View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6867A_low_99 (Length: 350)
Name: NF6867A_low_99
Description: NF6867A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6867A_low_99 |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 13 - 328
Target Start/End: Original strand, 7653938 - 7654253
Alignment:
| Q |
13 |
aatatctcgaataggattacttcttgtgcaagaaacatattagaaaccnnnnnnnnnnnnngagaaccatcttgtgcaagaaacccacttgaaggatact |
112 |
Q |
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| T |
7653938 |
aatatctcgaataggattacttcttgtgcaagaaacatattagaaaccaaaaagtaaaaaagaaaaccatcttgtgcaagaaacccacttgaaggatatt |
7654037 |
T |
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| Q |
113 |
attgatacattgatgattaatatgaaagtatatgtggctagcaatcatgatttacttttctaacactcgtatacaaaatgtctccttactcatgtcacaa |
212 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7654038 |
attgatacattgatgattaatatgaaagtatatgtgattagcaatcatgatttacttttctaacactcgtatacaaaatgtctccttactcatgtcacaa |
7654137 |
T |
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| Q |
213 |
cacaatttataatatatatcacactcattccattgcatcgccactatattattttgaaactaaaatgcattaaaaataaacttggtcagttctgtttgtc |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7654138 |
cacaatttataatatatatcacactcattccattgcatcgccactatattattttgaaactaaaatgcattaaaaataaacttggtcagttctgtttgtc |
7654237 |
T |
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| Q |
313 |
ctcaaatgttaaggct |
328 |
Q |
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|||||||||||||||| |
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| T |
7654238 |
ctcaaatgttaaggct |
7654253 |
T |
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