View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6868A_low_130 (Length: 273)

Name: NF6868A_low_130
Description: NF6868A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6868A_low_130
NF6868A_low_130
[»] chr1 (5 HSPs)
chr1 (50-273)||(7801484-7801708)
chr1 (11-49)||(20759076-20759114)
chr1 (11-49)||(36233278-36233316)
chr1 (11-49)||(36234032-36234070)
chr1 (11-43)||(24157729-24157761)
[»] chr3 (7 HSPs)
chr3 (11-50)||(5553167-5553206)
chr3 (11-50)||(25531605-25531644)
chr3 (11-49)||(5554467-5554505)
chr3 (11-49)||(23460172-23460210)
chr3 (11-43)||(13041906-13041938)
chr3 (11-43)||(13049983-13050015)
chr3 (11-49)||(47566446-47566484)
[»] scaffold0026 (2 HSPs)
scaffold0026 (11-49)||(738-776)
scaffold0026 (11-49)||(86553-86591)
[»] scaffold0021 (2 HSPs)
scaffold0021 (11-49)||(17627-17665)
scaffold0021 (11-49)||(27158-27196)
[»] scaffold0018 (1 HSPs)
scaffold0018 (11-49)||(761-799)
[»] chr8 (4 HSPs)
chr8 (11-49)||(8366077-8366115)
chr8 (11-43)||(17277385-17277417)
chr8 (11-43)||(17278350-17278382)
chr8 (11-49)||(17277647-17277685)
[»] chr7 (8 HSPs)
chr7 (11-49)||(9647611-9647649)
chr7 (11-49)||(40998895-40998933)
chr7 (11-49)||(41000755-41000793)
chr7 (11-43)||(7842652-7842684)
chr7 (11-50)||(24790191-24790230)
chr7 (11-49)||(24790092-24790130)
chr7 (11-48)||(9596112-9596149)
chr7 (11-48)||(9647075-9647112)
[»] chr6 (2 HSPs)
chr6 (11-49)||(12037095-12037133)
chr6 (11-49)||(12036986-12037024)
[»] chr5 (3 HSPs)
chr5 (11-49)||(38936687-38936725)
chr5 (11-49)||(245114-245152)
chr5 (11-49)||(21352763-21352801)
[»] chr4 (7 HSPs)
chr4 (11-49)||(13518636-13518674)
chr4 (11-49)||(9399295-9399333)
chr4 (11-49)||(15018316-15018354)
chr4 (11-49)||(15019956-15019994)
chr4 (11-49)||(39488826-39488864)
chr4 (11-49)||(46690478-46690516)
chr4 (11-48)||(13518100-13518137)
[»] chr2 (6 HSPs)
chr2 (11-49)||(22299660-22299698)
chr2 (11-49)||(22300572-22300610)
chr2 (11-49)||(24806059-24806097)
chr2 (11-49)||(24806961-24806999)
chr2 (11-49)||(24808817-24808855)
chr2 (11-50)||(31974169-31974208)
[»] scaffold0359 (1 HSPs)
scaffold0359 (11-43)||(8938-8970)
[»] scaffold0269 (1 HSPs)
scaffold0269 (11-49)||(2043-2081)
[»] scaffold0025 (1 HSPs)
scaffold0025 (11-49)||(54826-54864)
[»] scaffold0096 (1 HSPs)
scaffold0096 (11-43)||(22375-22407)
[»] scaffold0013 (1 HSPs)
scaffold0013 (11-43)||(241022-241054)


Alignment Details
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 50 - 273
Target Start/End: Original strand, 7801484 - 7801708
Alignment:
Q  50 gctcctcaaatgcccaaacaattttatcaaagtcctggtgcaacgaaggagttgatgtcgttcttagtggatcaaagatcaggaaattctcatatttcag 149  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  7801484 gctcctcaaatgcccaaacaattttatcaaaatcctggtgcaacgaaggagttgatgtcgttcttagtggatcaaagatcaggaaattctcatattttag 7801583  T
Q  150 agagagaatgttgatgtgtcatatgtgatttaatagtttcacattgaatagaagagtatatgttaga-aacatataagtgaggtgacacataccccatta 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||||||    
T  7801584 agagagaatgttgatgtgtcatatgtgatttaatagtttcacattgaatagaatagtagatgttagacaacatataagtgaggtgacacatgccccatta 7801683  T
Q  249 tttataatttttgatgaaaatgtga 273  Q
    |||||||||||| ||||||||||||    
T  7801684 tttataattttttatgaaaatgtga 7801708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 20759114 - 20759076
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  20759114 attattcttgtcaagggagagaattttaggatcacatca 20759076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 36233316 - 36233278
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  36233316 attattcttgtcaagagagataattttaggatcacatca 36233278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 36234032 - 36234070
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  36234032 attattcttgtcaagagagataattttaggatcacatca 36234070  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 24157729 - 24157761
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatc 43  Q
    ||||||||| |||||||||||||||||||||||    
T  24157729 attattcttttcaagagagagaattttaggatc 24157761  T

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Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 5553206 - 5553167
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatcag 50  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  5553206 attattcttgtcaagagagagaattttaggatcacatcag 5553167  T

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Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 25531644 - 25531605
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatcag 50  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  25531644 attattcttgtcaagagagagaattttaggatcacatcag 25531605  T

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Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 5554467 - 5554505
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  5554467 attattcttgtcaagagagagaattttaggatcacatca 5554505  T

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Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 23460210 - 23460172
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  23460210 attattcttgtcaagagagagaattttaggatcacatca 23460172  T

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Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 13041938 - 13041906
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatc 43  Q
    |||||||||||||||||||||||||||||||||    
T  13041938 attattcttgtcaagagagagaattttaggatc 13041906  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 13050015 - 13049983
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatc 43  Q
    |||||||||||||||||||||||||||||||||    
T  13050015 attattcttgtcaagagagagaattttaggatc 13049983  T

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Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 47566484 - 47566446
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  47566484 attattcttgtcaagaaagagaattttaggatcacatca 47566446  T

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Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 738 - 776
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  738 attattcttgtcaagagagagaattttaggatcacatca 776  T

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Target: scaffold0026; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 86591 - 86553
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  86591 attattcttgtcaaaagagagaattttaggatcacatca 86553  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 17665 - 17627
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  17665 attattcttgtcaagagagagaattttaggatcacatca 17627  T

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Target: scaffold0021; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 27196 - 27158
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  27196 attattcttgtcaagagagagaattttaggatcacatca 27158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 761 - 799
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  761 attattcttgtcaagagagagaattttaggatcacatca 799  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 8366115 - 8366077
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  8366115 attattcttgtcaagagagagaattttaggatcacatca 8366077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 17277417 - 17277385
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatc 43  Q
    |||||||||||||||||||||||||||||||||    
T  17277417 attattcttgtcaagagagagaattttaggatc 17277385  T

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Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 17278350 - 17278382
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatc 43  Q
    |||||||||||||||||||||||||||||||||    
T  17278350 attattcttgtcaagagagagaattttaggatc 17278382  T

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Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 17277685 - 17277647
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  17277685 attattcttgtcaagagagagaaatttaggatcacatca 17277647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 9647611 - 9647649
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  9647611 attattcttgtcaagagagagaattttaggatcacatca 9647649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 40998895 - 40998933
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  40998895 attattcttgtcaagagagagaattttaggatcacatca 40998933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 41000755 - 41000793
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  41000755 attattcttgtcaagagagagaattttaggatcacatca 41000793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 7842684 - 7842652
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatc 43  Q
    |||||||||||||||||||||||||||||||||    
T  7842684 attattcttgtcaagagagagaattttaggatc 7842652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 50
Target Start/End: Original strand, 24790191 - 24790230
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatcag 50  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  24790191 attattcttgtcaagagagataattttaggatcacatcag 24790230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 24790130 - 24790092
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  24790130 attattcttgtcaagagagataattttaggatcacatca 24790092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 9596112 - 9596149
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatc 48  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  9596112 attattattgtcaagagagagaattttaggatcacatc 9596149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 9647075 - 9647112
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatc 48  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  9647075 attattattgtcaagagagagaattttaggatcacatc 9647112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 12037095 - 12037133
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  12037095 attattcttgtcaagagagagaattttaggatcacatca 12037133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 12037024 - 12036986
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  12037024 attattcttgttaagagagagaattttaggatcacatca 12036986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 38936725 - 38936687
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  38936725 attattcttgtcaagagagagaattttaggatcacatca 38936687  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 245114 - 245152
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  245114 attattcttgtcaagagagataattttaggatcacatca 245152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 21352763 - 21352801
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  21352763 attattcttttcaagagagagaattttaggatcacatca 21352801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 13518636 - 13518674
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  13518636 attattcttgtcaagagagagaattttaggatcacatca 13518674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 9399295 - 9399333
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  9399295 attattcttgtcaagagagataattttaggatcacatca 9399333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 15018316 - 15018354
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  15018316 attattcttgtcaagagagataattttaggatcacatca 15018354  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 15019956 - 15019994
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  15019956 attattcttgtcaagagagataattttaggatcacatca 15019994  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 39488826 - 39488864
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  39488826 attattcttttcaagagagagaattttaggatcacatca 39488864  T

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Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 46690516 - 46690478
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  46690516 attattcttatcaagagagagaattttaggatcacatca 46690478  T

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Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 13518100 - 13518137
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatc 48  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  13518100 attattattgtcaagagagagaattttaggatcacatc 13518137  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 22299698 - 22299660
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  22299698 attattcttgtcaagagagagaattttaggatcacatca 22299660  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 22300572 - 22300610
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  22300572 attattcttgtcaagagagagaattttaggatcacatca 22300610  T

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Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 24806097 - 24806059
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  24806097 attattcttgtcaagagagagaattttaggatcacatca 24806059  T

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Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 24806961 - 24806999
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  24806961 attattcttgtcaagagagagaattttaggatcacatca 24806999  T

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Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 24808817 - 24808855
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  24808817 attattcttgtcaagagagagaattttaggatcacatca 24808855  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 50
Target Start/End: Original strand, 31974169 - 31974208
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatcag 50  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  31974169 attattcttttcaagagagagaattttaggatcacatcag 31974208  T

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Target: scaffold0359 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 8938 - 8970
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatc 43  Q
    |||||||||||||||||||||||||||||||||    
T  8938 attattcttgtcaagagagagaattttaggatc 8970  T

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Target: scaffold0269 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 2043 - 2081
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  2043 attattcttgtcgagagagagaattttaggatcacatca 2081  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 54864 - 54826
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatcgcatca 49  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  54864 attattcttgtcaagagagagaactttaggatcacatca 54826  T

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Target: scaffold0096 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 22407 - 22375
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatc 43  Q
    |||||||||||||||||||| ||||||||||||    
T  22407 attattcttgtcaagagagataattttaggatc 22375  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 241054 - 241022
Alignment:
Q  11 attattcttgtcaagagagagaattttaggatc 43  Q
    ||||||||||| |||||||||||||||||||||    
T  241054 attattcttgttaagagagagaattttaggatc 241022  T

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