View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6868A_low_298 (Length: 229)
Name: NF6868A_low_298
Description: NF6868A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6868A_low_298 |
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Alignment Details
Target: chr2 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 9411719 - 9411841
Alignment:
| Q |
71 |
gtatccattggaataatagcatggcgaaaaccatactccacgatttcactatgctatgaaagaataatctaaaaatcagaatccaagagtattactacaa |
170 |
Q |
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| T |
9411719 |
gtatccattggaataatagcatggcgaaaaccatactccacgatttcactatgctatgaaagaataatctaaaaatcagaatccaagagta-tactacaa |
9411817 |
T |
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| Q |
171 |
acactcatgcaacaaaatatacaa |
194 |
Q |
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| T |
9411818 |
acactcatgcaacaaaatatacaa |
9411841 |
T |
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