View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6868A_low_357 (Length: 205)

Name: NF6868A_low_357
Description: NF6868A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6868A_low_357
NF6868A_low_357
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-202)||(20053-20254)
scaffold0124 (5-201)||(30095-30291)
[»] chr3 (49 HSPs)
chr3 (1-202)||(16626958-16627158)
chr3 (1-202)||(18529999-18530200)
chr3 (5-190)||(15893165-15893350)
chr3 (5-201)||(8295578-8295774)
chr3 (5-201)||(8301723-8301919)
chr3 (5-201)||(4797112-4797308)
chr3 (5-201)||(15741541-15741737)
chr3 (5-201)||(18050865-18051061)
chr3 (11-201)||(4721234-4721424)
chr3 (11-201)||(35880369-35880559)
chr3 (5-201)||(29149214-29149410)
chr3 (11-201)||(18330277-18330467)
chr3 (11-201)||(6191919-6192109)
chr3 (11-201)||(8211344-8211534)
chr3 (11-201)||(18277517-18277707)
chr3 (11-201)||(18292818-18293008)
chr3 (11-201)||(18308119-18308309)
chr3 (11-190)||(10395750-10395929)
chr3 (11-150)||(22871339-22871478)
chr3 (11-150)||(22886398-22886537)
chr3 (11-117)||(5466672-5466778)
chr3 (11-141)||(5596831-5596961)
chr3 (11-201)||(7072815-7073005)
chr3 (11-201)||(28116422-28116612)
chr3 (11-201)||(47023056-47023246)
chr3 (11-118)||(18224877-18224984)
chr3 (23-201)||(5013315-5013493)
chr3 (11-189)||(6542939-6543117)
chr3 (17-118)||(4347155-4347256)
chr3 (17-118)||(28020964-28021065)
chr3 (23-118)||(17985433-17985528)
chr3 (11-150)||(18242381-18242520)
chr3 (11-150)||(20577327-20577466)
chr3 (23-153)||(7996213-7996343)
chr3 (23-153)||(10642721-10642851)
chr3 (5-111)||(20065739-20065845)
chr3 (11-201)||(21674296-21674486)
chr3 (11-141)||(36997554-36997684)
chr3 (11-141)||(51781674-51781804)
chr3 (11-150)||(11110826-11110965)
chr3 (11-117)||(4416603-4416709)
chr3 (11-141)||(24327822-24327952)
chr3 (11-117)||(28338989-28339095)
chr3 (11-117)||(31964938-31965044)
chr3 (11-117)||(50134536-50134642)
chr3 (11-114)||(5609787-5609890)
chr3 (11-141)||(51796762-51796893)
chr3 (11-87)||(29665450-29665526)
chr3 (11-150)||(48465569-48465708)
[»] chr2 (36 HSPs)
chr2 (1-202)||(19456821-19457022)
chr2 (1-202)||(21703564-21703765)
chr2 (5-190)||(27434851-27435036)
chr2 (20-202)||(27392630-27392812)
chr2 (5-201)||(23128973-23129169)
chr2 (5-201)||(28881852-28882048)
chr2 (5-201)||(20837556-20837752)
chr2 (5-201)||(12655180-12655376)
chr2 (17-201)||(37374799-37374983)
chr2 (11-150)||(261178-261317)
chr2 (11-201)||(34279087-34279277)
chr2 (11-118)||(12717018-12717125)
chr2 (11-150)||(13936957-13937096)
chr2 (11-117)||(21677595-21677701)
chr2 (11-150)||(12586490-12586629)
chr2 (11-118)||(31876002-31876109)
chr2 (11-150)||(34286043-34286182)
chr2 (11-150)||(34291103-34291242)
chr2 (11-118)||(34861401-34861508)
chr2 (11-118)||(37686322-37686429)
chr2 (11-118)||(37701587-37701694)
chr2 (11-150)||(37925182-37925321)
chr2 (11-118)||(39889783-39889890)
chr2 (11-150)||(9350407-9350546)
chr2 (23-118)||(16829763-16829858)
chr2 (23-118)||(16891623-16891718)
chr2 (11-150)||(27776896-27777035)
chr2 (11-150)||(27803381-27803520)
chr2 (11-150)||(27816663-27816802)
chr2 (11-150)||(40233188-40233327)
chr2 (11-201)||(11635602-11635792)
chr2 (11-201)||(11641791-11641981)
chr2 (11-141)||(19416912-19417042)
chr2 (11-117)||(22926441-22926547)
chr2 (23-111)||(32049526-32049614)
chr2 (38-150)||(39052268-39052380)
[»] chr7 (27 HSPs)
chr7 (1-190)||(16040980-16041169)
chr7 (1-202)||(16450295-16450496)
chr7 (5-201)||(16518720-16518916)
chr7 (5-201)||(16503684-16503880)
chr7 (5-201)||(2154216-2154412)
chr7 (5-201)||(10917169-10917365)
chr7 (12-201)||(11425087-11425276)
chr7 (11-201)||(5127635-5127825)
chr7 (11-201)||(31124554-31124744)
chr7 (11-153)||(45387034-45387176)
chr7 (11-201)||(5147650-5147840)
chr7 (11-201)||(24592851-24593041)
chr7 (11-150)||(9618345-9618484)
chr7 (11-118)||(26275404-26275511)
chr7 (11-117)||(4145433-4145539)
chr7 (11-201)||(16736770-16736960)
chr7 (11-201)||(16751824-16752014)
chr7 (11-201)||(17523175-17523365)
chr7 (11-201)||(17529850-17530040)
chr7 (11-116)||(26320179-26320284)
chr7 (11-118)||(3445020-3445127)
chr7 (11-141)||(11441263-11441393)
chr7 (11-118)||(26486054-26486161)
chr7 (11-150)||(26670224-26670363)
chr7 (11-118)||(31564709-31564816)
chr7 (17-201)||(26434900-26435084)
chr7 (11-150)||(26538183-26538322)
[»] chr4 (23 HSPs)
chr4 (1-202)||(15227529-15227730)
chr4 (1-200)||(15285339-15285538)
chr4 (1-202)||(1899916-1900117)
chr4 (1-202)||(14235939-14236140)
chr4 (5-201)||(14664675-14664871)
chr4 (25-202)||(15391771-15391948)
chr4 (5-201)||(17013657-17013853)
chr4 (11-201)||(24592735-24592925)
chr4 (11-201)||(14763728-14763918)
chr4 (11-201)||(36344936-36345126)
chr4 (11-201)||(6569510-6569700)
chr4 (11-201)||(14098198-14098388)
chr4 (11-201)||(19372918-19373108)
chr4 (11-118)||(31126942-31127049)
chr4 (23-201)||(27163753-27163931)
chr4 (11-118)||(30753482-30753589)
chr4 (11-150)||(54833098-54833237)
chr4 (11-141)||(18801046-18801176)
chr4 (11-141)||(33674234-33674364)
chr4 (11-189)||(40106062-40106240)
chr4 (23-201)||(5005527-5005705)
chr4 (23-118)||(21969441-21969536)
chr4 (11-150)||(39850331-39850470)
[»] chr1 (6 HSPs)
chr1 (1-202)||(16208439-16208640)
chr1 (1-202)||(20460748-20460949)
chr1 (5-201)||(41793726-41793922)
chr1 (11-150)||(10962362-10962501)
chr1 (11-150)||(51637910-51638049)
chr1 (11-141)||(28584682-28584812)
[»] chr5 (45 HSPs)
chr5 (5-203)||(23891855-23892053)
chr5 (5-202)||(25198682-25198879)
chr5 (7-201)||(24951761-24951955)
chr5 (5-201)||(24688472-24688668)
chr5 (5-201)||(30934287-30934483)
chr5 (5-201)||(23752765-23752961)
chr5 (5-201)||(23718303-23718500)
chr5 (5-201)||(11549005-11549201)
chr5 (5-200)||(22999429-22999624)
chr5 (11-201)||(33777138-33777328)
chr5 (11-201)||(15659081-15659271)
chr5 (11-189)||(40473873-40474051)
chr5 (5-150)||(2510753-2510898)
chr5 (11-150)||(9317153-9317292)
chr5 (11-150)||(6874004-6874143)
chr5 (11-118)||(12131889-12131996)
chr5 (11-118)||(24681171-24681278)
chr5 (11-118)||(24723698-24723805)
chr5 (11-118)||(37771320-37771427)
chr5 (11-201)||(5637561-5637751)
chr5 (11-117)||(8665796-8665902)
chr5 (11-153)||(15759178-15759320)
chr5 (23-201)||(18375745-18375923)
chr5 (23-201)||(30151669-30151847)
chr5 (11-189)||(37358976-37359154)
chr5 (17-150)||(9548870-9549003)
chr5 (17-141)||(41674420-41674544)
chr5 (11-150)||(18501069-18501208)
chr5 (11-150)||(26480094-26480233)
chr5 (23-150)||(30168171-30168298)
chr5 (11-150)||(31431130-31431269)
chr5 (11-118)||(31826740-31826847)
chr5 (11-118)||(37671813-37671920)
chr5 (11-150)||(37754670-37754809)
chr5 (11-201)||(3789177-3789367)
chr5 (5-150)||(34616223-34616368)
chr5 (23-118)||(33516090-33516185)
chr5 (11-201)||(43077900-43078090)
chr5 (5-118)||(32599784-32599897)
chr5 (11-150)||(13325165-13325304)
chr5 (23-141)||(28648937-28649055)
chr5 (12-118)||(28960120-28960226)
chr5 (11-141)||(29967387-29967517)
chr5 (11-141)||(30029126-30029256)
chr5 (1-38)||(22888287-22888324)
[»] chr8 (19 HSPs)
chr8 (5-201)||(16283091-16283287)
chr8 (5-201)||(19687740-19687936)
chr8 (8-202)||(22081252-22081446)
chr8 (5-201)||(16277196-16277392)
chr8 (5-201)||(14557269-14557465)
chr8 (5-201)||(2137636-2137832)
chr8 (5-201)||(27609282-27609478)
chr8 (11-201)||(18710228-18710418)
chr8 (11-201)||(19674080-19674270)
chr8 (11-141)||(31490133-31490263)
chr8 (5-117)||(31354250-31354362)
chr8 (11-118)||(19208743-19208850)
chr8 (11-150)||(19286158-19286297)
chr8 (23-150)||(28362350-28362477)
chr8 (11-189)||(3329902-3330080)
chr8 (11-189)||(29828967-29829145)
chr8 (11-150)||(19518526-19518665)
chr8 (11-141)||(33258425-33258555)
chr8 (11-201)||(12093116-12093306)
[»] scaffold0089 (3 HSPs)
scaffold0089 (5-201)||(29405-29601)
scaffold0089 (5-201)||(40487-40683)
scaffold0089 (5-201)||(47403-47599)
[»] scaffold0109 (1 HSPs)
scaffold0109 (10-202)||(21208-21400)
[»] scaffold0143 (1 HSPs)
scaffold0143 (5-201)||(26934-27130)
[»] chr6 (37 HSPs)
chr6 (5-201)||(13299312-13299508)
chr6 (5-201)||(22935238-22935434)
chr6 (5-201)||(23857683-23857879)
chr6 (5-201)||(24863356-24863552)
chr6 (10-202)||(20160345-20160534)
chr6 (10-202)||(22172297-22172486)
chr6 (5-201)||(15424678-15424874)
chr6 (5-201)||(26988640-26988836)
chr6 (5-201)||(26999712-26999908)
chr6 (5-150)||(24304979-24305124)
chr6 (11-150)||(26918070-26918209)
chr6 (17-201)||(16749493-16749677)
chr6 (11-201)||(29549117-29549307)
chr6 (5-201)||(27044029-27044225)
chr6 (11-201)||(3695702-3695892)
chr6 (5-201)||(17024901-17025097)
chr6 (11-118)||(4525011-4525118)
chr6 (11-118)||(4757483-4757590)
chr6 (11-150)||(4772687-4772826)
chr6 (11-150)||(27007402-27007541)
chr6 (11-150)||(27484807-27484946)
chr6 (11-118)||(29572735-29572842)
chr6 (11-150)||(29501096-29501235)
chr6 (23-118)||(30558395-30558490)
chr6 (11-150)||(34463728-34463867)
chr6 (11-201)||(4546151-4546341)
chr6 (11-141)||(16944394-16944524)
chr6 (11-201)||(28207081-28207271)
chr6 (17-117)||(26778000-26778100)
chr6 (11-118)||(27360377-27360484)
chr6 (11-118)||(27450720-27450827)
chr6 (11-150)||(16673817-16673956)
chr6 (11-189)||(4724510-4724688)
chr6 (17-118)||(26116792-26116893)
chr6 (5-44)||(22477634-22477673)
chr6 (8-189)||(27272947-27273128)
chr6 (12-189)||(27630077-27630254)
[»] scaffold0029 (1 HSPs)
scaffold0029 (11-201)||(554-744)
[»] scaffold0336 (1 HSPs)
scaffold0336 (11-201)||(7874-8064)
[»] scaffold0099 (1 HSPs)
scaffold0099 (7-201)||(48568-48769)
[»] scaffold0144 (1 HSPs)
scaffold0144 (11-201)||(26626-26816)
[»] scaffold0350 (1 HSPs)
scaffold0350 (11-118)||(7663-7770)
[»] scaffold0237 (1 HSPs)
scaffold0237 (23-201)||(15366-15544)
[»] scaffold0038 (1 HSPs)
scaffold0038 (11-201)||(7579-7769)
[»] scaffold0159 (1 HSPs)
scaffold0159 (11-114)||(9490-9593)
[»] scaffold0415 (1 HSPs)
scaffold0415 (11-150)||(5682-5821)
[»] scaffold0496 (1 HSPs)
scaffold0496 (11-51)||(157-197)


Alignment Details
Target: scaffold0124 (Bit Score: 182; Significance: 1e-98; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 20254 - 20053
Alignment:
Q  1 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20254 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 20155  T
Q  101 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| || ||||||    
T  20154 ccgtacctctttgatgcatttgcggaggattcaactttctcgaacacaataatgccttctctgacagcttcttctaggcgagtccccatggtgaccatct 20055  T
Q  201 ca 202  Q
    ||    
T  20054 ca 20053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 30291 - 30095
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  30291 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 30192  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||| | ||||||||  | ||||||||  |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||| || |||||||    
T  30191 acctcctcgatgcattcacagaggattcggctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccatggtgaccatctc 30095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 182; Significance: 1e-98; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16626958 - 16627158
Alignment:
Q  1 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16626958 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctt-cttcttatgatgaccgtta 16627056  T
Q  101 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  16627057 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctaggcgagtccccatggtgaccatct 16627156  T
Q  201 ca 202  Q
    ||    
T  16627157 ca 16627158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 18530200 - 18529999
Alignment:
Q  1 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18530200 taactgggcagcattaataggggtaacagtagccatggattgactagttccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 18530101  T
Q  101 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatct 200  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  18530100 ccgtatctctttgatgcatttacagaggattcaactttctcgaatacaataatgccttctctgacagcttcttctagacgagtccccatggtgaccatct 18530001  T
Q  201 ca 202  Q
    ||    
T  18530000 ca 18529999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 15893165 - 15893350
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || |||||||  |    
T  15893165 tgggcagcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttactat 15893264  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatg 190  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || |||||||||| ||||||||| |||||||| ||||||    
T  15893265 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttctctgacagcttcttccagacgagttcccatg 15893350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 8295774 - 8295578
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  8295774 tgggctgcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 8295675  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || ||  |||  |||||||| |||||||| |||||| || |||||||    
T  8295674 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccttgacggcttcttccagacgagttcccatggtgaccatctc 8295578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 8301723 - 8301919
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||| || || || ||||| |    
T  8301723 tgggcagcattgataggagcaacaatagccatggattgaccggctccggcagacaccatccatacttccgtttctttcttcttgtggtgtccattaccat 8301822  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    |||||||||| |||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||| || |||||||    
T  8301823 acctctttgacgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccatggtgaccatctc 8301919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 4797112 - 4797308
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  4797112 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 4797211  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||| || |||||||    
T  4797212 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccatggtgaccatctc 4797308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 15741541 - 15741737
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || || || |    
T  15741541 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattgccat 15741640  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||| || |||||||    
T  15741641 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccatggtgaccatctc 15741737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 18051061 - 18050865
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  18051061 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 18050962  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||| || |||||||    
T  18050961 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccatggtgaccatctc 18050865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 4721424 - 4721234
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  4721424 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 4721325  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  4721324 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 4721234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 35880559 - 35880369
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  35880559 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 35880460  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  35880459 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 35880369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 29149214 - 29149410
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  29149214 tgggctgcattgataggagcaatagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 29149313  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  29149314 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 29149410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 18330467 - 18330277
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  18330467 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 18330368  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| |||||||||  ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  18330367 tcgatgcattcacagaggattcagctttctcgagcacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 18330277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 6192109 - 6191919
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||||||||||||||||||  | || ||||||| |||||| |||||||||||||| || || || ||||| |||||||    
T  6192109 gcattgataggagcaacagtagccatggattgaccggctccaactgacaccatccatacttccgtttctttcttcttgtggtgtccattaccatacctct 6192010  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  6192009 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 6191919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 8211534 - 8211344
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  8211534 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 8211435  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | |||||| | || ||||| ||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  8211434 tcgatgcactcgcagaggactcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 8211344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 18277517 - 18277707
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  18277517 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 18277616  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  18277617 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 18277707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 18292818 - 18293008
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  18292818 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 18292917  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  18292918 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 18293008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 18308119 - 18308309
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  18308119 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 18308218  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  18308219 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 18308309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 10395929 - 10395750
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  10395929 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 10395830  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatg 190  Q
    | ||||||||  | ||||||||| ||||||| || |||||||| || || ||||  ||||| || ||||| || ||||||    
T  10395829 tcgatgcattcacagaggattcagctttctcaaacacaataattccatccctgacggcttcctcaagacgggttcccatg 10395750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 22871339 - 22871478
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  22871339 gcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 22871438  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | |||||| | || ||||||||| ||||||| || |||||    
T  22871439 tcgatgcactcgcagaggattcagctttctcaaacacaat 22871478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 22886398 - 22886537
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  22886398 gcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 22886497  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | |||||| | || ||||||||| ||||||| || |||||    
T  22886498 tcgatgcactcgcagaggattcagctttctcaaacacaat 22886537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 5466778 - 5466672
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  5466778 gcattgataggtgcaacagtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 5466679  T
Q  111 ttgatgc 117  Q
    |||||||    
T  5466678 ttgatgc 5466672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 5596831 - 5596961
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  5596831 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 5596930  T
Q  111 ttgatgcatttgcggaggattcaactttctc 141  Q
    | |||||| | || |||||||||||||||||    
T  5596931 tcgatgcactcgcagaggattcaactttctc 5596961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 7073005 - 7072815
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||||||||||| |||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  7073005 gcattgataggagcaacagtagccatggattgactggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 7072906  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  7072905 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 7072815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 28116422 - 28116612
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  28116422 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 28116521  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | |||||| | |  || |||||| ||||||| || |||||||| || || ||||  ||||| || ||||| || |||||| || |||||||    
T  28116522 tcgatgcactcgtagaagattcagctttctcaaacacaataattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 28116612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 47023246 - 47023056
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  47023246 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 47023147  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||  ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  47023146 tcgatgcattcacagaggattcggctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 47023056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 18224984 - 18224877
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  18224984 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 18224885  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  18224884 tcgatgca 18224877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 5013493 - 5013315
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 122  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || |||||| | |    
T  5013493 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcg 5013394  T
Q  123 cggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
      || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  5013393 tagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 5013315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 6542939 - 6543117
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  6542939 gcattgataggtgcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 6543038  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 189  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||    
T  6543039 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccat 6543117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 4347155 - 4347256
Alignment:
Q  17 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 116  Q
    ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  4347155 ataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 4347254  T
Q  117 ca 118  Q
    ||    
T  4347255 ca 4347256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 28021065 - 28020964
Alignment:
Q  17 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 116  Q
    ||||| |||||||||||||||||||| |||||||| || || |||||||| ||||| ||||| |||||||| || || |||||||| |||||||||||||    
T  28021065 ataggagcaacagtagccatggattgcccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccgttaccatacctctttgatg 28020966  T
Q  117 ca 118  Q
    ||    
T  28020965 ca 28020964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 17985433 - 17985528
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 118  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |||||||||    
T  17985433 gcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctttttgatgca 17985528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 18242520 - 18242381
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  18242520 gcattgataggagcaacggtagccattgattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 18242421  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  18242420 tcgacgcattcacagaggattcagctttctcaaacacaat 18242381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 20577327 - 20577466
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  20577327 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 20577426  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  20577427 tcgacgcattcacagaggattcagctttctcaaacacaat 20577466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 153
Target Start/End: Complemental strand, 7996343 - 7996213
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 122  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| || ||| | |    
T  7996343 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgaggcactcg 7996244  T
Q  123 cggaggattcaactttctcgaatacaataat 153  Q
    | || |||||| ||||||| || ||||||||    
T  7996243 cagaagattcagctttctcaaacacaataat 7996213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 153
Target Start/End: Complemental strand, 10642851 - 10642721
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 122  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| || ||| | |    
T  10642851 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgaggcactcg 10642752  T
Q  123 cggaggattcaactttctcgaatacaataat 153  Q
    | || |||||| ||||||| || ||||||||    
T  10642751 cagaagattcagctttctcaaacacaataat 10642721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 20065845 - 20065739
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| || ||||||||||| ||||| || ||||| |    
T  20065845 tgggctgcattgataggagcaacagtggccatggattgaccggctccagctgacaccatccccacttccgtatctttcttcttgtgatgtccattaccat 20065746  T
Q  105 acctctt 111  Q
    |||||||    
T  20065745 acctctt 20065739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 21674486 - 21674296
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| || || |||||||||| |||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  21674486 gcattgataggagccacggtagccatgggttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 21674387  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  21674386 tcgatgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 21674296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 36997554 - 36997684
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  36997554 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 36997653  T
Q  111 ttgatgcatttgcggaggattcaactttctc 141  Q
    | || |||||| | ||||||||| |||||||    
T  36997654 tcgacgcatttacagaggattcagctttctc 36997684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 51781804 - 51781674
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  51781804 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 51781705  T
Q  111 ttgatgcatttgcggaggattcaactttctc 141  Q
    | || |||||| | ||||||||| |||||||    
T  51781704 tcgacgcatttacagaggattcagctttctc 51781674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 11110826 - 11110965
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| ||||| |||||||| || || || ||||| || ||||    
T  11110826 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccattaccatatctct 11110925  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  11110926 tcgacgcattcacagaggattcagctttctcaaacacaat 11110965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 4416709 - 4416603
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4416709 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 4416610  T
Q  111 ttgatgc 117  Q
    | |||||    
T  4416609 tcgatgc 4416603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 24327952 - 24327822
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  24327952 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 24327853  T
Q  111 ttgatgcatttgcggaggattcaactttctc 141  Q
    | || |||||  | ||||||||| |||||||    
T  24327852 tcgacgcattcacagaggattcagctttctc 24327822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 28339095 - 28338989
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  28339095 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 28338996  T
Q  111 ttgatgc 117  Q
    | |||||    
T  28338995 tcgatgc 28338989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 31964938 - 31965044
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  31964938 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 31965037  T
Q  111 ttgatgc 117  Q
    | |||||    
T  31965038 tcgatgc 31965044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 50134536 - 50134642
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  50134536 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 50134635  T
Q  111 ttgatgc 117  Q
    | |||||    
T  50134636 tcgatgc 50134642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 5609787 - 5609890
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  5609787 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 5609886  T
Q  111 ttga 114  Q
    ||||    
T  5609887 ttga 5609890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 51796893 - 51796762
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatg-accgttaccgtacctc 109  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || ||  || ||||| || |||    
T  51796893 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtgccattaccatatctc 51796794  T
Q  110 tttgatgcatttgcggaggattcaactttctc 141  Q
    || || |||||| | ||||||||| |||||||    
T  51796793 ttcgacgcatttacagaggattcagctttctc 51796762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 29665450 - 29665526
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttctt 87  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| ||||||||||||||    
T  29665450 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttctt 29665526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 48465708 - 48465569
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  48465708 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 48465609  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  48465608 tcgacgcattcacagaggattcagctttctcaaacacaat 48465569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 182; Significance: 1e-98; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 19456821 - 19457022
Alignment:
Q  1 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19456821 taactgggcagcattaataggggcaacagtagccatggattgaccagctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 19456920  T
Q  101 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || ||||||    
T  19456921 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgacagcttcttctaggcgagtccccatggtgaccatct 19457020  T
Q  201 ca 202  Q
    ||    
T  19457021 ca 19457022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 21703564 - 21703765
Alignment:
Q  1 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21703564 taactaggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 21703663  T
Q  101 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatct 200  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  21703664 ccgtatctctttgatgcatttacagaggattcaactttctcgaatacaataatgccttctctgacagcttcttctagacgagtccccatggtgaccatct 21703763  T
Q  201 ca 202  Q
    ||    
T  21703764 ca 21703765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 27434851 - 27435036
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || |||||||| |    
T  27434851 tgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccat 27434950  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatg 190  Q
    ||||||||||||||||  | ||||||||| |||| ||||| ||||| || ||||||||||  |||||||| |||||||| ||||||    
T  27434951 acctctttgatgcattcacagaggattcagctttttcgaacacaatgattccttctctgacggcttcttccagacgagttcccatg 27435036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 27392812 - 27392630
Alignment:
Q  20 ggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcat 119  Q
    ||||||||||||||||  ||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| || |||||||||    
T  27392812 ggggcaacagtagccacagattgactggttccggcagataccatccctacttctgtctctttcttcttatgatgaccattaccatacttccttgatgcat 27392713  T
Q  120 ttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctca 202  Q
    |||| ||||||||| ||||||| || ||||||||||| ||||||| ||| |||||||  || || |||||| || ||||||||    
T  27392712 ttgcagaggattcacctttctcaaacacaataatgccgtctctgacagcctcttctaagcgggttcccatggtgaccatctca 27392630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 23128973 - 23129169
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || |||||||| |    
T  23128973 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccgttaccat 23129072  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||| || |||||||    
T  23129073 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccatggtgaccatctc 23129169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 28882048 - 28881852
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  28882048 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 28881949  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || |||| ||||||||| |||||||| |||||| || |||||||    
T  28881948 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacagcttcttccagacgagttcccatggtgaccatctc 28881852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 20837752 - 20837556
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||| | || ||||| |||||||| |||||||||||||| || || || ||||| |    
T  20837752 tgggctgcattgataggagcaacagtagccatggattgaccggctccgactgacaccattcctacttccgtttctttcttcttgtggtgtccattaccat 20837653  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | | ||||||| |||||||||| ||||| || ||||| ||||  ||||| || |||||||| |||||| || |||||||    
T  20837652 acctctttgatgcattcacagtggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagttcccatggtgaccatctc 20837556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 12655376 - 12655180
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||| | || ||||| |||||||| |||||||||||||| || || || ||||| |    
T  12655376 tgggctgcattgataggagcaacagtagccatggattgaccggctccgactgacaccattcctacttccgtttctttcttcttgtggtgtccattaccat 12655277  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | |||| |||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||| || |||||||    
T  12655276 acctctttgatgcattcacagagggttcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccatggtgaccatctc 12655180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 17 - 201
Target Start/End: Complemental strand, 37374983 - 37374799
Alignment:
Q  17 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 116  Q
    ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  37374983 ataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 37374884  T
Q  117 catttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  37374883 cattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 37374799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 261178 - 261317
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  261178 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 261277  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  261278 tcgatgcattcacagaggattcagctttctcaaacacaat 261317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 34279277 - 34279087
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  34279277 gcattgataggagcaacagtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 34279178  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | || | |||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  34279177 tcgacgtattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 34279087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 12717018 - 12717125
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  12717018 gcattgataggtgcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 12717117  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  12717118 tcgatgca 12717125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 13936957 - 13937096
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  13936957 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 13937056  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  13937057 tcgacgcattcacagaggattcagctttctcaaacacaat 13937096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 21677595 - 21677701
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  21677595 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 21677694  T
Q  111 ttgatgc 117  Q
    | |||||    
T  21677695 tcgatgc 21677701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 12586629 - 12586490
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||| |||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  12586629 gcattgataggagcaacagtagtcatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 12586530  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  12586529 tcgacgcattcacagaggattcagctttctcaaacacaat 12586490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 31876109 - 31876002
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  31876109 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 31876010  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  31876009 tcgatgca 31876002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 34286182 - 34286043
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||| ||||||||||||||||||||  | || |||||||||||||| |||||||||||||| || || || ||||| || ||||    
T  34286182 gcattgataggagcaacagtggccatggattgaccggctccacctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatatctct 34286083  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  34286082 tcgatgcactcacagaggattcagctttctcaaacacaat 34286043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 34291242 - 34291103
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||| ||||||||||||||||||||  | || |||||||||||||| |||||||||||||| || || || ||||| || ||||    
T  34291242 gcattgataggagcaacagtggccatggattgaccggctccacctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatatctct 34291143  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  34291142 tcgatgcactcacagaggattcagctttctcaaacacaat 34291103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 34861508 - 34861401
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  34861508 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 34861409  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  34861408 tcgatgca 34861401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 37686322 - 37686429
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  37686322 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 37686421  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  37686422 tcgatgca 37686429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 37701587 - 37701694
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  37701587 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 37701686  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  37701687 tcgatgca 37701694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 37925321 - 37925182
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  37925321 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 37925222  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  37925221 tcgatgcactcacagaggattcagctttctcaaacacaat 37925182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 39889890 - 39889783
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  39889890 gcattgataggagcaacagtggccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 39889791  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  39889790 tcgatgca 39889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 9350407 - 9350546
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  9350407 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 9350506  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  9350507 tcgacgcattcacagaggattcagctttctcaaacacaat 9350546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 16829763 - 16829858
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 118  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  16829763 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 16829858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 16891718 - 16891623
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 118  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  16891718 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 16891623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 27777035 - 27776896
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27777035 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27776936  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  27776935 tcgacgcattcacagaggattcagctttctcaaacacaat 27776896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 27803520 - 27803381
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27803520 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27803421  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  27803420 tcgacgcattcacagaggattcagctttctcaaacacaat 27803381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 27816802 - 27816663
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27816802 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27816703  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  27816702 tcgacgcattcacagaggattcagctttctcaaacacaat 27816663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 40233327 - 40233188
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  40233327 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 40233228  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  40233227 tcgacgcattcacagaggattcagctttctcaaacacaat 40233188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 11635602 - 11635792
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| | |||||||||||| || || || ||||| |||||||    
T  11635602 gcattgataggagcaacggtagccatggattgaccggctcctgctgacaccatccccacttccgcttctttcttcttgtggtgtccattaccatacctct 11635701  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    |  | ||| | || || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  11635702 tcaacgcactcgcagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 11635792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 11641791 - 11641981
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| | |||||||||||| || || || ||||| |||||||    
T  11641791 gcattgataggagcaacggtagccatggattgaccggctcctgctgacaccatccccacttccgcttctttcttcttgtggtgtccattaccatacctct 11641890  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    |  | ||| | || || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  11641891 tcaacgcactcgcagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 11641981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 19416912 - 19417042
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  19416912 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 19417011  T
Q  111 ttgatgcatttgcggaggattcaactttctc 141  Q
    | || |||||  | ||||||||| |||||||    
T  19417012 tcgacgcattcacagaggattcagctttctc 19417042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 22926441 - 22926547
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  22926441 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 22926540  T
Q  111 ttgatgc 117  Q
    | |||||    
T  22926541 tcgatgc 22926547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 32049614 - 32049526
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 111  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||| ||||| || || || ||||| ||||||||    
T  32049614 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttcttttttcttgtggtgtccattaccatacctctt 32049526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 39052268 - 39052380
Alignment:
Q  38 gattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcggaggattcaactt 137  Q
    |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||| || |||||  | ||||||||| |||    
T  39052268 gattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcattcacagaggattcagctt 39052367  T
Q  138 tctcgaatacaat 150  Q
    |||| || |||||    
T  39052368 tctcaaacacaat 39052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 174; Significance: 8e-94; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 16041169 - 16040980
Alignment:
Q  1 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16041169 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 16041070  T
Q  101 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatg 190  Q
    || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  16041069 ccatacctctttgatgcatttacggaggattcaactttctcgaatacaataatgccttctctgacagcttcttctagacgagttcccatg 16040980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16450295 - 16450496
Alignment:
Q  1 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16450295 taactgggcagcattaataggggcaacagtagctatggattgaccggctccggcagataccatccctacttttgtttctttcttcttatgatgaccgtta 16450394  T
Q  101 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatct 200  Q
    ||||| || |||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  16450395 ccgtatctttttgatgcatttacagaggattcaactttctcgaatacaataatgccttctctgacagcttcttctagacgagtccccatggtgaccatct 16450494  T
Q  201 ca 202  Q
    ||    
T  16450495 ca 16450496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 16518720 - 16518916
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || |||||||| |    
T  16518720 tgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccat 16518819  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||| | ||||||||| |||| ||||| ||||| || ||||||||||  |||||||| |||||||| |||||| || |||||||    
T  16518820 acctctttgatgcatttacagaggattcagctttttcgaacacaatgattccttctctgacggcttcttccagacgagttcccatggtgaccatctc 16518916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 16503684 - 16503880
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || |||||||| |    
T  16503684 tgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccat 16503783  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||| ||||| ||||| || ||||||||||  |||||||| |||||||| |||||| || |||||||    
T  16503784 acctctttgatgcattcacagaggattcagctttttcgaacacaatgattccttctctgacggcttcttccagacgagttcccatggtgaccatctc 16503880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 2154412 - 2154216
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  2154412 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 2154313  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| ||  | || ||||  |||||||| |||||||| |||||| || |||||||    
T  2154312 acctctttgatgcattcacagaggattcagctttctcgaacacaatgatttcatccctgacggcttcttccagacgagttcccatggtgaccatctc 2154216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 10917169 - 10917365
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  10917169 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 10917268  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| ||||||| || ||||| ||  | || || |  |||||||| |||||||| |||||| || |||||||    
T  10917269 acctctttgatgcattcacagaggattcagctttctcaaacacaatgatttcatccctaacggcttcttccagacgagttcccatggtgaccatctc 10917365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 11425087 - 11425276
Alignment:
Q  12 cattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 111  Q
    |||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| ||||||||    
T  11425087 cattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 11425186  T
Q  112 tgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
     ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  11425187 cgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 11425276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 5127825 - 5127635
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  5127825 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 5127726  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||| ||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  5127725 tcgatgcattcacagaggactcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 5127635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 31124744 - 31124554
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| || ||||    
T  31124744 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatatctct 31124645  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | |||||||| || ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  31124644 tcgatgcattcgcagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 31124554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 153
Target Start/End: Complemental strand, 45387176 - 45387034
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  45387176 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 45387077  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataat 153  Q
    | || ||| |||| || |||||| ||||||| || ||||||||    
T  45387076 tcgacgcacttgcagaagattcagctttctcaaacacaataat 45387034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 5147650 - 5147840
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||  ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  5147650 gcattgataggagcaatggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 5147749  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | |||||||| || || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  5147750 tcgatgcattcgcagaagattcagctttctcaaacacaatgatcccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 5147840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 24592851 - 24593041
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  24592851 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 24592950  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | || |||||| | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  24592951 tcgacgcatttacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 24593041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 9618484 - 9618345
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  9618484 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 9618385  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  9618384 tcgatgcactcacagaggattcagctttctcaaacacaat 9618345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 26275404 - 26275511
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  26275404 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 26275503  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  26275504 tcgatgca 26275511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 4145433 - 4145539
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4145433 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 4145532  T
Q  111 ttgatgc 117  Q
    | |||||    
T  4145533 tcgatgc 4145539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 16736770 - 16736960
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  16736770 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 16736869  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | || ||| | || || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  16736870 tcgacgcactcgcagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 16736960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 16751824 - 16752014
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  16751824 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 16751923  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | || ||| | || || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  16751924 tcgacgcactcgcagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 16752014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 17523365 - 17523175
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  17523365 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 17523266  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | || ||| | || || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  17523265 tcgacgcactcgcagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 17523175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 17529850 - 17530040
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  17529850 gcattgataggagcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 17529949  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | || ||| | || || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  17529950 tcgacgcactcgcagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 17530040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 26320179 - 26320284
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  26320179 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 26320278  T
Q  111 ttgatg 116  Q
    | ||||    
T  26320279 tcgatg 26320284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 3445127 - 3445020
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  3445127 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 3445028  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  3445027 tcgatgca 3445020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 11441393 - 11441263
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  11441393 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 11441294  T
Q  111 ttgatgcatttgcggaggattcaactttctc 141  Q
    | || |||||| | ||||||||| |||||||    
T  11441293 tcgacgcatttacagaggattcagctttctc 11441263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 26486054 - 26486161
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  26486054 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 26486153  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  26486154 tcgatgca 26486161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 26670224 - 26670363
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  26670224 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 26670323  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  26670324 tcgatgcactcacagaggattcagctttctcaaacacaat 26670363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 31564709 - 31564816
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  31564709 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 31564808  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  31564809 tcgatgca 31564816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 201
Target Start/End: Complemental strand, 26435084 - 26434900
Alignment:
Q  17 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 116  Q
    ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||| | ||    
T  26435084 ataggagcaacagtggccatggactgaccggctcctgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcggtg 26434985  T
Q  117 catttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    || | |  || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  26434984 cactcgtagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 26434900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 26538183 - 26538322
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  26538183 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 26538282  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  26538283 tcgacgcattcacagaggattcagctttctcaaacacaat 26538322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 174; Significance: 8e-94; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 15227730 - 15227529
Alignment:
Q  1 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15227730 taactgggcagcattaataggggcaacagtagccatggattgaccagctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 15227631  T
Q  101 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatct 200  Q
    || | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  15227630 ccatgcctctttgatgcatttgcggaggattcatctttctcgaatacaataatgccttctctgacagcttcttctagacgagtccccatggtgaccatct 15227531  T
Q  201 ca 202  Q
    ||    
T  15227530 ca 15227529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 15285339 - 15285538
Alignment:
Q  1 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15285339 taactgggcagcattaataggggcaacagtagccatggattgaccagctccggcagataccatccatacttctgtttctttcttcttatgatgaccgtta 15285438  T
Q  101 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatct 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || ||||||    
T  15285439 ccgttcctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgacagcttcttctaggcgagtccccatggtgaccatct 15285538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 1900117 - 1899916
Alignment:
Q  1 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1900117 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgatcgtta 1900018  T
Q  101 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatct 200  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||| ||||||||| | ||||||||||||| || ||||||    
T  1900017 ccgtacctctttgatgcatttacagaggattcaactttctcaaatacaataatgccttctctgacagcttcttccaaacgagtccccatggtgaccatct 1899918  T
Q  201 ca 202  Q
    ||    
T  1899917 ca 1899916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 14235939 - 14236140
Alignment:
Q  1 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 100  Q
    |||||| |||||||||||||||| |||||| ||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  14235939 taactgagcagcattaataggggtaacagtggccatggattgactggttccggcagataccatccctacttctgtctctttcttcttatgatgaccatta 14236038  T
Q  101 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatct 200  Q
    |||||| |||||||||   |||| ||||||||  |||||||||| ||||||||| ||||||||| ||| |||||||  || || |||||| || ||||||    
T  14236039 ccgtacttctttgatgtgcttgcagaggattcccctttctcgaacacaataatgtcttctctgacagcctcttctaagcgggttcccatggtgaccatct 14236138  T
Q  201 ca 202  Q
    ||    
T  14236139 ca 14236140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 14664871 - 14664675
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  14664871 tgggcagcattgataggagcaacagtagccatggattgaccagctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 14664772  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| || |  ||||| || |||||||| |||||| || |||||||    
T  14664771 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctaacggcttcctccagacgagttcccatggtgaccatctc 14664675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 202
Target Start/End: Original strand, 15391771 - 15391948
Alignment:
Q  25 aacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttgcg 124  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||||||||||| || || ||| || |||||||||||||     
T  15391771 aacagtagccatggattgactggttccagcagataccatccctacttctgtctctttcttcttatgatgaccattgccatacttccttgatgcatttgca 15391870  T
Q  125 gaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctca 202  Q
    ||||||||| ||||| | || ||||||||||| ||||||| ||| |||||||  || || |||||| || ||||||||    
T  15391871 gaggattcacctttcccaaacacaataatgccatctctgacagcctcttctaagcgggttcccatggtgaccatctca 15391948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 17013853 - 17013657
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| || || || ||||| |    
T  17013853 tgggctgcattgataggagcaacagtagccatggattgaccagctccggctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 17013754  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||| || |||||||    
T  17013753 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccatggtgaccatctc 17013657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 24592735 - 24592925
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |||||||    
T  24592735 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccatacctct 24592834  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| ||||| || |||||| || |||||||    
T  24592835 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgggttcccatggtgaccatctc 24592925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 14763728 - 14763918
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  14763728 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 14763827  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  14763828 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 14763918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 36344936 - 36345126
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  36344936 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 36345035  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  36345036 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 36345126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 6569700 - 6569510
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  6569700 gcattgataggagcaacagtggccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 6569601  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | |||||||| || ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  6569600 tcgatgcattcgcagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 6569510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 14098388 - 14098198
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  14098388 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 14098289  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | || |||||| | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  14098288 tcgacgcatttacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 14098198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 19373108 - 19372918
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  19373108 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 19373009  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  19373008 tcgatgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 19372918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 31126942 - 31127049
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  31126942 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 31127041  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  31127042 tcgatgca 31127049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 27163753 - 27163931
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 122  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || |||||| | |    
T  27163753 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcg 27163852  T
Q  123 cggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
      || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  27163853 tagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 27163931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 30753589 - 30753482
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || | |||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  30753589 gcattgataggtgcaacagtagccatggattgaccggctccagctgacatcatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 30753490  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  30753489 tcgatgca 30753482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 54833237 - 54833098
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  54833237 gcattgataggagcaacagtggccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 54833138  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  54833137 tcgacgcactcgcagaagattcagctttctcaaacacaat 54833098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 18801046 - 18801176
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| | |||||||||||| || || |||||||| |||||||||||||||||||| || || || ||||| || ||||    
T  18801046 gcattgataggtgcaacagtagccatagcttgaccggctccagctgacaccatccccacttctgtttctttcttcttgtggtgtccattaccatatctct 18801145  T
Q  111 ttgatgcatttgcggaggattcaactttctc 141  Q
    | || |||||  | ||||||||| |||||||    
T  18801146 tcgacgcattcacagaggattcagctttctc 18801176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 33674234 - 33674364
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  33674234 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 33674333  T
Q  111 ttgatgcatttgcggaggattcaactttctc 141  Q
    | || |||||| | ||||||||| |||||||    
T  33674334 tcgacgcatttacagaggattcagctttctc 33674364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 40106062 - 40106240
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || |  ||||||||||| |    
T  40106062 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtctattaccgtaccttt 40106161  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 189  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| ||||||||    
T  40106162 tcgatgcactcgtagaagattcagctttctcaaacacaatgattccatccctgactgcttcctcaagacgggtccccat 40106240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 5005705 - 5005527
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 122  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| || | | | |    
T  5005705 gcaacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgacgtactcg 5005606  T
Q  123 cggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  5005605 cagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 5005527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 21969536 - 21969441
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 118  Q
    |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||| ||||| || || || ||||| |||||||| ||||||    
T  21969536 gcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttcttttttcttgtggtgtccattaccatacctcttcgatgca 21969441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 39850470 - 39850331
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  39850470 gcattgataggtgcaacagtagccattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 39850371  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || | |||  | ||||||||| ||||||| || |||||    
T  39850370 tcgacgtattcacagaggattcagctttctcaaacacaat 39850331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16208439 - 16208640
Alignment:
Q  1 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16208439 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatctctacttctgtttctttcttcttatgatgaccgtta 16208538  T
Q  101 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatct 200  Q
    ||||| ||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  16208539 ccgtaactctttgatgcatttacagaggattcaactttctcaaatacaataatgccttctctgacagcttcttctagacgagtccccatggtgaccatct 16208638  T
Q  201 ca 202  Q
    ||    
T  16208639 ca 16208640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 20460949 - 20460748
Alignment:
Q  1 taactgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgtta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20460949 taactgggcagcattaataggggcaatagtagccatggattgaccggctccggcagataccatccctacttctatttctttcttcttatgatgaccgtta 20460850  T
Q  101 ccgtacctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatct 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||| || ||||||    
T  20460849 ccgtacctctttgatgcattggcggaggattcaactttctcgaatataataatgccttctctgacagcttcttctaggcgagtccccatggtgaccatct 20460750  T
Q  201 ca 202  Q
    ||    
T  20460749 ca 20460748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 41793726 - 41793922
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||||||||||| || || || ||||| |    
T  41793726 tgggctgcattgataggagcaacggtagccatggattgaccggctccagctgataccattcccacttccgtttctttcttcttgtggtgtccattaccat 41793825  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    |||||||||||||| |  | |||| |||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  41793826 acctctttgatgcactcacagaggtttcagctttctcaaacacaatgatcccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 41793922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 10962501 - 10962362
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  10962501 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 10962402  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | ||||||||  | ||||||||| ||||||| || |||||    
T  10962401 tcgatgcattcacagaggattcagctttctcaaacacaat 10962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 51638049 - 51637910
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  51638049 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 51637950  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || ||| |||| || |||||| ||||||| || |||||    
T  51637949 tcgacgcacttgcagaagattcagctttctcaaacacaat 51637910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 28584812 - 28584682
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  28584812 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 28584713  T
Q  111 ttgatgcatttgcggaggattcaactttctc 141  Q
    | || |||||  | ||||||||| |||||||    
T  28584712 tcgacgcattcacagaggattcagctttctc 28584682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 23892053 - 23891855
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  23892053 tgggcagcattaataggagcaacagtagccatggattgatcggctccggcagataccatccctacttctgtttctttcttcttatgatgtccgttaccat 23891954  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctcat 203  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| || |||||||||    
T  23891953 acctctttgatgcattcacggaggattcaactttctcgaatacaataattccttctctgacagcttcttccagacgagtccccatggtgaccatctcat 23891855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 5 - 202
Target Start/End: Complemental strand, 25198879 - 25198682
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  25198879 tgggaagcattaataggagcaacagtagccatggattgaccggctccggcggataccatccctacttctgtttccttcttcttatgatgtccgttaccgt 25198780  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctca 202  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| ||||||||||| || ||||||||    
T  25198779 acctctttgatgcattcacggaggattcaactttctcgaatacaataattccttctctgacagcttcttccagatgagtccccatggtgaccatctca 25198682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 24951955 - 24951761
Alignment:
Q  7 ggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtac 106  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || |||||||| |||    
T  24951955 ggcagcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccatac 24951856  T
Q  107 ctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||  | ||||||||| |||||||||| ||||| || ||||||||||  |||||||| |||||||| |||||| || |||||||    
T  24951855 ctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttctctgacggcttcttccagacgagttcccatggtgaccatctc 24951761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 24688472 - 24688668
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  24688472 tgggctgcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 24688571  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||||||||  |||||||| |||||||| |||||| || |||||||    
T  24688572 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttctctgacggcttcttccagacgagttcccatggtgaccatctc 24688668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 30934483 - 30934287
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| |||||||||| ||||||||| |||||||||| ||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  30934483 tgggctgcattgataggagcaacagtagtcatggattggccggctccggtagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 30934384  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||| || |||||||    
T  30934383 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccatggtgaccatctc 30934287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 23752765 - 23752961
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  23752765 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 23752864  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||| || |||||||    
T  23752865 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccatggtgaccatctc 23752961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 23718303 - 23718500
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  23718303 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 23718402  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagctt-cttctagacgagtccccatgatgtccatctc 201  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||| |||| |||||||| |||||| || |||||||    
T  23718403 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttccttccagacgagttcccatggtgaccatctc 23718500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 11549201 - 11549005
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  11549201 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 11549102  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  11549101 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 11549005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 22999429 - 22999624
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  22999429 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 22999528  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatct 200  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || ||||||    
T  22999529 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatct 22999624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 33777328 - 33777138
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||| ||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  33777328 gcattgataggagcaacagtagccatggattgaccagctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 33777229  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  33777228 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctccagacgggttcccatggtgaccatctc 33777138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 15659081 - 15659271
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  15659081 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 15659180  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  15659181 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 15659271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 40473873 - 40474051
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| |||||||||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||| ||||    
T  40473873 gcattgataggggcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtatctct 40473972  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 189  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || || ||||  |||||||| ||||| || |||||    
T  40473973 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcttcaagacgggttcccat 40474051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 2510898 - 2510753
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||||| || |||||||| || ||||| |||||||||||||| || || || ||||| |    
T  2510898 tgggctgcattgataggagcaacggtagccatggattgaccggctccagctgataccattcccacttccgtttctttcttcttgtggtgtccattaccat 2510799  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    |||||||||||||| |  | ||||||||| ||||||| || |||||    
T  2510798 acctctttgatgcactcacagaggattcagctttctcaaacacaat 2510753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 9317292 - 9317153
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  9317292 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 9317193  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    |||||||| |  | ||||||||| ||||||| || |||||    
T  9317192 ttgatgcactcacagaggattcagctttctcaaacacaat 9317153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 6874143 - 6874004
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  6874143 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 6874044  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    |||||||| |  | ||||||||| ||||||| || |||||    
T  6874043 ttgatgcactcacagaggattcagctttctcaaacacaat 6874004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 12131996 - 12131889
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  12131996 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 12131897  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  12131896 tcgatgca 12131889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 24681278 - 24681171
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  24681278 gcattgataggtgcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 24681179  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  24681178 tcgatgca 24681171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 24723805 - 24723698
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  24723805 gcattgataggtgcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 24723706  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  24723705 tcgatgca 24723698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 37771320 - 37771427
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  37771320 gcattgataggtgcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 37771419  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  37771420 tcgatgca 37771427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 5637751 - 5637561
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  5637751 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 5637652  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | |||||| |  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  5637651 tcgatgcactcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 5637561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 8665796 - 8665902
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  8665796 gcattgataggagcaacagtagccattgattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 8665895  T
Q  111 ttgatgc 117  Q
    | |||||    
T  8665896 tcgatgc 8665902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 153
Target Start/End: Original strand, 15759178 - 15759320
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||| ||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  15759178 gcattgataggagcaacagtagccattgattgacctgctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctct 15759277  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataat 153  Q
    | || ||| |||| || |||||| ||||||| || ||||||||    
T  15759278 tcgacgcacttgcagaagattcagctttctcaaacacaataat 15759320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 18375745 - 18375923
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 122  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || |||||| | |    
T  18375745 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcg 18375844  T
Q  123 cggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
      || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  18375845 tagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 18375923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 30151847 - 30151669
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 122  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || |||||| | |    
T  30151847 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcg 30151748  T
Q  123 cggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
      || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  30151747 tagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 30151669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 37358976 - 37359154
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  37358976 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 37359075  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 189  Q
    | |||||| | |  || |||||| ||||||| |||||||| || || |||||||  ||||| || ||||| || |||||    
T  37359076 tcgatgcactcgtagaagattcagctttctcaaatacaatgatcccatctctgactgcttcctcaagacgggttcccat 37359154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 9548870 - 9549003
Alignment:
Q  17 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 116  Q
    ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  9548870 ataggagcaacagtggccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 9548969  T
Q  117 catttgcggaggattcaactttctcgaatacaat 150  Q
    || |  | ||||||||| ||||||| || |||||    
T  9548970 cactcacagaggattcagctttctcaaacacaat 9549003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 41674544 - 41674420
Alignment:
Q  17 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 116  Q
    ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| || |    
T  41674544 ataggagcaacagtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgacg 41674445  T
Q  117 catttgcggaggattcaactttctc 141  Q
    ||||  | ||||||||  |||||||    
T  41674444 cattcacagaggattcggctttctc 41674420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 18501069 - 18501208
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  18501069 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 18501168  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  18501169 tcgacgcattcacagaggattcagctttctcaaacacaat 18501208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 26480233 - 26480094
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  26480233 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 26480134  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  26480133 tcgatgcactcacagaggattcagctttctcaaacacaat 26480094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 23 - 150
Target Start/End: Complemental strand, 30168298 - 30168171
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 122  Q
    |||| |||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||| |||||| |      
T  30168298 gcaatagtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgatgcactca 30168199  T
Q  123 cggaggattcaactttctcgaatacaat 150  Q
    | ||||||||| ||||||| || |||||    
T  30168198 cagaggattcagctttctcaaacacaat 30168171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 31431269 - 31431130
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||  |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  31431269 gcattgataggagcaacagtagccacagattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 31431170  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  31431169 tcgatgcactcacagaggattcagctttctcaaacacaat 31431130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 31826740 - 31826847
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  31826740 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 31826839  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  31826840 tcgatgca 31826847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 37671813 - 37671920
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  37671813 gcattgataggagcaacggtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 37671912  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  37671913 tcgatgca 37671920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 37754809 - 37754670
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  37754809 gcattgataggtgcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 37754710  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || ||| |||| || |||||| ||||||| || |||||    
T  37754709 tcgacgcacttgcagaagattcagctttctcaaacacaat 37754670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 3789367 - 3789177
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  3789367 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 3789268  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | |||||| |  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  3789267 tcgatgcactcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 3789177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 34616368 - 34616223
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| |||||||||||||| | |||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |    
T  34616368 tgggctgcattgataggtgcaacagtagccatagcttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccat 34616269  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | ||||| |||||| |  | ||||||||| ||||||| || |||||    
T  34616268 atctcttcgatgcactcacagaggattcagctttctcaaacacaat 34616223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 33516185 - 33516090
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 118  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  33516185 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 33516090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 43078090 - 43077900
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| | |||||||||||| |  || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  43078090 gcattgataggtgcaacagtagccatagcttgaccggctccagttgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 43077991  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  43077990 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcgagacgggttcccatggtgaccatctc 43077900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 32599784 - 32599897
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| ||||| |||||||| || || || ||||| |    
T  32599784 tgggctgcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccattaccat 32599883  T
Q  105 acctctttgatgca 118  Q
    ||||||| ||||||    
T  32599884 acctcttcgatgca 32599897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 13325165 - 13325304
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||| ||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  13325165 gcattgataggagcaacggtagccattgattgaccagctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 13325264  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  13325265 tcgatgcactcacagaggattcagctttctcaaacacaat 13325304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 28649055 - 28648937
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 122  Q
    |||||||||||||| | |||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||| || |||||      
T  28649055 gcaacagtagccatagcttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcattca 28648956  T
Q  123 cggaggattcaactttctc 141  Q
    | ||||||||| |||||||    
T  28648955 cagaggattcagctttctc 28648937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 28960120 - 28960226
Alignment:
Q  12 cattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 111  Q
    |||| ||||| |||||||||||| | ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| ||||||||    
T  28960120 cattgataggtgcaacagtagccgttgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctctt 28960219  T
Q  112 tgatgca 118  Q
     ||||||    
T  28960220 cgatgca 28960226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 29967387 - 29967517
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| ||||||||||| || || || || ||||| || ||||    
T  29967387 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttctttttgtggtgtccattaccatatctct 29967486  T
Q  111 ttgatgcatttgcggaggattcaactttctc 141  Q
    | || |||||  | ||||||||| |||||||    
T  29967487 tcgacgcattcacagaggattcagctttctc 29967517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 30029256 - 30029126
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| ||||||||||| || || || || ||||| || ||||    
T  30029256 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttctttttgtggtgtccattaccatatctct 30029157  T
Q  111 ttgatgcatttgcggaggattcaactttctc 141  Q
    | || |||||  | ||||||||| |||||||    
T  30029156 tcgacgcattcacagaggattcagctttctc 30029126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22888324 - 22888287
Alignment:
Q  1 taactgggcagcattaataggggcaacagtagccatgg 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22888324 taactgggcagcattaataggggcaacagtagccatgg 22888287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 3e-62; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 16283287 - 16283091
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || |||||||| |    
T  16283287 tgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccat 16283188  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||||||||| || ||||||||||  |||||||| |||||||| |||||| || |||||||    
T  16283187 acctctttgatgcattcacagaggattcagctttctcgaatacaatgattccttctctgacggcttcttccagacgagttcccatggtgaccatctc 16283091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 19687936 - 19687740
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| || || || ||||| |    
T  19687936 tgggcagcattgataggagcaacagtagccatggattgaccggctccggctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 19687837  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| ||||| || |||||| || |||||||    
T  19687836 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgggttcccatggtgaccatctc 19687740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 8 - 202
Target Start/End: Original strand, 22081252 - 22081446
Alignment:
Q  8 gcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacc 107  Q
    |||||||| || ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||| || || |||     
T  22081252 gcagcattgatgggggcaacagtagccatggattgactggttccggcagataccatccctacttctgtctctttcttcttatgatgaccattgccatact 22081351  T
Q  108 tctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctca 202  Q
    || ||||||||||||| |||||||||  ||| || || ||||||||||| ||||||| ||| |||||||  || || |||||| || ||||||||    
T  22081352 tccttgatgcatttgcagaggattcacatttttcaaacacaataatgccatctctgacagcctcttctaagcgggttcccatggtgaccatctca 22081446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 16277392 - 16277196
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  16277392 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 16277293  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||| || |||||||    
T  16277292 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccatggtgaccatctc 16277196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 14557465 - 14557269
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| || |||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  14557465 tgggctgcattgataggagcgacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 14557366  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||| || |||||||    
T  14557365 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccatggtgaccatctc 14557269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 2137636 - 2137832
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  2137636 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 2137735  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || | ||| ||||  ||||| || ||||| || |||||| || |||||||    
T  2137736 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattcattccctgacggcttcctccagacgggttcccatggtgaccatctc 2137832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 27609282 - 27609478
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  27609282 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 27609381  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||  |||||||||| ||||| || || || ||||  ||||| || |||||||| |||||| || |||||||    
T  27609382 acctctttgatgcattcacagaggattcggctttctcgaacacaatgattccatccctgacggcttcctccagacgagttcccatggtgaccatctc 27609478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 18710418 - 18710228
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  18710418 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 18710319  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  18710318 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 18710228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 19674270 - 19674080
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||||||||||| |||||| || || |||||||| || || |||||||||||||| ||||| || ||||| |||||||    
T  19674270 gcattgataggagcaacggtagccatggattgactggctccagctgacaccatccccacgtccgtttctttcttcttgtgatgtccattaccatacctct 19674171  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | || ||| | || || |||||| |||||||||| |||||||| || || ||||  ||||| || ||||| || |||||| || |||||||    
T  19674170 tcgacgcactcgcagaagattcagctttctcgaacacaataattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 19674080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 31490133 - 31490263
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| |||||||||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  31490133 gcattgataggggcaacagtagccattgattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatatctct 31490232  T
Q  111 ttgatgcatttgcggaggattcaactttctc 141  Q
    | || |||||  | ||||||||| |||||||    
T  31490233 tcgacgcattcacagaggattcagctttctc 31490263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 31354362 - 31354250
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||| || |||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |    
T  31354362 tgggctgcattgataggagcaacggtggccatggattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccat 31354263  T
Q  105 acctctttgatgc 117  Q
    ||||||| |||||    
T  31354262 acctcttcgatgc 31354250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 19208743 - 19208850
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||| |||    
T  19208743 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacttct 19208842  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  19208843 tcgatgca 19208850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 19286297 - 19286158
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  19286297 gcattgataggagcaacagtggccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 19286198  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || ||| | || || |||||| ||||||| || |||||    
T  19286197 tcgacgcactcgcagaagattcagctttctcaaacacaat 19286158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 23 - 150
Target Start/End: Original strand, 28362350 - 28362477
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 122  Q
    ||||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| || ||||| |||||| |      
T  28362350 gcaacggtagccatggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgatgcactca 28362449  T
Q  123 cggaggattcaactttctcgaatacaat 150  Q
    | ||||||||| ||||||| || |||||    
T  28362450 cagaggattcagctttctcaaacacaat 28362477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 3329902 - 3330080
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||  |||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  3329902 gcattgataggagcaacgatagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 3330001  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 189  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || |||||||| |||||    
T  3330002 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgagttcccat 3330080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 29829145 - 29828967
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  29829145 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 29829046  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 189  Q
    | || |||||  | ||||||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||    
T  29829045 tcgacgcattcacagaggattcagctttctcaaacacaatgattccatctctgacggcttcctcaagacgggttcccat 29828967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 19518526 - 19518665
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  19518526 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 19518625  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  19518626 tcgacgcattcacagaggattcagctttctcaaacacaat 19518665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 33258555 - 33258425
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  33258555 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgcccattaccatatctct 33258456  T
Q  111 ttgatgcatttgcggaggattcaactttctc 141  Q
    | || |||||  | ||||||||| |||||||    
T  33258455 tcgacgcattcacagaggattcagctttctc 33258425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 12093116 - 12093306
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||| ||||||||| ||||| |||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  12093116 gcattgataggagcaatagtagccatagattggccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 12093215  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||| || |||||||    
T  12093216 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccatggtgaccatctc 12093306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 109; Significance: 5e-55; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 29601 - 29405
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || |||||||| |    
T  29601 tgggcagcattaataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccat 29502  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||| ||||| ||||| || ||||| ||||  |||||||| |||||||| |||||| || |||||||    
T  29501 acctctttgatgcattcacagaggattcagctttttcgaacacaatgattccttccctgacggcttcttccagacgagttcccatggtgaccatctc 29405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 40487 - 40683
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || || |||||||| |    
T  40487 tgggctgcattgataggagcaacagtagccatggattgaccggctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccat 40586  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || |||||||| |||||| || |||||||    
T  40587 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagttcccatggtgaccatctc 40683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 47403 - 47599
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||| | |||||||||||||||| |||||||||||| || || |||||||||| ||| |||||||||||||| || || || ||||| |    
T  47403 tgggctgcattgataagagcaacagtagccatgggttgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccat 47502  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  ||||||||||| |||||||||| ||||| || || || ||||  |||||||| ||||| || |||||| || |||||||    
T  47503 acctctttgatgcattcacggaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgggttcccatggtgaccatctc 47599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 21400 - 21208
Alignment:
Q  10 agcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctc 109  Q
    |||||| || |||||||||||||||| |||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| ||    
T  21400 agcattgatgggggcaacagtagccacggattgactggttccggcagataccatccctacttctgtctctttcttcttatgatgaccattaccatacttc 21301  T
Q  110 tttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctca 202  Q
     ||||||||||||| ||||||||| ||||||| || |||||||| || ||||||| ||| |||||||  || || |||||| || ||||||||    
T  21300 cttgatgcatttgcagaggattcacctttctcaaacacaataattccgtctctgacagcctcttctaagcgggttcccatggtgaccatctca 21208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 27130 - 26934
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  27130 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 27031  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||| || |||||||    
T  27030 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccatggtgaccatctc 26934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 4e-43; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 13299312 - 13299508
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| || || || ||||| |    
T  13299312 tgggctgcattgataggagcaacagtagccatggattgaccagctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 13299411  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||| || |||||||    
T  13299412 atctctttgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccatggtgaccatctc 13299508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 22935238 - 22935434
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| |||||||||| ||||||||||||||| ||||| || |||||||||| ||| |||||||||||||| || || |||||||| |    
T  22935238 tgggctgcattgataggagcaacagtagtcatggattgaccggccccggctgacaccatccctatttccgtttctttcttcttgtggtgtccgttaccat 22935337  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||| || |||||||    
T  22935338 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccatggtgaccatctc 22935434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 23857683 - 23857879
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| |||||||||| ||||||||||||||| ||||| || |||||||||| ||| |||||||||||||| || || |||||||| |    
T  23857683 tgggctgcattgataggagcaacagtagtcatggattgaccggccccggctgacaccatccctatttccgtttctttcttcttgtggtgtccgttaccat 23857782  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  |||||||| |||||||| |||||| || |||||||    
T  23857783 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcttccagacgagttcccatggtgaccatctc 23857879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 24863552 - 24863356
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| || || || ||||| |    
T  24863552 tgggctgcattgataggagcaacagtagccatggattgaccggctccggctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 24863453  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || |||||||| | |||| || |||||||    
T  24863452 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagttctcatggtgaccatctc 24863356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 20160534 - 20160345
Alignment:
Q  10 agcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctc 109  Q
    |||||||| ||||||||||||||||||||||||||||||    ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  20160534 agcattaacaggggcaacagtagccatggattgaccggca---gcaaattccatccctacttctgtttccttcttcttatgatgaccgttaccgtacctt 20160438  T
Q  110 tttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctca 202  Q
    |||| |||  |  ||||||||||| |||| || || ||||| || ||||| |||| ||||||||||||||| || |||||| || ||||||||    
T  20160437 tttggtgcgctcacggaggattcacctttatcaaacacaatgattccttccctgacagcttcttctagacgggttcccatggtgaccatctca 20160345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 10 - 202
Target Start/End: Original strand, 22172297 - 22172486
Alignment:
Q  10 agcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctc 109  Q
    |||||||| ||||||||||||||||||||||||||||||    ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  22172297 agcattaacaggggcaacagtagccatggattgaccggca---gcaaattccatccctacttctgtttccttcttcttatgatgaccgttaccgtacctt 22172393  T
Q  110 tttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctca 202  Q
    |||| |||  |  ||||||||||| |||| || || ||||| || ||||| |||| ||||||||||||||| || |||||| || ||||||||    
T  22172394 tttggtgcgctcacggaggattcacctttatcaaacacaatgattccttccctgacagcttcttctagacgggttcccatggtgaccatctca 22172486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 15424678 - 15424874
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  15424678 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 15424777  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | || |||||| |||||||||| ||||| || ||||| ||||  ||||| || |||||||| |||||| || |||||||    
T  15424778 acctctttgatgcattcacagaagattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgagttcccatggtgaccatctc 15424874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 26988836 - 26988640
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  26988836 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 26988737  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||| ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| |||||||| |||||| || |||||||    
T  26988736 acctcttcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgagttcccatggtgaccatctc 26988640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 26999908 - 26999712
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  26999908 tgggctgcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 26999809  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||| || ||||| ||||  ||||| || ||||| || |||||| || |||||||    
T  26999808 acctctttgatgcattcacagaggattcagctttctcgaacacaatgattccttccctgacggcttcctccagacgggttcccatggtgaccatctc 26999712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 24304979 - 24305124
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |    
T  24304979 tgggcagcattgataggagcgacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccat 24305078  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    ||||||||||||||||  | ||||||||| |||||||||| |||||    
T  24305079 acctctttgatgcattcacagaggattcagctttctcgaacacaat 24305124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 26918209 - 26918070
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  26918209 gcattgataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 26918110  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | ||||||||  | ||||||||| |||||||||| |||||    
T  26918109 tcgatgcattcacagaggattcagctttctcgaacacaat 26918070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 201
Target Start/End: Complemental strand, 16749677 - 16749493
Alignment:
Q  17 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 116  Q
    ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  16749677 ataggagcaacagtagccatggattgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 16749578  T
Q  117 catttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    || |  | ||||||||| |||||||||| ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  16749577 cactcacagaggattcagctttctcgaacacaatgatcccatccctgacggcttcctccagacgggttcccatggtgaccatctc 16749493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 29549307 - 29549117
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| ||||| || ||||| |||||||    
T  29549307 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtgatgtccattaccatacctct 29549208  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | |||||| |  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  29549207 tcgatgcactcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 29549117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 27044225 - 27044029
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |    
T  27044225 tgggctgcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccat 27044126  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||| |||||| |  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  27044125 atctcttcgatgcactcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 27044029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 3695892 - 3695702
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  3695892 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 3695793  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  3695792 tcgatgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 3695702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 17025097 - 17024901
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgt 104  Q
    ||||| ||||| ||||| |||||||||||||| | |||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| |    
T  17025097 tgggctgcattgataggagcaacagtagccatagcttgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccat 17024998  T
Q  105 acctctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    ||||||| ||||||||  | ||||||||  ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  17024997 acctcttcgatgcattcacagaggattcggctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 17024901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 4525118 - 4525011
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4525118 gcattgataggtgcaacagtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 4525019  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  4525018 tcgatgca 4525011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 4757590 - 4757483
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| || ||||||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  4757590 gcattgataggagcgacagtagccattgattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 4757491  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  4757490 tcgatgca 4757483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 4772826 - 4772687
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  4772826 gcattgataggagcaacggtagccatagattgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 4772727  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  4772726 tcgatgcactcacagaggattcagctttctcaaacacaat 4772687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 27007541 - 27007402
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27007541 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27007442  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  27007441 tcgatgcactcacagaggattcagctttctcaaacacaat 27007402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 27484946 - 27484807
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||| ||||    
T  27484946 gcattgataggagcaacggtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtatctct 27484847  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | |||||| |  | ||||||||| ||||||| || |||||    
T  27484846 tcgatgcactcacagaggattcagctttctcaaacacaat 27484807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 29572842 - 29572735
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||||||||| |    
T  29572842 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttt 29572743  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  29572742 tcgatgca 29572735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 29501235 - 29501096
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  29501235 gcattgataggagcaacggtagccatggattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 29501136  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  |  |||||||| ||||||| || |||||    
T  29501135 tcgacgcattcacaaaggattcagctttctcaaacacaat 29501096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 30558395 - 30558490
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgca 118  Q
    ||||| ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||||    
T  30558395 gcaacggtagccatggattgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgca 30558490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 34463728 - 34463867
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||| ||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  34463728 gcattgataggagcaacagtagtcattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 34463827  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  34463828 tcgacgcattcacagaggattcagctttctcaaacacaat 34463867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 4546151 - 4546341
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  4546151 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 4546250  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||| || |||||||    
T  4546251 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccatggtgaccatctc 4546341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 16944394 - 16944524
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  16944394 gcattgataggagcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 16944493  T
Q  111 ttgatgcatttgcggaggattcaactttctc 141  Q
    | || |||||  | ||||||||| |||||||    
T  16944494 tcgacgcattcacagaggattcagctttctc 16944524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 28207271 - 28207081
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  28207271 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 28207172  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||| || |||||||    
T  28207171 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccatggtgaccatctc 28207081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 26778000 - 26778100
Alignment:
Q  17 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 116  Q
    ||||| |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| |||||||| ||||    
T  26778000 ataggtgcaacagtagccattgattgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatg 26778099  T
Q  117 c 117  Q
    |    
T  26778100 c 26778100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 27360377 - 27360484
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27360377 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27360476  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  27360477 tcgatgca 27360484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 27450720 - 27450827
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  27450720 gcattgataggagcaacggtagccatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 27450819  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  27450820 tcgatgca 27450827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 16673956 - 16673817
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||||||||| || || || ||||| || ||||    
T  16673956 gcattgataggagcaacggtagctattgattgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctct 16673857  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    | || |||||  | ||||||||| ||||||| || |||||    
T  16673856 tcgacgcattcacagaggattcagctttctcaaacacaat 16673817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 4724510 - 4724688
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| ||||| |    
T  4724510 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccataccttt 4724609  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 189  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||    
T  4724610 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccat 4724688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 26116792 - 26116893
Alignment:
Q  17 ataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatg 116  Q
    ||||| ||||| ||||| || |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||| ||||    
T  26116792 ataggagcaacggtagctatagattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgatg 26116891  T
Q  117 ca 118  Q
    ||    
T  26116892 ca 26116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 22477634 - 22477673
Alignment:
Q  5 tgggcagcattaataggggcaacagtagccatggattgac 44  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  22477634 tgggcagcattaattggggcaacagtagccatggattgac 22477673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 189
Target Start/End: Original strand, 27272947 - 27273128
Alignment:
Q  8 gcagcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacc 107  Q
    |||||||||| |||||| ||||||||  | |  ||||| ||||| |  |||||||| || || |||||||| |||||||| || || || || || ||||    
T  27272947 gcagcattaacaggggcgacagtagctgtagtctgacctgctccagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacc 27273046  T
Q  108 tctttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 189  Q
    ||||  |  ||||||  || || ||| | ||||| |||||||| || ||||| ||||  ||||| |||||||||||||||||    
T  27273047 tcttcaacccatttgtagaagactcacccttctcaaatacaatgataccttccctgacggcttcctctagacgagtccccat 27273128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 27630077 - 27630254
Alignment:
Q  12 cattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctt 111  Q
    |||||| |||||| ||||||||| | || ||||| ||||| |  |||||||| || || |||||||| |||||||| || || || || || ||||||||    
T  27630077 cattaacaggggcgacagtagccgtagactgacctgctcccgaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 27630176  T
Q  112 tgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccat 189  Q
     ||  || |||  || || ||| | ||||| |||||||| || || |||||||  || || |||||||||||||||||    
T  27630177 cgacccacttgtagaagactcacccttctcaaatacaatgataccctctctgacggcctcctctagacgagtccccat 27630254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 554 - 744
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |  || |||||||||||||| |||||||||||||| || || || ||||| |||||||    
T  554 gcattgataggagcaacagtagccatggattgaccggctccagttgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctct 653  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| |||||||||| ||||| || || || ||||  |||||||| ||||| || |||||| || |||||||    
T  654 tcgatgcattcacagaggattcagctttctcgaacacaatgattccatccctgacggcttcttccagacgggttcccatggtgaccatctc 744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 8064 - 7874
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||  |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||| |||||||    
T  8064 gcattgataggagcaacagtagccacagattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatacctct 7965  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | ||||||||  | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  7964 tcgatgcattcacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 7874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 48568 - 48769
Alignment:
Q  7 ggcagcattaataggggcaacag-tagccatggattga--ccggctccggca-gataccatccc-tacttctgtttctttcttcttatgatgacc-gtta 100  Q
    ||||||||| ||||| ||||||| |||||||||||||   |||||||||||| || |||||||| |||||| |||||||||||||| || || || ||||    
T  48568 ggcagcattgataggagcaacaggtagccatggattggacccggctccggcaagacaccatcccctacttccgtttctttcttcttgtggtgtcccgtta 48667  T
Q  101 ccgtacctcttt-gatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatc 199  Q
    || ||||||||| ||||||||  | ||||||||| |||||||||| ||||| || ||||||||||  |||||||| |||||||| |||||| || |||||    
T  48668 ccatacctcttttgatgcattcacagaggattcagctttctcgaacacaatgattccttctctgacggcttcttccagacgagttcccatggtgaccatc 48767  T
Q  200 tc 201  Q
    ||    
T  48768 tc 48769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 26626 - 26816
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  26626 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 26725  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | || |||||| | ||||||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  26726 tcgacgcatttacagaggattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 26816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 7663 - 7770
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || |||||||||||||    
T  7663 gcattgataggagcaacagtagccattgattgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctct 7762  T
Q  111 ttgatgca 118  Q
    | ||||||    
T  7763 tcgatgca 7770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 15366 - 15544
Alignment:
Q  23 gcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctctttgatgcatttg 122  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||||||| || |||||| | |    
T  15366 gcaacagtagccattgattgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcg 15465  T
Q  123 cggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
      || |||||| ||||||| || ||||| || || || ||||  ||||| || ||||| || |||||| || |||||||    
T  15466 tagaagattcagctttctcaaacacaatgattccatccctgacggcttcctcaagacgggttcccatggtgaccatctc 15544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 7769 - 7579
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||    
T  7769 gcattgataggagcaacggtagccatagattgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctct 7670  T
Q  111 ttgatgcatttgcggaggattcaactttctcgaatacaataatgccttctctgatagcttcttctagacgagtccccatgatgtccatctc 201  Q
    | |||||| | |  || |||||| ||||||| || ||||| || || |||||||  ||||| || ||||| || |||||| || |||||||    
T  7669 tcgatgcactcgtagaagattcagctttctcaaacacaatgatcccatctctgactgcttcctcaagacgggttcccatggtgaccatctc 7579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 9490 - 9593
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctct 110  Q
    ||||| ||||| || || ||||||||||||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || ||||    
T  9490 gcattgataggagcgacggtagccatggattgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctct 9589  T
Q  111 ttga 114  Q
    ||||    
T  9590 ttga 9593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 5821 - 5682
Alignment:
Q  11 gcattaataggggcaacagtagccatg-gattgaccggctccggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccgtacctc 109  Q
    ||||| ||||| ||||||||||||||  |||||||||||||| || || |||||||| ||||| |||||||||||||| || || || ||||| || |||    
T  5821 gcattgataggagcaacagtagccatttgattgaccggctccagctgacaccatccc-acttccgtttctttcttcttgtggtgtccattaccatatctc 5723  T
Q  110 tttgatgcatttgcggaggattcaactttctcgaatacaat 150  Q
    || || |||||  | ||||||||| ||||||| || |||||    
T  5722 ttcgacgcattcacagaggattcagctttctcaaacacaat 5682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0496 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 157 - 197
Alignment:
Q  11 gcattaataggggcaacagtagccatggattgaccggctcc 51  Q
    ||||| ||||| |||||||||||||| ||||||||||||||    
T  157 gcattgataggtgcaacagtagccattgattgaccggctcc 197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University