View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6867A_low_454 (Length: 222)
Name: NF6867A_low_454
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6867A_low_454 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 25933609 - 25933830
Alignment:
| Q |
1 |
gtttcctttgcaagcaggcttttactaatggaatatgcaacccatcttttaagaattgctacaacattatttgaagaaatggttaagaaccttgagctga |
100 |
Q |
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| T |
25933609 |
gtttcctttgcaagcaggcttttactaatggaatatgcaacccatcttttaagaattgctacaacattatttgaagcaatggttaagaaccttgagctga |
25933708 |
T |
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| Q |
101 |
atctgagaacaacaaagtcatatttatcagaaaacaatggcaacatacgtgtctatcgttatccacccactgatgttggttggggcatggaggttcatac |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25933709 |
atctgaaaacaacaaagtcatatttatcagaaaacaatggcaacatacgtgtctatcgttatccacccactgatgttggttggggcatggaggttcatac |
25933808 |
T |
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| Q |
201 |
agatagttcagtgttgtccata |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
25933809 |
agatagttcagtgttgtccata |
25933830 |
T |
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