View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6868A_low_234 (Length: 242)

Name: NF6868A_low_234
Description: NF6868A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6868A_low_234
NF6868A_low_234
[»] chr4 (13 HSPs)
chr4 (108-210)||(15227683-15227785)
chr4 (108-210)||(15285284-15285386)
chr4 (108-207)||(1900073-1900172)
chr4 (108-206)||(14235884-14235982)
chr4 (108-177)||(24460961-24461030)
chr4 (110-210)||(14664828-14664928)
chr4 (110-210)||(17013810-17013910)
chr4 (110-206)||(15391693-15391790)
chr4 (110-207)||(24592672-24592769)
chr4 (113-196)||(24112489-24112572)
chr4 (113-196)||(34189321-34189404)
chr4 (113-207)||(54833203-54833297)
chr4 (110-207)||(30753555-30753652)
[»] chr2 (17 HSPs)
chr2 (108-210)||(19456766-19456868)
chr2 (108-207)||(21703509-21703608)
chr2 (108-207)||(27434792-27434891)
chr2 (108-177)||(31891673-31891742)
chr2 (108-177)||(3784481-3784550)
chr2 (108-177)||(16163426-16163495)
chr2 (108-177)||(27118515-27118584)
chr2 (108-177)||(34156838-34156907)
chr2 (108-177)||(34303648-34303717)
chr2 (110-207)||(12655336-12655433)
chr2 (110-207)||(23128916-23129013)
chr2 (110-207)||(20837712-20837809)
chr2 (108-197)||(27392797-27392886)
chr2 (110-207)||(28882008-28882105)
chr2 (110-207)||(13936894-13936991)
chr2 (110-207)||(34279243-34279340)
chr2 (110-207)||(12716955-12717052)
[»] chr1 (3 HSPs)
chr1 (108-207)||(20460905-20461004)
chr1 (108-207)||(16208384-16208483)
chr1 (108-177)||(20340691-20340760)
[»] chr3 (26 HSPs)
chr3 (108-206)||(18530157-18530255)
chr3 (108-207)||(16626903-16627002)
chr3 (116-207)||(15893114-15893205)
chr3 (108-177)||(5652179-5652248)
chr3 (108-177)||(5713016-5713085)
chr3 (108-177)||(5723926-5723995)
chr3 (108-177)||(5757482-5757551)
chr3 (108-177)||(5768373-5768442)
chr3 (108-177)||(17994181-17994250)
chr3 (110-177)||(4625736-4625803)
chr3 (108-207)||(8301664-8301763)
chr3 (110-207)||(8295734-8295831)
chr3 (108-207)||(18051021-18051120)
chr3 (110-207)||(4797055-4797152)
chr3 (110-207)||(15741484-15741581)
chr3 (110-207)||(18330433-18330530)
chr3 (119-199)||(22387986-22388066)
chr3 (113-207)||(8211500-8211594)
chr3 (110-207)||(20065805-20065902)
chr3 (110-207)||(35880525-35880622)
chr3 (113-196)||(4892983-4893066)
chr3 (113-207)||(29149160-29149254)
chr3 (110-207)||(4721390-4721487)
chr3 (118-207)||(6192075-6192164)
chr3 (110-206)||(7072972-7073068)
chr3 (113-196)||(32438927-32439010)
[»] chr7 (11 HSPs)
chr7 (108-207)||(16041125-16041224)
chr7 (110-207)||(16450242-16450339)
chr7 (108-207)||(16503625-16503724)
chr7 (108-207)||(16518661-16518760)
chr7 (108-177)||(31088706-31088775)
chr7 (108-177)||(45733292-45733361)
chr7 (110-207)||(2154372-2154469)
chr7 (113-199)||(5159329-5159415)
chr7 (110-207)||(5127791-5127888)
chr7 (110-207)||(10917112-10917209)
chr7 (110-207)||(11425023-11425120)
[»] scaffold0124 (2 HSPs)
scaffold0124 (108-207)||(20210-20309)
scaffold0124 (110-207)||(30251-30348)
[»] chr5 (20 HSPs)
chr5 (108-199)||(22888288-22888379)
chr5 (108-207)||(25198839-25198938)
chr5 (108-205)||(23892015-23892112)
chr5 (108-177)||(11325634-11325703)
chr5 (108-177)||(13184901-13184970)
chr5 (108-177)||(13440747-13440816)
chr5 (108-177)||(33877087-33877156)
chr5 (108-207)||(24688413-24688512)
chr5 (110-207)||(11549161-11549258)
chr5 (110-207)||(22999372-22999469)
chr5 (110-207)||(23718246-23718343)
chr5 (110-207)||(23752708-23752805)
chr5 (110-210)||(33777291-33777391)
chr5 (113-196)||(33292346-33292429)
chr5 (108-162)||(24969876-24969930)
chr5 (110-207)||(41674516-41674613)
chr5 (110-204)||(30934446-30934540)
chr5 (110-207)||(9548801-9548898)
chr5 (110-207)||(24681244-24681341)
chr5 (110-207)||(24723771-24723868)
[»] chr6 (16 HSPs)
chr6 (108-206)||(22477575-22477673)
chr6 (108-177)||(28162485-28162554)
chr6 (108-177)||(13522372-13522441)
chr6 (108-177)||(33374555-33374624)
chr6 (110-177)||(8892611-8892678)
chr6 (108-177)||(8903844-8903913)
chr6 (110-210)||(13299255-13299355)
chr6 (108-207)||(24863512-24863611)
chr6 (110-207)||(15424621-15424718)
chr6 (110-207)||(20160499-20160596)
chr6 (110-207)||(22172235-22172332)
chr6 (110-207)||(26988796-26988893)
chr6 (110-207)||(26999868-26999965)
chr6 (110-207)||(24304922-24305019)
chr6 (110-207)||(26918175-26918272)
chr6 (110-207)||(16749649-16749746)
[»] chr8 (13 HSPs)
chr8 (108-207)||(16283247-16283346)
chr8 (108-177)||(44562932-44563001)
chr8 (108-177)||(19659354-19659423)
chr8 (108-177)||(9354453-9354522)
chr8 (110-206)||(22081192-22081288)
chr8 (108-207)||(19687896-19687995)
chr8 (110-207)||(16277352-16277449)
chr8 (116-207)||(2137585-2137676)
chr8 (110-207)||(27609225-27609322)
chr8 (110-207)||(14557425-14557522)
chr8 (113-207)||(19286263-19286357)
chr8 (113-207)||(31490073-31490167)
chr8 (110-206)||(19674237-19674333)
[»] scaffold0089 (3 HSPs)
scaffold0089 (108-207)||(29561-29660)
scaffold0089 (108-207)||(40428-40527)
scaffold0089 (110-199)||(47346-47435)
[»] scaffold0260 (1 HSPs)
scaffold0260 (108-177)||(3014-3083)
[»] scaffold0109 (1 HSPs)
scaffold0109 (108-206)||(21366-21464)
[»] scaffold0143 (1 HSPs)
scaffold0143 (110-207)||(27090-27187)
[»] scaffold0029 (1 HSPs)
scaffold0029 (110-207)||(491-588)


Alignment Details
Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 15227785 - 15227683
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15227785 agaatggtggaaagaagggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgacc 15227686  T
Q  208 agc 210  Q
    |||    
T  15227685 agc 15227683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 15285284 - 15285386
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15285284 agaatggtggaaagaaaggatgctgagagtattgcgcatatgggtacaatggaggtaactgggcagcattaataggggcaacagtagccatggattgacc 15285383  T
Q  208 agc 210  Q
    |||    
T  15285384 agc 15285386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 1900172 - 1900073
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1900172 agaatggtggaaagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgacc 1900073  T

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Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 14235884 - 14235982
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgac 206  Q
    |||||||||| ||||||||||||||||||||||||  |||| |||||| | |||||||||| |||||||||||||||| |||||| |||||| ||||||    
T  14235884 agaatggtgggaagaaaggatgctgagagtattgcatatactggtacggcagaggtaactgagcagcattaataggggtaacagtggccatggattgac 14235982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 24460961 - 24461030
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  24460961 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 24461030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 14664928 - 14664828
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgaccag 209  Q
    ||||| |||||||||||||||||||| ||  | ||||| ||||| |||||||| |  ||||||||||| ||||| ||||||||||||||| |||||||||    
T  14664928 aatggcggaaagaaaggatgctgagaatacggtgcatatgggtatgacggaggcatttgggcagcattgataggagcaacagtagccatggattgaccag 14664829  T
Q  210 c 210  Q
    |    
T  14664828 c 14664828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 17013910 - 17013810
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgaccag 209  Q
    ||||| |||||||||||||||||||| ||  ||||||| ||||| || ||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||||    
T  17013910 aatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgaaggaggcatttgggctgcattgataggagcaacagtagccatggattgaccag 17013811  T
Q  210 c 210  Q
    |    
T  17013810 c 17013810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 15391693 - 15391790
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggc-aacagtagccatgaattgac 206  Q
    |||||||| ||||||||||||||||||||||||   ||| | |||| |||||||| ||| ||| |||| || ||||| ||||||||||||| ||||||    
T  15391693 aatggtgggaagaaaggatgctgagagtattgcatgtactgatacggcggaggtagctgagcaacattgatgggggcaaacagtagccatggattgac 15391790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 24592672 - 24592769
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  24592672 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgacc 24592769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 196
Target Start/End: Complemental strand, 24112572 - 24112489
Alignment:
Q  113 ggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagcc 196  Q
    ||||| ||||| ||||||||||||||  | ||||| ||||| ||||| || ||||| |||||||| | ||| ||||||||||||    
T  24112572 ggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgacaggagcaacagtagcc 24112489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 196
Target Start/End: Original strand, 34189321 - 34189404
Alignment:
Q  113 ggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagcc 196  Q
    ||||| ||||| ||||||||||||||  | ||||| ||||| ||||| || ||||| |||||||| ||||| || |||||||||    
T  34189321 ggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgataggagcgacagtagcc 34189404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 54833297 - 54833203
Alignment:
Q  113 ggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| ||||| ||||||||||||||  || |||| ||||| |||||||| |  || || ||||| ||||| |||||||| |||||| |||||||    
T  54833297 ggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtggccatggattgacc 54833203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 30753652 - 30753555
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| || ||||||||||||||||| ||  ||  ||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  30753652 aatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccatggattgacc 30753555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 19456766 - 19456868
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19456766 agaatggtggaaagaaaggatgctgaaagtattgcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgacc 19456865  T
Q  208 agc 210  Q
    |||    
T  19456866 agc 19456868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 21703509 - 21703608
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  21703509 agaatggtggaaagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactaggcagcattaataggggcaacagtagccatggattgacc 21703608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 27434792 - 27434891
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||||||| |  ||||||||||||||||| ||||||||||||||| |||||||    
T  27434792 agaatggtggaaagaaaggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagcaacagtagccatggattgacc 27434891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 31891673 - 31891742
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  31891673 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 31891742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 3784550 - 3784481
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  3784550 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 3784481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 16163495 - 16163426
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  16163495 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 16163426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 27118584 - 27118515
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  27118584 agaatggtggaaagaagggatgctgagagtattgcgcatgcgggtacgacggaggtagctgagcagcatt 27118515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 34156907 - 34156838
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  34156907 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 34156838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 34303648 - 34303717
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  34303648 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 34303717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 12655433 - 12655336
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  ||||||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  12655433 aatggcggaaagaaaggatgctgagaatacggcgcatatgggtaggacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 12655336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 23128916 - 23129013
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  ||||||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  23128916 aatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 23129013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 20837809 - 20837712
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  ||||||| ||||| |||||| | |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  20837809 aatggcggaaagaaaggatgctgagaatacggcgcatatgggtaggacggatgcatttgggctgcattgataggagcaacagtagccatggattgacc 20837712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 27392886 - 27392797
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagcca 197  Q
    |||||||||| ||||||||||||||||||||||||   ||| ||||||  ||||||| ||| |||||||  || ||||||||||||||||    
T  27392886 agaatggtgggaagaaaggatgctgagagtattgcatgtactggtacggtggaggtagctgagcagcatcgatgggggcaacagtagcca 27392797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 28882105 - 28882008
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  28882105 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 28882008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 13936894 - 13936991
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  ||  ||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  13936894 aatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgacc 13936991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 34279340 - 34279243
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  ||  ||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  34279340 aatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgacc 34279243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 12716955 - 12717052
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| || ||||||||||||||||| ||  ||  ||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  12716955 aatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccatggattgacc 12717052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 20461004 - 20460905
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  20461004 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacggcggaggtaactgggcagcattaataggggcaatagtagccatggattgacc 20460905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 16208384 - 16208483
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||| ||||||||||||||||||||||||   ||| | |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16208384 agaatggtgggaagaaaggatgctgagagtattgcatgtactgatacggcggaggtaactgggcagcattaataggggcaacagtagccatggattgacc 16208483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 20340691 - 20340760
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  20340691 agaatggtggaaagaagggatgctgagagtattgcgcgtacgggtacgacggaggtagctgagcagcatt 20340760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 8e-42; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 18530255 - 18530157
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgac 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  18530255 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgatggaggtaactgggcagcattaataggggtaacagtagccatggattgac 18530157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 16626903 - 16627002
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16626903 agaacggtggaaagaagggatgctgagagtattgtgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgacc 16627002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 207
Target Start/End: Original strand, 15893114 - 15893205
Alignment:
Q  116 ggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||||||||||||||||  ||||||| |||||||||||||| |  ||||||||||| ||||| ||||||||||||||| |||||||    
T  15893114 ggaaagaaaggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattgataggagcaacagtagccatggattgacc 15893205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 5652248 - 5652179
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  5652248 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5652179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 5713085 - 5713016
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  5713085 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5713016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 5723995 - 5723926
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  5723995 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5723926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 5757482 - 5757551
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  5757482 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5757551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 5768373 - 5768442
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  5768373 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 5768442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 17994181 - 17994250
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  17994181 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 17994250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 4625803 - 4625736
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  4625803 aatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 4625736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 8301664 - 8301763
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||||| |||||||||||||||||||| ||  ||||||| | |||||||||||| |  ||||||||||| ||||| |||||| |||||||| |||||||    
T  8301664 agaatggcggaaagaaaggatgctgagaatacggcgcatatgagtacgacggaggcatttgggcagcattgataggagcaacaatagccatggattgacc 8301763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 8295831 - 8295734
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  ||||||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  8295831 aatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 8295734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 18051120 - 18051021
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||||| |||||||||||||| ||||| ||  ||||||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  18051120 agaatggcggaaagaaaggatgttgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 18051021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 4797055 - 4797152
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  4797055 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 4797152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 15741484 - 15741581
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  15741484 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 15741581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 18330530 - 18330433
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||||||||||||||||||| ||  || |||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  18330530 aatggtggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgacc 18330433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 22387986 - 22388066
Alignment:
Q  119 aagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatg 199  Q
    ||||| ||||||||||||||| | ||||| ||||| ||||| || ||||| |||||||| ||||| |||||||||||||||    
T  22387986 aagaacggatgctgagagtatggtgcataagggtaggacgggggaaactgagcagcattgataggagcaacagtagccatg 22388066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 8211594 - 8211500
Alignment:
Q  113 ggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| ||||| ||||||||||||||  ||||||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  8211594 ggtgggaagaacggatgctgagagtacggcgcatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgacc 8211500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 20065902 - 20065805
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  ||||| ||||| ||||| |||||||| |||||| |||||||    
T  20065902 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtggccatggattgacc 20065805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 35880622 - 35880525
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  35880622 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgacc 35880525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 196
Target Start/End: Complemental strand, 4893066 - 4892983
Alignment:
Q  113 ggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagcc 196  Q
    ||||| ||||| ||||||||||||||  | ||||| ||||| ||||| || ||||| |||||||| ||||| ||||||||||||    
T  4893066 ggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgataggagcaacagtagcc 4892983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 29149160 - 29149254
Alignment:
Q  113 ggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| ||||||||||||||||| ||  || |||| ||||| |||||||| |  ||||| ||||| ||||| |||| |||||||||| |||||||    
T  29149160 ggtgggaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaatagtagccatggattgacc 29149254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 4721487 - 4721390
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| ||||||||| |||||||||| ||  || |||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  4721487 aatggcggaaagaaaagatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgacc 4721390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 207
Target Start/End: Complemental strand, 6192164 - 6192075
Alignment:
Q  118 aaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||||||||||| ||  || |||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  6192164 aaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgacc 6192075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 7073068 - 7072972
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgac 206  Q
    ||||| |||||||||||||||||||| ||  ||  ||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| ||||||    
T  7073068 aatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgac 7072972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 196
Target Start/End: Complemental strand, 32439010 - 32438927
Alignment:
Q  113 ggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagcc 196  Q
    ||||| ||||| ||||||||||||||  | ||||| ||||| ||||| || ||||| |||||||| | ||| ||||||||||||    
T  32439010 ggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgacaggagcaacagtagcc 32438927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 16041224 - 16041125
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16041224 agaatggtggaaagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgacc 16041125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 16450242 - 16450339
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  16450242 aatggtggaaagaagggatgctgagagtactgcgcgtacgggtacgacggaggtaactgggcagcattaataggggcaacagtagctatggattgacc 16450339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 16503625 - 16503724
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||||| |||||||||||||||||||||||  ||||||| ||||| |||||||| |  ||||||||||||||||| ||||||||||||||| |||||||    
T  16503625 agaatggcggaaagaaaggatgctgagagtacggcgcatatgggtatgacggaggcatttgggcagcattaataggagcaacagtagccatggattgacc 16503724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 16518661 - 16518760
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||||| |||||||||||||||||||||||  ||||||| ||||| |||||||| |  ||||||||||||||||| ||||||||||||||| |||||||    
T  16518661 agaatggcggaaagaaaggatgctgagagtacggcgcatatgggtatgacggaggcatttgggcagcattaataggagcaacagtagccatggattgacc 16518760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 31088706 - 31088775
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  31088706 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 31088775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 45733361 - 45733292
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  45733361 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 45733292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 2154469 - 2154372
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  2154469 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 2154372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 5159415 - 5159329
Alignment:
Q  113 ggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatg 199  Q
    ||||| ||||| ||||||||||||||  | ||||| ||||| ||||| || ||||| |||||||| ||||| |||||||||||||||    
T  5159415 ggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgataggagcaacagtagccatg 5159329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 5127888 - 5127791
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  5127888 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgacc 5127791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 10917112 - 10917209
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||| ||||||||||| ||  || |||| ||||| |||| ||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  10917112 aatggcggaaagaagggatgctgagaatacggcacatatgggtatgacgaaggcatttgggctgcattgataggagcaacagtagccatggattgacc 10917209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 11425023 - 11425120
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  ||  ||| ||||| |||||||| |  |||||  |||| ||||| ||||||||||||||| |||||||    
T  11425023 aatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgggctacattgataggagcaacagtagccatggattgacc 11425120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 20309 - 20210
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||| ||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20309 agaatgatggaaagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgacc 20210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 30348 - 30251
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||| ||||||||||| ||  ||||||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  30348 aatggcggaaagaagggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 30251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 22888379 - 22888288
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatg 199  Q
    |||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22888379 agaatggtggaaagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatg 22888288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 25198938 - 25198839
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||||||| || |||| |||||||||||| ||||||||||||||| |||||||    
T  25198938 agaatggtggaaagaaaggatgctgagagtacggcgcatatgggtacgacggaggcaattgggaagcattaataggagcaacagtagccatggattgacc 25198839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 23892112 - 23892015
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattga 205  Q
    |||||| ||||||||||||||||||||||||  ||||||| |||||||||||||| |  ||||||||||||||||| ||||||||||||||| |||||    
T  23892112 agaatgttggaaagaaaggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagcaacagtagccatggattga 23892015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 11325703 - 11325634
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  11325703 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 11325634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 13184901 - 13184970
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  13184901 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 13184970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 13440747 - 13440816
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  13440747 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 13440816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 33877156 - 33877087
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  33877156 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 33877087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 24688413 - 24688512
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||||| |||||||||||||| ||||| ||  ||||||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  24688413 agaatggcggaaagaaaggatgttgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 24688512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 11549258 - 11549161
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||||||||||||||||||||| || ||  || |||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  11549258 aatggtggaaagaaaggatgctgtgaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 11549161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 22999372 - 22999469
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  22999372 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 22999469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 23718246 - 23718343
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  23718246 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 23718343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 23752708 - 23752805
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  23752708 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 23752805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 33777391 - 33777291
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgaccag 209  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||||    
T  33777391 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgaccag 33777292  T
Q  210 c 210  Q
    |    
T  33777291 c 33777291  T

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Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 196
Target Start/End: Complemental strand, 33292429 - 33292346
Alignment:
Q  113 ggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagcc 196  Q
    ||||| ||||| ||||||||||||||  | ||||| ||||| ||||| || ||||| |||||||| ||||| ||||||||||||    
T  33292429 ggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgataggagcaacagtagcc 33292346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 24969930 - 24969876
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggagg 162  Q
    ||||||| |||||||||||||||||||| ||  ||||||| ||||||||||||||    
T  24969930 agaatggcggaaagaaaggatgctgagaatacggcgcatatgggtacgacggagg 24969876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 41674613 - 41674516
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||  ||  || |||| ||||| |||||||| |  ||||| | ||| ||||| ||||||||||||||| |||||||    
T  41674613 aatggcggaaagaaaggatgctgagcatacggcacatatgggtatgacggaggcatttgggctgtattgataggagcaacagtagccatggattgacc 41674516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 204
Target Start/End: Complemental strand, 30934540 - 30934446
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattg 204  Q
    ||||| |||||||| ||||||||||| ||  || |||| ||||| |||||||| |  ||||| ||||| ||||| |||||||||| |||| ||||    
T  30934540 aatggcggaaagaagggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagtcatggattg 30934446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 9548801 - 9548898
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  ||  ||| ||||| |||||||| |  ||||| | ||| ||||| |||||||| |||||| |||||||    
T  9548801 aatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgtattgataggagcaacagtggccatggattgacc 9548898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 24681341 - 24681244
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| || ||||||||||||||||| ||  ||  ||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  24681341 aatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccatggattgacc 24681244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 24723868 - 24723771
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| || ||||||||||||||||| ||  ||  ||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  24723868 aatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccatggattgacc 24723771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 22477575 - 22477673
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgac 206  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  22477575 agaatggtggaaagaagggatgctgagagtactgcgcatacgggtacgacagaggtaattgggcagcattaattggggcaacagtagccatggattgac 22477673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 28162554 - 28162485
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  28162554 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgatggaggtagctgagcagcatt 28162485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 13522372 - 13522441
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  13522372 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 13522441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 33374555 - 33374624
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  33374555 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 33374624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 8892611 - 8892678
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  8892611 aatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 8892678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 8903844 - 8903913
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  8903844 agaatggtggaaagaagagatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 8903913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 13299255 - 13299355
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgaccag 209  Q
    ||||| |||||||||||||||||||| ||  ||||||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||||    
T  13299255 aatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgaccag 13299354  T
Q  210 c 210  Q
    |    
T  13299355 c 13299355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 24863611 - 24863512
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||||| |||||||||||||||||||| ||  ||||||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  24863611 agaatggcggaaagaaaggatgctgagaatacggcgcatatgggtaggacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 24863512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 15424621 - 15424718
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  ||||||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  15424621 aatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 15424718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 20160596 - 20160499
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||||||| |||||||||| |||||||| || ||| || |||| |  |||||||| || | |||||||| ||||||||||||||||||| |||||||    
T  20160596 aatggtggatagaaaggatgttgagagtaatgtgcaaacaggtatggtggaggtaattgagtagcattaacaggggcaacagtagccatggattgacc 20160499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 22172235 - 22172332
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||||||| |||||||||| |||||||| || ||| || |||| |  |||||||| || | |||||||| ||||||||||||||||||| |||||||    
T  22172235 aatggtggatagaaaggatgttgagagtaatgtgcaaacaggtatggtggaggtaattgagtagcattaacaggggcaacagtagccatggattgacc 22172332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 26988893 - 26988796
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  26988893 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 26988796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 26999965 - 26999868
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  26999965 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 26999868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 24304922 - 24305019
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||| ||||||||||| ||  || |||| ||||| |||||||| |  ||||||||||| ||||| || |||||||||||| |||||||    
T  24304922 aatggcggaaagaagggatgctgagaatacggcacatatgggtatgacggaggcatttgggcagcattgataggagcgacagtagccatggattgacc 24305019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 26918272 - 26918175
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  26918272 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgacc 26918175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 16749746 - 16749649
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||  |  || || || || ||||| ||||||||||||||| |||||||    
T  16749746 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggagacatttgagctgcgttgataggagcaacagtagccatggattgacc 16749649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 16283346 - 16283247
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||||| |||||||||||||||||||||||  ||||||| |||||||||||||| |  ||||||||||||||||| ||||||||||||||| |||||||    
T  16283346 agaatggcggaaagaaaggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagcaacagtagccatggattgacc 16283247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 44563001 - 44562932
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  44563001 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 44562932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 19659354 - 19659423
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  19659354 agaatggtggaaagaagggatgctgagagtattgcgcatacgggtacgacggaggtagctgagcagcatt 19659423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 9354522 - 9354453
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  9354522 agaatggtggaaagaagggatgctgagagtattgcgcatacgtgtacgacggaggtagctgagcagcatt 9354453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 22081192 - 22081288
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgac 206  Q
    |||||||| ||||||||||||||||||||||||   ||| | |||| |||||||| ||| |||||||| || |||||||||||||||||| ||||||    
T  22081192 aatggtgggaagaaaggatgctgagagtattgcatgtactgatacggcggaggtagctgagcagcattgatgggggcaacagtagccatggattgac 22081288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 19687995 - 19687896
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||||| ||||||||||||||||| || ||  ||||||| ||||| |||||||| |  ||||||||||| ||||| ||||||||||||||| |||||||    
T  19687995 agaatggcggaaagaaaggatgctgggaatacggcgcatatgggtatgacggaggcatttgggcagcattgataggagcaacagtagccatggattgacc 19687896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 16277449 - 16277352
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  ||||||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  16277449 aatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 16277352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 207
Target Start/End: Original strand, 2137585 - 2137676
Alignment:
Q  116 ggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||||||||||||||| ||  ||||||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  2137585 ggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 2137676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 27609225 - 27609322
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||   | |||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  27609225 aatggcggaaagaaaggatgctgagaatacgacacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 27609322  T

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Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 14557522 - 14557425
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||| ||||||||||| ||  || |||| ||||| |||||||| |  ||||| ||||| ||||| || |||||||||||| |||||||    
T  14557522 aatggcggaaagaagggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcgacagtagccatggattgacc 14557425  T

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Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 19286357 - 19286263
Alignment:
Q  113 ggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| ||||| ||||||||||||||  || |||| ||||| |||||||| |  || || ||||| ||||| |||||||| |||||| |||||||    
T  19286357 ggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtggccatggattgacc 19286263  T

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Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 31490073 - 31490167
Alignment:
Q  113 ggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| ||||| ||||||||||| ||| ||  ||| ||||| |||||||| |  || || ||||| ||||||||||||||||||||  |||||||    
T  31490073 ggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgataggggcaacagtagccattgattgacc 31490167  T

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Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 19674333 - 19674237
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgac 206  Q
    ||||| |||||||||||||||||||| ||  ||  ||| ||||| |||||||| |  || || ||||| ||||| ||||| ||||||||| ||||||    
T  19674333 aatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatggattgac 19674237  T

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Target: scaffold0089 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 29660 - 29561
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||||| |||||||||||||||||||| ||  |||||||||||||||| ||||| |  ||||||||||||||||| ||||||||||||||| |||||||    
T  29660 agaatggcggaaagaaaggatgctgagaatacggcgcatacgggtacgatggaggcatttgggcagcattaataggagcaacagtagccatggattgacc 29561  T

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Target: scaffold0089; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 40428 - 40527
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    |||||||  ||||||||||||||||||| ||  ||||||| ||||||| |||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  40428 agaatggcagaaagaaaggatgctgagaatacggcgcatatgggtacggcggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 40527  T

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Target: scaffold0089; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 47346 - 47435
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatg 199  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| || ||||| |  ||||| ||||| ||| | |||||||||||||||    
T  47346 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgatggaggcatttgggctgcattgataagagcaacagtagccatg 47435  T

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Target: scaffold0260 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 3014 - 3083
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcatt 177  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  3014 agaatggtggaaagaagggatgctgagagtattgcgcgtacgggtacgacggaggtagctgagcagcatt 3083  T

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Target: scaffold0109 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 21464 - 21366
Alignment:
Q  108 agaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgac 206  Q
    |||||||||| ||||||||||||||||||||||||   ||| |||||| |||||||| ||| | |||||| || |||||||||||||||| | ||||||    
T  21464 agaatggtgggaagaaaggatgctgagagtattgcatgtactggtacggcggaggtagctgagaagcattgatgggggcaacagtagccacggattgac 21366  T

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Target: scaffold0143 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 27187 - 27090
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  ||||||| ||||| |||||||| |  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  27187 aatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgacc 27090  T

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Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 491 - 588
Alignment:
Q  110 aatggtggaaagaaaggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatgaattgacc 207  Q
    ||||| |||||||||||||||||||| ||  || |||| ||||| |||||||| |  || || ||||| ||||| ||||||||||||||| |||||||    
T  491 aatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgacc 588  T

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