View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6868A_low_114 (Length: 284)

Name: NF6868A_low_114
Description: NF6868A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6868A_low_114
NF6868A_low_114
[»] chr6 (5 HSPs)
chr6 (118-246)||(35232948-35233076)
chr6 (119-199)||(12646660-12646740)
chr6 (119-231)||(24894400-24894512)
chr6 (122-186)||(13027977-13028041)
chr6 (125-216)||(11297367-11297459)
[»] chr3 (7 HSPs)
chr3 (122-231)||(38647746-38647855)
chr3 (118-222)||(26433255-26433359)
chr3 (131-222)||(11896634-11896725)
chr3 (122-200)||(55025366-55025444)
chr3 (122-186)||(3660179-3660243)
chr3 (119-231)||(23423975-23424087)
chr3 (122-194)||(11890310-11890382)
[»] chr4 (3 HSPs)
chr4 (118-227)||(3881193-3881302)
chr4 (122-231)||(46785039-46785148)
chr4 (122-222)||(54477972-54478072)
[»] chr8 (1 HSPs)
chr8 (122-222)||(23133146-23133246)
[»] chr2 (6 HSPs)
chr2 (118-222)||(14654237-14654341)
chr2 (122-204)||(572693-572775)
chr2 (122-186)||(39012049-39012113)
chr2 (122-225)||(16321929-16322032)
chr2 (122-225)||(42403781-42403884)
chr2 (122-222)||(35135783-35135883)
[»] chr1 (7 HSPs)
chr1 (122-222)||(20284335-20284435)
chr1 (120-231)||(31325512-31325623)
chr1 (118-227)||(50451376-50451485)
chr1 (122-221)||(43297845-43297944)
chr1 (122-216)||(23464829-23464923)
chr1 (122-192)||(50237129-50237199)
chr1 (122-228)||(5193618-5193724)
[»] chr7 (1 HSPs)
chr7 (119-225)||(23208430-23208536)
[»] chr5 (2 HSPs)
chr5 (118-222)||(7813310-7813414)
chr5 (128-228)||(23944495-23944595)


Alignment Details
Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 35233076 - 35232948
Alignment:
Q  118 aatatgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcattttta 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35233076 aatatgccaatattgcttgaagaatatgcaatggaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcattttta 35232977  T
Q  218 gtgataggtttggtaagcgagttgatgtc 246  Q
    |||||||||||||||||||||||||||||    
T  35232976 gtgataggtttggtaagcgagttgatgtc 35232948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 12646660 - 12646740
Alignment:
Q  119 atatgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggca 199  Q
    ||||||||||||||||||||||| ||||  | ||| ||||| || || || |||||||| |||||||||||||||||||||    
T  12646660 atatgccaatattgcttgaagaaaatgctttggaagccatccgggccaggtgctttgtaaggtttcatggagtttagggca 12646740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 24894400 - 24894512
Alignment:
Q  119 atatgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttag 218  Q
    |||||||||||||| ||||| || || |||| ||| ||||| |  || || |||||||| |||||||||||||| |||||  |||| ||||||||||| |    
T  24894400 atatgccaatattgtttgaaaaagatacaatggaatccatccgagccaggggctttgtatggtttcatggagttgagggcgacaaaaacttcatttttgg 24894499  T
Q  219 tgataggtttggt 231  Q
    ||||||| |||||    
T  24894500 tgataggcttggt 24894512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 13027977 - 13028041
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcat 186  Q
    |||||||||||||| || ||||| || | ||| ||||||||||| ||||||||||||||||||||    
T  13027977 tgccaatattgcttaaaaaatatacattggaagccatctggtccaggagctttgtagggtttcat 13028041  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 216
Target Start/End: Original strand, 11297367 - 11297459
Alignment:
Q  125 caatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagttta-gggcagcaaagacttcattttt 216  Q
    ||||||||||||||||| |||||||  || ||||  |||| || |||||| || |||||||| ||||| | ||||||| || |||||||||||    
T  11297367 caatattgcttgaagaaaatgcaatgaaagccattgggtcatgaagctttctaaggtttcatagagttgaggggcagcgaacacttcattttt 11297459  T

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Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 38647746 - 38647855
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttagtga 221  Q
    ||||||||||| |||||||| || |||| |||||||||||| || || |||||||| |||||||||||||| || |||||||| || |||||||| ||||    
T  38647746 tgccaatattgtttgaagaagatacaatggaaaccatctgggccgggtgctttgtaaggtttcatggagttaagtgcagcaaacacctcatttttggtga 38647845  T
Q  222 taggtttggt 231  Q
    ||||||||||    
T  38647846 taggtttggt 38647855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 222
Target Start/End: Original strand, 26433255 - 26433359
Alignment:
Q  118 aatatgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcattttta 217  Q
    ||||||||| || || |||||||| ||||||| ||||||||| || || || |||||||| || ||||||||||| ||||||||| | ||||||||||||    
T  26433255 aatatgccagtactgtttgaagaagatgcaatggaaaccatcaggaccaggggctttgtaaggcttcatggagttaagggcagcataaacttcattttta 26433354  T
Q  218 gtgat 222  Q
    |||||    
T  26433355 gtgat 26433359  T

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Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 11896725 - 11896634
Alignment:
Q  131 tgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttagtgat 222  Q
    ||||||||||| ||||||| ||||||||| || || || ||||||||||||||||||||||| |||||| || | ||||||||||| |||||    
T  11896725 tgcttgaagaagatgcaatggaaaccatccggaccaggggctttgtagggtttcatggagttaagggcaacataaacttcatttttggtgat 11896634  T

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Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 200
Target Start/End: Original strand, 55025366 - 55025444
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcag 200  Q
    ||||||||||| ||||| |||||||| | |||||||||||| || ||||||||||| |||||||||| ||| |||||||    
T  55025366 tgccaatattgtttgaaaaatatgcattggaaaccatctgggccaggagctttgtaaggtttcatggtgttaagggcag 55025444  T

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Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 3660179 - 3660243
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcat 186  Q
    |||||||||||||| || |||||||| | ||| ||||||||||| || |||||||||||||||||    
T  3660179 tgccaatattgcttaaaaaatatgcattggaagccatctggtccaggggctttgtagggtttcat 3660243  T

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Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 23424087 - 23423975
Alignment:
Q  119 atatgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttag 218  Q
    |||||||||||||| ||||| || || |||| ||| ||||| |  || || |||||||| | |||||||||||| |||||  |||| ||||||||||| |    
T  23424087 atatgccaatattgtttgaaaaagatacaatggaatccatccgtgccaggtgctttgtatgttttcatggagttgagggctacaaaaacttcatttttgg 23423988  T
Q  219 tgataggtttggt 231  Q
    ||||||| |||||    
T  23423987 tgataggcttggt 23423975  T

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Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 11890310 - 11890382
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagttta 194  Q
    |||||||||||||| ||||| ||||||| ||||||||| || ||||| | ||| || || |||||||| ||||    
T  11890310 tgccaatattgcttaaagaaaatgcaatggaaaccatcaggacctggtgatttataaggcttcatggaattta 11890382  T

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Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 3881302 - 3881193
Alignment:
Q  118 aatatgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcattttta 217  Q
    |||||||||||| || |||||||| ||||||| ||||||||| || || |||||||| || ||||||||||||||| |||||||||| ||||| || |||    
T  3881302 aatatgccaatactgtttgaagaagatgcaatggaaaccatccgggccaggagctttataaggtttcatggagttttgggcagcaaaaacttctttctta 3881203  T
Q  218 gtgataggtt 227  Q
    ||||| ||||    
T  3881202 gtgatgggtt 3881193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 46785039 - 46785148
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttagtga 221  Q
    ||||| ||||| |||||||| ||||| | ||||||||| || || |||| ||||||||||||||||||||| ||||| ||  | ||||| | ||| || |    
T  46785039 tgccagtattgtttgaagaagatgcattggaaaccatccggaccaggagatttgtagggtttcatggagttgagggctgctgaaacttcctctttggtaa 46785138  T
Q  222 taggtttggt 231  Q
    ||||||||||    
T  46785139 taggtttggt 46785148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 54477972 - 54478072
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttagtga 221  Q
    ||||||||||| |||||||| ||| | | ||| |||||||| ||||  ||||| ||||| ||||| ||||| |||| |||||| || || ||||| ||||    
T  54477972 tgccaatattgtttgaagaagatgtagtggaagccatctgggcctgaggctttatagggcttcatagagttaagggaagcaaacacctcttttttggtga 54478071  T
Q  222 t 222  Q
    |    
T  54478072 t 54478072  T

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Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 23133146 - 23133246
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttagtga 221  Q
    ||||| || ||||||||||| ||||||| ||||||||| || || || ||||||||||||||||||||||| ||||||||| | ||||||||||| ||||    
T  23133146 tgccagtactgcttgaagaagatgcaatggaaaccatccggaccaggggctttgtagggtttcatggagttaagggcagcataaacttcatttttggtga 23133245  T
Q  222 t 222  Q
    |    
T  23133246 t 23133246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 222
Target Start/End: Original strand, 14654237 - 14654341
Alignment:
Q  118 aatatgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcattttta 217  Q
    ||||||| | || ||||||||||| ||||||| |||||||||||| || || ||||||||||| ||||||||||| ||||||||| | |||||||||||     
T  14654237 aatatgctagtactgcttgaagaagatgcaatggaaaccatctggaccaggggctttgtagggcttcatggagttaagggcagcataaacttcatttttg 14654336  T
Q  218 gtgat 222  Q
    |||||    
T  14654337 gtgat 14654341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 572775 - 572693
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaa 204  Q
    ||||||||||| |||||||| ||||||| ||| |||||||| || || ||||||||||||||||||||||| |||||| ||||    
T  572775 tgccaatattgtttgaagaagatgcaatggaagccatctggcccgggtgctttgtagggtttcatggagttaagggcaacaaa 572693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 39012113 - 39012049
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcat 186  Q
    |||||||||||||| || |||||||| | ||| ||||||||||| || |||||||||||||||||    
T  39012113 tgccaatattgcttaaaaaatatgcattggaagccatctggtccaggggctttgtagggtttcat 39012049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 16322032 - 16321929
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttagtga 221  Q
    ||||| ||||| || ||||| |||||||  || ||||| || || || ||||||||||||||||||||||| ||||||||||| || || ||||| || |    
T  16322032 tgccagtattgtttaaagaaaatgcaatgaaagccatcgggaccaggtgctttgtagggtttcatggagttgagggcagcaaaaacctcttttttggtaa 16321933  T
Q  222 tagg 225  Q
    ||||    
T  16321932 tagg 16321929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 42403781 - 42403884
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttagtga 221  Q
    ||||||||||| |||||||| ||||||| ||||||||| || || || || ||||| || ||||| ||||| |||||  |||| ||||||||||| || |    
T  42403781 tgccaatattgtttgaagaagatgcaatggaaaccatcaggaccaggtgccttgtaaggcttcatagagttgagggccacaaaaacttcatttttggtaa 42403880  T
Q  222 tagg 225  Q
    ||||    
T  42403881 tagg 42403884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 35135783 - 35135883
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttagtga 221  Q
    ||||| |||||||||||||| |||||||  || || || || || || |||||||| || ||||| ||||| |||||||| || ||||||  ||||||||    
T  35135783 tgccagtattgcttgaagaaaatgcaatgaaacccgtcaggaccaggggctttgtatggcttcatagagttgagggcagcgaacacttcagatttagtga 35135882  T
Q  222 t 222  Q
    |    
T  35135883 t 35135883  T

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Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 20284435 - 20284335
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttagtga 221  Q
    ||||| || ||||||||||| ||||||| ||||||||| || || || ||||||||||||||||||||||| ||||||||| | ||||||||||| ||||    
T  20284435 tgccagtactgcttgaagaagatgcaatggaaaccatccggaccaggggctttgtagggtttcatggagttaagggcagcataaacttcatttttggtga 20284336  T
Q  222 t 222  Q
    |    
T  20284335 t 20284335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 31325512 - 31325623
Alignment:
Q  120 tatgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttagt 219  Q
    ||||||||||||| |||||||| || |||| |||||||||||   | || |||||||| |||||||||||||| ||||||||| | ||||||||||| ||    
T  31325512 tatgccaatattgtttgaagaagatacaatggaaaccatctgagtcaggtgctttgtaaggtttcatggagttaagggcagcataaacttcatttttggt 31325611  T
Q  220 gataggtttggt 231  Q
    |||||| |||||    
T  31325612 gataggcttggt 31325623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 50451485 - 50451376
Alignment:
Q  118 aatatgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcattttta 217  Q
    ||||||||| || || |||||||| ||||||| ||||||||| || || |||||||| || ||||||||||||||||| |||||||| ||||| || |||    
T  50451485 aatatgccagtactgtttgaagaagatgcaatggaaaccatccgggccgggagctttataaggtttcatggagtttagtgcagcaaacacttcgttctta 50451386  T
Q  218 gtgataggtt 227  Q
    ||||| ||||    
T  50451385 gtgatgggtt 50451376  T

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Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 43297944 - 43297845
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttagtga 221  Q
    ||||||||||| |||||||| ||||||| ||| ||||| ||  | || ||||||||||||||||||||||| ||||| | ||| || |||||||| ||||    
T  43297944 tgccaatattgtttgaagaagatgcaatggaagccatcagggtcgggtgctttgtagggtttcatggagttaagggcggtaaacacatcatttttggtga 43297845  T

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Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 23464923 - 23464829
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcattttt 216  Q
    ||||| ||||| ||||| || ||||| | ||| |||||||||||||| |||||||| |||||||| ||||| |||  ||||| ||||||||||||    
T  23464923 tgccagtattgtttgaaaaaaatgcattggaagccatctggtcctggtgctttgtaaggtttcatagagttaaggatagcaaggacttcattttt 23464829  T

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Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 50237129 - 50237199
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtt 192  Q
    ||||||||||| |||||||| ||||||| ||| ||||||||||| || |||||||| |||||||| |||||    
T  50237129 tgccaatattgtttgaagaaaatgcaatggaagccatctggtccaggtgctttgtaaggtttcattgagtt 50237199  T

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Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 5193618 - 5193724
Alignment:
Q  122 tgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttagtga 221  Q
    ||||||||||| || ||||| ||||||| |||  |||| ||  | || |||||||| ||||||||||| || ||||||||||| |||||||| || |||     
T  5193618 tgccaatattgtttaaagaagatgcaatggaagtcatcggggtcgggtgctttgtatggtttcatggaattaagggcagcaaacacttcattcttggtgg 5193717  T
Q  222 taggttt 228  Q
    |||||||    
T  5193718 taggttt 5193724  T

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Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 23208430 - 23208536
Alignment:
Q  119 atatgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttag 218  Q
    |||||||||||||| |||||||| || |||| ||| || || || || || |||||||| ||||||||||| || |||||| |||| ||||||||||| |    
T  23208430 atatgccaatattgtttgaagaagatacaatggaagccgtccgggccaggggctttgtatggtttcatggaattgagggcaacaaaaacttcatttttgg 23208529  T
Q  219 tgatagg 225  Q
    |||||||    
T  23208530 tgatagg 23208536  T

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Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 222
Target Start/End: Complemental strand, 7813414 - 7813310
Alignment:
Q  118 aatatgccaatattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcattttta 217  Q
    ||||||||| || || |||||||| || |||| |||||| || |||||||| |||||||| |||||||| || || |||| |||||| |||||||||||     
T  7813414 aatatgccagtactgtttgaagaagatacaatggaaaccgtcaggtcctggggctttgtaaggtttcatagacttgagggtagcaaaaacttcatttttg 7813315  T
Q  218 gtgat 222  Q
    |||||    
T  7813314 gtgat 7813310  T

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Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 23944595 - 23944495
Alignment:
Q  128 tattgcttgaagaatatgcaatagaaaccatctggtcctggagctttgtagggtttcatggagtttagggcagcaaagacttcatttttagtgataggtt 227  Q
    |||||||||||||| || || |  ||||||||||| || || |||||| |||||||||||| ||| |||||||| || |||||| | ||||| |||||||    
T  23944595 tattgcttgaagaagatacattgaaaaccatctgggccaggggctttgaagggtttcatggtgttaagggcagcgaatacttcactcttagtaataggtt 23944496  T
Q  228 t 228  Q
    |    
T  23944495 t 23944495  T

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