View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6868A_low_226 (Length: 244)
Name: NF6868A_low_226
Description: NF6868A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6868A_low_226 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 9443524 - 9443303
Alignment:
| Q |
1 |
aaaaaattaatcatggctacatcagtgtttgttcgtatgtttcccaactctctgatttccggcttcgcaaaaatcatggtagtataccaggttaacaaac |
100 |
Q |
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| T |
9443524 |
aaaaacttaatcatggctacatcagtgtttgttcgtatgtttcccaactctctgatttccggcttcgcaaaaatcatggtagtataccaggtttacaaac |
9443425 |
T |
|
| Q |
101 |
atgcgctaaaactaaacgataaatttaagaataaaaatcaatggtagagacaaaaactataagttctagtttcgagttagaatcaactttggatgcaatt |
200 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
9443424 |
atgcgctaaaactaaaccataaatttaagaataaaaatcaatggtagagacaaaaactataagttctagtttcgagttagaatcaactttggaagcaatt |
9443325 |
T |
|
| Q |
201 |
ttccataaaatcacatatctta |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
9443324 |
ttccataaaatcacatatctta |
9443303 |
T |
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