View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6868A_low_330 (Length: 220)
Name: NF6868A_low_330
Description: NF6868A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6868A_low_330 |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 35617742 - 35617929
Alignment:
| Q |
18 |
aatatggatgcatgtaagaaaaatgatgaaagtgctactgtgaaatcaacagcaacacaaacagtcaagtttccagtttacgatactgggatattggagg |
117 |
Q |
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| T |
35617742 |
aatatggatgcatgtaagaaaaatgatgaaagtgctactgtgaaatcaacagcaacaaaagcagtcaagtttccggtttgcgatactgggataatggagg |
35617841 |
T |
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| Q |
118 |
aggaagtaacagccgaaggcgaatataaagtgcaggagaagagtattgtgcaggaagatcttaaacatggtactagtactactgatgt |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
35617842 |
aggaagtaacagccgaaggcgaatataaagtgcaggagaagagtattgtgaaggaagatcttaaacatggtactagtactactgatgt |
35617929 |
T |
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