View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6868A_low_277 (Length: 230)
Name: NF6868A_low_277
Description: NF6868A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6868A_low_277 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 18459990 - 18459761
Alignment:
| Q |
1 |
tttagaatgacaccaactagtcaacaccagaggcatagtaatgacctaaaatgcagttaagtaaaattccaagtgttctttaatcatgcagggttttatg |
100 |
Q |
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| T |
18459990 |
tttagaatgacaccaactagtcaacaccagaggcatagtaatgacctaaaatgcagttaagtaaaattccaagtgttctttaatcatgcagggttttatg |
18459891 |
T |
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| Q |
101 |
ttgaatttgaatgctaattaattactgcctgttatatgtagtatatattcactagtaaagatcctgtataacataaaaccgaccatttaatggccaccgg |
200 |
Q |
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| T |
18459890 |
ttgaatttgaatgctaattaactactgcctgttatatgtagtatatattcactagtaaagatcctgtataacataaaaccgaccatttaatggccaccgg |
18459791 |
T |
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| Q |
201 |
tacagccactatcactggattgagctttga |
230 |
Q |
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||||||| |||||||||||||||||||||| |
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| T |
18459790 |
tacagccgctatcactggattgagctttga |
18459761 |
T |
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