View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6869A_high_2 (Length: 503)

Name: NF6869A_high_2
Description: NF6869A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6869A_high_2
NF6869A_high_2
[»] chr7 (38 HSPs)
chr7 (7-241)||(7915435-7915676)
chr7 (237-409)||(7915724-7915896)
chr7 (430-495)||(15329273-15329338)
chr7 (430-495)||(48880927-48880992)
chr7 (430-495)||(3961979-3962044)
chr7 (430-495)||(4974735-4974800)
chr7 (430-495)||(15577850-15577915)
chr7 (430-495)||(42611811-42611876)
chr7 (430-495)||(45637712-45637777)
chr7 (55-201)||(8364352-8364492)
chr7 (430-493)||(24394972-24395035)
chr7 (148-230)||(8442530-8442612)
chr7 (430-495)||(20010098-20010162)
chr7 (430-495)||(34482835-34482900)
chr7 (430-495)||(35444558-35444623)
chr7 (55-201)||(8348336-8348481)
chr7 (429-495)||(25167850-25167916)
chr7 (287-388)||(8409535-8409636)
chr7 (258-319)||(8448293-8448354)
chr7 (430-495)||(37477080-37477145)
chr7 (287-384)||(8411016-8411113)
chr7 (430-495)||(15238382-15238447)
chr7 (430-495)||(18036978-18037043)
chr7 (433-494)||(36790467-36790528)
chr7 (429-495)||(29737138-29737204)
chr7 (57-98)||(8442654-8442695)
chr7 (434-495)||(25167655-25167715)
chr7 (434-495)||(35445603-35445663)
chr7 (430-495)||(42696083-42696148)
chr7 (434-495)||(48880726-48880786)
chr7 (434-496)||(36790275-36790337)
chr7 (11-48)||(8348499-8348536)
chr7 (322-387)||(8354614-8354679)
chr7 (254-303)||(8354683-8354732)
chr7 (442-495)||(20009905-20009958)
chr7 (458-495)||(30848597-30848634)
chr7 (434-495)||(30848775-30848835)
chr7 (254-330)||(8453908-8453984)
[»] scaffold0178 (1 HSPs)
scaffold0178 (430-495)||(11621-11686)
[»] chr3 (47 HSPs)
chr3 (430-495)||(6041884-6041949)
chr3 (430-495)||(2754717-2754782)
chr3 (430-495)||(3574527-3574592)
chr3 (430-495)||(37217053-37217118)
chr3 (430-494)||(11347268-11347332)
chr3 (430-495)||(42297353-42297419)
chr3 (430-495)||(3137414-3137479)
chr3 (430-495)||(3456064-3456129)
chr3 (430-495)||(30385011-30385076)
chr3 (430-495)||(33113793-33113858)
chr3 (430-495)||(37522053-37522118)
chr3 (430-495)||(48160905-48160970)
chr3 (429-495)||(19650900-19650966)
chr3 (430-495)||(34482910-34482975)
chr3 (431-495)||(9797029-9797093)
chr3 (429-495)||(8320584-8320650)
chr3 (430-495)||(22426344-22426409)
chr3 (430-495)||(33145713-33145777)
chr3 (441-491)||(42921154-42921204)
chr3 (430-495)||(33839531-33839596)
chr3 (430-495)||(36865027-36865092)
chr3 (434-495)||(40328037-40328098)
chr3 (439-495)||(33839741-33839797)
chr3 (429-484)||(41224232-41224287)
chr3 (430-495)||(8362045-8362110)
chr3 (430-495)||(24343547-24343612)
chr3 (434-495)||(36864831-36864892)
chr3 (442-494)||(47738117-47738169)
chr3 (430-493)||(26612785-26612848)
chr3 (433-467)||(40327878-40327912)
chr3 (434-495)||(3137213-3137273)
chr3 (434-495)||(8361838-8361898)
chr3 (434-495)||(33145918-33145978)
chr3 (434-495)||(34482687-34482747)
chr3 (442-495)||(47738317-47738370)
chr3 (430-461)||(47402630-47402661)
chr3 (434-487)||(3456278-3456330)
chr3 (434-495)||(3574325-3574385)
chr3 (434-495)||(9796828-9796888)
chr3 (434-495)||(19650699-19650759)
chr3 (434-495)||(22426144-22426204)
chr3 (434-495)||(30385606-30385666)
chr3 (434-495)||(33114000-33114060)
chr3 (434-495)||(37522259-37522319)
chr3 (434-495)||(41224440-41224500)
chr3 (458-495)||(41883223-41883260)
chr3 (442-495)||(46919100-46919153)
[»] chr8 (52 HSPs)
chr8 (430-495)||(26042116-26042181)
chr8 (430-495)||(32064745-32064810)
chr8 (430-495)||(34665382-34665447)
chr8 (430-495)||(17841850-17841915)
chr8 (430-495)||(20091801-20091866)
chr8 (430-495)||(24211553-24211618)
chr8 (430-495)||(32393858-32393923)
chr8 (430-495)||(40780129-40780194)
chr8 (430-495)||(42755042-42755107)
chr8 (430-494)||(15187560-15187624)
chr8 (433-495)||(8453837-8453899)
chr8 (430-495)||(1645965-1646030)
chr8 (430-495)||(35353041-35353106)
chr8 (438-495)||(38016979-38017036)
chr8 (431-495)||(14128865-14128929)
chr8 (430-495)||(31347782-31347847)
chr8 (434-495)||(37986055-37986116)
chr8 (430-495)||(39772801-39772866)
chr8 (430-495)||(6108233-6108298)
chr8 (430-495)||(7017865-7017930)
chr8 (430-495)||(37132658-37132723)
chr8 (431-495)||(27782117-27782181)
chr8 (429-495)||(30835047-30835112)
chr8 (430-495)||(41819778-41819843)
chr8 (435-495)||(25581239-25581299)
chr8 (440-495)||(7021988-7022043)
chr8 (430-484)||(27835464-27835518)
chr8 (434-495)||(3890413-3890474)
chr8 (434-495)||(6108032-6108092)
chr8 (434-487)||(24844866-24844919)
chr8 (434-495)||(37132479-37132540)
chr8 (442-493)||(30834862-30834913)
chr8 (434-495)||(1503642-1503702)
chr8 (434-495)||(17841649-17841709)
chr8 (434-495)||(25581038-25581098)
chr8 (434-495)||(26041912-26041972)
chr8 (434-495)||(32064952-32065012)
chr8 (434-499)||(38017135-38017199)
chr8 (434-495)||(40779928-40779988)
chr8 (430-474)||(30055543-30055587)
chr8 (442-493)||(1886621-1886672)
chr8 (441-495)||(35353247-35353300)
chr8 (458-495)||(3817930-3817967)
chr8 (458-495)||(3890616-3890653)
chr8 (434-495)||(10044554-10044614)
chr8 (434-495)||(14129065-14129125)
chr8 (434-495)||(20091600-20091660)
chr8 (434-495)||(30055722-30055782)
chr8 (434-495)||(31347575-31347635)
chr8 (434-495)||(34665587-34665647)
chr8 (434-495)||(37985855-37985915)
chr8 (458-494)||(3597042-3597078)
[»] chr6 (23 HSPs)
chr6 (430-495)||(17176021-17176086)
chr6 (430-495)||(17705465-17705530)
chr6 (430-495)||(33695327-33695392)
chr6 (430-495)||(33696696-33696761)
chr6 (430-495)||(6127275-6127340)
chr6 (430-495)||(18365573-18365638)
chr6 (430-495)||(18370837-18370902)
chr6 (430-495)||(23291084-23291149)
chr6 (430-495)||(28675148-28675213)
chr6 (429-495)||(25986929-25986995)
chr6 (430-495)||(6031741-6031806)
chr6 (430-494)||(18889698-18889761)
chr6 (436-495)||(11548588-11548647)
chr6 (433-495)||(8515725-8515787)
chr6 (429-495)||(32702206-32702270)
chr6 (434-495)||(34238886-34238946)
chr6 (434-494)||(29693652-29693712)
chr6 (434-494)||(32702412-32702471)
chr6 (430-495)||(2309423-2309488)
chr6 (430-495)||(9752245-9752309)
chr6 (434-495)||(17705268-17705328)
chr6 (434-495)||(28675354-28675414)
chr6 (458-495)||(29693478-29693515)
[»] chr4 (42 HSPs)
chr4 (430-495)||(10442789-10442854)
chr4 (430-495)||(22199261-22199326)
chr4 (430-495)||(31078819-31078884)
chr4 (430-495)||(49387888-49387953)
chr4 (430-493)||(36072947-36073010)
chr4 (430-495)||(2624837-2624902)
chr4 (430-495)||(21802322-21802387)
chr4 (430-495)||(24128239-24128304)
chr4 (430-495)||(33530688-33530753)
chr4 (430-495)||(47290066-47290131)
chr4 (431-495)||(7745112-7745176)
chr4 (430-493)||(4751446-4751509)
chr4 (430-495)||(24392667-24392732)
chr4 (434-495)||(36073354-36073415)
chr4 (430-495)||(44893426-44893491)
chr4 (430-495)||(53123030-53123096)
chr4 (430-495)||(23964465-23964530)
chr4 (430-495)||(46441844-46441909)
chr4 (430-495)||(50156578-50156643)
chr4 (430-484)||(37934952-37935006)
chr4 (430-495)||(44893213-44893279)
chr4 (436-495)||(42671675-42671734)
chr4 (434-495)||(11314050-11314111)
chr4 (434-495)||(25063373-25063434)
chr4 (442-495)||(42671874-42671927)
chr4 (458-495)||(9088898-9088935)
chr4 (434-495)||(9089076-9089136)
chr4 (434-495)||(21802119-21802179)
chr4 (434-495)||(36073555-36073615)
chr4 (442-495)||(37219837-37219890)
chr4 (434-495)||(46442050-46442110)
chr4 (442-495)||(50156386-50156438)
chr4 (434-495)||(53123237-53123297)
chr4 (434-494)||(17655637-17655697)
chr4 (434-494)||(24128446-24128505)
chr4 (443-495)||(36073743-36073795)
chr4 (434-484)||(47290283-47290332)
chr4 (434-495)||(10442586-10442646)
chr4 (462-495)||(17655462-17655495)
chr4 (434-495)||(31078618-31078678)
chr4 (434-495)||(44893012-44893072)
chr4 (434-495)||(44893632-44893692)
[»] chr1 (37 HSPs)
chr1 (430-495)||(40214988-40215053)
chr1 (430-495)||(9910293-9910358)
chr1 (434-495)||(16045798-16045859)
chr1 (430-495)||(44094698-44094763)
chr1 (430-493)||(32000269-32000332)
chr1 (430-495)||(18404442-18404507)
chr1 (430-495)||(19015404-19015469)
chr1 (430-495)||(25463676-25463741)
chr1 (430-495)||(36966708-36966773)
chr1 (430-495)||(37821834-37821899)
chr1 (433-495)||(3559620-3559682)
chr1 (430-495)||(6883487-6883552)
chr1 (430-495)||(41876442-41876507)
chr1 (430-495)||(25973414-25973478)
chr1 (430-495)||(40273702-40273767)
chr1 (430-495)||(27523255-27523322)
chr1 (434-492)||(52064376-52064434)
chr1 (434-495)||(25973613-25973673)
chr1 (434-495)||(37821633-37821693)
chr1 (434-495)||(19015610-19015670)
chr1 (430-467)||(34519758-34519795)
chr1 (442-495)||(44690828-44690881)
chr1 (430-467)||(51620980-51621017)
chr1 (434-495)||(51737711-51737771)
chr1 (430-494)||(44691030-44691094)
chr1 (434-484)||(6883704-6883753)
chr1 (442-495)||(9910098-9910150)
chr1 (442-495)||(19722906-19722958)
chr1 (434-495)||(20304929-20304989)
chr1 (434-495)||(32000065-32000125)
chr1 (434-495)||(33786430-33786490)
chr1 (434-495)||(33786635-33786695)
chr1 (434-495)||(40215194-40215254)
chr1 (434-495)||(40273914-40273974)
chr1 (434-483)||(41876241-41876289)
chr1 (430-467)||(52329319-52329356)
chr1 (434-478)||(27523054-27523098)
[»] scaffold1769 (1 HSPs)
scaffold1769 (55-230)||(335-502)
[»] scaffold0471 (2 HSPs)
scaffold0471 (430-495)||(12842-12907)
scaffold0471 (434-494)||(13049-13108)
[»] scaffold0096 (1 HSPs)
scaffold0096 (430-495)||(41011-41076)
[»] scaffold0085 (1 HSPs)
scaffold0085 (430-495)||(47850-47915)
[»] scaffold0060 (3 HSPs)
scaffold0060 (55-230)||(69256-69423)
scaffold0060 (55-186)||(65316-65443)
scaffold0060 (15-47)||(65266-65298)
[»] chr5 (30 HSPs)
chr5 (430-495)||(2477636-2477701)
chr5 (430-495)||(6043511-6043576)
chr5 (430-495)||(11361131-11361196)
chr5 (430-493)||(3362778-3362841)
chr5 (430-493)||(38899728-38899791)
chr5 (430-495)||(4892202-4892267)
chr5 (434-495)||(8145379-8145440)
chr5 (430-495)||(14138668-14138733)
chr5 (430-495)||(22913054-22913119)
chr5 (430-495)||(25398238-25398303)
chr5 (430-495)||(33584329-33584394)
chr5 (430-493)||(12850801-12850864)
chr5 (429-495)||(37321793-37321860)
chr5 (430-495)||(3522006-3522071)
chr5 (430-495)||(4434007-4434072)
chr5 (430-495)||(12614733-12614798)
chr5 (430-495)||(17545685-17545750)
chr5 (434-484)||(27481830-27481880)
chr5 (442-495)||(10458409-10458462)
chr5 (434-495)||(4892408-4892468)
chr5 (434-495)||(33584128-33584188)
chr5 (434-493)||(3362987-3363045)
chr5 (434-493)||(12851010-12851068)
chr5 (434-493)||(38899524-38899583)
chr5 (434-495)||(3521806-3521866)
chr5 (434-495)||(6043311-6043371)
chr5 (434-495)||(8145579-8145639)
chr5 (430-467)||(13664642-13664679)
chr5 (434-495)||(22912856-22912916)
chr5 (447-495)||(27482029-27482077)
[»] chr2 (29 HSPs)
chr2 (430-495)||(7475508-7475573)
chr2 (430-495)||(9293576-9293641)
chr2 (430-495)||(21936081-21936146)
chr2 (430-495)||(23268062-23268127)
chr2 (430-495)||(35160757-35160822)
chr2 (431-495)||(10661888-10661952)
chr2 (430-494)||(13354846-13354910)
chr2 (433-495)||(31174834-31174896)
chr2 (429-495)||(33380206-33380272)
chr2 (430-495)||(14941366-14941431)
chr2 (430-495)||(43330912-43330977)
chr2 (429-495)||(9723404-9723470)
chr2 (430-495)||(27847632-27847697)
chr2 (434-495)||(22592918-22592979)
chr2 (432-495)||(21393688-21393751)
chr2 (8-54)||(24857405-24857451)
chr2 (434-495)||(10662094-10662154)
chr2 (434-495)||(7475307-7475367)
chr2 (434-495)||(9293374-9293434)
chr2 (442-495)||(9723612-9723665)
chr2 (434-495)||(21393485-21393544)
chr2 (442-495)||(22591494-22591547)
chr2 (434-495)||(33380413-33380473)
chr2 (434-495)||(35160965-35161025)
chr2 (434-493)||(31174634-31174692)
chr2 (433-467)||(40262714-40262748)
chr2 (458-495)||(3989104-3989141)
chr2 (434-495)||(23267861-23267921)
chr2 (434-494)||(3989283-3989342)
[»] scaffold0204 (1 HSPs)
scaffold0204 (430-495)||(4396-4461)
[»] scaffold0665 (1 HSPs)
scaffold0665 (431-495)||(3069-3133)
[»] scaffold0228 (5 HSPs)
scaffold0228 (441-495)||(8413-8467)
scaffold0228 (441-495)||(15995-16049)
scaffold0228 (441-495)||(25947-26001)
scaffold0228 (434-495)||(16190-16250)
scaffold0228 (434-495)||(26142-26202)


Alignment Details
Target: chr7 (Bit Score: 160; Significance: 5e-85; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 7 - 241
Target Start/End: Original strand, 7915435 - 7915676
Alignment:
Q  7 accttaacaggaacaactaatggagtgagaataaaaacttggaaggtatgag-----------attttgaaatttagcatgttcggcactcta--caatt 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||| ||||||||  |||||    
T  7915435 accttaacaggaacaactaatggagtgagaataaaaacttggaaggtatgagttggtcttgagattttgaaatttagcatgttctgcactctatacaatt 7915534  T
Q  94 caagacaattgaaattgaaaggatacacttgatagaggttaagaataaatttaaaaagtggactttctacttttcatgttaattttgttttggggcattc 193  Q
    ||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  7915535 caagacaatt------gaaaggatacacttgatagaggttaagaataaatttaaaaagtggactttctacttttcatattaattatgttttggggcattc 7915628  T
Q  194 tataagttttaagggatttttgaaataacatggttgaattgtaaagtg 241  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7915629 tataagtttaaagggatttttgaaataacatggttgaattgtaaagtg 7915676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 237 - 409
Target Start/End: Original strand, 7915724 - 7915896
Alignment:
Q  237 aagtgcctatggagccaagcttgttggtttcctcagaagtctaatagaagttgttatcatagaagaaactgtgttcagcttgccattgttgaattgtaat 336  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7915724 aagtgcctatccagccaagcttgttggtttcctcagaagtctaatagaagttgttatcatagaagaaactgtgttcagcttgccattgttgaatggtaat 7915823  T
Q  337 cttgttactgctctaagaataagttctttgtgaattgtcattctcaacatgatgtaatttctgatattaaatt 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7915824 cttgttactgctctaagaataagttctttgtgaattgtcattctcaacatgatggaatttctgatattaaatt 7915896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 15329273 - 15329338
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15329273 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 15329338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 48880992 - 48880927
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48880992 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 48880927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 3961979 - 3962044
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3961979 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 3962044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 4974800 - 4974735
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4974800 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 4974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 15577915 - 15577850
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15577915 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 15577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 42611811 - 42611876
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42611811 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42611876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 45637712 - 45637777
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45637712 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 45637777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 8364492 - 8364352
Alignment:
Q  55 tgagattttgaaatttagcatgttcggcactctacaattcaagacaattgaaattgaaaggatacacttgatagaggttaagaataaa--tttaaaaagt 152  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| ||||||      | |||||||||||||||||||||||||||  || ||||| |    
T  8364492 tgagattttgaaatttagcatgttcggcactctacaattc--gacagttgaaa------gaatacacttgatagaggttaagaataaactttcaaaaact 8364401  T
Q  153 ggactttctacttttcatgttaattttgttttggggcattctataagtt 201  Q
    |||  ||| |||| ||||||| |||||||| ||| ||||||| ||||||    
T  8364400 ggaacttcaacttatcatgtttattttgttatggagcattctgtaagtt 8364352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 430 - 493
Target Start/End: Original strand, 24394972 - 24395035
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataa 493  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  24394972 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 24395035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 8442612 - 8442530
Alignment:
Q  148 aaagtggactttctacttttcatgttaattttgttttggggcattctataagttttaagggatttttgaaataacatggttga 230  Q
    |||||||| |||| |||| ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| |||||||    
T  8442612 aaagtggaatttcaacttatcatgttaattttgttttggggcatcctataagtttaaaggaatttttgaaataacttggttga 8442530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 20010162 - 20010098
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  20010162 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacat-acagaataatc 20010098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 34482835 - 34482900
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  34482835 gagcaatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatc 34482900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 35444558 - 35444623
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  35444558 gagcaatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 35444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 8348481 - 8348336
Alignment:
Q  55 tgagattttgaaatttagcatgttcggcactctacaattcaagacaattgaaattgaaaggatacacttgatagaggttaagaataaattt---aaaaag 151  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||      | ||||||| |||||||||| |||||||| ||||||| ||   |||| |    
T  8348481 tgagattttgaagtttagcatgttcggaactctacaattcgagac------agttgaaagaatacacttgaaagaggttacgaataaactttcaaaaatg 8348388  T
Q  152 tggactttctact--tttcatgttaattttgttttggggcattctataagtt 201  Q
    |||| |||| |||  | ||| |||||||||||||||||||||||||||||||    
T  8348387 tggaatttcaacttatatcaggttaattttgttttggggcattctataagtt 8348336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 429 - 495
Target Start/End: Complemental strand, 25167916 - 25167850
Alignment:
Q  429 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||||||||    
T  25167916 ggagcaatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 25167850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 388
Target Start/End: Complemental strand, 8409636 - 8409535
Alignment:
Q  287 ttgttatcatagaagaaactgtgttcagcttgccattgttgaattgtaatcttgttactgctctaagaataagttctttgtgaattgtcattctcaacat 386  Q
    ||||||||| |||||||||| |||||| ||| | |||||||||   |||||||||| ||||||||||||||||||  || | ||||||||||||||||||    
T  8409636 ttgttatcaaagaagaaactttgttcaactttctattgttgaaagataatcttgttgctgctctaagaataagttaattttcaattgtcattctcaacat 8409537  T
Q  387 ga 388  Q
    ||    
T  8409536 ga 8409535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 8448354 - 8448293
Alignment:
Q  258 tgttggtttcctcagaagtctaatagaagttgttatcatagaagaaactgtgttcagcttgc 319  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  8448354 tgttggtttcctcagaagtctgttagaagttgttatcatagaagaaactttgttcagcttgc 8448293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 37477145 - 37477080
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||| || |||||||||||| ||||||||||    
T  37477145 gagcaatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatc 37477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 287 - 384
Target Start/End: Complemental strand, 8411113 - 8411016
Alignment:
Q  287 ttgttatcatagaagaaactgtgttcagcttgccattgttgaattgtaatcttgttactgctctaagaataagttctttgtgaattgtcattctcaac 384  Q
    ||||| |||||||| |  || |||||||  ||| ||||||||||  |||||||||| |||||||||||||||||||||||| || |||||||||||||    
T  8411113 ttgttgtcatagaaaatgctttgttcaggctgctattgttgaatgataatcttgttgctgctctaagaataagttctttgtcaactgtcattctcaac 8411016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 15238382 - 15238447
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||    
T  15238382 gagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 15238447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 18036978 - 18037043
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||| |||||||||||||||||||| ||||||||| || |||||||||||| ||||||||||    
T  18036978 gagcaatgatatatatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatc 18037043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 494
Target Start/End: Complemental strand, 36790528 - 36790467
Alignment:
Q  433 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataat 494  Q
    ||||||||||||||||||||| |||||||||||||| || |||||||||||| |||||||||    
T  36790528 caatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataat 36790467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 429 - 495
Target Start/End: Original strand, 29737138 - 29737204
Alignment:
Q  429 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||| ||||||||||||||||||||||||| | |||||||||| ||||||||||||  |||||||||    
T  29737138 ggagtaatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatc 29737204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 8442695 - 8442654
Alignment:
Q  57 agattttgaaatttagcatgttcggcactctacaattcaaga 98  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  8442695 agattttgaaatttagcatgttaggcactctagaattcaaga 8442654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 25167655 - 25167715
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  25167655 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 25167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 35445663 - 35445603
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  35445663 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacacaataatc 35445603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 42696083 - 42696148
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||| |||||||||||||||||||||| || ||  ||| |||||||||||  ||||||||||    
T  42696083 gagcaatgttatatatcaagaaagattttattaaaaattttttaagaatgacatagcagaataatc 42696148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 48880726 - 48880786
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  48880726 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 48880786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 434 - 496
Target Start/End: Original strand, 36790275 - 36790337
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatct 496  Q
    ||||||| ||||||| || | ||||||||| |||  |||||||||||||||||| ||||||||    
T  36790275 aatgctaaatatcaataatggttttatcaacaaagattcaagaatgacatgacacaataatct 36790337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 8348536 - 8348499
Alignment:
Q  11 taacaggaacaactaatggagtgagaataaaaacttgg 48  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  8348536 taacaggaacaactaatggagtgaggataataacttgg 8348499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 387
Target Start/End: Complemental strand, 8354679 - 8354614
Alignment:
Q  322 ttgttgaattgtaatcttgttactgctctaagaataagttctttgtgaattgtcattctcaacatg 387  Q
    |||||||||  |||||||| | || ||||||||||||||||||| | || | ||||||||||||||    
T  8354679 ttgttgaatcataatcttgcttctcctctaagaataagttctttatcaactctcattctcaacatg 8354614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 8354732 - 8354683
Alignment:
Q  254 agcttgttggtttcctcagaagtctaatagaagttgttatcatagaagaa 303  Q
    ||||| ||||||||||||||||| |  ||||| |||||||||||||||||    
T  8354732 agcttattggtttcctcagaagtttgttagaacttgttatcatagaagaa 8354683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 495
Target Start/End: Original strand, 20009905 - 20009958
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||| ||| ||||||||||| |||  |||||||||||||||||| |||||||    
T  20009905 atatcatgaatgattttatcaaaaaagattcaagaatgacatgacacaataatc 20009958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 495
Target Start/End: Original strand, 30848597 - 30848634
Alignment:
Q  458 tatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  30848597 tatcaagaaaattttaagaatgacatggcagaataatc 30848634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 30848835 - 30848775
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| | |||||| ||||||| ||||||||||||||| || |||||||    
T  30848835 aatgctagatatcaagaatgcttttat-aagaaaaattcaagaatgacatggcacaataatc 30848775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 8453984 - 8453908
Alignment:
Q  254 agcttgttggtttcctcagaagtctaatagaagttgttatcatagaagaaactgtgttcagcttgccattgttgaat 330  Q
    ||||| ||||||||||||| | |||  ||||| ||||||||||| ||||| || ||||||| || | ||||||||||    
T  8453984 agctttttggtttcctcaggattctgttagaacttgttatcatacaagaagctttgttcagtttactattgttgaat 8453908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 11621 - 11686
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11621 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 11686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 6e-29; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 6041884 - 6041949
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6041884 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 6041949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 2754717 - 2754782
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  2754717 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2754782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 3574592 - 3574527
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  3574592 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 3574527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 37217118 - 37217053
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  37217118 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37217053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 430 - 494
Target Start/End: Original strand, 11347268 - 11347332
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataat 494  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  11347268 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 11347332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 42297353 - 42297419
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgac-agaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  42297353 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgactagaataatc 42297419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 3137479 - 3137414
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  3137479 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatc 3137414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 3456064 - 3456129
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||    
T  3456064 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 3456129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 30385011 - 30385076
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  30385011 gagcaatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatc 30385076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 33113793 - 33113858
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  33113793 gagcaatgctatatatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatc 33113858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 37522053 - 37522118
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  37522053 gagcaatactatatatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatc 37522118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 48160905 - 48160970
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||    
T  48160905 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 48160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 429 - 495
Target Start/End: Complemental strand, 19650966 - 19650900
Alignment:
Q  429 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  19650966 ggagcaatgttatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 19650900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 34482975 - 34482910
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||  |||||||||    
T  34482975 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatc 34482910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 431 - 495
Target Start/End: Complemental strand, 9797093 - 9797029
Alignment:
Q  431 agcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  9797093 agcaatgttatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 9797029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 429 - 495
Target Start/End: Complemental strand, 8320650 - 8320584
Alignment:
Q  429 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||| || |||||||    
T  8320650 ggagcaatgttatatatcaagaaagattttatcaagaaaattttaagaatgatatggcaaaataatc 8320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 22426409 - 22426344
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||| ||||||| ||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  22426409 gagcaatgttatatattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatc 22426344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 33145713 - 33145777
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||| ||||||||||    
T  33145713 gagcaatgctatatatcaagaaagattttattaa-aaaattttaagaatgacatggcagaataatc 33145777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 491
Target Start/End: Original strand, 42921154 - 42921204
Alignment:
Q  441 tatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaat 491  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  42921154 tatatcaagaaagattttatcaagaaaattttaagaatgacatgaccgaat 42921204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 33839531 - 33839596
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||| ||||||| ||||||||||||||||| |||| || |||||| ||||||||||||||||    
T  33839531 gagcaatgttatatattaagaaagattttatcaaaaaaaatttaagaataacatgacagaataatc 33839596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 36865092 - 36865027
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||| ||| |||||||||| |||||||||| ||||||||||||  |||||||||    
T  36865092 gagcaatgctatatattaaggaagattttattaagaaaattttaagaatgacatggtagaataatc 36865027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 40328098 - 40328037
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||||||||||  |||||||||||||||||| |||||||    
T  40328098 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 40328037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 439 - 495
Target Start/End: Complemental strand, 33839797 - 33839741
Alignment:
Q  439 tatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||| |||||||    
T  33839797 tatatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 33839741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 484
Target Start/End: Original strand, 41224232 - 41224287
Alignment:
Q  429 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatg 484  Q
    |||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  41224232 ggagcactgctatatattaagaaagattttctcaagaaaaattcaagaatgacatg 41224287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 8362110 - 8362045
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||| |   | ||||||||| ||||||||||||||| ||||||||||    
T  8362110 gagcaatgctatatatcaagaaaaaaaatttcaagaaaaattcaagaatgacatggcagaataatc 8362045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 24343547 - 24343612
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| | | | ||| ||||||||||    
T  24343547 gagcaatgctatatattaagaaagattttatcaagaaaaattcaaaattaatatggcagaataatc 24343612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 36864831 - 36864892
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| ||||||||||| |||  |||||||||||||||||| |||||||    
T  36864831 aatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatc 36864892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 494
Target Start/End: Original strand, 47738117 - 47738169
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataat 494  Q
    ||||||||||||||||||||||||||  ||||||||||| ||| |||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataat 47738169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 430 - 493
Target Start/End: Original strand, 26612785 - 26612848
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataa 493  Q
    |||||||  |||||||||| ||||||||||| || |||| ||||||||||||||| ||||||||    
T  26612785 gagcaatattatatatcaaaaaagattttataaaaaaaaattcaagaatgacatggcagaataa 26612848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 467
Target Start/End: Original strand, 40327878 - 40327912
Alignment:
Q  433 caatgctatatatcaagaaagattttatcaagaaa 467  Q
    |||||||||||||||||||||||||||||||||||    
T  40327878 caatgctatatatcaagaaagattttatcaagaaa 40327912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 3137213 - 3137273
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  3137213 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 3137273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 8361838 - 8361898
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| ||||| |||||||||  |||||||||||||||||| |||||||    
T  8361838 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatgacacaataatc 8361898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 33145978 - 33145918
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  33145978 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 33145918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 34482687 - 34482747
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  34482687 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 34482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 442 - 495
Target Start/End: Complemental strand, 47738370 - 47738317
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||| |||||||||||||||  ||||||||||||||| || |||||||    
T  47738370 atatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatc 47738317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 461
Target Start/End: Complemental strand, 47402661 - 47402630
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatc 461  Q
    ||||||||||||||||||||||||||||||||    
T  47402661 gagcaatgctatatatcaagaaagattttatc 47402630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 487
Target Start/End: Complemental strand, 3456330 - 3456278
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgaca 487  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||||||    
T  3456330 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgaca 3456278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 3574325 - 3574385
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||||||| |||||||    
T  3574325 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatc 3574385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 9796828 - 9796888
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||||||| || |||||||    
T  9796828 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatgtcacaataatc 9796888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 19650699 - 19650759
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||||||| |||||||    
T  19650699 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatc 19650759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 22426144 - 22426204
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||    
T  22426144 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 22426204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 30385666 - 30385606
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||    
T  30385666 aatgctaaatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 30385606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 33114060 - 33114000
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||    
T  33114060 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 33114000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 37522319 - 37522259
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||    
T  37522319 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcataataatc 37522259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 41224500 - 41224440
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||||||| || |||||||    
T  41224500 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatc 41224440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 495
Target Start/End: Complemental strand, 41883260 - 41883223
Alignment:
Q  458 tatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  41883260 tatcaagaaaaattcaagaatgacatggcagaataatc 41883223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 495
Target Start/End: Complemental strand, 46919153 - 46919100
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||| ||||||||||| |||  ||||| ||||||||| ||||||||||    
T  46919153 atatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatc 46919100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 26042181 - 26042116
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26042181 gagcaatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 26042116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 32064745 - 32064810
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32064745 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 32064810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 34665382 - 34665447
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34665382 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 34665447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 17841915 - 17841850
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  17841915 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 17841850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 20091866 - 20091801
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  20091866 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 20091801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 24211618 - 24211553
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  24211618 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatggcatggcagaataatc 24211553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 32393858 - 32393923
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  32393858 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 32393923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 40780194 - 40780129
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  40780194 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 40780129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 42755107 - 42755042
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42755107 gagcaatgatatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42755042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 430 - 494
Target Start/End: Original strand, 15187560 - 15187624
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataat 494  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  15187560 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 15187624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 433 - 495
Target Start/End: Original strand, 8453837 - 8453899
Alignment:
Q  433 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  8453837 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatc 8453899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 1646030 - 1645965
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  1646030 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatc 1645965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 35353041 - 35353106
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  35353041 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 35353106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 438 - 495
Target Start/End: Original strand, 38016979 - 38017036
Alignment:
Q  438 ctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38016979 ctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 38017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 431 - 495
Target Start/End: Original strand, 14128865 - 14128929
Alignment:
Q  431 agcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  14128865 agcaatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 14128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 31347847 - 31347782
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||    
T  31347847 gagcaatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatc 31347782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 37986116 - 37986055
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  37986116 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 37986055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 39772866 - 39772801
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||| |||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  39772866 gagcaatgttatatatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatc 39772801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 6108298 - 6108233
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||| |||||||||||||||||||| | |||||||||| |||||||||||| ||||||||||    
T  6108298 gagcaatgttatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 6108233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 7017930 - 7017865
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||| |||||||||| | ||||||| ||||||||||||||| ||||||||||    
T  7017930 gagcaatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatc 7017865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 37132723 - 37132658
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||| ||| ||||||||||||||| || |||||||||||| ||||||||||    
T  37132723 gagcaatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatc 37132658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 431 - 495
Target Start/End: Complemental strand, 27782181 - 27782117
Alignment:
Q  431 agcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||| ||||||||||||||  ||||| ||||||||| ||||||||||    
T  27782181 agcaatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatc 27782117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 429 - 495
Target Start/End: Complemental strand, 30835112 - 30835047
Alignment:
Q  429 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||| ||||||||||    
T  30835112 ggagcaatgttatatatcaagaaagattttatcga-aaaaattcaagaatgacatggcagaataatc 30835047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 41819843 - 41819778
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||| ||||||||||||||||||||||||||||  ||| |||||||| ||| ||||||||||    
T  41819843 gagcaatgttatatatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatc 41819778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 435 - 495
Target Start/End: Complemental strand, 25581299 - 25581239
Alignment:
Q  435 atgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||| |||||  ||||||||||||||||||||||| || |||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatc 25581239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 440 - 495
Target Start/End: Original strand, 7021988 - 7022043
Alignment:
Q  440 atatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||| ||||||||||    
T  7021988 atatatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatc 7022043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 430 - 484
Target Start/End: Complemental strand, 27835518 - 27835464
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatg 484  Q
    ||||||||||||||||||| |||||| |||| ||||||| |||||||||||||||    
T  27835518 gagcaatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatg 27835464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 3890413 - 3890474
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||| ||| ||||||||||    
T  3890413 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatc 3890474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 6108032 - 6108092
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  6108032 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 6108092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 487
Target Start/End: Complemental strand, 24844919 - 24844866
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgaca 487  Q
    ||||||| ||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  24844919 aatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatgaca 24844866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 37132479 - 37132540
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||||||||||  |||| ||||||||||||| |||||||    
T  37132479 aatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatc 37132540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 442 - 493
Target Start/End: Original strand, 30834862 - 30834913
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataa 493  Q
    |||||||||| |||||||||||||||  || |||||||||||||||||||||    
T  30834862 atatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataa 30834913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 1503642 - 1503702
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  1503642 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 1503702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 17841649 - 17841709
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  17841649 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 17841709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 25581038 - 25581098
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||| ||| |||||||    
T  25581038 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacataacacaataatc 25581098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 26041912 - 26041972
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  26041912 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 32065012 - 32064952
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  32065012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataatc 32064952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 499
Target Start/End: Complemental strand, 38017199 - 38017135
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatctacc 499  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||| ||||    
T  38017199 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatttacc 38017135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 40779928 - 40779988
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  40779928 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 40779988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 474
Target Start/End: Original strand, 30055543 - 30055587
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaa 474  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||||    
T  30055543 gagcaatgctatataccaaggaagattttatcaaaaaaatttcaa 30055587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 493
Target Start/End: Complemental strand, 1886672 - 1886621
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataa 493  Q
    |||||||||| |||||||||||||||  |||||||||||| || ||||||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgacgtggcagaataa 1886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 495
Target Start/End: Complemental strand, 35353300 - 35353247
Alignment:
Q  441 tatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  35353300 tatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35353247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 495
Target Start/End: Complemental strand, 3817967 - 3817930
Alignment:
Q  458 tatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  3817967 tatcaagaaaaattcaagaattacatgacagaataatc 3817930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 495
Target Start/End: Complemental strand, 3890653 - 3890616
Alignment:
Q  458 tatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  3890653 tatcaagaaaaattcaagaatgacatggcagaataatc 3890616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 10044614 - 10044554
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||    
T  10044614 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 10044554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 14129125 - 14129065
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||    
T  14129125 aatgctagatatcaagaatgattttat-aagaaatattcaagaatgacatggcacaataatc 14129065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 20091600 - 20091660
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||    
T  20091600 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 20091660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 30055782 - 30055722
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||| ||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  30055782 aatgctagatattaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 30055722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 31347575 - 31347635
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||||||| || |||||||    
T  31347575 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 31347635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 34665647 - 34665587
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||    
T  34665647 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 34665587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 37985855 - 37985915
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||    
T  37985855 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 37985915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 458 - 494
Target Start/End: Complemental strand, 3597078 - 3597042
Alignment:
Q  458 tatcaagaaaatttcaagaatgacatgacagaataat 494  Q
    |||||||||| |||||||||||||||| |||||||||    
T  3597078 tatcaagaaagtttcaagaatgacatggcagaataat 3597042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 17176086 - 17176021
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17176086 gagcaatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatc 17176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 17705530 - 17705465
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17705530 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 33695392 - 33695327
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33695392 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33695327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 33696696 - 33696761
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33696696 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 6127275 - 6127340
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  6127275 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 6127340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 18365638 - 18365573
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  18365638 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18365573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 18370902 - 18370837
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  18370902 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18370837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 23291149 - 23291084
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  23291149 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 23291084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 28675148 - 28675213
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  28675148 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatc 28675213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 429 - 495
Target Start/End: Original strand, 25986929 - 25986995
Alignment:
Q  429 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||    
T  25986929 ggagcaatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatc 25986995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 6031806 - 6031741
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  6031806 gagcaatgctatatatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatc 6031741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 430 - 494
Target Start/End: Complemental strand, 18889761 - 18889698
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataat 494  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  18889761 gagcaatgctatatatcaagaaagattt-atcaagaaaatttcaagaatgacatggcagaataat 18889698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 436 - 495
Target Start/End: Complemental strand, 11548647 - 11548588
Alignment:
Q  436 tgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||    
T  11548647 tgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatc 11548588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 433 - 495
Target Start/End: Complemental strand, 8515787 - 8515725
Alignment:
Q  433 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||| |  || |||||||||||| ||||||||||    
T  8515787 caatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatc 8515725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 495
Target Start/End: Original strand, 32702206 - 32702270
Alignment:
Q  429 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||  |||||||||||||| ||| ||||||||||||||||| ||| ||||||||||    
T  32702206 ggagcaatgctata--tcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatc 32702270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 34238886 - 34238946
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||||||||| | |||||||||||||||||| |||||||    
T  34238886 aatgctagatatcaagaatgattttatcaagaaga-ttcaagaatgacatgacacaataatc 34238946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 434 - 494
Target Start/End: Complemental strand, 29693712 - 29693652
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataat 494  Q
    ||||||| |||||||||| |||||||||||||||  || |||||||||||| |||||||||    
T  29693712 aatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataat 29693652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 434 - 494
Target Start/End: Complemental strand, 32702471 - 32702412
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataat 494  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| ||||||    
T  32702471 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataat 32702412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 2309488 - 2309423
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||| ||||||||||||||||||||||||| |   ||| ||||||| |||| ||||||||||    
T  2309488 gagcaatgttatatatcaagaaagattttatcaaaatttttttaagaatggcatggcagaataatc 2309423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 9752309 - 9752245
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||| |||||||||||||| | || |||||||||| ||||||||||| ||| ||||||||||    
T  9752309 gagcaatgttatatatcaagaaaaaatt-atcaagaaaaattcaagaatgatatggcagaataatc 9752245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 17705268 - 17705328
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  17705268 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 17705328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 28675414 - 28675354
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  28675414 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 28675354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 495
Target Start/End: Original strand, 29693478 - 29693515
Alignment:
Q  458 tatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  29693478 tatcaagaaatattcaagaatgacatgacagaataatc 29693515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 10442854 - 10442789
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10442854 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 10442789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 22199261 - 22199326
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22199261 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 22199326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 31078884 - 31078819
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31078884 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 31078819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 49387953 - 49387888
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49387953 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 49387888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 430 - 493
Target Start/End: Original strand, 36072947 - 36073010
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataa 493  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36072947 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataa 36073010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 2624837 - 2624902
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  2624837 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatc 2624902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 21802387 - 21802322
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  21802387 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 21802322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 24128239 - 24128304
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  24128239 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 24128304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 33530753 - 33530688
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  33530753 gagcaatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatc 33530688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 47290066 - 47290131
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  47290066 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 47290131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 431 - 495
Target Start/End: Complemental strand, 7745176 - 7745112
Alignment:
Q  431 agcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  7745176 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 7745112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 430 - 493
Target Start/End: Original strand, 4751446 - 4751509
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataa 493  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  4751446 gagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 4751509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 24392667 - 24392732
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  24392667 gagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 24392732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 36073354 - 36073415
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  36073354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 36073415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 44893426 - 44893491
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  44893426 gagcaatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatc 44893491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 53123030 - 53123096
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatc-aagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  53123030 gagcaatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatc 53123096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 23964530 - 23964465
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  23964530 gagcaatgttatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 23964465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 46441844 - 46441909
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||||    
T  46441844 gagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatc 46441909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 50156643 - 50156578
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||| |||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  50156643 gagcaatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 50156578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 430 - 484
Target Start/End: Complemental strand, 37935006 - 37934952
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatg 484  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  37935006 gagcaatgctatatatcaaaaaagattttatcaaaaaaatgtcaagaatgacatg 37934952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 44893279 - 44893213
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaa-tttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||| |||||||||||| |||| |||| |||||||||||||||| ||||||||||    
T  44893279 gagcaatgctatatattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatc 44893213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 495
Target Start/End: Original strand, 42671675 - 42671734
Alignment:
Q  436 tgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||| |||||||||||||| |||| || |||||||||||| ||||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatc 42671734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 11314050 - 11314111
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||||||||||  | |||||||||||||||| |||||||    
T  11314050 aatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatc 11314111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 25063373 - 25063434
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||||||||||  |||||||||||||||  |||||||||    
T  25063373 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatc 25063434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 442 - 495
Target Start/End: Complemental strand, 42671927 - 42671874
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||| |||||||||||||||  |||||||||||||||||| |||||||    
T  42671927 atatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatc 42671874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 458 - 495
Target Start/End: Original strand, 9088898 - 9088935
Alignment:
Q  458 tatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  9088898 tatcaagaaaatttcaagaatgacatggcagaataatc 9088935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 9089136 - 9089076
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  9089136 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 21802119 - 21802179
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  21802119 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 21802179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 36073615 - 36073555
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  36073615 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 36073555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 442 - 495
Target Start/End: Complemental strand, 37219890 - 37219837
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||| |||||||||||||||  || |||||||||||| ||||||||||    
T  37219890 atatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatc 37219837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 46442110 - 46442050
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  46442110 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 46442050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 442 - 495
Target Start/End: Original strand, 50156386 - 50156438
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  50156386 atatcaagaatgattttat-aagaaaaattcaagaatgacatgacataataatc 50156438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 53123297 - 53123237
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  53123297 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 53123237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 494
Target Start/End: Complemental strand, 17655697 - 17655637
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataat 494  Q
    ||||||| |||| ||||| |||||||||||||||  || ||||||||||||||| ||||||    
T  17655697 aatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataat 17655637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 494
Target Start/End: Complemental strand, 24128505 - 24128446
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataat 494  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| ||||||    
T  24128505 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataat 24128446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 495
Target Start/End: Complemental strand, 36073795 - 36073743
Alignment:
Q  443 tatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||| ||||||  || ||||||||||||||| |||||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatc 36073743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 434 - 484
Target Start/End: Complemental strand, 47290332 - 47290283
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatg 484  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||    
T  47290332 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatg 47290283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 10442586 - 10442646
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||    
T  10442586 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 10442646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Original strand, 17655462 - 17655495
Alignment:
Q  462 aagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||| ||||||||||    
T  17655462 aagaaaatttcaagaatgacatggcagaataatc 17655495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 31078618 - 31078678
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| || |||||| ||||||||||||| || |||||||    
T  31078618 aatgctagatatcaagaatgattttataaaaaaaatt-caagaatgacatggcacaataatc 31078678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 44893012 - 44893072
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||    
T  44893012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 44893692 - 44893632
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||    
T  44893692 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 40214988 - 40215053
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40214988 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 40215053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 9910358 - 9910293
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  9910358 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 9910293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 16045859 - 16045798
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16045859 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16045798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 44094698 - 44094763
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  44094698 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 44094763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 430 - 493
Target Start/End: Complemental strand, 32000332 - 32000269
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataa 493  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  32000332 gagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataa 32000269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 18404442 - 18404507
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||    
T  18404442 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatc 18404507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 19015404 - 19015469
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  19015404 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 19015469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 25463676 - 25463741
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  25463676 gagcaatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatc 25463741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 36966773 - 36966708
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  36966773 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 36966708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 37821899 - 37821834
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  37821899 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 37821834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 433 - 495
Target Start/End: Original strand, 3559620 - 3559682
Alignment:
Q  433 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  3559620 caatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 3559682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 6883487 - 6883552
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  6883487 gagcaatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatc 6883552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 41876507 - 41876442
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  41876507 gagcaatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatc 41876442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 25973414 - 25973478
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||    
T  25973414 gagcaatgttatatatcaagaaagattttatcatgaaaatttcaagaatgaca-ggcagaataatc 25973478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 40273702 - 40273767
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||| || |||||||    
T  40273702 gagcaatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatc 40273767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 27523322 - 27523255
Alignment:
Q  430 gagcaatgctatata--tcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||  |||||||  ||||||||||||||| || |||||||||||||||||||||||    
T  27523322 gagcaatgctatatacatcaagaacaattttatcaagaaaaatttaagaatgacatgacagaataatc 27523255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 434 - 492
Target Start/End: Original strand, 52064376 - 52064434
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaata 492  Q
    ||||||| ||||||| || |||||||||||||||  |||||||||||||||||||||||    
T  52064376 aatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaata 52064434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 25973673 - 25973613
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  25973673 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 25973613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 37821633 - 37821693
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  37821633 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 37821693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 19015670 - 19015610
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  19015670 aatgctacatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 19015610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 430 - 467
Target Start/End: Original strand, 34519758 - 34519795
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaa 467  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  34519758 gagcaatgctatatatcaagaaagattttattaagaaa 34519795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 442 - 495
Target Start/End: Original strand, 44690828 - 44690881
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  44690828 atatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatc 44690881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 430 - 467
Target Start/End: Original strand, 51620980 - 51621017
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaa 467  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  51620980 gagcaatgctatatatcaagaaagattttattaagaaa 51621017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 51737771 - 51737711
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  51737771 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 51737711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 494
Target Start/End: Complemental strand, 44691094 - 44691030
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataat 494  Q
    |||||||| | |||||||||||||||||||| || |||  ||||||||| ||||| |||||||||    
T  44691094 gagcaatgttgtatatcaagaaagattttataaaaaaagattcaagaattacatggcagaataat 44691030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 434 - 484
Target Start/End: Complemental strand, 6883753 - 6883704
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatg 484  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||    
T  6883753 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatg 6883704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 495
Target Start/End: Original strand, 9910098 - 9910150
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  9910098 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9910150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 495
Target Start/End: Original strand, 19722906 - 19722958
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  19722906 atatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 19722958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 20304929 - 20304989
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||    
T  20304929 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 20304989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 32000065 - 32000125
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||||||| || |||||||    
T  32000065 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 32000125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 33786430 - 33786490
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||||||| || |||||||    
T  33786430 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 33786490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 33786695 - 33786635
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||||||| || |||||||    
T  33786695 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 33786635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 40215254 - 40215194
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||    
T  40215254 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 40215194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 40273974 - 40273914
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||||||| || |||||||    
T  40273974 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatc 40273914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 483
Target Start/End: Original strand, 41876241 - 41876289
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacat 483  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||    
T  41876241 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacat 41876289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 467
Target Start/End: Original strand, 52329319 - 52329356
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaa 467  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  52329319 gagcaatgttatatatcaagaaagaatttatcaagaaa 52329356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 478
Target Start/End: Original strand, 27523054 - 27523098
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaat 478  Q
    |||| ||||||||||||| |||||||||||||||  |||||||||    
T  27523054 aatgttatatatcaagaatgattttatcaagaaagattcaagaat 27523098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1769 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold1769
Description:

Target: scaffold1769; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 55 - 230
Target Start/End: Original strand, 335 - 502
Alignment:
Q  55 tgagattttgaaatttagcatgttcggcactctacaattcaagacaattgaaattgaaaggatacacttgatagaggttaagaataaatttaa--aaagt 152  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| | ||||||      | ||| |||||||||||| |||    |  ||| |  |||||    
T  335 tgagattttgaaatttagcatgttaggcactctagaattcaagatagttgaaa------gaatagacttgatagaggataa----acttttcaggaaagt 424  T
Q  153 ggactttctacttttcatgttaattttgttttggggcattctataagttttaagggatttttgaaataacatggttga 230  Q
    ||| |||| |||| ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| |||||||    
T  425 ggaatttcaacttatcatgttaattttgttttggggcatcctataagtttaaaggaatttttgaaataacttggttga 502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 12842 - 12907
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  12842 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 12907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 494
Target Start/End: Complemental strand, 13108 - 13049
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataat 494  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| ||||||    
T  13108 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataat 13049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 41011 - 41076
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  41011 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 41076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 47850 - 47915
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  47850 gagcaatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 47915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 55 - 230
Target Start/End: Original strand, 69256 - 69423
Alignment:
Q  55 tgagattttgaaatttagcatgttcggcactctacaattcaagacaattgaaattgaaaggatacacttgatagaggttaagaataaatttaaaaagtgg 154  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| | ||||||      | ||| |||||||||||| |||   |   | |  |||||||    
T  69256 tgagattttgaaatttagcatgttaggcactctagaattcaagatagttgaaa------gaatagacttgatagaggataaacttt--tctggaaagtgg 69347  T
Q  155 actttctacttttcatgttaattttgttttggggcattctataagttttaagggatttttgaaataacatggttga 230  Q
    | |||| |||| ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| |||||||    
T  69348 aatttcaacttatcatgttaattttgttttggggcatcctataagtttaaaggaatttttgaaataacttggttga 69423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 55 - 186
Target Start/End: Original strand, 65316 - 65443
Alignment:
Q  55 tgagattttgaaatttagcatgttcggcactctacaattcaagacaattgaaattgaaaggatacacttgatagaggttaagaataaa--tttaaaaagt 152  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||| ||||||      | ||| |||||||||||||||||||||||  || ||||| |    
T  65316 tgagattttgaaatatagcatgttaggcactctacaatttaagacagttgaaa------gaataaacttgatagaggttaagaataaactttcaaaaact 65409  T
Q  153 ggactttctacttttcatgttaattttgttttgg 186  Q
    ||| |||| |||| ||||||||||||||||||||    
T  65410 ggaatttcaacttatcatgttaattttgttttgg 65443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 65266 - 65298
Alignment:
Q  15 aggaacaactaatggagtgagaataaaaacttg 47  Q
    |||||||||||||||||||||| ||||||||||    
T  65266 aggaacaactaatggagtgagattaaaaacttg 65298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 2477636 - 2477701
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  2477636 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2477701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 6043576 - 6043511
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  6043576 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatc 6043511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 11361196 - 11361131
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  11361196 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 11361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 430 - 493
Target Start/End: Original strand, 3362778 - 3362841
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataa 493  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  3362778 gagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 3362841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 430 - 493
Target Start/End: Complemental strand, 38899791 - 38899728
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataa 493  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  38899791 gagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 38899728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 4892202 - 4892267
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  4892202 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 8145379 - 8145440
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8145379 aatgttatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8145440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 14138668 - 14138733
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  14138668 gagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaattacatggcagaataatc 14138733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 22913119 - 22913054
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  22913119 gagcaatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatc 22913054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 25398238 - 25398303
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  25398238 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 25398303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 33584394 - 33584329
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  33584394 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 33584329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 430 - 493
Target Start/End: Original strand, 12850801 - 12850864
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataa 493  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  12850801 gagcaatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataa 12850864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 429 - 495
Target Start/End: Complemental strand, 37321860 - 37321793
Alignment:
Q  429 ggagcaatgctatatatc-aagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  37321860 ggagcaatgctatatatctaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37321793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 3522071 - 3522006
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||| |||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  3522071 gagcaatgttatatatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatc 3522006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 4434072 - 4434007
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||| ||| ||||||||||    
T  4434072 gagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatc 4434007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 12614798 - 12614733
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||| |||||||    
T  12614798 gagcaatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatc 12614733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 17545750 - 17545685
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||||||||    
T  17545750 gagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 17545685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 434 - 484
Target Start/End: Original strand, 27481830 - 27481880
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatg 484  Q
    |||||||| ||| |||||||||||||||||||||| |||||||||||||||    
T  27481830 aatgctatgtattaagaaagattttatcaagaaaaattcaagaatgacatg 27481880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 442 - 495
Target Start/End: Original strand, 10458409 - 10458462
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| || |||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatc 10458462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 4892468 - 4892408
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  4892468 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 4892408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 33584128 - 33584188
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  33584128 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33584188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 493
Target Start/End: Complemental strand, 3363045 - 3362987
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataa 493  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||    
T  3363045 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataa 3362987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 493
Target Start/End: Complemental strand, 12851068 - 12851010
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataa 493  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||    
T  12851068 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataa 12851010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 493
Target Start/End: Original strand, 38899524 - 38899583
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataa 493  Q
    ||||||| |||||||||| |||||||| || |||| ||||||||||||||| || |||||    
T  38899524 aatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataa 38899583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 3521806 - 3521866
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||    
T  3521806 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 3521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 6043311 - 6043371
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||    
T  6043311 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 6043371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 8145639 - 8145579
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || |||||||    
T  8145639 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 8145579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 467
Target Start/End: Original strand, 13664642 - 13664679
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaa 467  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  13664642 gagcaatgttatatattaagaaagattttatcaagaaa 13664679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 22912856 - 22912916
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||||||| || |||||||    
T  22912856 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 22912916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 495
Target Start/End: Complemental strand, 27482077 - 27482029
Alignment:
Q  447 aagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||| ||||||||||| |||  |||||||||||||| |||||||||||    
T  27482077 aagaatgattttatcaaaaaagattcaagaatgacataacagaataatc 27482029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 7475573 - 7475508
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  7475573 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatc 7475508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 9293641 - 9293576
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  9293641 gagcaatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatc 9293576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 21936081 - 21936146
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  21936081 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 21936146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 23268127 - 23268062
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  23268127 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 23268062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 35160757 - 35160822
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  35160757 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 35160822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 431 - 495
Target Start/End: Original strand, 10661888 - 10661952
Alignment:
Q  431 agcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  10661888 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 10661952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 430 - 494
Target Start/End: Original strand, 13354846 - 13354910
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataat 494  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  13354846 gagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 13354910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 433 - 495
Target Start/End: Complemental strand, 31174896 - 31174834
Alignment:
Q  433 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  31174896 caatgttatatatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatc 31174834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 429 - 495
Target Start/End: Original strand, 33380206 - 33380272
Alignment:
Q  429 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| | ||||||||    
T  33380206 ggagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatc 33380272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 14941431 - 14941366
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||    
T  14941431 gagcaatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatc 14941366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 43330912 - 43330977
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| ||||||||||    
T  43330912 gagcaatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatc 43330977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 429 - 495
Target Start/End: Original strand, 9723404 - 9723470
Alignment:
Q  429 ggagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||| |||||||||||||| ||||||  || |||||||||||||||||||||||    
T  9723404 ggagcaatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatc 9723470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 27847632 - 27847697
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||| ||||| |||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  27847632 gagcaatgctgtatataaagaaagattttattaagaaagattcaagaatgacatgacagaataatc 27847697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 22592979 - 22592918
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||||||||||  |||||||||||||||||| |||||||    
T  22592979 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 22592918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 432 - 495
Target Start/End: Complemental strand, 21393751 - 21393688
Alignment:
Q  432 gcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||| ||||| ||||||||| || ||||||||||||  |||||||||    
T  21393751 gcaatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatc 21393688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 24857405 - 24857451
Alignment:
Q  8 ccttaacaggaacaactaatggagtgagaataaaaacttggaaggta 54  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||    
T  24857405 ccttaacaggaacaactaatggagtgagaataaaaacatggcaggta 24857451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 10662154 - 10662094
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  10662154 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 10662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 7475307 - 7475367
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  7475307 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacataataatc 7475367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 9293374 - 9293434
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  9293374 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 9293434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 442 - 495
Target Start/End: Complemental strand, 9723665 - 9723612
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||| ||||| |||||||||  || |||||||||||||||||||||||    
T  9723665 atatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatc 9723612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 21393485 - 21393544
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| ||||| |||||||||||| |||||||||||||||| |||||||    
T  21393485 aatgctagatatcaagaatgattt-atcaagaaaatt-caagaatgacatgacacaataatc 21393544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 442 - 495
Target Start/End: Original strand, 22591494 - 22591547
Alignment:
Q  442 atatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||| || |||| ||||||||||| ||| ||||||||||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatc 22591547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 33380473 - 33380413
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  33380473 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33380413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 35161025 - 35160965
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  35161025 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35160965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 493
Target Start/End: Original strand, 31174634 - 31174692
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataa 493  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||    
T  31174634 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataa 31174692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 433 - 467
Target Start/End: Complemental strand, 40262748 - 40262714
Alignment:
Q  433 caatgctatatatcaagaaagattttatcaagaaa 467  Q
    ||||| |||||||||||||||||||||||||||||    
T  40262748 caatgttatatatcaagaaagattttatcaagaaa 40262714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 495
Target Start/End: Original strand, 3989104 - 3989141
Alignment:
Q  458 tatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  3989104 tatcaagaaaattttaagaatgacatggcagaataatc 3989141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 23267861 - 23267921
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||    
T  23267861 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 23267921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 494
Target Start/End: Complemental strand, 3989342 - 3989283
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataat 494  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||||||| ||||||    
T  3989342 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataat 3989283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 4396 - 4461
Alignment:
Q  430 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  4396 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 431 - 495
Target Start/End: Original strand, 3069 - 3133
Alignment:
Q  431 agcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  3069 agcaatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 3133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 51; Significance: 5e-20; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 495
Target Start/End: Original strand, 8413 - 8467
Alignment:
Q  441 tatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8413 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 495
Target Start/End: Original strand, 15995 - 16049
Alignment:
Q  441 tatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15995 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 441 - 495
Target Start/End: Original strand, 25947 - 26001
Alignment:
Q  441 tatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25947 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 26001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 16250 - 16190
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  16250 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 16190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 26202 - 26142
Alignment:
Q  434 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 495  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  26202 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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