View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6868A_low_254 (Length: 236)
Name: NF6868A_low_254
Description: NF6868A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6868A_low_254 |
 | |
|
| [»] chr3 (29 HSPs) |
| |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 29)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 9839012 - 9838776
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| |
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|
| T |
9839012 |
tcaagattattgctatcccatgttatggaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccacgccc |
9838913 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838912 |
tcatatcaaaatgttgttgaacttcttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
9838813 |
T |
|
| Q |
200 |
attgttatgggttgtgtctctttgagatagcaacatg |
236 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838812 |
attgttatgggttgtgtctctttgagatagcaacatg |
9838776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 9849890 - 9849654
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| |
|
|
| T |
9849890 |
tcaagattattgctatcccatgttatggaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccacgccc |
9849791 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849790 |
tcatatcaaaatgttgttgaacttcttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
9849691 |
T |
|
| Q |
200 |
attgttatgggttgtgtctctttgagatagcaacatg |
236 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849690 |
attgttatgggttgtgtctctttgagatagcaacatg |
9849654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 10375763 - 10375999
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
10375763 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagcccatgcct |
10375862 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| |
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|
| T |
10375863 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgtgcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
10375962 |
T |
|
| Q |
200 |
attgttatgggttgtgtctctttgagatagcaacatg |
236 |
Q |
| |
|
||| ||||| | ||||||| | | |||||||||||| |
|
|
| T |
10375963 |
attattatgcgatgtgtctgtctctgatagcaacatg |
10375999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 10127079 - 10126843
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||||||||||| ||| | |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| || |||||| |
|
|
| T |
10127079 |
tcaagattattgctatcccaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcct |
10126980 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10126979 |
tcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcccaaacctcccatgcccaaaattgcaacaacacctat |
10126880 |
T |
|
| Q |
200 |
attgttatgggttgtgtctctttgagatagcaacatg |
236 |
Q |
| |
|
||| ||||||| ||||||||| ||||||||||||||| |
|
|
| T |
10126879 |
attattatgggatgtgtctctctgagatagcaacatg |
10126843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 11769385 - 11769149
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||| |||||| |||||| |
|
|
| T |
11769385 |
tcaagattattgctatcccaagttcttgaagtgaccgattcaaggagagacctggttactctcataatatcaaaatcctcagacacgcaagcccatgcct |
11769286 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
|||||||||||| ||||||||||| || ||||||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11769285 |
tcaaatcaaaatattgttgaacttctttatcattgtagacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
11769186 |
T |
|
| Q |
200 |
attgttatgggttgtgtctctttgagatagcaacatg |
236 |
Q |
| |
|
||| |||||| |||||||||| || |||||||||||| |
|
|
| T |
11769185 |
attattatggattgtgtctctctgtgatagcaacatg |
11769149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 10663677 - 10663441
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
||||||| ||||||||||| ||| | |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| || |||||| |
|
|
| T |
10663677 |
tcaagatctttgctatcccaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcct |
10663578 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10663577 |
tcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
10663478 |
T |
|
| Q |
200 |
attgttatgggttgtgtctctttgagatagcaacatg |
236 |
Q |
| |
|
||| ||||||||||||||||| || |||||||||||| |
|
|
| T |
10663477 |
attattatgggttgtgtctctctgtgatagcaacatg |
10663441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 10433962 - 10434198
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| | |||| |
|
|
| T |
10433962 |
tcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaatcctgagacacacaagcccaggcct |
10434061 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
||||||||||||| |||||||||| || ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10434062 |
tcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctat |
10434161 |
T |
|
| Q |
200 |
attgttatgggttgtgtctctttgagatagcaacatg |
236 |
Q |
| |
|
|| ||||| ||||||| ||| || |||||||||||| |
|
|
| T |
10434162 |
cttattatgagttgtgtttctctgtgatagcaacatg |
10434198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 10184393 - 10184157
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||||||||||| ||| | |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||| |
|
|
| T |
10184393 |
tcaagattattgctatcccaagttgtggaagtgacagattcaaggagagacttggttactctcataatatcaaaatcctcggacacacaagcccacgccc |
10184294 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
||| |||||||||||||||||||| || |||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10184293 |
tcatatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
10184194 |
T |
|
| Q |
200 |
attgttatgggttgtgtctctttgagatagcaacatg |
236 |
Q |
| |
|
| ||||||||||||||||| || || ||||||||| |
|
|
| T |
10184193 |
agcattatgggttgtgtctctctgtgacagcaacatg |
10184157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 10032154 - 10031918
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
||||||| ||||||||| | ||| | |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||| | |||| |
|
|
| T |
10032154 |
tcaagatctttgctatccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaagcccaggcct |
10032055 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10032054 |
tcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
10031955 |
T |
|
| Q |
200 |
attgttatgggttgtgtctctttgagatagcaacatg |
236 |
Q |
| |
|
||| ||||||| || |||||| || |||||||||||| |
|
|
| T |
10031954 |
attattatgggatgcgtctctctgtgatagcaacatg |
10031918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 10260849 - 10260613
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||| ||||||| |||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| | |||| |
|
|
| T |
10260849 |
tcaagattattgatatcccaatttctagaagtgactgattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccacgcct |
10260750 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
||| ||||||||||||||||||| || |||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10260749 |
tcatgtcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
10260650 |
T |
|
| Q |
200 |
attgttatgggttgtgtctctttgagatagcaacatg |
236 |
Q |
| |
|
||| || | |||||| ||||| || |||||||||||| |
|
|
| T |
10260649 |
attattgttggttgtttctctctgtgatagcaacatg |
10260613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 10580752 - 10580516
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||||| ||| | ||| | |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| || | |||| |
|
|
| T |
10580752 |
tcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccacgcct |
10580653 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
||| ||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580652 |
tcatgtcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
10580553 |
T |
|
| Q |
200 |
attgttatgggttgtgtctctttgagatagcaacatg |
236 |
Q |
| |
|
||| |||||| |||||| ||| || |||||||||||| |
|
|
| T |
10580552 |
attattatggattgtgtttctctgtgatagcaacatg |
10580516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 10077420 - 10077208
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
||||||| |||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||| |
|
|
| T |
10077420 |
tcaagatcattgttatcccaagttctagaagtgatcgattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccatgcct |
10077321 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
|||||||||||| | | ||||||| | ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10077320 |
gcaaatcaaaatggtatcgaactttataatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
10077221 |
T |
|
| Q |
200 |
attgttatgggtt |
212 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
10077220 |
cttattatgggtt |
10077208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 10088940 - 10088721
Alignment:
| Q |
2 |
caagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcctt |
100 |
Q |
| |
|
|||||| |||||||||| | ||| | |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| || ||||||| |
|
|
| T |
10088940 |
caagatcattgctatccgaagttgtcgaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcctt |
10088841 |
T |
|
| Q |
101 |
caaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctata |
200 |
Q |
| |
|
|||||||||||| |||||||||| || ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10088840 |
caaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctata |
10088741 |
T |
|
| Q |
201 |
ttgttatgggttgtgtctct |
220 |
Q |
| |
|
|| || | |||||| ||||| |
|
|
| T |
10088740 |
ttattgtcggttgtttctct |
10088721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 10195823 - 10195604
Alignment:
| Q |
2 |
caagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcctt |
100 |
Q |
| |
|
|||||| |||||||||| | ||| | |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| || ||||||| |
|
|
| T |
10195823 |
caagatcattgctatccgaagttgtcgaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaacccatgcctt |
10195724 |
T |
|
| Q |
101 |
caaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctata |
200 |
Q |
| |
|
|||||||||||| |||||||||| || ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10195723 |
caaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctata |
10195624 |
T |
|
| Q |
201 |
ttgttatgggttgtgtctct |
220 |
Q |
| |
|
|| || | |||||| ||||| |
|
|
| T |
10195623 |
ttattgtcggttgtttctct |
10195604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 10363716 - 10363936
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||||| ||| | ||| | |||||| | ||||||||||||||||| |||||||||| ||||||||||||||| || |||||| || |||||| |
|
|
| T |
10363716 |
tcaagattattgctttccgaagttatggaagtggcagattcaaggagagactttgttactctcataatatcaaaatcctcagagacacaaacccatgcct |
10363815 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10363816 |
tcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctat |
10363915 |
T |
|
| Q |
200 |
attgttatgggttgtgtctct |
220 |
Q |
| |
|
||| || | |||||| ||||| |
|
|
| T |
10363916 |
attattgtcggttgtttctct |
10363936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 11130944 - 11131151
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||| | ||||| | ||||||||||| ||||||||||||| || |||||||| ||||||||||||||||| || ||||||||| |||| | |
|
|
| T |
11130944 |
tcaagattattgttttcccaagcccttgaagtgacagattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgctt |
11131043 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
| | |||||| |||| |||||||||||||||||||||| ||| ||| || ||||| ||||| || | ||||||||| || ||||||||||||||||| || |
|
|
| T |
11131044 |
tgagatcaaagtgttcttgaactttttcatcattgtaagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaacaacaccgat |
11131143 |
T |
|
| Q |
200 |
attgttat |
207 |
Q |
| |
|
|||||||| |
|
|
| T |
11131144 |
attgttat |
11131151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 11148772 - 11148979
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||| | ||||| | ||||||||||| ||||||||||||| || |||||||| ||||||||||||||||| || ||||||||| |||| | |
|
|
| T |
11148772 |
tcaagattattgttttcccaagcccttgaagtgacagattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgctt |
11148871 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
| | |||||| |||| |||||||||||||||||||||| ||| ||| || ||||| ||||| || | ||||||||| || ||||||||||||||||| || |
|
|
| T |
11148872 |
tgagatcaaagtgttcttgaactttttcatcattgtaagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaacaacaccgat |
11148971 |
T |
|
| Q |
200 |
attgttat |
207 |
Q |
| |
|
|||||||| |
|
|
| T |
11148972 |
attgttat |
11148979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 11159935 - 11160142
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||| | ||||| | |||||||||||| |||||||| |||| || ||||| ||||||||||||||||| || ||||||||| |||| | |
|
|
| T |
11159935 |
tcaagattattggtttcccaagctcttgaagtgacagattcaagaagagttttagttacagataaaatatcaaaatcctcagatacacaagcccatgctt |
11160034 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
| ||||||||||| | |||||||||||||| ||||||||||||||| || || || ||||| || | ||||||||| || |||||||||||||| ||||| |
|
|
| T |
11160035 |
tgaaatcaaaatgatcttgaactttttcattattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacgcctat |
11160134 |
T |
|
| Q |
200 |
attgttat |
207 |
Q |
| |
|
|||||||| |
|
|
| T |
11160135 |
attgttat |
11160142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 8861437 - 8861230
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||| | ||||| | |||||||||||| |||||||| |||| || ||||| | |||||||||||||||| || ||||||||| |||| | |
|
|
| T |
8861437 |
tcaagattattgttttcccaagctcttgaagtgacagattcaagaagagttttagttacagttgaaatatcaaaatcctctgatacacaagcccatgctt |
8861338 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
| | |||||| || | |||||||||||||||||||||||||||||| || || || ||||| || | ||||||||| || ||||||||||||||||| || |
|
|
| T |
8861337 |
tgagatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacaccgat |
8861238 |
T |
|
| Q |
200 |
attgttat |
207 |
Q |
| |
|
|||||||| |
|
|
| T |
8861237 |
attgttat |
8861230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 207
Target Start/End: Complemental strand, 10889454 - 10889250
Alignment:
| Q |
4 |
agattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgccttca |
102 |
Q |
| |
|
||||||||| | ||||| | ||||||||| || |||||||| |||| || ||||| | ||||||||||||||||| || ||||||||| |||| || | |
|
|
| T |
10889454 |
agattattgttttcccaagctcttgaagtcacagattcaagaagagttttagttacagttaaaatatcaaaatcctcagatacacaagcccatgctttga |
10889355 |
T |
|
| Q |
103 |
aatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctatatt |
202 |
Q |
| |
|
|||||| || | |||||||||||||||||||||||||||||| || || || ||||| || | ||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
10889354 |
gatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacaccgatatt |
10889255 |
T |
|
| Q |
203 |
gttat |
207 |
Q |
| |
|
||||| |
|
|
| T |
10889254 |
gttat |
10889250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 207
Target Start/End: Complemental strand, 10527452 - 10527281
Alignment:
| Q |
37 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgccttcaaatcaaaatgttgttgaactttttcatcattgt |
135 |
Q |
| |
|
||||||| |||||||||||||||||||| || ||| |||||||| || ||| || || | ||||| | ||||||||| |||| ||| ||||||||||||| |
|
|
| T |
10527452 |
gattcaatgagagacttggttactctcacaacatcgaaatcctctgatacataaacccaggccttgagatcaaaatggtgttcaaccttttcatcattgt |
10527353 |
T |
|
| Q |
136 |
aaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
207 |
Q |
| |
|
|||||||||| || ||||| ||||| || | ||||||||| ||||| |||||||||||||||| ||| |||| |
|
|
| T |
10527352 |
aaacaagttgtgcaagggttgttttaccgacacctcccatacccaagattgcaacaacacctaaattattat |
10527281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 207
Target Start/End: Complemental strand, 10500671 - 10500500
Alignment:
| Q |
37 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaag-ccatgccttcaaatcaaaatgttgttgaactttttcatcattgt |
135 |
Q |
| |
|
|||||||||||||| ||||||| ||||| || ||| |||||||| | |||||| ||||||||||| ||||||||||| || || ||| || || |||| |
|
|
| T |
10500671 |
gattcaaggagagatttggttattctcacaacatcgaaatcctccggtacacaaatccatgccttcagatcaaaatgttcttcaattttatcgtcgttgt |
10500572 |
T |
|
| Q |
136 |
aaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
207 |
Q |
| |
|
|||||||||| || || || ||||| || | |||||||| |||||||||||||||||||||| ||| |||| |
|
|
| T |
10500571 |
aaacaagttgagcaagtgttgttttaccgacgcctcccatacccaaaattgcaacaacacctaaattattat |
10500500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 207
Target Start/End: Complemental strand, 10517579 - 10517408
Alignment:
| Q |
37 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgccttcaaatcaaaatgttgttgaactttttcatcattgt |
135 |
Q |
| |
|
|||||||||| |||||||||| |||| | || |||||||||||| || |||||| || | || || |||||||||||||||| ||||||| ||||||||| |
|
|
| T |
10517579 |
gattcaaggatagacttggttgctctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
10517480 |
T |
|
| Q |
136 |
aaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
207 |
Q |
| |
|
|||||| || || ||||| ||||| || | |||||||| |||| ||||||| ||||||||| ||| |||| |
|
|
| T |
10517479 |
aaacaaactgtgcaagggtcgttttaccgacgcctcccatacccacaattgcagcaacacctaaattattat |
10517408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 207
Target Start/End: Original strand, 11781957 - 11782128
Alignment:
| Q |
37 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagccatgccttc-aaatcaaaatgttgttgaactttttcatcattgt |
135 |
Q |
| |
|
|||||||||||||||||||||| ||| | || ||| |||||||| || |||||| || | ||| |||||||||||||||| |||||| ||||||||| |
|
|
| T |
11781957 |
gattcaaggagagacttggttattctaacaacatcgaaatcctccgatacacaaacccagactttgaaatcaaaatgttgttcaactttcacatcattgt |
11782056 |
T |
|
| Q |
136 |
aaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
207 |
Q |
| |
|
||||||| || || ||||| ||||| || | |||||||| ||||||||||| |||||||||| ||| |||| |
|
|
| T |
11782057 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccaaaattgcgacaacacctaaattattat |
11782128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 13161077 - 13160935
Alignment:
| Q |
55 |
gttactctcaaaatatcaaaatcctcggacacacaagccatgcctt-caaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgaggg |
153 |
Q |
| |
|
|||||||||| |||||| |||||||| || |||||| || | ||| || ||||||||| | |||||||| || |||||| |||| ||||||||| || | |
|
|
| T |
13161077 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13160978 |
T |
|
| Q |
154 |
tagttttccctaaacctcccatgcccaaaattgcaacaacacc |
196 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
13160977 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
13160935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 13171128 - 13170986
Alignment:
| Q |
55 |
gttactctcaaaatatcaaaatcctcggacacacaagccatgcctt-caaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgaggg |
153 |
Q |
| |
|
|||||||||| |||||| |||||||| || |||||| || | ||| || ||||||||| | |||||||| || |||||| |||| ||||||||| || | |
|
|
| T |
13171128 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13171029 |
T |
|
| Q |
154 |
tagttttccctaaacctcccatgcccaaaattgcaacaacacc |
196 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
13171028 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
13170986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 13289762 - 13289620
Alignment:
| Q |
55 |
gttactctcaaaatatcaaaatcctcggacacacaagccatgcctt-caaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgaggg |
153 |
Q |
| |
|
||||||||||||||||| |||||||| || |||||| || | ||| || ||||||||| | |||||||| || |||||| |||| ||||||||| || | |
|
|
| T |
13289762 |
gttactctcaaaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13289663 |
T |
|
| Q |
154 |
tagttttccctaaacctcccatgcccaaaattgcaacaacacc |
196 |
Q |
| |
|
| ||||| || | ||| ||||| ||||||||||| || ||||| |
|
|
| T |
13289662 |
tggttttgccaacaccgcccatacccaaaattgcgaccacacc |
13289620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 13333001 - 13332859
Alignment:
| Q |
55 |
gttactctcaaaatatcaaaatcctcggacacacaagccatgcctt-caaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgaggg |
153 |
Q |
| |
|
|||||||||| |||||| |||||||| || |||||| || | ||| || ||||||||| | |||||||| || |||||| |||| ||||||||| || | |
|
|
| T |
13333001 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13332902 |
T |
|
| Q |
154 |
tagttttccctaaacctcccatgcccaaaattgcaacaacacc |
196 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
13332901 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
13332859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 13344183 - 13344044
Alignment:
| Q |
58 |
actctcaaaatatcaaaatcctcggacacacaagccatgcctt-caaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtag |
156 |
Q |
| |
|
||||||| |||||| |||||||| || |||||| || | ||| || ||||||||| | |||||||| || |||||| |||| ||||||||| || || | |
|
|
| T |
13344183 |
actctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtgg |
13344084 |
T |
|
| Q |
157 |
ttttccctaaacctcccatgcccaaaattgcaacaacacc |
196 |
Q |
| |
|
|||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
13344083 |
ttttgccaacaccgcccatacccaaaattgcaaccacacc |
13344044 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 26907048 - 26906813
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgcct |
99 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||| || |||||| |
|
|
| T |
26907048 |
tcaagattattggtatcccaagttctggaagtgaccgattcaaggagagatttggttactctcataatatcaaaatcctcagacacacaaacccatgcct |
26906949 |
T |
|
| Q |
100 |
tcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
||||||||||||| ||||||||| || ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26906948 |
tcaaatcaaaatgccgttgaacttctttatcattgtaaagaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
26906849 |
T |
|
| Q |
200 |
attgttatgggttgtgtctctttgagatagcaacat |
235 |
Q |
| |
|
||| ||||||||||||||||| | ||||||||||| |
|
|
| T |
26906848 |
attattatgggttgtgtctctctctgatagcaacat |
26906813 |
T |
|
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Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 37 - 207
Target Start/End: Original strand, 17852898 - 17853069
Alignment:
| Q |
37 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgccttcaaatcaaaatgttgttgaactttttcatcattgt |
135 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||||| || || |||||| || | || || | ||||||||| |||| ||| ||||||||||||| |
|
|
| T |
17852898 |
gattcaaggagagacttggttactctcacaacatcaaaatcttctgatacacaaacccaggctttgagatcaaaatgatgttcaaccttttcatcattgt |
17852997 |
T |
|
| Q |
136 |
aaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
207 |
Q |
| |
|
||||||| || || ||||| ||||| || | ||||||||| ||||| |||||||||||||||| |||||||| |
|
|
| T |
17852998 |
aaacaagctgtgcaagggtcgttttaccgacacctcccatccccaatattgcaacaacacctaaattgttat |
17853069 |
T |
|
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Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 207
Target Start/End: Complemental strand, 11485132 - 11484961
Alignment:
| Q |
37 |
gattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagcc-atgccttcaaatcaaaatgttgttgaactttttcatcattgt |
135 |
Q |
| |
|
||||||||||| |||||||||| |||| | ||| |||||||| || |||||| || |||| || | ||||||||| |||| |||||||||||| |||| |
|
|
| T |
11485132 |
gattcaaggagggacttggttatcctcacgacatcgaaatcctccgatacacaaacccatgctttgagatcaaaatgctgttcaactttttcatcgttgt |
11485033 |
T |
|
| Q |
136 |
aaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
207 |
Q |
| |
|
|||||||||| || ||||| ||||| || | |||||||| ||||||||||||||||||||| ||| |||| |
|
|
| T |
11485032 |
aaacaagttgtgcaagggtcgttttaccgacgcctcccataaccaaaattgcaacaacacctaaattattat |
11484961 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 207
Target Start/End: Original strand, 44957664 - 44957834
Alignment:
| Q |
38 |
attcaaggagagacttggttactctcaaaatatcaaaatcctcggacacaca-agccatgccttcaaatcaaaatgttgttgaactttttcatcattgta |
136 |
Q |
| |
|
||||||| |||||||| |||| ||| | || || |||||||| || ||||| | |||||| || | ||| |||||||||| ||||||| ||||||||| |
|
|
| T |
44957664 |
attcaagaagagactttgttattctaacaacattgaaatcctctgatacacatatccatgctttgagatcgaaatgttgttcaacttttatatcattgta |
44957763 |
T |
|
| Q |
137 |
aacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctatattgttat |
207 |
Q |
| |
|
||||||||| ||||| || ||||| || | ||||||||| || || | ||||||||||||| ||| |||| |
|
|
| T |
44957764 |
aacaagttgtgcgagagtcgttttaccgacacctcccatacctaaggtggcaacaacacctaaattattat |
44957834 |
T |
|
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Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 29836794 - 29836587
Alignment:
| Q |
1 |
tcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcggacacacaagccatgcctt |
100 |
Q |
| |
|
||||| |||||| ||| |||| |||||||||||| |||||||||||| |||||||||||||| ||||||||||| || ||||||||| || | ||| |
|
|
| T |
29836794 |
tcaaggttattggtattccattctcttgaagtgacaacttcaaggagagatttggttactctcaacatatcaaaatcttcagacacacaaacccagactt |
29836695 |
T |
|
| Q |
101 |
-caaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgagggtagttttccctaaacctcccatgcccaaaattgcaacaacacctat |
199 |
Q |
| |
|
| ||||||||| | || ||||| ||| | ||||| | |||| | |||||||| ||||| || | |||||||||||| |||||| || |||||||| |
|
|
| T |
29836694 |
gtacatcaaaatgatttttaacttcttcctggttgtatataagtcgagcgagggtcgttttaccgatacctcccatgcctgtaattgcgactacacctat |
29836595 |
T |
|
| Q |
200 |
attgttat |
207 |
Q |
| |
|
||| |||| |
|
|
| T |
29836594 |
attattat |
29836587 |
T |
|
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Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 135860 - 136002
Alignment:
| Q |
55 |
gttactctcaaaatatcaaaatcctcggacacacaagccatgcctt-caaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgaggg |
153 |
Q |
| |
|
|||||||||| |||||| |||||||| || |||||| || | ||| || ||||||||| | |||||||| || |||||| |||| ||||||||| || | |
|
|
| T |
135860 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
135959 |
T |
|
| Q |
154 |
tagttttccctaaacctcccatgcccaaaattgcaacaacacc |
196 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
135960 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
136002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 145911 - 146053
Alignment:
| Q |
55 |
gttactctcaaaatatcaaaatcctcggacacacaagccatgcctt-caaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgaggg |
153 |
Q |
| |
|
|||||||||| |||||| |||||||| || |||||| || | ||| || ||||||||| | |||||||| || |||||| |||| ||||||||| || | |
|
|
| T |
145911 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
146010 |
T |
|
| Q |
154 |
tagttttccctaaacctcccatgcccaaaattgcaacaacacc |
196 |
Q |
| |
|
| ||||| || | ||| ||||| |||||||||||||| ||||| |
|
|
| T |
146011 |
tggttttgccaacaccgcccatacccaaaattgcaaccacacc |
146053 |
T |
|
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Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 194
Target Start/End: Original strand, 31679703 - 31679845
Alignment:
| Q |
53 |
tggttactctcaaaatatcaaaatcctcggacacacaagcc-atgccttcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgggcgag |
151 |
Q |
| |
|
||||||| ||||||| |||||| || ||||||| |||| || | || || | ||||||| ||| |||||| | || ||||||||||| |||||| || || |
|
|
| T |
31679703 |
tggttaccctcaaaacatcaaactcttcggacagacaaacccaagcttttacatcaaaacgttcttgaacatctttatcattgtaaagaagttgagctag |
31679802 |
T |
|
| Q |
152 |
ggtagttttccctaaacctcccatgcccaaaattgcaacaaca |
194 |
Q |
| |
|
|| ||||| || | |||||||||||| ||||||| ||||||| |
|
|
| T |
31679803 |
ggctgttttaccgacacctcccatgccgaaaattgaaacaaca |
31679845 |
T |
|
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