View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6868A_low_278 (Length: 230)
Name: NF6868A_low_278
Description: NF6868A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6868A_low_278 |
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Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 43825303 - 43825077
Alignment:
| Q |
1 |
ttaagagcccaatattagtgttgggccggattttaccaccaaccaagaacataaaaacccttnnnnnnnagtttcatttcttcttactctcacagagctc |
100 |
Q |
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| T |
43825303 |
ttaagggcccaatattagtgttgggccggattttaccaccaaccaagaacataaaaaccctacccacccagtttcatttcttcctactctcacagagctc |
43825204 |
T |
|
| Q |
101 |
tttctttccccaactgttgaagtgcttcataaccctaatctcaacctcactctgctacttccgccaccatggctgcccctcgtcaactctctcagaaaga |
200 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43825203 |
tttctatccccaactgttgaagtgcttcataaccctaatctcaaccacactctgctacttccgccaccatggctgcccctcgtcaactctctcagaaaga |
43825104 |
T |
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| Q |
201 |
agctgatatccagatgatgcttgccgc |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
43825103 |
agctgatatccagatgatgcttgccgc |
43825077 |
T |
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