View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6867A_low_460 (Length: 221)
Name: NF6867A_low_460
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6867A_low_460 |
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Alignment Details
Target: chr3 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 2337190 - 2337373
Alignment:
| Q |
16 |
acatcaaaatctacaaaattggagagaaggcacgggaatggggagatatgacatactcttggatatacttcttagaatttgttgggtcaggaatccaatg |
115 |
Q |
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| T |
2337190 |
acatcaaaatctacaaaactggagagaaggcacgggaatgaggagatatgacatactcttggatatacttcttaggatttgttgggtcaggaatccaatg |
2337289 |
T |
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| Q |
116 |
aatctcactcatgtttggtgtctcaacgtaggacatagtaaattcccctatcttctcaagctttcctctcttacctgcccttag |
199 |
Q |
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| T |
2337290 |
aatctcactcatgtttggtgtctcaacgtaggacatagtaaattctcctatcttctcaagctttcctctcttacctgcccttag |
2337373 |
T |
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