View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6868A_low_37 (Length: 395)
Name: NF6868A_low_37
Description: NF6868A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6868A_low_37 |
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Alignment Details
Target: chr1 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 10 - 389
Target Start/End: Complemental strand, 7440845 - 7440462
Alignment:
| Q |
10 |
ggtgttaaaaacaatatatatagtattactgctatgattcagttaacaatattacctctgatgagccataatacaaccggcccttgccttctttaatgtt |
109 |
Q |
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| T |
7440845 |
ggtgttacaaacaatatatataatattactactatgattcagttaacaatattacctctgatgagccatactactaccgccccttgccttatttaatgtc |
7440746 |
T |
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| Q |
110 |
ttgaatatattaggtatactttaacaacttagaaatcaaaattaaagataatttataacgcttgatttcctcaattcactctagccatt----taacaaa |
205 |
Q |
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| T |
7440745 |
ttgcatatattaggtaaactttaacaacttagaaatcaaaattaaagataatttataacacttgatttcctcaattcactctagccattaatttaacaaa |
7440646 |
T |
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| Q |
206 |
gaagaaaattgtgatgacttataaaggagtcaaagcaatcaatacctaaacatgttttaaatcaaacttgatatcaaaacattggtgctagaaggaggat |
305 |
Q |
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| T |
7440645 |
gaagaaaattgtgatgacttataaaggagtcaaagcaatcaatacctaaacatgttttaaatcaaacttgatatcaaaacattggtgctagaaggaggat |
7440546 |
T |
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| Q |
306 |
tgagggcaaatgaaccttctaacacctaaatatctttgattgtggggtacgattccattacaaaagaaagtctaacagtcttag |
389 |
Q |
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| T |
7440545 |
tgagggcaaatgaaccttttagcacctaaatatctttgattgtggggtacgattccattacaaaagaaagtataacagtcttag |
7440462 |
T |
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