View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6868A_low_137 (Length: 269)
Name: NF6868A_low_137
Description: NF6868A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6868A_low_137 |
 | |
|
| [»] chr7 (15 HSPs) |
| |
|
| [»] scaffold0491 (1 HSPs) |
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|
Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 28 - 269
Target Start/End: Complemental strand, 2338619 - 2338378
Alignment:
| Q |
28 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatttggaagtgggagacgc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||||| ||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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|
| T |
2338619 |
tggtcgagcgcaagggttgagatttaagcatccaaatgctactacggcaacacgaattatgtcaagtaaaaccttcacattatttggaagtgggagacgc |
2338520 |
T |
|
| Q |
128 |
tggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgcca |
227 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2338519 |
tggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagctatgatagtatatcaccagggtgtcttcccattaaagtttcaagtgcca |
2338420 |
T |
|
| Q |
228 |
ctactccaaagctatatacatcacacttttcactcacaacca |
269 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
2338419 |
ctactccaaaactatatacatcgcacttttcactcacaacca |
2338378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 28 - 269
Target Start/End: Complemental strand, 2330763 - 2330522
Alignment:
| Q |
28 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatttggaagtgggagacgc |
127 |
Q |
| |
|
|||||||| || ||||||||||||||||||| ||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2330763 |
tggtcgagcgcaagggttgagatttaagcatccaaatgctactacggcaacacgaattatgtccagtaaaacctttacattatttggaagtgggagacgt |
2330664 |
T |
|
| Q |
128 |
tggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgcca |
227 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2330663 |
tggtctaatacttcacataatttcatcccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcccattaaagtttcaagtgcca |
2330564 |
T |
|
| Q |
228 |
ctactccaaagctatatacatcacacttttcactcacaacca |
269 |
Q |
| |
|
| |||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
2330563 |
caactccaaaactatatacatcgcacttttcactcacaacca |
2330522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 15 - 269
Target Start/End: Complemental strand, 2322162 - 2321908
Alignment:
| Q |
15 |
cacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatttgg |
114 |
Q |
| |
|
|||| |||||| |||||||||| ||| |||||||||||||| |||||||| | | ||||||||||||||||| ||||||||| |||||||||| || |
|
|
| T |
2322162 |
cacatttcattgttggtcgagagaaaggattgagatttaagcaagcaaatgctattgtggcaacacgaattatgtcaagtaaaaccatcacattattcgg |
2322063 |
T |
|
| Q |
115 |
aagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaa |
214 |
Q |
| |
|
|||| | ||||| |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |
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|
| T |
2322062 |
aagtagaagacgttggtctaatacttcacataacttaatgccttgagttgatgctaactgaagtgatgacagtatatcaccagggtgtcttcccattaaa |
2321963 |
T |
|
| Q |
215 |
gtttcaagtgccactactccaaagctatatacatcacacttttcactcacaacca |
269 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2321962 |
gtttcaagtgccacaactccaaagctatatacatcgcacttttcactcacaacca |
2321908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 48 - 269
Target Start/End: Original strand, 3954500 - 3954721
Alignment:
| Q |
48 |
gatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatttggaagtgggagacgctggtctaatacttcacataa |
147 |
Q |
| |
|
|||||||||||||| |||| |||||| ||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3954500 |
gatttaagcatgcagatgctactacaacaacatgaattatgtcaagtaaaactttcacatcatttggaagtgggagacgttggtctaatacttcacataa |
3954599 |
T |
|
| Q |
148 |
tttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgccactactccaaagctatataca |
247 |
Q |
| |
|
||| ||| ||||||| |||| ||| ||||||||||||| ||| || | || | |||||| | |||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
3954600 |
tttgatgtcttgagttgatgttaattgaagtgatgacaatatttcctcgggatatcttcccactaaaatttcaagtgccactactccaaaactatataca |
3954699 |
T |
|
| Q |
248 |
tcacacttttcactcacaacca |
269 |
Q |
| |
|
||||| |||||||| ||||||| |
|
|
| T |
3954700 |
tcacatttttcacttacaacca |
3954721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 28 - 265
Target Start/End: Complemental strand, 1089490 - 1089253
Alignment:
| Q |
28 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatttggaagtgggagacgc |
127 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||| || || |||||| |||||||||| | | | | | | ||| |||||||||| ||||| |
|
|
| T |
1089490 |
tggtcgagaacgaggattgagatttaagcatgcaaatgctaccacggcaacatgaattatgtcatggatagctatttctttacttggaagtggaagacgt |
1089391 |
T |
|
| Q |
128 |
tggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgcca |
227 |
Q |
| |
|
||||||||||||| ||||||||| || | ||| ||||||| | | ||||| ||||||| |||||| ||||||| ||||| | ||||||||||||||||| |
|
|
| T |
1089390 |
tggtctaatacttgacataatttgatactttgtgtcgatgttgattgaagggatgacaatatatcttcagggtgccttccaactaaagtttcaagtgcca |
1089291 |
T |
|
| Q |
228 |
ctactccaaagctatatacatcacacttttcactcaca |
265 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
1089290 |
ctacaccaaaactatatacatcacacttttcactcaca |
1089253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 1549892 - 1550145
Alignment:
| Q |
12 |
acacacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatt |
111 |
Q |
| |
|
||||||| |||||| ||||||||||||||| ||||||||||| ||||||||||| || || ||||| |||||||||| ||| ||| | ||||||| |
|
|
| T |
1549892 |
acacacatttcattgttggtcgagagcgaggattgagatttaaacatgcaaatgctaccacggcaacttgaattatgtcacgtataactatttcattatt |
1549991 |
T |
|
| Q |
112 |
tggaagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctatt |
211 |
Q |
| |
|
||||||||| | ||| ||||||||||||| ||||||||| || | ||| ||||||| | |||||||||| || |||||| ||||||| |||| | | |
|
|
| T |
1549992 |
tggaagtggaatacgttggtctaatacttgacataatttgatactttgtgtcgatggagattgaagtgatgccaatatatcctcagggtgctttccaact |
1550091 |
T |
|
| Q |
212 |
aaagtttcaagtgccactactccaaagctatatacatcacacttttcactcaca |
265 |
Q |
| |
|
|| ||||||||||||||||| ||||| ||||||||||||||||| ||| ||||| |
|
|
| T |
1550092 |
aatgtttcaagtgccactacaccaaaactatatacatcacacttctcattcaca |
1550145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 269
Target Start/End: Original strand, 1556728 - 1556969
Alignment:
| Q |
28 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatttggaagtgggagacgc |
127 |
Q |
| |
|
||||||||| |||| |||| |||||||||||||||||| || || ||||| |||||||||| ||| ||| | |||||||||||||||| |||||| |
|
|
| T |
1556728 |
tggtcgagaatgaggattgatatttaagcatgcaaatgcaaccacgacaacatgaattatgtcacgtataactatgtcattatttggaagtggaagacgc |
1556827 |
T |
|
| Q |
128 |
tggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgcca |
227 |
Q |
| |
|
||||||||||||| ||||| ||| | | | | ||||||| | |||||||||||||||||| ||| ||||| || ||||| | ||||||||||||||| | |
|
|
| T |
1556828 |
tggtctaatacttgacatagtttgacacttcgtgtcgatgttgactgaagtgatgacagtaaatctccaggatgccttccaactaaagtttcaagtgcta |
1556927 |
T |
|
| Q |
228 |
ctactccaaagctatatacatcacacttttcactcacaacca |
269 |
Q |
| |
|
| || ||||| |||||| |||||||||||||| ||||||||| |
|
|
| T |
1556928 |
caacaccaaaactatatgcatcacacttttcattcacaacca |
1556969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 51 - 264
Target Start/End: Complemental strand, 1597220 - 1597007
Alignment:
| Q |
51 |
ttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatttggaagtgggagacgctggtctaatacttcacataattt |
150 |
Q |
| |
|
|||||||||||||||| |||| |||||| ||||||||| ||| ||| || |||||||||||||||| ||||| ||||||||||||| ||||| ||| |
|
|
| T |
1597220 |
ttaagcatgcaaatgcaactatggcaacatgaattatgtgacgtataactatctcattatttggaagtggaagacgttggtctaatacttgacatagttt |
1597121 |
T |
|
| Q |
151 |
catgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgccactactccaaagctatatacatca |
250 |
Q |
| |
|
| | ||| ||||||| | | ||||||||||||| || ||| |||||||| ||||| | |||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
1597120 |
gagactttgtgtcgatgatgattgaagtgatgacaataaatccccagggtgccttccaactaaagtttcaagtgccaccacgccaaagctatatacatca |
1597021 |
T |
|
| Q |
251 |
cacttttcactcac |
264 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
1597020 |
cacttttcattcac |
1597007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 265
Target Start/End: Complemental strand, 1605217 - 1604980
Alignment:
| Q |
28 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttca-cattatttggaagtgggagacg |
126 |
Q |
| |
|
||||||||| ||||| |||| |||||||||||||||||| || || |||||| |||||||||| ||| ||| | || | |||||||||||||| ||||| |
|
|
| T |
1605217 |
tggtcgagaacgaggattgatatttaagcatgcaaatgcaaccacggcaacatgaattatgtcacgtataac-tacatcgttatttggaagtggaagacg |
1605119 |
T |
|
| Q |
127 |
ctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgcc |
226 |
Q |
| |
|
|||||||||||||| ||||| ||| | | ||| ||||| | | ||||||||||||| |||||| ||||||| ||||| | ||||| |||||||||| |
|
|
| T |
1605118 |
ctggtctaatacttgacatagtttgacactttgtgtcgaatttgattgaagtgatgacaatatatcctcagggtgccttccaactaaagcttcaagtgcc |
1605019 |
T |
|
| Q |
227 |
actactccaaagctatatacatcacacttttcactcaca |
265 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||| ||||| |
|
|
| T |
1605018 |
actacaccaaaactatatacatcacacttttcattcaca |
1604980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 269
Target Start/End: Complemental strand, 3853449 - 3853230
Alignment:
| Q |
50 |
tttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatttggaagtgggagacgctggtctaatacttcacataatt |
149 |
Q |
| |
|
||||| ||||||||||| || |||||||| |||| |||| ||| ||||| || ||||||||||| || ||||||| | ||||| |||||||| || || |
|
|
| T |
3853449 |
tttaaacatgcaaatgctacgacagcaacctgaataatgtgaagtgaaaccatctcattatttggacgttggagacgtttgtctagtacttcacgtagtt |
3853350 |
T |
|
| Q |
150 |
tcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgccactactccaaagctatatacatc |
249 |
Q |
| |
|
| ||| ||||||| |||| ||| ||||||||||||| ||| || |||| |||||||| | |||| |||||||||||| ||| ||||| ||||||||||| |
|
|
| T |
3853349 |
tgatgtcttgagttgatgttaattgaagtgatgacaatatttcctcaggatgtcttcccaataaaatttcaagtgccattaccccaaaactatatacatc |
3853250 |
T |
|
| Q |
250 |
acacttttcactcacaacca |
269 |
Q |
| |
|
|||||||||||| ||||||| |
|
|
| T |
3853249 |
acacttttcacttacaacca |
3853230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 265
Target Start/End: Complemental strand, 1106830 - 1106593
Alignment:
| Q |
28 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatttggaagtgggagacgc |
127 |
Q |
| |
|
||||||||| ||||| |||| |||||||||||||||||| || || |||||| |||||||||| ||| ||| | |||||||||||||| |||||| |
|
|
| T |
1106830 |
tggtcgagaacgaggattgatatttaagcatgcaaatgcaaccacggcaacatgaattatgtcacgtataactacgtcgttatttggaagtggaagacgc |
1106731 |
T |
|
| Q |
128 |
tggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgcca |
227 |
Q |
| |
|
||||||||||||| ||||| ||| | | ||| | ||| | | ||||||||||||| |||||| ||||||| ||||| | ||||| ||||||||||| |
|
|
| T |
1106730 |
tggtctaatacttgacatagtttgacactttgtggcgaatttgattgaagtgatgacaatatatcctcagggtgccttccaactaaagcttcaagtgcca |
1106631 |
T |
|
| Q |
228 |
ctactccaaagctatatacatcacacttttcactcaca |
265 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||| ||||| |
|
|
| T |
1106630 |
ctacaccaaaactatatacatcacacttttcattcaca |
1106593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 1563970 - 1564200
Alignment:
| Q |
14 |
acacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatttg |
113 |
Q |
| |
|
||||| |||||| ||||||||| ||||| ||||||||||| | ||||||||| || || |||||| |||||||||| ||| ||| | | ||||||| |
|
|
| T |
1563970 |
acacatttcattgttggtcgagaacgaggattgagatttaaacttgcaaatgctaccacggcaacatgaattatgtcacgtataactatttcgttatttg |
1564069 |
T |
|
| Q |
114 |
gaagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaa |
213 |
Q |
| |
|
||||| | ||||| ||||||||||||| ||||||||| || | ||| ||||||| | | ||||||||||||| |||||| ||||| | ||||| | ||| |
|
|
| T |
1564070 |
gaagtcgaagacgttggtctaatacttgacataatttgatactttgtgtcgatgttgattgaagtgatgacaatatatctccaggtttccttccaactaa |
1564169 |
T |
|
| Q |
214 |
agtttcaagtgccactactccaaagctatat |
244 |
Q |
| |
|
||||||||||| |||||| ||||| |||||| |
|
|
| T |
1564170 |
agtttcaagtgtcactacaccaaaactatat |
1564200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 265
Target Start/End: Original strand, 1540683 - 1540920
Alignment:
| Q |
28 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatttggaagtgggagacgc |
127 |
Q |
| |
|
||||||||| ||||| ||| |||||||||||||||||| || | | |||| |||||||||| ||| ||| | |||||||||||||||| ||||| |
|
|
| T |
1540683 |
tggtcgagaacgaggattgccatttaagcatgcaaatgctaccagggaaacatgaattatgtcacgtataactatgtcattatttggaagtggaagacgt |
1540782 |
T |
|
| Q |
128 |
tggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctattaaagtttcaagtgcca |
227 |
Q |
| |
|
||||||||||||| || || ||| | | | ||||||| | | ||||||||||||| || ||| |||||||| ||||| | |||||||||||||| || |
|
|
| T |
1540783 |
tggtctaatacttgacgtagtttgacacttcttgtcgatgttgattgaagtgatgacaataaatccccagggtgccttccaactaaagtttcaagtgtca |
1540882 |
T |
|
| Q |
228 |
ctactccaaagctatatacatcacacttttcactcaca |
265 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||| ||||| |
|
|
| T |
1540883 |
ctacaccaaaactatatacatcacacttttcattcaca |
1540920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 2335308 - 2335141
Alignment:
| Q |
28 |
tggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatttggaagtgggagacgc |
127 |
Q |
| |
|
||||| ||||| ||| ||||||||||||||||||||||| || | |||||||||||||||| ||||||||| ||||||||||||||| | || || | |
|
|
| T |
2335308 |
tggtcaagagcaaggattgagatttaagcatgcaaatgctacaatgacaacacgaattatgtcaagtaaaaccatcacattatttggaaataggggatgt |
2335209 |
T |
|
| Q |
128 |
tggtctaatacttcaca---taatttcatgccttgagtcgatgctaactgaagtgatgacagtatatc |
192 |
Q |
| |
|
|| |||||||||||||| |||||||||||| |||| ||||| || ||||||||||||| |||||| |
|
|
| T |
2335208 |
tgttctaatacttcacataataatttcatgccgagagttgatgcaaattgaagtgatgacaatatatc |
2335141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 2326455 - 2326313
Alignment:
| Q |
12 |
acacacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattat--gtcgagtaaaaccttcacatta |
109 |
Q |
| |
|
||||||| |||||| |||||||||| ||| |||||||||||| |||||||||| |||| |||||||||||||| ||| ||||||||| ||| |||| |
|
|
| T |
2326455 |
acacacatttcattgttggtcgagagaaaggattgagatttaagtatgcaaatgctactaaggcaacacgaattatatgtcaagtaaaaccatcatatta |
2326356 |
T |
|
| Q |
110 |
tttggaagtgggagacgctggtctaatacttcacataatttca |
152 |
Q |
| |
|
|| ||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
2326355 |
ttcagaagtgggagacgttggtctaatacttcacataacttca |
2326313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 96; Significance: 4e-47; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 259
Target Start/End: Original strand, 18738547 - 18738794
Alignment:
| Q |
12 |
acacacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatt |
111 |
Q |
| |
|
||||||| |||||| ||||||||| ||||| |||| |||||||||||||||||| || || ||| || |||||||||| ||| ||| | ||||||| |
|
|
| T |
18738547 |
acacacatttcattgttggtcgagaacgaggattgacatttaagcatgcaaatgctaccacggcagcatgaattatgtcacgtataactatgtcattatt |
18738646 |
T |
|
| Q |
112 |
tggaagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctatt |
211 |
Q |
| |
|
||||||||| ||||| ||||||||||||| ||||| ||| | | ||| ||||||| | | ||||||||||||| || ||| |||||||| ||||| | | |
|
|
| T |
18738647 |
tggaagtggaagacggtggtctaatacttgacatagtttgagactttgtgtcgatgttgattgaagtgatgacaataaatccccagggtgccttccaact |
18738746 |
T |
|
| Q |
212 |
aaagtttcaagtgccactactccaaagctatatacatcacacttttca |
259 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
18738747 |
aaagtttcaagtgccactacaccaaaactatatacatcacacttttca |
18738794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 259
Target Start/End: Original strand, 18743511 - 18743758
Alignment:
| Q |
12 |
acacacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatt |
111 |
Q |
| |
|
||||||| |||||| ||||||||| ||||| |||| |||||||||||||||||| || || ||| || |||||||||| ||| ||| | ||||||| |
|
|
| T |
18743511 |
acacacatttcattgttggtcgagaacgaggattgacatttaagcatgcaaatgctaccacggcagcatgaattatgtcacgtataactatgtcattatt |
18743610 |
T |
|
| Q |
112 |
tggaagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctatt |
211 |
Q |
| |
|
||||||||| ||||| ||||||||||||| ||||| ||| | | ||| ||||||| | | ||||||||||||| || ||| |||||||| ||||| | | |
|
|
| T |
18743611 |
tggaagtggaagacggtggtctaatacttgacatagtttgagactttgtgtcgatgttgattgaagtgatgacaataaatccccagggtgccttccaact |
18743710 |
T |
|
| Q |
212 |
aaagtttcaagtgccactactccaaagctatatacatcacacttttca |
259 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
18743711 |
aaagtttcaagtgccactacaccaaaactatatacatcacacttttca |
18743758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 18748478 - 18748731
Alignment:
| Q |
12 |
acacacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatt |
111 |
Q |
| |
|
||||||| |||||| ||||||||| ||||| |||| ||||||||||||||| || || || |||| | ||||||||| ||| |||| | ||||||| |
|
|
| T |
18748478 |
acacacatttcattgttggtcgagaacgaggattgacatttaagcatgcaaaggcaacaacggcaaaatgaattatgttacgtataaccatttcattatt |
18748577 |
T |
|
| Q |
112 |
tggaagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctatt |
211 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||| ||| | | ||| ||||||| | | ||||||||||||| || ||| |||||||| ||||| | |
|
|
| T |
18748578 |
tggaagtggaagacgctggtctaatacttgacatagtttgacactttgtgtcgatgttgattgaagtgatgacaataaatccccagggtgccttccagct |
18748677 |
T |
|
| Q |
212 |
aaagtttcaagtgccactactccaaagctatatacatcacacttttcactcaca |
265 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |
|
|
| T |
18748678 |
aaagtttcaagtgccactacaccaaaactatatacatcacacttttcattcaca |
18748731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 18722826 - 18723079
Alignment:
| Q |
12 |
acacacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatt |
111 |
Q |
| |
|
||||||| |||||| ||||||||| ||||| |||| ||||||||||||||| || || || |||| | ||||||||| ||| |||| | ||||||| |
|
|
| T |
18722826 |
acacacatttcattgttggtcgagaacgaggattgacatttaagcatgcaaaggcaacaacggcaaaatgaattatgttacgtataaccatttcattatt |
18722925 |
T |
|
| Q |
112 |
tggaagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctatt |
211 |
Q |
| |
|
||||||||| ||||||||||||||||||| | ||| ||| | | ||| || |||| | | ||||||||||||| || ||| |||||||| ||||| | |
|
|
| T |
18722926 |
tggaagtggaagacgctggtctaatacttgatatagtttgacactttgtgttgatgttgattgaagtgatgacaataaatccccagggtgccttccagct |
18723025 |
T |
|
| Q |
212 |
aaagtttcaagtgccactactccaaagctatatacatcacacttttcactcaca |
265 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |
|
|
| T |
18723026 |
aaagtttcaagtgccactacaccaaaactatatacatcacacttttcattcaca |
18723079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0491 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0491
Description:
Target: scaffold0491; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 5319 - 5572
Alignment:
| Q |
12 |
acacacacttcatttctggtcgagagcgagggttgagatttaagcatgcaaatgcgactacagcaacacgaattatgtcgagtaaaaccttcacattatt |
111 |
Q |
| |
|
||||||| |||||| ||||||||| ||||| |||| ||||||||||||||| || || || |||| | ||||||||| ||| |||| | ||||||| |
|
|
| T |
5319 |
acacacatttcattgttggtcgagaacgaggattgacatttaagcatgcaaaggcaacaacggcaaaatgaattatgttacgtataaccatttcattatt |
5418 |
T |
|
| Q |
112 |
tggaagtgggagacgctggtctaatacttcacataatttcatgccttgagtcgatgctaactgaagtgatgacagtatatcaccagggtgtcttcctatt |
211 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||| ||| | | ||| ||||||| | | ||||||||||||| || ||| |||||||| ||||| | |
|
|
| T |
5419 |
tggaagtggaagacgctggtctaatacttgacatagtttgacactttgtgtcgatgttgattgaagtgatgacaataaatccccagggtgccttccagct |
5518 |
T |
|
| Q |
212 |
aaagtttcaagtgccactactccaaagctatatacatcacacttttcactcaca |
265 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |
|
|
| T |
5519 |
aaagtttcaagtgccactacaccaaaactatatacatcacacttttcattcaca |
5572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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