View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6867A_low_96 (Length: 353)
Name: NF6867A_low_96
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6867A_low_96 |
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Alignment Details
Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 15956570 - 15956919
Alignment:
| Q |
1 |
tcaactcttttaatctttattaagatagttatctaaattacttttaatttgttttaatattttaagtgaatgtatcaatatataaaactatatacatacc |
100 |
Q |
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| T |
15956570 |
tcaactcttttaatatttattaagatagttatctaaattacttttaatttgttttaatattttaagtgaatgtatcaatatataaaactatatacatacc |
15956669 |
T |
|
| Q |
101 |
aaataatttgcggaagttgaaccattggtaagagcaagcactagcttgtatttgtatttccaaattcccatgagcttgtttaacttcaaaggcattacca |
200 |
Q |
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| T |
15956670 |
aaataatttgcggaagttgaaccattggtaagagcaagcactagcttgtatttgtatttccaaattcccatgagcttgtttaacttcaaaggcattacca |
15956769 |
T |
|
| Q |
201 |
acatggagcaaccacaattgtgaaggtacttcaagtggttttctccaatctcnnnnnnngctttcaggtttgtttggaaacctagggagtaagtatattg |
300 |
Q |
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| T |
15956770 |
acatggagcaaccacaattgtgaaggtacttcaagtggttttctccaatctctttttttgctttcaggtttgtttggaaacctagggagtaagtatattg |
15956869 |
T |
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| Q |
301 |
gtgatgtactcttacttgggttcactgttaatgctgatattcttggagat |
350 |
Q |
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| T |
15956870 |
gtgatgtactcttacttgggttcactgttaatgctgatatcattggagat |
15956919 |
T |
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