
chr3 (60-190)||(10642721-10642851)
chr3 (42-148)||(20065739-20065845)
chr3 (48-178)||(36997554-36997684)
chr3 (48-178)||(51781674-51781804)
chr3 (48-187)||(11110826-11110965)
chr3 (48-187)||(21674347-21674486)
chr3 (48-154)||(4416603-4416709)
chr3 (48-178)||(24327822-24327952)
chr3 (48-154)||(28338989-28339095)
chr3 (48-154)||(31964938-31965044)
chr3 (48-154)||(50134536-50134642)
chr3 (48-151)||(5609787-5609890)
chr3 (48-178)||(51796762-51796893)
chr3 (48-124)||(29665450-29665526)
chr3 (48-187)||(48465569-48465708)
chr3 (1-77)||(22387993-22388069)
[»] chr2 (37 HSPs)
chr2 (1-226)||(19456784-19457009)
chr2 (1-226)||(21703527-21703752)
chr2 (1-226)||(27434810-27435035)
chr2 (57-213)||(27392656-27392812)
chr2 (42-226)||(23128973-23129157)
chr2 (42-226)||(28881864-28882048)
chr2 (42-226)||(20837568-20837752)
chr2 (42-226)||(12655192-12655376)
chr2 (54-187)||(37374850-37374983)
chr2 (48-187)||(261178-261317)
chr2 (48-155)||(12717018-12717125)
chr2 (48-187)||(13936957-13937096)
chr2 (48-187)||(34279138-34279277)
chr2 (48-154)||(21677595-21677701)
chr2 (48-187)||(12586490-12586629)
chr2 (48-155)||(31876002-31876109)
chr2 (48-187)||(34286043-34286182)
chr2 (48-187)||(34291103-34291242)
chr2 (48-155)||(34861401-34861508)
chr2 (48-155)||(37686322-37686429)
chr2 (48-155)||(37701587-37701694)
chr2 (48-187)||(37925182-37925321)
chr2 (48-155)||(39889783-39889890)
chr2 (48-187)||(9350407-9350546)
chr2 (60-155)||(16829763-16829858)
chr2 (60-155)||(16891623-16891718)
chr2 (48-187)||(27776896-27777035)
chr2 (48-187)||(27803381-27803520)
chr2 (48-187)||(27816663-27816802)
chr2 (48-187)||(40233188-40233327)
chr2 (48-178)||(19416912-19417042)
chr2 (48-154)||(22926441-22926547)
chr2 (48-148)||(11635602-11635702)
chr2 (48-148)||(11641791-11641891)
chr2 (60-148)||(32049526-32049614)
chr2 (75-187)||(39052268-39052380)
chr2 (1-52)||(31891691-31891742)
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-226)||(20066-20291)
scaffold0124 (42-226)||(30107-30291)
[»] chr4 (23 HSPs)
chr4 (1-226)||(15227542-15227767)
chr4 (1-226)||(15285302-15285527)
chr4 (1-226)||(1899929-1900154)
chr4 (1-213)||(14235902-14236114)
chr4 (42-226)||(14664687-14664871)
chr4 (62-213)||(15391771-15391922)
chr4 (42-226)||(17013669-17013853)
chr4 (48-226)||(24592735-24592913)
chr4 (48-187)||(14763728-14763867)
chr4 (48-187)||(36344936-36345075)
chr4 (48-187)||(6569561-6569700)
chr4 (48-187)||(14098249-14098388)
chr4 (48-187)||(19372969-19373108)
chr4 (48-155)||(31126942-31127049)
chr4 (60-155)||(27163753-27163848)
chr4 (48-155)||(30753482-30753589)
chr4 (48-187)||(54833098-54833237)
chr4 (48-178)||(18801046-18801176)
chr4 (48-178)||(33674234-33674364)
chr4 (48-226)||(40106062-40106240)
chr4 (60-148)||(5005617-5005705)
chr4 (60-155)||(21969441-21969536)
chr4 (48-187)||(39850331-39850470)
[»] chr7 (27 HSPs)
chr7 (1-226)||(16040981-16041206)
chr7 (1-226)||(16450258-16450483)
chr7 (1-226)||(16518679-16518904)
chr7 (1-226)||(16503643-16503868)
chr7 (42-226)||(2154228-2154412)
chr7 (42-187)||(10917169-10917314)
chr7 (49-187)||(11425087-11425225)
chr7 (48-187)||(5127686-5127825)
chr7 (48-190)||(45387034-45387176)
chr7 (48-187)||(31124605-31124744)
chr7 (48-187)||(5147650-5147789)
chr7 (48-187)||(9618345-9618484)
chr7 (48-187)||(24592851-24592990)
chr7 (48-155)||(26275404-26275511)
chr7 (48-154)||(4145433-4145539)
chr7 (48-153)||(26320179-26320284)
chr7 (48-155)||(3445020-3445127)
chr7 (48-187)||(16736770-16736909)
chr7 (48-187)||(16751824-16751963)
chr7 (48-187)||(17523226-17523365)
chr7 (48-187)||(17529850-17529989)
chr7 (48-178)||(11441263-11441393)
chr7 (48-155)||(26486054-26486161)
chr7 (48-187)||(26670224-26670363)
chr7 (48-155)||(31564709-31564816)
chr7 (48-187)||(26538183-26538322)
chr7 (54-124)||(26435014-26435084)
[»] chr1 (6 HSPs)
chr1 (1-226)||(20460761-20460986)
chr1 (1-226)||(16208402-16208627)
chr1 (48-187)||(10962362-10962501)
chr1 (42-155)||(41793726-41793839)
chr1 (48-187)||(51637910-51638049)
chr1 (48-178)||(28584682-28584812)
[»] chr5 (45 HSPs)
chr5 (1-226)||(23891869-23892094)
chr5 (1-226)||(25198695-25198920)
chr5 (44-226)||(24951773-24951955)
chr5 (42-226)||(24688472-24688656)
chr5 (42-226)||(30934299-30934483)
chr5 (42-226)||(23752765-23752949)
chr5 (42-187)||(11549056-11549201)
chr5 (42-187)||(23718303-23718448)
chr5 (42-187)||(22999429-22999574)
chr5 (48-187)||(33777189-33777328)
chr5 (48-187)||(15659081-15659220)
chr5 (48-226)||(40473873-40474051)
chr5 (42-187)||(2510753-2510898)
chr5 (48-187)||(9317153-9317292)
chr5 (48-187)||(6874004-6874143)
chr5 (48-155)||(12131889-12131996)
chr5 (48-155)||(24681171-24681278)
chr5 (48-155)||(24723698-24723805)
chr5 (48-155)||(37771320-37771427)
chr5 (48-154)||(8665796-8665902)
chr5 (48-190)||(15759178-15759320)
chr5 (1-75)||(22888287-22888361)
chr5 (48-226)||(37358976-37359154)
chr5 (54-187)||(9548870-9549003)
chr5 (54-178)||(41674420-41674544)
chr5 (48-187)||(5637612-5637751)
chr5 (60-155)||(18375745-18375840)
chr5 (48-187)||(18501069-18501208)
chr5 (48-187)||(26480094-26480233)
chr5 (60-155)||(30151752-30151847)
chr5 (60-187)||(30168171-30168298)
chr5 (48-187)||(31431130-31431269)
chr5 (48-155)||(31826740-31826847)
chr5 (48-155)||(37671813-37671920)
chr5 (48-187)||(37754670-37754809)
chr5 (42-187)||(34616223-34616368)
chr5 (48-187)||(3789228-3789367)
chr5 (60-155)||(33516090-33516185)
chr5 (42-155)||(32599784-32599897)
chr5 (48-187)||(13325165-13325304)
chr5 (48-187)||(43077951-43078090)
chr5 (60-178)||(28648937-28649055)
chr5 (49-155)||(28960120-28960226)
chr5 (48-178)||(29967387-29967517)
chr5 (48-178)||(30029126-30029256)
[»] chr8 (21 HSPs)
chr8 (1-226)||(16283103-16283328)
chr8 (42-226)||(19687752-19687936)
chr8 (45-213)||(22081252-22081420)
chr8 (42-226)||(16277208-16277392)
chr8 (42-226)||(14557281-14557465)
chr8 (42-187)||(2137636-2137781)
chr8 (42-226)||(27609282-27609466)
chr8 (48-187)||(18710279-18710418)
chr8 (48-190)||(19674128-19674270)
chr8 (48-178)||(31490133-31490263)
chr8 (42-154)||(31354250-31354362)
chr8 (48-155)||(19208743-19208850)
chr8 (48-187)||(19286158-19286297)
chr8 (60-187)||(28362350-28362477)
chr8 (48-226)||(3329902-3330080)
chr8 (48-226)||(29828967-29829145)
chr8 (48-187)||(19518526-19518665)
chr8 (48-178)||(33258425-33258555)
chr8 (48-226)||(12093116-12093294)
chr8 (1-52)||(19659372-19659423)
chr8 (1-52)||(44562932-44562983)
[»] scaffold0089 (3 HSPs)
scaffold0089 (16-226)||(29417-29627)
scaffold0089 (42-226)||(40487-40671)
scaffold0089 (42-226)||(47403-47587)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-213)||(21234-21446)
[»] chr6 (37 HSPs)
chr6 (42-220)||(24863374-24863552)
chr6 (42-226)||(13299312-13299496)
chr6 (42-226)||(22935238-22935422)
chr6 (42-226)||(23857683-23857867)
chr6 (47-226)||(20160358-20160534)
chr6 (47-226)||(22172297-22172473)
chr6 (42-226)||(15424678-15424862)
chr6 (42-226)||(26988652-26988836)
chr6 (42-226)||(26999724-26999908)
chr6 (42-187)||(24304979-24305124)
chr6 (48-187)||(26918070-26918209)
chr6 (54-187)||(16749544-16749677)
chr6 (48-187)||(29549168-29549307)
chr6 (42-187)||(27044080-27044225)
chr6 (1-81)||(22477593-22477673)
chr6 (48-187)||(3695753-3695892)
chr6 (48-155)||(4525011-4525118)
chr6 (48-155)||(4757483-4757590)
chr6 (48-187)||(4772687-4772826)
chr6 (48-187)||(27007402-27007541)
chr6 (48-187)||(27484807-27484946)
chr6 (48-155)||(29572735-29572842)
chr6 (42-187)||(17024952-17025097)
chr6 (48-187)||(29501096-29501235)
chr6 (60-155)||(30558395-30558490)
chr6 (48-187)||(34463728-34463867)
chr6 (48-178)||(16944394-16944524)
chr6 (54-154)||(26778000-26778100)
chr6 (48-155)||(27360377-27360484)
chr6 (48-155)||(27450720-27450827)
chr6 (48-226)||(4546151-4546329)
chr6 (48-226)||(28207093-28207271)
chr6 (48-187)||(16673817-16673956)
chr6 (48-226)||(4724510-4724688)
chr6 (54-155)||(26116792-26116893)
chr6 (45-226)||(27272947-27273128)
chr6 (49-226)||(27630077-27630254)
[»] scaffold0143 (1 HSPs)
scaffold0143 (42-226)||(26946-27130)
[»] scaffold0029 (1 HSPs)
scaffold0029 (48-226)||(554-732)
[»] scaffold0336 (1 HSPs)
scaffold0336 (48-187)||(7925-8064)
[»] scaffold0099 (1 HSPs)
scaffold0099 (44-226)||(48568-48757)
[»] scaffold0350 (1 HSPs)
scaffold0350 (48-155)||(7663-7770)
[»] scaffold0144 (1 HSPs)
scaffold0144 (48-187)||(26626-26765)
[»] scaffold0237 (1 HSPs)
scaffold0237 (60-155)||(15366-15461)
[»] scaffold0159 (1 HSPs)
scaffold0159 (48-151)||(9490-9593)
[»] scaffold0038 (1 HSPs)
scaffold0038 (48-226)||(7591-7769)
[»] scaffold0415 (1 HSPs)
scaffold0415 (48-187)||(5682-5821)
[»] scaffold0496 (1 HSPs)
scaffold0496 (48-88)||(157-197)


Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 16626921 - 16627145
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16626921 gatgctgagagtattgtgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 16627020  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16627021 ccctacttctgtttctt-cttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 16627119  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    |||||||||||||| |||||||||||    
T  16627120 atagcttcttctaggcgagtccccat 16627145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 18530237 - 18530012
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| |||||||||||||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||||  | |||||||||||||||    
T  18530237 gatgctgagagtattgcgcatacgggtacgatggaggtaactgggcagcattaataggggtaacagtagccatggattgactagttccggcagataccat 18530138  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  18530137 ccctacttctgtttctttcttcttatgatgaccgttaccgtatctctttgatgcatttacagaggattcaactttctcgaatacaataatgccttctctg 18530038  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    | ||||||||||||||||||||||||    
T  18530037 acagcttcttctagacgagtccccat 18530012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 15893124 - 15893349
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||  ||||||| ||||||||||||   |  ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||    
T  15893124 gatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattgataggagcaacagtagccatggattgaccggctccggcagacaccat 15893223  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    ||||||||| |||||||||||||| || || |||||||  |||||||||||||||||  | ||||||||| |||||||||| ||||| || |||||||||    
T  15893224 ccctacttccgtttctttcttcttgtggtgtccgttactatacctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttctctg 15893323  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    | ||||||||| |||||||| |||||    
T  15893324 acagcttcttccagacgagttcccat 15893349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 8295774 - 8295590
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  8295774 tgggctgcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 8295675  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || ||  |||  |||||||| |||||||| |||||    
T  8295674 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccttgacggcttcttccagacgagttcccat 8295590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 8301723 - 8301907
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||| || || || ||||| |    
T  8301723 tgggcagcattgataggagcaacaatagccatggattgaccggctccggcagacaccatccatacttccgtttctttcttcttgtggtgtccattaccat 8301822  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    |||||||||| |||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||    
T  8301823 acctctttgacgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccat 8301907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 4797112 - 4797296
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  4797112 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 4797211  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||    
T  4797212 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccat 4797296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 15741541 - 15741725
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || || || |    
T  15741541 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattgccat 15741640  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||    
T  15741641 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccat 15741725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 18051061 - 18050877
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  18051061 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 18050962  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||    
T  18050961 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccat 18050877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 4721424 - 4721285
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  4721424 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 4721325  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  4721324 tcgatgcattcacagaggattcagctttctcgaacacaat 4721285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 35880559 - 35880420
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  35880559 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 35880460  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  35880459 tcgatgcattcacagaggattcagctttctcgaacacaat 35880420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 29149214 - 29149359
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  29149214 tgggctgcattgataggagcaatagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 29149313  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    ||||||| ||||||||  | ||||||||| |||||||||| |||||    
T  29149314 acctcttcgatgcattcacagaggattcagctttctcgaacacaat 29149359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 18330467 - 18330335
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  18330467 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 18330368  T
Q  148 ttgatgcatttgcggaggattcaactttctcga 180  Q
    | ||||||||  | ||||||||| |||||||||    
T  18330367 tcgatgcattcacagaggattcagctttctcga 18330335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 6192109 - 6191970
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||||||||||||||||||  | || ||||||| |||||| |||||||||||||| || || || ||||| |||||||    
T  6192109 gcattgataggagcaacagtagccatggattgaccggctccaactgacaccatccatacttccgtttctttcttcttgtggtgtccattaccatacctct 6192010  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  6192009 tcgatgcattcacagaggattcagctttctcgaacacaat 6191970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 8211534 - 8211395
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  8211534 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 8211435  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| | || ||||| ||| ||||||| || |||||    
T  8211434 tcgatgcactcgcagaggactcagctttctcaaacacaat 8211395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 18277517 - 18277656
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  18277517 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 18277616  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  18277617 tcgatgcattcacagaggattcagctttctcgaacacaat 18277656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 18292818 - 18292957
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  18292818 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 18292917  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  18292918 tcgatgcattcacagaggattcagctttctcgaacacaat 18292957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 18308119 - 18308258
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  18308119 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 18308218  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  18308219 tcgatgcattcacagaggattcagctttctcgaacacaat 18308258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 22871339 - 22871478
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  22871339 gcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 22871438  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| | || ||||||||| ||||||| || |||||    
T  22871439 tcgatgcactcgcagaggattcagctttctcaaacacaat 22871478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 22886398 - 22886537
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  22886398 gcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 22886497  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| | || ||||||||| ||||||| || |||||    
T  22886498 tcgatgcactcgcagaggattcagctttctcaaacacaat 22886537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 5466778 - 5466672
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  5466778 gcattgataggtgcaacagtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 5466679  T
Q  148 ttgatgc 154  Q
    |||||||    
T  5466678 ttgatgc 5466672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 5596831 - 5596961
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  5596831 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 5596930  T
Q  148 ttgatgcatttgcggaggattcaactttctc 178  Q
    | |||||| | || |||||||||||||||||    
T  5596931 tcgatgcactcgcagaggattcaactttctc 5596961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 190
Target Start/End: Complemental strand, 10395929 - 10395787
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  10395929 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 10395830  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataat 190  Q
    | ||||||||  | ||||||||| ||||||| || ||||||||    
T  10395829 tcgatgcattcacagaggattcagctttctcaaacacaataat 10395787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 7073005 - 7072866
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||||||||||| |||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  7073005 gcattgataggagcaacagtagccatggattgactggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 7072906  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  7072905 tcgacgcattcacagaggattcagctttctcaaacacaat 7072866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 18224984 - 18224877
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  18224984 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 18224885  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  18224884 tcgatgca 18224877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 47023246 - 47023107
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  47023246 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 47023147  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||  ||||||| || |||||    
T  47023146 tcgatgcattcacagaggattcggctttctcaaacacaat 47023107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 6542939 - 6543117
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  6542939 gcattgataggtgcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 6543038  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||    
T  6543039 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccat 6543117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 190
Target Start/End: Original strand, 28116422 - 28116564
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  28116422 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 28116521  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataat 190  Q
    | |||||| | |  || |||||| ||||||| || ||||||||    
T  28116522 tcgatgcactcgtagaagattcagctttctcaaacacaataat 28116564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 4347155 - 4347256
Alignment:
Q  54 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 153  Q
    ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  4347155 ataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 4347254  T
Q  154 ca 155  Q
    ||    
T  4347255 ca 4347256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 28021065 - 28020964
Alignment:
Q  54 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 153  Q
    ||||| |||||||||||||||||||| |||||||| || || |||||||| ||||| ||||| |||||||| || || |||||||| |||||||||||||    
T  28021065 ataggagcaacagtagccatggattgcccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccgttaccatacctctttgatg 28020966  T
Q  154 ca 155  Q
    ||    
T  28020965 ca 28020964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 5013493 - 5013398
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 155  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || ||||||    
T  5013493 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgca 5013398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 17985433 - 17985528
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 155  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |||||||||    
T  17985433 gcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctttttgatgca 17985528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 18242520 - 18242381
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  18242520 gcattgataggagcaacggtagccattgattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 18242421  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  18242420 tcgacgcattcacagaggattcagctttctcaaacacaat 18242381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 20577327 - 20577466
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  20577327 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 20577426  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  20577427 tcgacgcattcacagaggattcagctttctcaaacacaat 20577466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 190
Target Start/End: Complemental strand, 7996343 - 7996213
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 159  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| || ||| | |    
T  7996343 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgaggcactcg 7996244  T
Q  160 cggaggattcaactttctcgaatacaataat 190  Q
    | || |||||| ||||||| || ||||||||    
T  7996243 cagaagattcagctttctcaaacacaataat 7996213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 190
Target Start/End: Complemental strand, 10642851 - 10642721
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 159  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| || ||| | |    
T  10642851 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgaggcactcg 10642752  T
Q  160 cggaggattcaactttctcgaatacaataat 190  Q
    | || |||||| ||||||| || ||||||||    
T  10642751 cagaagattcagctttctcaaacacaataat 10642721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 20065845 - 20065739
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| || ||||||||||| ||||| || ||||| |    
T  20065845 tgggctgcattgataggagcaacagtggccatggattgaccggctccagctgacaccatccccacttccgtatctttcttcttgtgatgtccattaccat 20065746  T
Q  142 acctctt 148  Q
    |||||||    
T  20065745 acctctt 20065739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 36997554 - 36997684
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  36997554 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 36997653  T
Q  148 ttgatgcatttgcggaggattcaactttctc 178  Q
    | || |||||| | ||||||||| |||||||    
T  36997654 tcgacgcatttacagaggattcagctttctc 36997684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 51781804 - 51781674
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  51781804 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 51781705  T
Q  148 ttgatgcatttgcggaggattcaactttctc 178  Q
    | || |||||| | ||||||||| |||||||    
T  51781704 tcgacgcatttacagaggattcagctttctc 51781674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 11110826 - 11110965
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| ||||| |||||||| || || || ||||| || ||||    
T  11110826 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccattaccatatctct 11110925  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  11110926 tcgacgcattcacagaggattcagctttctcaaacacaat 11110965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 21674486 - 21674347
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| || || |||||||||| |||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  21674486 gcattgataggagccacggtagccatgggttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 21674387  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  21674386 tcgatgcattcacagaggattcagctttctcaaacacaat 21674347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 4416709 - 4416603
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4416709 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 4416610  T
Q  148 ttgatgc 154  Q
    | |||||    
T  4416609 tcgatgc 4416603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 24327952 - 24327822
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  24327952 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 24327853  T
Q  148 ttgatgcatttgcggaggattcaactttctc 178  Q
    | || |||||  | ||||||||| |||||||    
T  24327852 tcgacgcattcacagaggattcagctttctc 24327822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 28339095 - 28338989
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  28339095 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 28338996  T
Q  148 ttgatgc 154  Q
    | |||||    
T  28338995 tcgatgc 28338989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 31964938 - 31965044
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  31964938 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 31965037  T
Q  148 ttgatgc 154  Q
    | |||||    
T  31965038 tcgatgc 31965044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 50134536 - 50134642
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  50134536 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 50134635  T
Q  148 ttgatgc 154  Q
    | |||||    
T  50134636 tcgatgc 50134642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 5609787 - 5609890
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  5609787 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 5609886  T
Q  148 ttga 151  Q
    ||||    
T  5609887 ttga 5609890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 51796893 - 51796762
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatg-accgttaccgtacctc 146  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || ||  || ||||| || |||    
T  51796893 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtgccattaccatatctc 51796794  T
Q  147 tttgatgcatttgcggaggattcaactttctc 178  Q
    || || |||||| | ||||||||| |||||||    
T  51796793 ttcgacgcatttacagaggattcagctttctc 51796762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 29665450 - 29665526
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttctt 124  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| ||||||||||||||    
T  29665450 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttctt 29665526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 48465708 - 48465569
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  48465708 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 48465609  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  48465608 tcgacgcattcacagaggattcagctttctcaaacacaat 48465569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22387993 - 22388069
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggat 77  Q
    |||||||| ||||| | ||||| ||||| |||||    ||||| |||||||| ||||| ||||||||||||||||||    
T  22387993 gatgctgagagtatggtgcataagggtaggacgggggaaactgagcagcattgataggagcaacagtagccatggat 22388069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 19456784 - 19457009
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19456784 gatgctgaaagtattgcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccagctccggcagataccat 19456883  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19456884 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 19456983  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    | |||||||||||| |||||||||||    
T  19456984 acagcttcttctaggcgagtccccat 19457009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 21703527 - 21703752
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||| ||||||| ||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21703527 gatgctgagagtatggcgcatatgggtacgacggaggtaactaggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 21703626  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  21703627 ccctacttctgtttctttcttcttatgatgaccgttaccgtatctctttgatgcatttacagaggattcaactttctcgaatacaataatgccttctctg 21703726  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    | ||||||||||||||||||||||||    
T  21703727 acagcttcttctagacgagtccccat 21703752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 27434810 - 27435035
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||  ||||||| ||||||||||||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  27434810 gatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacaccat 27434909  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    ||||||||| |||||||||||||| || || |||||||| |||||||||||||||||  | ||||||||| |||| ||||| ||||| || |||||||||    
T  27434910 ccctacttccgtttctttcttcttgtggtgtccgttaccatacctctttgatgcattcacagaggattcagctttttcgaacacaatgattccttctctg 27435009  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    |  |||||||| |||||||| |||||    
T  27435010 acggcttcttccagacgagttcccat 27435035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 27392812 - 27392656
Alignment:
Q  57 ggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcat 156  Q
    ||||||||||||||||  ||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| || |||||||||    
T  27392812 ggggcaacagtagccacagattgactggttccggcagataccatccctacttctgtctctttcttcttatgatgaccattaccatacttccttgatgcat 27392713  T
Q  157 ttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttcta 213  Q
    |||| ||||||||| ||||||| || ||||||||||| ||||||| ||| |||||||    
T  27392712 ttgcagaggattcacctttctcaaacacaataatgccgtctctgacagcctcttcta 27392656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 23128973 - 23129157
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || |||||||| |    
T  23128973 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccgttaccat 23129072  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||    
T  23129073 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccat 23129157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 28882048 - 28881864
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  28882048 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 28881949  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || |||| ||||||||| |||||||| |||||    
T  28881948 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacagcttcttccagacgagttcccat 28881864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 20837752 - 20837568
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||| | || ||||| |||||||| |||||||||||||| || || || ||||| |    
T  20837752 tgggctgcattgataggagcaacagtagccatggattgaccggctccgactgacaccattcctacttccgtttctttcttcttgtggtgtccattaccat 20837653  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | | ||||||| |||||||||| ||||| || ||||| ||||  ||||| || |||||||| |||||    
T  20837652 acctctttgatgcattcacagtggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagttcccat 20837568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 12655376 - 12655192
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||| | || ||||| |||||||| |||||||||||||| || || || ||||| |    
T  12655376 tgggctgcattgataggagcaacagtagccatggattgaccggctccgactgacaccattcctacttccgtttctttcttcttgtggtgtccattaccat 12655277  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | |||| |||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||    
T  12655276 acctctttgatgcattcacagagggttcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccat 12655192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 187
Target Start/End: Complemental strand, 37374983 - 37374850
Alignment:
Q  54 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 153  Q
    ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  37374983 ataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 37374884  T
Q  154 catttgcggaggattcaactttctcgaatacaat 187  Q
    ||||  | ||||||||| |||||||||| |||||    
T  37374883 cattcacagaggattcagctttctcgaacacaat 37374850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 261178 - 261317
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  261178 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 261277  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  261278 tcgatgcattcacagaggattcagctttctcaaacacaat 261317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 12717018 - 12717125
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  12717018 gcattgataggtgcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 12717117  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  12717118 tcgatgca 12717125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 13936957 - 13937096
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  13936957 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 13937056  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  13937057 tcgacgcattcacagaggattcagctttctcaaacacaat 13937096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 34279277 - 34279138
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  34279277 gcattgataggagcaacagtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 34279178  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || | |||  | ||||||||| ||||||| || |||||    
T  34279177 tcgacgtattcacagaggattcagctttctcaaacacaat 34279138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 21677595 - 21677701
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  21677595 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 21677694  T
Q  148 ttgatgc 154  Q
    | |||||    
T  21677695 tcgatgc 21677701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 12586629 - 12586490
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||| |||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  12586629 gcattgataggagcaacagtagtcatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 12586530  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  12586529 tcgacgcattcacagaggattcagctttctcaaacacaat 12586490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 31876109 - 31876002
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  31876109 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 31876010  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  31876009 tcgatgca 31876002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 34286182 - 34286043
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||| ||||||||||||||||||||  | || |||||||||||||| |||||||||||||| || || || ||||| || ||||    
T  34286182 gcattgataggagcaacagtggccatggattgaccggctccacctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatatctct 34286083  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  34286082 tcgatgcactcacagaggattcagctttctcaaacacaat 34286043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 34291242 - 34291103
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||| ||||||||||||||||||||  | || |||||||||||||| |||||||||||||| || || || ||||| || ||||    
T  34291242 gcattgataggagcaacagtggccatggattgaccggctccacctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatatctct 34291143  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  34291142 tcgatgcactcacagaggattcagctttctcaaacacaat 34291103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 34861508 - 34861401
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  34861508 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 34861409  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  34861408 tcgatgca 34861401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 37686322 - 37686429
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  37686322 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 37686421  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  37686422 tcgatgca 37686429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 37701587 - 37701694
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  37701587 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 37701686  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  37701687 tcgatgca 37701694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 37925321 - 37925182
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  37925321 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 37925222  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  37925221 tcgatgcactcacagaggattcagctttctcaaacacaat 37925182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 39889890 - 39889783
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  39889890 gcattgataggagcaacagtggccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 39889791  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  39889790 tcgatgca 39889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 9350407 - 9350546
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  9350407 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 9350506  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  9350507 tcgacgcattcacagaggattcagctttctcaaacacaat 9350546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 16829763 - 16829858
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 155  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  16829763 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 16829858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 16891718 - 16891623
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 155  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  16891718 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 16891623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 27777035 - 27776896
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27777035 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27776936  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  27776935 tcgacgcattcacagaggattcagctttctcaaacacaat 27776896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 27803520 - 27803381
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27803520 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27803421  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  27803420 tcgacgcattcacagaggattcagctttctcaaacacaat 27803381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 27816802 - 27816663
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27816802 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27816703  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  27816702 tcgacgcattcacagaggattcagctttctcaaacacaat 27816663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 40233327 - 40233188
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  40233327 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 40233228  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  40233227 tcgacgcattcacagaggattcagctttctcaaacacaat 40233188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 19416912 - 19417042
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  19416912 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 19417011  T
Q  148 ttgatgcatttgcggaggattcaactttctc 178  Q
    | || |||||  | ||||||||| |||||||    
T  19417012 tcgacgcattcacagaggattcagctttctc 19417042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 22926441 - 22926547
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  22926441 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 22926540  T
Q  148 ttgatgc 154  Q
    | |||||    
T  22926541 tcgatgc 22926547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 148
Target Start/End: Original strand, 11635602 - 11635702
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| | |||||||||||| || || || ||||| |||||||    
T  11635602 gcattgataggagcaacggtagccatggattgaccggctcctgctgacaccatccccacttccgcttctttcttcttgtggtgtccattaccatacctct 11635701  T
Q  148 t 148  Q
    |    
T  11635702 t 11635702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 148
Target Start/End: Original strand, 11641791 - 11641891
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| | |||||||||||| || || || ||||| |||||||    
T  11641791 gcattgataggagcaacggtagccatggattgaccggctcctgctgacaccatccccacttccgcttctttcttcttgtggtgtccattaccatacctct 11641890  T
Q  148 t 148  Q
    |    
T  11641891 t 11641891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 32049614 - 32049526
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 148  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||| ||||| || || || ||||| ||||||||    
T  32049614 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttcttttttcttgtggtgtccattaccatacctctt 32049526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 187
Target Start/End: Original strand, 39052268 - 39052380
Alignment:
Q  75 gattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactt 174  Q
    |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||| || |||||  | ||||||||| |||    
T  39052268 gattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcattcacagaggattcagctt 39052367  T
Q  175 tctcgaatacaat 187  Q
    |||| || |||||    
T  39052368 tctcaaacacaat 39052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31891691 - 31891742
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 52  Q
    |||||||| ||||||||||||||||||||||||||  || ||| ||||||||    
T  31891691 gatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 31891742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 194; Significance: 1e-105; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 20291 - 20066
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||| ||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20291 gatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 20192  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20191 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaacacaataatgccttctctg 20092  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    | |||||||||||| |||||||||||    
T  20091 acagcttcttctaggcgagtccccat 20066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 30291 - 30107
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  30291 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 30192  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||| | ||||||||  | ||||||||  |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||    
T  30191 acctcctcgatgcattcacagaggattcggctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccat 30107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 15227767 - 15227542
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15227767 gatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccagctccggcagataccat 15227668  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15227667 ccctacttctgtttctttcttcttatgatgaccgttaccatgcctctttgatgcatttgcggaggattcatctttctcgaatacaataatgccttctctg 15227568  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    | ||||||||||||||||||||||||    
T  15227567 acagcttcttctagacgagtccccat 15227542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 15285302 - 15285527
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||||||||||| |||||| | |||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15285302 gatgctgagagtattgcgcatatgggtacaatggaggtaactgggcagcattaataggggcaacagtagccatggattgaccagctccggcagataccat 15285401  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15285402 ccatacttctgtttctttcttcttatgatgaccgttaccgttcctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 15285501  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    | |||||||||||| |||||||||||    
T  15285502 acagcttcttctaggcgagtccccat 15285527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 1900154 - 1899929
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||| ||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1900154 gatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 1900055  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||    
T  1900054 ccctacttctgtttctttcttcttatgatgatcgttaccgtacctctttgatgcatttacagaggattcaactttctcaaatacaataatgccttctctg 1899955  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    | ||||||||| | ||||||||||||    
T  1899954 acagcttcttccaaacgagtccccat 1899929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 14235902 - 14236114
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||||||  |||| |||||| | ||  |||||| |||||||||||||||| |||||| ||||||||||||| || |||||||||||||||    
T  14235902 gatgctgagagtattgcatatactggtacggcagaggtaactgagcagcattaataggggtaacagtggccatggattgactggttccggcagataccat 14236001  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||||||||   |||| ||||||||  |||||||||| ||||||||| ||||||||    
T  14236002 ccctacttctgtctctttcttcttatgatgaccattaccgtacttctttgatgtgcttgcagaggattcccctttctcgaacacaataatgtcttctctg 14236101  T
Q  201 atagcttcttcta 213  Q
    | ||| |||||||    
T  14236102 acagcctcttcta 14236114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 14664871 - 14664687
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  14664871 tgggcagcattgataggagcaacagtagccatggattgaccagctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 14664772  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| || |  ||||| || |||||||| |||||    
T  14664771 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctaacggcttcctccagacgagttcccat 14664687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 15391771 - 15391922
Alignment:
Q  62 aacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcg 161  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||||||||||| || || ||| || |||||||||||||     
T  15391771 aacagtagccatggattgactggttccagcagataccatccctacttctgtctctttcttcttatgatgaccattgccatacttccttgatgcatttgca 15391870  T
Q  162 gaggattcaactttctcgaatacaataatgccttctctgatagcttcttcta 213  Q
    ||||||||| ||||| | || ||||||||||| ||||||| ||| |||||||    
T  15391871 gaggattcacctttcccaaacacaataatgccatctctgacagcctcttcta 15391922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 17013853 - 17013669
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| || || || ||||| |    
T  17013853 tgggctgcattgataggagcaacagtagccatggattgaccagctccggctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 17013754  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||    
T  17013753 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccat 17013669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 24592735 - 24592913
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |||||||    
T  24592735 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccatacctct 24592834  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| ||||| || |||||    
T  24592835 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgggttcccat 24592913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 14763728 - 14763867
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  14763728 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 14763827  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  14763828 tcgatgcattcacagaggattcagctttctcgaacacaat 14763867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 36344936 - 36345075
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  36344936 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 36345035  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  36345036 tcgatgcattcacagaggattcagctttctcgaacacaat 36345075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 6569700 - 6569561
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  6569700 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 6569601  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||||| || ||||||||| ||||||| || |||||    
T  6569600 tcgatgcattcgcagaggattcagctttctcaaacacaat 6569561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 14098388 - 14098249
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  14098388 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 14098289  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||| | ||||||||| ||||||| || |||||    
T  14098288 tcgacgcatttacagaggattcagctttctcaaacacaat 14098249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 19373108 - 19372969
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  19373108 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 19373009  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  19373008 tcgatgcattcacagaggattcagctttctcaaacacaat 19372969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 31126942 - 31127049
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  31126942 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 31127041  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  31127042 tcgatgca 31127049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 27163753 - 27163848
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 155  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || ||||||    
T  27163753 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgca 27163848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 30753589 - 30753482
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || | |||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  30753589 gcattgataggtgcaacagtagccatggattgaccggctccagctgacatcatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 30753490  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  30753489 tcgatgca 30753482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 54833237 - 54833098
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  54833237 gcattgataggagcaacagtggccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 54833138  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  54833137 tcgacgcactcgcagaagattcagctttctcaaacacaat 54833098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 18801046 - 18801176
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| | |||||||||||| || || |||||||| |||||||||||||||||||| || || || ||||| || ||||    
T  18801046 gcattgataggtgcaacagtagccatagcttgaccggctccagctgacaccatccccacttctgtttctttcttcttgtggtgtccattaccatatctct 18801145  T
Q  148 ttgatgcatttgcggaggattcaactttctc 178  Q
    | || |||||  | ||||||||| |||||||    
T  18801146 tcgacgcattcacagaggattcagctttctc 18801176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 33674234 - 33674364
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  33674234 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 33674333  T
Q  148 ttgatgcatttgcggaggattcaactttctc 178  Q
    | || |||||| | ||||||||| |||||||    
T  33674334 tcgacgcatttacagaggattcagctttctc 33674364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 40106062 - 40106240
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || |  ||||||||||| |    
T  40106062 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtctattaccgtaccttt 40106161  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| ||||||||    
T  40106162 tcgatgcactcgtagaagattcagctttctcaaacacaatgattccatccctgactgcttcctcaagacgggtccccat 40106240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 5005705 - 5005617
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 148  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| ||||||||    
T  5005705 gcaacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctctt 5005617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 21969536 - 21969441
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 155  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||| ||||| || || || ||||| |||||||| ||||||    
T  21969536 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttcttttttcttgtggtgtccattaccatacctcttcgatgca 21969441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 39850470 - 39850331
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  39850470 gcattgataggtgcaacagtagccattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 39850371  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || | |||  | ||||||||| ||||||| || |||||    
T  39850370 tcgacgtattcacagaggattcagctttctcaaacacaat 39850331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 16041206 - 16040981
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||| ||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16041206 gatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 16041107  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16041106 ccctacttctgtttctttcttcttatgatgaccgttaccatacctctttgatgcatttacggaggattcaactttctcgaatacaataatgccttctctg 16041007  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    | |||||||||||||||||| |||||    
T  16041006 acagcttcttctagacgagttcccat 16040981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 16450258 - 16450483
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| |||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16450258 gatgctgagagtactgcgcgtacgggtacgacggaggtaactgggcagcattaataggggcaacagtagctatggattgaccggctccggcagataccat 16450357  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  16450358 ccctacttttgtttctttcttcttatgatgaccgttaccgtatctttttgatgcatttacagaggattcaactttctcgaatacaataatgccttctctg 16450457  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    | ||||||||||||||||||||||||    
T  16450458 acagcttcttctagacgagtccccat 16450483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 16518679 - 16518904
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||  ||||||| ||||| ||||||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  16518679 gatgctgagagtacggcgcatatgggtatgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacaccat 16518778  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    ||||||||| |||||||||||||| || || |||||||| |||||||||||||||||| | ||||||||| |||| ||||| ||||| || |||||||||    
T  16518779 ccctacttccgtttctttcttcttgtggtgtccgttaccatacctctttgatgcatttacagaggattcagctttttcgaacacaatgattccttctctg 16518878  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    |  |||||||| |||||||| |||||    
T  16518879 acggcttcttccagacgagttcccat 16518904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 16503643 - 16503868
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||  ||||||| ||||| ||||||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  16503643 gatgctgagagtacggcgcatatgggtatgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacaccat 16503742  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    ||||||||| |||||||||||||| || || |||||||| |||||||||||||||||  | ||||||||| |||| ||||| ||||| || |||||||||    
T  16503743 ccctacttccgtttctttcttcttgtggtgtccgttaccatacctctttgatgcattcacagaggattcagctttttcgaacacaatgattccttctctg 16503842  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    |  |||||||| |||||||| |||||    
T  16503843 acggcttcttccagacgagttcccat 16503868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 2154412 - 2154228
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  2154412 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 2154313  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| ||  | || ||||  |||||||| |||||||| |||||    
T  2154312 acctctttgatgcattcacagaggattcagctttctcgaacacaatgatttcatccctgacggcttcttccagacgagttcccat 2154228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 10917169 - 10917314
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  10917169 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 10917268  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    ||||||||||||||||  | ||||||||| ||||||| || |||||    
T  10917269 acctctttgatgcattcacagaggattcagctttctcaaacacaat 10917314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 187
Target Start/End: Original strand, 11425087 - 11425225
Alignment:
Q  49 cattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 148  Q
    |||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| ||||||||    
T  11425087 cattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 11425186  T
Q  149 tgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
     ||||||||  | ||||||||| |||||||||| |||||    
T  11425187 cgatgcattcacagaggattcagctttctcgaacacaat 11425225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 5127825 - 5127686
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  5127825 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 5127726  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||| ||| |||||||||| |||||    
T  5127725 tcgatgcattcacagaggactcagctttctcgaacacaat 5127686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 190
Target Start/End: Complemental strand, 45387176 - 45387034
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  45387176 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 45387077  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataat 190  Q
    | || ||| |||| || |||||| ||||||| || ||||||||    
T  45387076 tcgacgcacttgcagaagattcagctttctcaaacacaataat 45387034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 31124744 - 31124605
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| || ||||    
T  31124744 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatatctct 31124645  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||||| || ||||||||| ||||||| || |||||    
T  31124644 tcgatgcattcgcagaggattcagctttctcaaacacaat 31124605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 5147650 - 5147789
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||  ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  5147650 gcattgataggagcaatggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 5147749  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||||| || || |||||| ||||||| || |||||    
T  5147750 tcgatgcattcgcagaagattcagctttctcaaacacaat 5147789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 9618484 - 9618345
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  9618484 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 9618385  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  9618384 tcgatgcactcacagaggattcagctttctcaaacacaat 9618345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 24592851 - 24592990
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  24592851 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 24592950  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||| | ||||||||| ||||||| || |||||    
T  24592951 tcgacgcatttacagaggattcagctttctcaaacacaat 24592990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 26275404 - 26275511
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  26275404 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 26275503  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  26275504 tcgatgca 26275511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 4145433 - 4145539
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4145433 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 4145532  T
Q  148 ttgatgc 154  Q
    | |||||    
T  4145533 tcgatgc 4145539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 26320179 - 26320284
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  26320179 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 26320278  T
Q  148 ttgatg 153  Q
    | ||||    
T  26320279 tcgatg 26320284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 3445127 - 3445020
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  3445127 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 3445028  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  3445027 tcgatgca 3445020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 16736770 - 16736909
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  16736770 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 16736869  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  16736870 tcgacgcactcgcagaagattcagctttctcaaacacaat 16736909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 16751824 - 16751963
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  16751824 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 16751923  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  16751924 tcgacgcactcgcagaagattcagctttctcaaacacaat 16751963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 17523365 - 17523226
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  17523365 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 17523266  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  17523265 tcgacgcactcgcagaagattcagctttctcaaacacaat 17523226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 17529850 - 17529989
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  17529850 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 17529949  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  17529950 tcgacgcactcgcagaagattcagctttctcaaacacaat 17529989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 11441393 - 11441263
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  11441393 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 11441294  T
Q  148 ttgatgcatttgcggaggattcaactttctc 178  Q
    | || |||||| | ||||||||| |||||||    
T  11441293 tcgacgcatttacagaggattcagctttctc 11441263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 26486054 - 26486161
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  26486054 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 26486153  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  26486154 tcgatgca 26486161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 26670224 - 26670363
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  26670224 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 26670323  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  26670324 tcgatgcactcacagaggattcagctttctcaaacacaat 26670363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 31564709 - 31564816
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  31564709 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 31564808  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  31564809 tcgatgca 31564816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 26538183 - 26538322
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  26538183 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 26538282  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  26538283 tcgacgcattcacagaggattcagctttctcaaacacaat 26538322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 26435084 - 26435014
Alignment:
Q  54 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttctt 124  Q
    ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| ||||||||||||||    
T  26435084 ataggagcaacagtggccatggactgaccggctcctgctgacaccatccccacttccgtttctttcttctt 26435014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 20460986 - 20460761
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20460986 gatgctgagagtattgcgcatacgggtacggcggaggtaactgggcagcattaataggggcaatagtagccatggattgaccggctccggcagataccat 20460887  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  20460886 ccctacttctatttctttcttcttatgatgaccgttaccgtacctctttgatgcattggcggaggattcaactttctcgaatataataatgccttctctg 20460787  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    | |||||||||||| |||||||||||    
T  20460786 acagcttcttctaggcgagtccccat 20460761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 16208402 - 16208627
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||||||   ||| | |||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16208402 gatgctgagagtattgcatgtactgatacggcggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 16208501  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||    
T  16208502 ctctacttctgtttctttcttcttatgatgaccgttaccgtaactctttgatgcatttacagaggattcaactttctcaaatacaataatgccttctctg 16208601  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    | ||||||||||||||||||||||||    
T  16208602 acagcttcttctagacgagtccccat 16208627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 10962501 - 10962362
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  10962501 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 10962402  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  10962401 tcgatgcattcacagaggattcagctttctcaaacacaat 10962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 41793726 - 41793839
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||||||||||| || || || ||||| |    
T  41793726 tgggctgcattgataggagcaacggtagccatggattgaccggctccagctgataccattcccacttccgtttctttcttcttgtggtgtccattaccat 41793825  T
Q  142 acctctttgatgca 155  Q
    ||||||||||||||    
T  41793826 acctctttgatgca 41793839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 51638049 - 51637910
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  51638049 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 51637950  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || ||| |||| || |||||| ||||||| || |||||    
T  51637949 tcgacgcacttgcagaagattcagctttctcaaacacaat 51637910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 28584812 - 28584682
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  28584812 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 28584713  T
Q  148 ttgatgcatttgcggaggattcaactttctc 178  Q
    | || |||||  | ||||||||| |||||||    
T  28584712 tcgacgcattcacagaggattcagctttctc 28584682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 8e-82; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 23892094 - 23891869
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||  ||||||| ||||||||||||   |  ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  23892094 gatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagcaacagtagccatggattgatcggctccggcagataccat 23891995  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  23891994 ccctacttctgtttctttcttcttatgatgtccgttaccatacctctttgatgcattcacggaggattcaactttctcgaatacaataattccttctctg 23891895  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    | ||||||||| ||||||||||||||    
T  23891894 acagcttcttccagacgagtccccat 23891869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 25198920 - 25198695
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||  ||||||| ||||||||||||   || |||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  25198920 gatgctgagagtacggcgcatatgggtacgacggaggcaattgggaagcattaataggagcaacagtagccatggattgaccggctccggcggataccat 25198821  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  25198820 ccctacttctgtttccttcttcttatgatgtccgttaccgtacctctttgatgcattcacggaggattcaactttctcgaatacaataattccttctctg 25198721  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    | ||||||||| ||| ||||||||||    
T  25198720 acagcttcttccagatgagtccccat 25198695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 44 - 226
Target Start/End: Complemental strand, 24951955 - 24951773
Alignment:
Q  44 ggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtac 143  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || |||||||| |||    
T  24951955 ggcagcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccatac 24951856  T
Q  144 ctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||  | ||||||||| |||||||||| ||||| || ||||||||||  |||||||| |||||||| |||||    
T  24951855 ctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttctctgacggcttcttccagacgagttcccat 24951773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 24688472 - 24688656
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  24688472 tgggctgcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 24688571  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||||||||  |||||||| |||||||| |||||    
T  24688572 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttctctgacggcttcttccagacgagttcccat 24688656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 30934483 - 30934299
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| |||||||||| ||||||||| |||||||||| ||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  30934483 tgggctgcattgataggagcaacagtagtcatggattggccggctccggtagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 30934384  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||    
T  30934383 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccat 30934299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 23752765 - 23752949
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  23752765 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 23752864  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||    
T  23752865 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccat 23752949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 11549201 - 11549056
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  11549201 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 11549102  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    ||||||| ||||||||  | ||||||||| |||||||||| |||||    
T  11549101 acctcttcgatgcattcacagaggattcagctttctcgaacacaat 11549056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 23718303 - 23718448
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  23718303 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 23718402  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    ||||||| ||||||||  | ||||||||| |||||||||| |||||    
T  23718403 acctcttcgatgcattcacagaggattcagctttctcgaacacaat 23718448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 22999429 - 22999574
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  22999429 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 22999528  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    ||||||| ||||||||  | ||||||||| |||||||||| |||||    
T  22999529 acctcttcgatgcattcacagaggattcagctttctcgaacacaat 22999574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 33777328 - 33777189
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||| ||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  33777328 gcattgataggagcaacagtagccatggattgaccagctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 33777229  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  33777228 tcgatgcattcacagaggattcagctttctcgaacacaat 33777189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 15659081 - 15659220
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  15659081 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 15659180  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  15659181 tcgatgcattcacagaggattcagctttctcgaacacaat 15659220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 40473873 - 40474051
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| |||||||||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||| ||||    
T  40473873 gcattgataggggcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtatctct 40473972  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || || ||||  |||||||| ||||| || |||||    
T  40473973 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcttcaagacgggttcccat 40474051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 2510898 - 2510753
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||||||||||| || || || ||||| |    
T  2510898 tgggctgcattgataggagcaacggtagccatggattgaccggctccagctgataccattcccacttccgtttctttcttcttgtggtgtccattaccat 2510799  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    |||||||||||||| |  | ||||||||| ||||||| || |||||    
T  2510798 acctctttgatgcactcacagaggattcagctttctcaaacacaat 2510753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 9317292 - 9317153
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  9317292 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 9317193  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    |||||||| |  | ||||||||| ||||||| || |||||    
T  9317192 ttgatgcactcacagaggattcagctttctcaaacacaat 9317153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 6874143 - 6874004
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  6874143 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 6874044  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    |||||||| |  | ||||||||| ||||||| || |||||    
T  6874043 ttgatgcactcacagaggattcagctttctcaaacacaat 6874004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 12131996 - 12131889
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  12131996 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 12131897  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  12131896 tcgatgca 12131889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 24681278 - 24681171
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  24681278 gcattgataggtgcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 24681179  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  24681178 tcgatgca 24681171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 24723805 - 24723698
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  24723805 gcattgataggtgcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 24723706  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  24723705 tcgatgca 24723698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 37771320 - 37771427
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  37771320 gcattgataggtgcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 37771419  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  37771420 tcgatgca 37771427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 8665796 - 8665902
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  8665796 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 8665895  T
Q  148 ttgatgc 154  Q
    | |||||    
T  8665896 tcgatgc 8665902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 190
Target Start/End: Original strand, 15759178 - 15759320
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||| ||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  15759178 gcattgataggagcaacagtagccattgattgacctgctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 15759277  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataat 190  Q
    | || ||| |||| || |||||| ||||||| || ||||||||    
T  15759278 tcgacgcacttgcagaagattcagctttctcaaacacaataat 15759320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22888361 - 22888287
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatgg 75  Q
    |||||||| ||||| ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  22888361 gatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgg 22888287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 37358976 - 37359154
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  37358976 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 37359075  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    | |||||| | |  || |||||| ||||||| |||||||| || || |||||||  ||||| || ||||| || |||||    
T  37359076 tcgatgcactcgtagaagattcagctttctcaaatacaatgatcccatctctgactgcttcctcaagacgggttcccat 37359154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 187
Target Start/End: Original strand, 9548870 - 9549003
Alignment:
Q  54 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 153  Q
    ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  9548870 ataggagcaacagtggccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 9548969  T
Q  154 catttgcggaggattcaactttctcgaatacaat 187  Q
    || |  | ||||||||| ||||||| || |||||    
T  9548970 cactcacagaggattcagctttctcaaacacaat 9549003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 41674544 - 41674420
Alignment:
Q  54 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 153  Q
    ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| || |    
T  41674544 ataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgacg 41674445  T
Q  154 catttgcggaggattcaactttctc 178  Q
    ||||  | ||||||||  |||||||    
T  41674444 cattcacagaggattcggctttctc 41674420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 5637751 - 5637612
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  5637751 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 5637652  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  5637651 tcgatgcactcacagaggattcagctttctcaaacacaat 5637612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 18375745 - 18375840
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 155  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || ||||||    
T  18375745 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgca 18375840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 18501069 - 18501208
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  18501069 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 18501168  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  18501169 tcgacgcattcacagaggattcagctttctcaaacacaat 18501208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 26480233 - 26480094
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  26480233 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 26480134  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  26480133 tcgatgcactcacagaggattcagctttctcaaacacaat 26480094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 30151847 - 30151752
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 155  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || ||||||    
T  30151847 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgca 30151752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 30168298 - 30168171
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 159  Q
    |||| |||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||| |||||| |      
T  30168298 gcaatagtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgatgcactca 30168199  T
Q  160 cggaggattcaactttctcgaatacaat 187  Q
    | ||||||||| ||||||| || |||||    
T  30168198 cagaggattcagctttctcaaacacaat 30168171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 31431269 - 31431130
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||  |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  31431269 gcattgataggagcaacagtagccacagattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 31431170  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  31431169 tcgatgcactcacagaggattcagctttctcaaacacaat 31431130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 31826740 - 31826847
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  31826740 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 31826839  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  31826840 tcgatgca 31826847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 37671813 - 37671920
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  37671813 gcattgataggagcaacggtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 37671912  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  37671913 tcgatgca 37671920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 37754809 - 37754670
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  37754809 gcattgataggtgcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 37754710  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || ||| |||| || |||||| ||||||| || |||||    
T  37754709 tcgacgcacttgcagaagattcagctttctcaaacacaat 37754670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 34616368 - 34616223
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| |||||||||||||| | |||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |    
T  34616368 tgggctgcattgataggtgcaacagtagccatagcttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccat 34616269  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||| |||||| |  | ||||||||| ||||||| || |||||    
T  34616268 atctcttcgatgcactcacagaggattcagctttctcaaacacaat 34616223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 3789367 - 3789228
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  3789367 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 3789268  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  3789267 tcgatgcactcacagaggattcagctttctcaaacacaat 3789228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 33516185 - 33516090
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 155  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  33516185 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 33516090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 32599784 - 32599897
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| ||||| |||||||| || || || ||||| |    
T  32599784 tgggctgcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccattaccat 32599883  T
Q  142 acctctttgatgca 155  Q
    ||||||| ||||||    
T  32599884 acctcttcgatgca 32599897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 13325165 - 13325304
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||| ||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  13325165 gcattgataggagcaacggtagccattgattgaccagctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 13325264  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  13325265 tcgatgcactcacagaggattcagctttctcaaacacaat 13325304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 43078090 - 43077951
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| | |||||||||||| |  || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  43078090 gcattgataggtgcaacagtagccatagcttgaccggctccagttgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 43077991  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  43077990 tcgacgcattcacagaggattcagctttctcaaacacaat 43077951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 28649055 - 28648937
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 159  Q
    |||||||||||||| | |||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||| || |||||      
T  28649055 gcaacagtagccatagcttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcattca 28648956  T
Q  160 cggaggattcaactttctc 178  Q
    | ||||||||| |||||||    
T  28648955 cagaggattcagctttctc 28648937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 28960120 - 28960226
Alignment:
Q  49 cattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 148  Q
    |||| ||||| |||||||||||| | ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| ||||||||    
T  28960120 cattgataggtgcaacagtagccgttgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctctt 28960219  T
Q  149 tgatgca 155  Q
     ||||||    
T  28960220 cgatgca 28960226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 29967387 - 29967517
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| ||||||||||| || || || || ||||| || ||||    
T  29967387 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttctttttgtggtgtccattaccatatctct 29967486  T
Q  148 ttgatgcatttgcggaggattcaactttctc 178  Q
    | || |||||  | ||||||||| |||||||    
T  29967487 tcgacgcattcacagaggattcagctttctc 29967517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 30029256 - 30029126
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| ||||||||||| || || || || ||||| || ||||    
T  30029256 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttctttttgtggtgtccattaccatatctct 30029157  T
Q  148 ttgatgcatttgcggaggattcaactttctc 178  Q
    | || |||||  | ||||||||| |||||||    
T  30029156 tcgacgcattcacagaggattcagctttctc 30029126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 16283328 - 16283103
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||  ||||||| ||||||||||||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  16283328 gatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacaccat 16283229  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    ||||||||| |||||||||||||| || || |||||||| |||||||||||||||||  | ||||||||| |||||||||||||||| || |||||||||    
T  16283228 ccctacttccgtttctttcttcttgtggtgtccgttaccatacctctttgatgcattcacagaggattcagctttctcgaatacaatgattccttctctg 16283129  T
Q  201 atagcttcttctagacgagtccccat 226  Q
    |  |||||||| |||||||| |||||    
T  16283128 acggcttcttccagacgagttcccat 16283103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 19687936 - 19687752
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| || || || ||||| |    
T  19687936 tgggcagcattgataggagcaacagtagccatggattgaccggctccggctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 19687837  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| ||||| || |||||    
T  19687836 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgggttcccat 19687752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 213
Target Start/End: Original strand, 22081252 - 22081420
Alignment:
Q  45 gcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacc 144  Q
    |||||||| || ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||| || || |||     
T  22081252 gcagcattgatgggggcaacagtagccatggattgactggttccggcagataccatccctacttctgtctctttcttcttatgatgaccattgccatact 22081351  T
Q  145 tctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttcta 213  Q
    || ||||||||||||| |||||||||  ||| || || ||||||||||| ||||||| ||| |||||||    
T  22081352 tccttgatgcatttgcagaggattcacatttttcaaacacaataatgccatctctgacagcctcttcta 22081420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 16277392 - 16277208
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  16277392 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 16277293  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||    
T  16277292 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccat 16277208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 14557465 - 14557281
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| || |||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  14557465 tgggctgcattgataggagcgacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 14557366  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||    
T  14557365 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccat 14557281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 2137636 - 2137781
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  2137636 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 2137735  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    ||||||||||||||||  | ||||||||| |||||||||| |||||    
T  2137736 acctctttgatgcattcacagaggattcagctttctcgaacacaat 2137781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 27609282 - 27609466
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  27609282 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 27609381  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||  |||||||||| ||||| || || || ||||  ||||| || |||||||| |||||    
T  27609382 acctctttgatgcattcacagaggattcggctttctcgaacacaatgattccatccctgacggcttcctccagacgagttcccat 27609466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 18710418 - 18710279
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  18710418 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 18710319  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  18710318 tcgatgcattcacagaggattcagctttctcgaacacaat 18710279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 190
Target Start/End: Complemental strand, 19674270 - 19674128
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||||||||||| |||||| || || |||||||| || || |||||||||||||| ||||| || ||||| |||||||    
T  19674270 gcattgataggagcaacggtagccatggattgactggctccagctgacaccatccccacgtccgtttctttcttcttgtgatgtccattaccatacctct 19674171  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataat 190  Q
    | || ||| | || || |||||| |||||||||| ||||||||    
T  19674170 tcgacgcactcgcagaagattcagctttctcgaacacaataat 19674128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 31490133 - 31490263
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| |||||||||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  31490133 gcattgataggggcaacagtagccattgattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 31490232  T
Q  148 ttgatgcatttgcggaggattcaactttctc 178  Q
    | || |||||  | ||||||||| |||||||    
T  31490233 tcgacgcattcacagaggattcagctttctc 31490263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 31354362 - 31354250
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||| || |||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |    
T  31354362 tgggctgcattgataggagcaacggtggccatggattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccat 31354263  T
Q  142 acctctttgatgc 154  Q
    ||||||| |||||    
T  31354262 acctcttcgatgc 31354250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 19208743 - 19208850
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||| |||    
T  19208743 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacttct 19208842  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  19208843 tcgatgca 19208850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 19286297 - 19286158
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  19286297 gcattgataggagcaacagtggccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 19286198  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  19286197 tcgacgcactcgcagaagattcagctttctcaaacacaat 19286158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 28362350 - 28362477
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 159  Q
    ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||| |||||| |      
T  28362350 gcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgatgcactca 28362449  T
Q  160 cggaggattcaactttctcgaatacaat 187  Q
    | ||||||||| ||||||| || |||||    
T  28362450 cagaggattcagctttctcaaacacaat 28362477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 3329902 - 3330080
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||  |||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  3329902 gcattgataggagcaacgatagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 3330001  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || |||||||| |||||    
T  3330002 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgagttcccat 3330080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 226
Target Start/End: Complemental strand, 29829145 - 29828967
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  29829145 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 29829046  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||    
T  29829045 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatctctgacggcttcctcaagacgggttcccat 29828967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 19518526 - 19518665
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  19518526 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 19518625  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  19518626 tcgacgcattcacagaggattcagctttctcaaacacaat 19518665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 33258555 - 33258425
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  33258555 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgcccattaccatatctct 33258456  T
Q  148 ttgatgcatttgcggaggattcaactttctc 178  Q
    | || |||||  | ||||||||| |||||||    
T  33258455 tcgacgcattcacagaggattcagctttctc 33258425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 12093116 - 12093294
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||| ||||||||| ||||| |||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  12093116 gcattgataggagcaatagtagccatagattggccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 12093215  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||    
T  12093216 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccat 12093294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19659372 - 19659423
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 52  Q
    |||||||| ||||||||||||||||||||||||||  || ||| ||||||||    
T  19659372 gatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 19659423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 44562983 - 44562932
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcatt 52  Q
    |||||||| ||||||||||||||||||||||||||  || ||| ||||||||    
T  44562983 gatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 44562932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 107; Significance: 9e-54; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 16 - 226
Target Start/End: Complemental strand, 29627 - 29417
Alignment:
Q  16 gcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttc 115  Q
    |||||||||||||||| |||   |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  29627 gcgcatacgggtacgatggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttc 29528  T
Q  116 tttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctaga 215  Q
    ||||||||| || || |||||||| |||||||||||||||||  | ||||||||| |||| ||||| ||||| || ||||| ||||  |||||||| |||    
T  29527 tttcttcttgtggtgtccgttaccatacctctttgatgcattcacagaggattcagctttttcgaacacaatgattccttccctgacggcttcttccaga 29428  T
Q  216 cgagtccccat 226  Q
    ||||| |||||    
T  29427 cgagttcccat 29417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 40487 - 40671
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || |||||||| |    
T  40487 tgggctgcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccat 40586  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || |||||||| |||||    
T  40587 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagttcccat 40671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 47403 - 47587
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||| | |||||||||||||||| |||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  47403 tgggctgcattgataagagcaacagtagccatgggttgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 47502  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  ||||||||||| |||||||||| ||||| || || || ||||  |||||||| ||||| || |||||    
T  47503 acctctttgatgcattcacggaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgggttcccat 47587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 21446 - 21234
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccat 100  Q
    |||||||| ||||||||   ||| |||||| ||||  || ||| | |||||| || |||||||||||||||| |||||||| || |||||||||||||||    
T  21446 gatgctgagagtattgcatgtactggtacggcggaggtagctgagaagcattgatgggggcaacagtagccacggattgactggttccggcagataccat 21347  T
Q  101 ccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctg 200  Q
    |||||||||||| |||||||||||||||||||| ||||| ||| || ||||||||||||| ||||||||| ||||||| || |||||||| || ||||||    
T  21346 ccctacttctgtctctttcttcttatgatgaccattaccatacttccttgatgcatttgcagaggattcacctttctcaaacacaataattccgtctctg 21247  T
Q  201 atagcttcttcta 213  Q
    | ||| |||||||    
T  21246 acagcctcttcta 21234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 7e-42; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 42 - 220
Target Start/End: Complemental strand, 24863552 - 24863374
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| || || || ||||| |    
T  24863552 tgggctgcattgataggagcaacagtagccatggattgaccggctccggctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 24863453  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagt 220  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||||||    
T  24863452 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagt 24863374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 13299312 - 13299496
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  13299312 tgggctgcattgataggagcaacagtagccatggattgaccagctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 13299411  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    | ||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||    
T  13299412 atctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccat 13299496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 22935238 - 22935422
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| |||||||||| ||||||||||||||| ||||| || |||||||||| ||| |||||||||||||| || || |||||||| |    
T  22935238 tgggctgcattgataggagcaacagtagtcatggattgaccggccccggctgacaccatccctatttccgtttctttcttcttgtggtgtccgttaccat 22935337  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||    
T  22935338 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccat 22935422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 23857683 - 23857867
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| |||||||||| ||||||||||||||| ||||| || |||||||||| ||| |||||||||||||| || || |||||||| |    
T  23857683 tgggctgcattgataggagcaacagtagtcatggattgaccggccccggctgacaccatccctatttccgtttctttcttcttgtggtgtccgttaccat 23857782  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||    
T  23857783 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccat 23857867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 47 - 226
Target Start/End: Complemental strand, 20160534 - 20160358
Alignment:
Q  47 agcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctc 146  Q
    |||||||| ||||||||||||||||||||||||||||||    ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  20160534 agcattaacaggggcaacagtagccatggattgaccggca---gcaaattccatccctacttctgtttccttcttcttatgatgaccgttaccgtacctt 20160438  T
Q  147 tttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    |||| |||  |  ||||||||||| |||| || || ||||| || ||||| |||| ||||||||||||||| || |||||    
T  20160437 tttggtgcgctcacggaggattcacctttatcaaacacaatgattccttccctgacagcttcttctagacgggttcccat 20160358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 22172297 - 22172473
Alignment:
Q  47 agcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctc 146  Q
    |||||||| ||||||||||||||||||||||||||||||    ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  22172297 agcattaacaggggcaacagtagccatggattgaccggca---gcaaattccatccctacttctgtttccttcttcttatgatgaccgttaccgtacctt 22172393  T
Q  147 tttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    |||| |||  |  ||||||||||| |||| || || ||||| || ||||| |||| ||||||||||||||| || |||||    
T  22172394 tttggtgcgctcacggaggattcacctttatcaaacacaatgattccttccctgacagcttcttctagacgggttcccat 22172473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 15424678 - 15424862
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  15424678 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 15424777  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | || |||||| |||||||||| ||||| || ||||| ||||  ||||| || |||||||| |||||    
T  15424778 acctctttgatgcattcacagaagattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagttcccat 15424862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 26988836 - 26988652
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  26988836 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 26988737  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||    
T  26988736 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccat 26988652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 26999908 - 26999724
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  26999908 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 26999809  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||    
T  26999808 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccat 26999724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 24304979 - 24305124
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  24304979 tgggcagcattgataggagcgacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 24305078  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    ||||||||||||||||  | ||||||||| |||||||||| |||||    
T  24305079 acctctttgatgcattcacagaggattcagctttctcgaacacaat 24305124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 26918209 - 26918070
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  26918209 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 26918110  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  26918109 tcgatgcattcacagaggattcagctttctcgaacacaat 26918070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 187
Target Start/End: Complemental strand, 16749677 - 16749544
Alignment:
Q  54 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 153  Q
    ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  16749677 ataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 16749578  T
Q  154 catttgcggaggattcaactttctcgaatacaat 187  Q
    || |  | ||||||||| |||||||||| |||||    
T  16749577 cactcacagaggattcagctttctcgaacacaat 16749544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 29549307 - 29549168
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| ||||| || ||||| |||||||    
T  29549307 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtgatgtccattaccatacctct 29549208  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  29549207 tcgatgcactcacagaggattcagctttctcaaacacaat 29549168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 27044225 - 27044080
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |    
T  27044225 tgggctgcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccat 27044126  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||| |||||| |  | ||||||||| ||||||| || |||||    
T  27044125 atctcttcgatgcactcacagaggattcagctttctcaaacacaat 27044080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22477593 - 22477673
Alignment:
Q  1 gatgctgacagtattgcgcatacgggtacgacggaaataactgggcagcattaataggggcaacagtagccatggattgac 81  Q
    |||||||| |||| |||||||||||||||||| ||  ||| |||||||||||||| |||||||||||||||||||||||||    
T  22477593 gatgctgagagtactgcgcatacgggtacgacagaggtaattgggcagcattaattggggcaacagtagccatggattgac 22477673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 3695892 - 3695753
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  3695892 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 3695793  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  3695792 tcgatgcattcacagaggattcagctttctcaaacacaat 3695753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 4525118 - 4525011
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4525118 gcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 4525019  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  4525018 tcgatgca 4525011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 4757590 - 4757483
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| || ||||||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4757590 gcattgataggagcgacagtagccattgattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 4757491  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  4757490 tcgatgca 4757483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 4772826 - 4772687
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  4772826 gcattgataggagcaacggtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 4772727  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  4772726 tcgatgcactcacagaggattcagctttctcaaacacaat 4772687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 27007541 - 27007402
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27007541 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27007442  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  27007441 tcgatgcactcacagaggattcagctttctcaaacacaat 27007402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 27484946 - 27484807
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||| ||||    
T  27484946 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtatctct 27484847  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  27484846 tcgatgcactcacagaggattcagctttctcaaacacaat 27484807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 29572842 - 29572735
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  29572842 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 29572743  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  29572742 tcgatgca 29572735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 17025097 - 17024952
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| |||||||||||||| | |||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| |    
T  17025097 tgggctgcattgataggagcaacagtagccatagcttgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccat 17024998  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    ||||||| ||||||||  | ||||||||  ||||||| || |||||    
T  17024997 acctcttcgatgcattcacagaggattcggctttctcaaacacaat 17024952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 29501235 - 29501096
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  29501235 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 29501136  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  |  |||||||| ||||||| || |||||    
T  29501135 tcgacgcattcacaaaggattcagctttctcaaacacaat 29501096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 30558395 - 30558490
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 155  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  30558395 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 30558490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 34463728 - 34463867
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  34463728 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 34463827  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  34463828 tcgacgcattcacagaggattcagctttctcaaacacaat 34463867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 16944394 - 16944524
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  16944394 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 16944493  T
Q  148 ttgatgcatttgcggaggattcaactttctc 178  Q
    | || |||||  | ||||||||| |||||||    
T  16944494 tcgacgcattcacagaggattcagctttctc 16944524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 154
Target Start/End: Original strand, 26778000 - 26778100
Alignment:
Q  54 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 153  Q
    ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  26778000 ataggtgcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 26778099  T
Q  154 c 154  Q
    |    
T  26778100 c 26778100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 27360377 - 27360484
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27360377 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27360476  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  27360477 tcgatgca 27360484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 27450720 - 27450827
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27450720 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27450819  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  27450820 tcgatgca 27450827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 4546151 - 4546329
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  4546151 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 4546250  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||    
T  4546251 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccat 4546329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 226
Target Start/End: Complemental strand, 28207271 - 28207093
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  28207271 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 28207172  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||    
T  28207171 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccat 28207093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 16673956 - 16673817
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  16673956 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 16673857  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  16673856 tcgacgcattcacagaggattcagctttctcaaacacaat 16673817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 4724510 - 4724688
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| ||||| |    
T  4724510 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccataccttt 4724609  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||    
T  4724610 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccat 4724688  T

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Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 26116792 - 26116893
Alignment:
Q  54 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 153  Q
    ||||| ||||| ||||| || |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||| ||||    
T  26116792 ataggagcaacggtagctatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgatg 26116891  T
Q  154 ca 155  Q
    ||    
T  26116892 ca 26116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 226
Target Start/End: Original strand, 27272947 - 27273128
Alignment:
Q  45 gcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacc 144  Q
    |||||||||| |||||| ||||||||  | |  ||||| ||||| |  |||||||| || || |||||||| |||||||| || || || || || ||||    
T  27272947 gcagcattaacaggggcgacagtagctgtagtctgacctgctccagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacc 27273046  T
Q  145 tctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||  |  ||||||  || || ||| | ||||| |||||||| || ||||| ||||  ||||| |||||||||||||||||    
T  27273047 tcttcaacccatttgtagaagactcacccttctcaaatacaatgataccttccctgacggcttcctctagacgagtccccat 27273128  T

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Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 226
Target Start/End: Original strand, 27630077 - 27630254
Alignment:
Q  49 cattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 148  Q
    |||||| |||||| ||||||||| | || ||||| ||||| |  |||||||| || || |||||||| |||||||| || || || || || ||||||||    
T  27630077 cattaacaggggcgacagtagccgtagactgacctgctcccgaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 27630176  T
Q  149 tgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
     ||  || |||  || || ||| | ||||| |||||||| || || |||||||  || || |||||||||||||||||    
T  27630177 cgacccacttgtagaagactcacccttctcaaatacaatgataccctctctgacggcctcctctagacgagtccccat 27630254  T

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Target: scaffold0143 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 27130 - 26946
Alignment:
Q  42 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 141  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  27130 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 27031  T
Q  142 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||    
T  27030 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccat 26946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 226
Target Start/End: Original strand, 554 - 732
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |  || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  554 gcattgataggagcaacagtagccatggattgaccggctccagttgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 653  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| ||||| || |||||    
T  654 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgggttcccat 732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 8064 - 7925
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||  |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  8064 gcattgataggagcaacagtagccacagattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 7965  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  7964 tcgatgcattcacagaggattcagctttctcaaacacaat 7925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 226
Target Start/End: Original strand, 48568 - 48757
Alignment:
Q  44 ggcagcattaataggggcaacag-tagccatggattga--ccggctccggca-gataccatccc-tacttctgtttctttcttcttatgatgacc-gtta 137  Q
    ||||||||| ||||| ||||||| |||||||||||||   |||||||||||| || |||||||| |||||| |||||||||||||| || || || ||||    
T  48568 ggcagcattgataggagcaacaggtagccatggattggacccggctccggcaagacaccatcccctacttccgtttctttcttcttgtggtgtcccgtta 48667  T
Q  138 ccgtacctcttt-gatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    || ||||||||| ||||||||  | ||||||||| |||||||||| ||||| || ||||||||||  |||||||| |||||||| |||||    
T  48668 ccatacctcttttgatgcattcacagaggattcagctttctcgaacacaatgattccttctctgacggcttcttccagacgagttcccat 48757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 7663 - 7770
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  7663 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 7762  T
Q  148 ttgatgca 155  Q
    | ||||||    
T  7763 tcgatgca 7770  T

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Target: scaffold0144 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 26626 - 26765
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  26626 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 26725  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    | || |||||| | ||||||||| ||||||| || |||||    
T  26726 tcgacgcatttacagaggattcagctttctcaaacacaat 26765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 15366 - 15461
Alignment:
Q  60 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 155  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || ||||||    
T  15366 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgca 15461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 9490 - 9593
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  9490 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 9589  T
Q  148 ttga 151  Q
    ||||    
T  9590 ttga 9593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 226
Target Start/End: Complemental strand, 7769 - 7591
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 147  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  7769 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 7670  T
Q  148 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 226  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||    
T  7669 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccat 7591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 5821 - 5682
Alignment:
Q  48 gcattaataggggcaacagtagccatg-gattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctc 146  Q
    ||||| ||||| ||||||||||||||  |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || |||    
T  5821 gcattgataggagcaacagtagccatttgattgaccggctccagctgacaccatccc-acttccgtttctttcttcttgtggtgtccattaccatatctc 5723  T
Q  147 tttgatgcatttgcggaggattcaactttctcgaatacaat 187  Q
    || || |||||  | ||||||||| ||||||| || |||||    
T  5722 ttcgacgcattcacagaggattcagctttctcaaacacaat 5682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0496 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 157 - 197
Alignment:
Q  48 gcattaataggggcaacagtagccatggattgaccggctcc 88  Q
    ||||| ||||| |||||||||||||| ||||||||||||||    
T  157 gcattgataggtgcaacagtagccattgattgaccggctcc 197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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