View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6869A_low_107 (Length: 243)

Name: NF6869A_low_107
Description: NF6869A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6869A_low_107
NF6869A_low_107
[»] chr8 (57 HSPs)
chr8 (102-243)||(43276819-43276960)
chr8 (101-243)||(32541186-32541321)
chr8 (107-243)||(17081623-17081752)
chr8 (104-243)||(17115504-17115636)
chr8 (138-243)||(25023299-25023404)
chr8 (138-243)||(31478069-31478174)
chr8 (138-243)||(31581687-31581792)
chr8 (102-243)||(44827365-44827499)
chr8 (141-243)||(45141503-45141605)
chr8 (138-243)||(28709300-28709405)
chr8 (138-243)||(28716657-28716762)
chr8 (138-243)||(36681495-36681600)
chr8 (140-243)||(39702301-39702404)
chr8 (145-243)||(27781102-27781200)
chr8 (138-243)||(38171475-38171580)
chr8 (138-243)||(42142783-42142888)
chr8 (138-243)||(39871258-39871362)
chr8 (145-243)||(41313375-41313473)
chr8 (138-243)||(8270899-8271004)
chr8 (93-243)||(23676826-23676970)
chr8 (152-243)||(31688098-31688189)
chr8 (138-243)||(1893889-1893995)
chr8 (107-243)||(6338287-6338416)
chr8 (145-243)||(39320114-39320212)
chr8 (138-243)||(10618799-10618904)
chr8 (138-243)||(16422822-16422927)
chr8 (138-243)||(22877973-22878078)
chr8 (141-243)||(37587766-37587869)
chr8 (145-243)||(41693954-41694055)
chr8 (138-243)||(32099529-32099635)
chr8 (138-243)||(34395395-34395501)
chr8 (138-243)||(24652261-24652365)
chr8 (144-243)||(11298089-11298188)
chr8 (138-243)||(37560577-37560682)
chr8 (138-243)||(40223131-40223236)
chr8 (188-243)||(36112889-36112944)
chr8 (152-243)||(44157204-44157295)
chr8 (145-243)||(3427669-3427767)
chr8 (150-243)||(9210991-9211084)
chr8 (188-243)||(36590180-36590235)
chr8 (186-243)||(2642466-2642523)
chr8 (157-243)||(39746987-39747073)
chr8 (141-225)||(16831530-16831614)
chr8 (152-243)||(13969982-13970073)
chr8 (152-243)||(43849255-43849346)
chr8 (145-243)||(7378848-7378946)
chr8 (152-222)||(42203452-42203522)
chr8 (145-242)||(29189775-29189872)
chr8 (196-243)||(11741151-11741198)
chr8 (192-242)||(40551856-40551906)
chr8 (190-243)||(22957354-22957407)
chr8 (138-178)||(11741206-11741246)
chr8 (188-243)||(1363840-1363895)
chr8 (151-243)||(3511224-3511316)
chr8 (204-243)||(35243400-35243439)
chr8 (209-243)||(2855146-2855180)
chr8 (187-232)||(35151040-35151085)
[»] chr5 (64 HSPs)
chr5 (103-243)||(24793937-24794070)
chr5 (138-243)||(12713305-12713410)
chr5 (138-243)||(12774569-12774674)
chr5 (138-243)||(14647396-14647501)
chr5 (141-243)||(30299694-30299796)
chr5 (107-243)||(36685785-36685914)
chr5 (138-243)||(2236555-2236660)
chr5 (138-243)||(4221512-4221617)
chr5 (138-243)||(8024023-8024128)
chr5 (138-243)||(19956346-19956451)
chr5 (138-243)||(30412651-30412756)
chr5 (140-243)||(2671409-2671512)
chr5 (107-243)||(32382818-32382947)
chr5 (138-243)||(5591581-5591686)
chr5 (138-243)||(39744581-39744686)
chr5 (138-243)||(13228512-13228616)
chr5 (136-243)||(39275414-39275521)
chr5 (145-243)||(5997933-5998031)
chr5 (138-243)||(1711242-1711347)
chr5 (138-243)||(32381713-32381818)
chr5 (138-243)||(29392146-29392250)
chr5 (152-243)||(43402451-43402542)
chr5 (141-243)||(6603949-6604051)
chr5 (145-243)||(9160731-9160829)
chr5 (145-243)||(27130333-27130431)
chr5 (145-243)||(35235766-35235864)
chr5 (145-243)||(39246876-39246973)
chr5 (138-243)||(1174777-1174882)
chr5 (138-243)||(10697262-10697367)
chr5 (138-243)||(19525742-19525847)
chr5 (138-243)||(30774231-30774336)
chr5 (143-243)||(26699145-26699245)
chr5 (143-243)||(26968878-26968978)
chr5 (138-243)||(9587225-9587331)
chr5 (138-243)||(12363651-12363757)
chr5 (138-243)||(11663930-11664035)
chr5 (138-243)||(6893418-6893522)
chr5 (152-243)||(5521305-5521396)
chr5 (152-243)||(15530442-15530533)
chr5 (141-243)||(31169026-31169128)
chr5 (138-243)||(35236706-35236812)
chr5 (138-243)||(3670271-3670376)
chr5 (138-243)||(13156925-13157030)
chr5 (152-243)||(648538-648629)
chr5 (143-243)||(5381983-5382082)
chr5 (152-243)||(36028030-36028121)
chr5 (141-243)||(15443452-15443554)
chr5 (138-243)||(3037464-3037569)
chr5 (187-243)||(4379300-4379356)
chr5 (187-243)||(7651682-7651738)
chr5 (143-243)||(11062946-11063047)
chr5 (187-243)||(2178802-2178858)
chr5 (138-243)||(35639933-35640038)
chr5 (145-243)||(19347705-19347804)
chr5 (186-243)||(22977244-22977301)
chr5 (138-243)||(3669534-3669639)
chr5 (138-222)||(25872268-25872352)
chr5 (145-243)||(11100801-11100899)
chr5 (152-243)||(2497570-2497661)
chr5 (186-243)||(23920498-23920555)
chr5 (190-243)||(9627193-9627246)
chr5 (186-243)||(13936233-13936290)
chr5 (145-243)||(16474771-16474869)
chr5 (187-243)||(6280494-6280550)
[»] chr2 (58 HSPs)
chr2 (104-243)||(28382725-28382857)
chr2 (103-243)||(4453568-4453701)
chr2 (107-243)||(15521439-15521575)
chr2 (138-243)||(3377383-3377488)
chr2 (138-243)||(9886983-9887088)
chr2 (138-243)||(16486873-16486978)
chr2 (138-243)||(36712581-36712686)
chr2 (107-243)||(8689007-8689135)
chr2 (102-243)||(18212082-18212216)
chr2 (140-243)||(38579053-38579156)
chr2 (138-243)||(5039766-5039871)
chr2 (138-243)||(36999480-36999585)
chr2 (138-243)||(41322747-41322852)
chr2 (136-243)||(13111787-13111895)
chr2 (107-243)||(21865213-21865343)
chr2 (107-243)||(650825-650953)
chr2 (142-243)||(8815208-8815309)
chr2 (138-243)||(40024987-40025092)
chr2 (140-243)||(2266197-2266300)
chr2 (141-243)||(37356162-37356265)
chr2 (145-243)||(24402097-24402195)
chr2 (145-243)||(43507607-43507705)
chr2 (138-243)||(2546369-2546474)
chr2 (138-243)||(4038385-4038490)
chr2 (138-243)||(4385570-4385675)
chr2 (146-243)||(31616431-31616528)
chr2 (143-243)||(10393080-10393180)
chr2 (140-243)||(10839625-10839728)
chr2 (152-243)||(39167756-39167847)
chr2 (138-243)||(6760649-6760754)
chr2 (138-243)||(43135608-43135713)
chr2 (145-243)||(17263798-17263896)
chr2 (138-243)||(6232325-6232430)
chr2 (150-243)||(7400436-7400529)
chr2 (138-243)||(26911503-26911607)
chr2 (145-243)||(29514832-29514929)
chr2 (138-243)||(41796787-41796892)
chr2 (143-243)||(40869404-40869504)
chr2 (138-243)||(13527949-13528054)
chr2 (138-222)||(18710181-18710265)
chr2 (138-243)||(38880827-38880933)
chr2 (138-243)||(44275654-44275758)
chr2 (152-243)||(8070665-8070756)
chr2 (186-243)||(43285657-43285714)
chr2 (187-243)||(38842875-38842931)
chr2 (188-243)||(42132708-42132763)
chr2 (141-243)||(10727824-10727926)
chr2 (138-228)||(6153509-6153598)
chr2 (187-243)||(7213706-7213762)
chr2 (138-235)||(8339970-8340067)
chr2 (145-242)||(23357030-23357128)
chr2 (192-243)||(9053175-9053226)
chr2 (156-243)||(24019895-24019982)
chr2 (138-222)||(7569776-7569861)
chr2 (205-243)||(15250163-15250201)
chr2 (208-241)||(4055951-4055984)
chr2 (145-178)||(13761777-13761810)
chr2 (145-177)||(22375955-22375987)
[»] chr3 (93 HSPs)
chr3 (102-243)||(40563416-40563550)
chr3 (104-243)||(29081334-29081466)
chr3 (107-243)||(26540930-26541059)
chr3 (138-243)||(16127192-16127297)
chr3 (138-243)||(38185764-38185869)
chr3 (141-243)||(44845621-44845723)
chr3 (141-243)||(45345061-45345163)
chr3 (138-243)||(25570373-25570478)
chr3 (138-243)||(28676943-28677048)
chr3 (138-243)||(35499595-35499700)
chr3 (138-243)||(37088278-37088383)
chr3 (138-243)||(37528776-37528881)
chr3 (138-243)||(46248017-46248122)
chr3 (138-243)||(2579980-2580085)
chr3 (138-243)||(8872867-8872972)
chr3 (138-243)||(24536607-24536712)
chr3 (138-243)||(40480074-40480179)
chr3 (138-243)||(44545224-44545329)
chr3 (138-243)||(44748839-44748944)
chr3 (102-243)||(19948371-19948505)
chr3 (145-243)||(37714018-37714116)
chr3 (145-243)||(39469914-39470012)
chr3 (145-243)||(52794896-52794994)
chr3 (145-243)||(55305162-55305260)
chr3 (138-243)||(38892039-38892144)
chr3 (145-243)||(4240279-4240377)
chr3 (102-242)||(41785774-41785907)
chr3 (145-243)||(43525744-43525842)
chr3 (145-243)||(53779032-53779130)
chr3 (138-243)||(21707145-21707250)
chr3 (138-243)||(52857890-52857995)
chr3 (138-243)||(54672233-54672337)
chr3 (143-243)||(42217662-42217762)
chr3 (145-243)||(54541988-54542086)
chr3 (150-243)||(24628252-24628345)
chr3 (138-243)||(29718254-29718358)
chr3 (138-243)||(47897659-47897764)
chr3 (138-243)||(49853096-49853201)
chr3 (138-243)||(52166143-52166248)
chr3 (145-243)||(48942992-48943088)
chr3 (138-243)||(46318812-46318918)
chr3 (145-243)||(50317082-50317180)
chr3 (138-243)||(46972027-46972132)
chr3 (138-243)||(50499756-50499861)
chr3 (143-243)||(30814303-30814403)
chr3 (152-243)||(39876622-39876713)
chr3 (152-243)||(41246257-41246348)
chr3 (145-243)||(52225286-52225384)
chr3 (138-243)||(30864421-30864525)
chr3 (138-243)||(47173562-47173667)
chr3 (186-243)||(2121869-2121926)
chr3 (141-243)||(33391900-33392002)
chr3 (150-243)||(46627550-46627644)
chr3 (158-243)||(2851831-2851916)
chr3 (138-243)||(12063781-12063886)
chr3 (192-243)||(21603846-21603897)
chr3 (188-243)||(51709055-51709110)
chr3 (145-243)||(193398-193496)
chr3 (138-237)||(35100181-35100282)
chr3 (138-243)||(48378220-48378325)
chr3 (150-242)||(45693460-45693552)
chr3 (190-243)||(30548790-30548843)
chr3 (190-243)||(43740331-43740384)
chr3 (145-243)||(44947254-44947352)
chr3 (138-243)||(45368604-45368709)
chr3 (137-243)||(37489977-37490083)
chr3 (187-228)||(52931200-52931241)
chr3 (138-243)||(42465080-42465185)
chr3 (150-215)||(51950362-51950427)
chr3 (151-243)||(39719361-39719452)
chr3 (197-243)||(42497047-42497093)
chr3 (138-243)||(20450452-20450557)
chr3 (138-178)||(24536807-24536847)
chr3 (154-242)||(27446437-27446525)
chr3 (150-243)||(32026462-32026555)
chr3 (138-243)||(41518355-41518460)
chr3 (138-178)||(52363036-52363076)
chr3 (100-159)||(889676-889734)
chr3 (188-243)||(7041105-7041160)
chr3 (159-243)||(33897946-33898030)
chr3 (204-243)||(51003307-51003346)
chr3 (145-201)||(52788677-52788733)
chr3 (209-243)||(52868232-52868266)
chr3 (145-243)||(52595387-52595485)
chr3 (138-178)||(28394172-28394212)
chr3 (187-243)||(29203080-29203136)
chr3 (190-221)||(32982980-32983011)
chr3 (138-168)||(889706-889736)
chr3 (145-200)||(5505852-5505907)
chr3 (145-178)||(2187314-2187347)
chr3 (157-243)||(2598608-2598694)
chr3 (145-178)||(31558316-31558349)
chr3 (203-243)||(24350318-24350358)
[»] chr4 (87 HSPs)
chr4 (104-243)||(45906102-45906234)
chr4 (107-243)||(53407156-53407284)
chr4 (107-243)||(35777435-35777564)
chr4 (138-243)||(42116886-42116991)
chr4 (138-243)||(47417524-47417629)
chr4 (138-243)||(55495929-55496034)
chr4 (138-243)||(56372425-56372530)
chr4 (107-243)||(12234016-12234145)
chr4 (138-243)||(7706362-7706467)
chr4 (138-243)||(8829864-8829969)
chr4 (138-243)||(18582834-18582939)
chr4 (138-243)||(19513931-19514036)
chr4 (138-243)||(46895273-46895378)
chr4 (138-242)||(22038407-22038511)
chr4 (131-243)||(52669977-52670089)
chr4 (145-243)||(11151988-11152086)
chr4 (107-243)||(11600649-11600778)
chr4 (145-243)||(27397815-27397913)
chr4 (138-243)||(4392774-4392879)
chr4 (138-243)||(4517240-4517345)
chr4 (138-243)||(28307245-28307350)
chr4 (138-243)||(39087607-39087712)
chr4 (148-243)||(31678969-31679064)
chr4 (145-243)||(23867918-23868016)
chr4 (145-243)||(29663926-29664024)
chr4 (141-243)||(37115332-37115434)
chr4 (138-243)||(8941894-8941999)
chr4 (138-243)||(22892518-22892623)
chr4 (138-243)||(22944182-22944287)
chr4 (145-242)||(33005178-33005275)
chr4 (145-243)||(29413528-29413626)
chr4 (138-243)||(53273108-53273213)
chr4 (138-243)||(55828994-55829099)
chr4 (138-243)||(9043659-9043765)
chr4 (145-243)||(25440533-25440631)
chr4 (145-243)||(35468012-35468110)
chr4 (138-243)||(43225726-43225832)
chr4 (138-243)||(35580994-35581099)
chr4 (138-243)||(35822348-35822453)
chr4 (138-243)||(55764550-55764654)
chr4 (145-243)||(3009708-3009806)
chr4 (145-243)||(4355641-4355739)
chr4 (145-243)||(4939435-4939532)
chr4 (158-243)||(21369890-21369975)
chr4 (142-243)||(29656742-29656843)
chr4 (150-243)||(37831924-37832017)
chr4 (138-243)||(55856576-55856678)
chr4 (138-222)||(25199366-25199450)
chr4 (138-222)||(45780807-45780891)
chr4 (138-233)||(29656597-29656692)
chr4 (152-243)||(33114979-33115070)
chr4 (145-228)||(36008069-36008152)
chr4 (186-243)||(9032044-9032101)
chr4 (138-243)||(37970285-37970389)
chr4 (152-243)||(56270140-56270231)
chr4 (138-243)||(15635932-15636037)
chr4 (188-243)||(23162641-23162696)
chr4 (152-243)||(26826525-26826616)
chr4 (186-243)||(5465459-5465516)
chr4 (138-240)||(44442072-44442174)
chr4 (187-243)||(55358387-55358443)
chr4 (152-243)||(11050320-11050412)
chr4 (188-243)||(30366195-30366250)
chr4 (145-243)||(4391757-4391855)
chr4 (138-243)||(51011114-51011220)
chr4 (150-243)||(23113525-23113618)
chr4 (191-243)||(35842644-35842696)
chr4 (138-243)||(31338549-31338656)
chr4 (152-243)||(52708047-52708138)
chr4 (150-243)||(22430637-22430730)
chr4 (138-243)||(25235135-25235240)
chr4 (189-243)||(27185681-27185737)
chr4 (143-222)||(17715579-17715658)
chr4 (145-243)||(35190665-35190763)
chr4 (138-243)||(36196864-36196969)
chr4 (152-243)||(20511413-20511504)
chr4 (144-243)||(21633865-21633964)
chr4 (190-243)||(4465520-4465573)
chr4 (210-243)||(20148851-20148884)
chr4 (202-243)||(42085771-42085812)
chr4 (145-243)||(55684692-55684790)
chr4 (193-233)||(44525659-44525699)
chr4 (138-177)||(19169165-19169204)
chr4 (188-243)||(36486434-36486489)
chr4 (188-243)||(43078245-43078300)
chr4 (205-243)||(44525694-44525732)
chr4 (141-175)||(45520101-45520135)
[»] chr7 (54 HSPs)
chr7 (97-243)||(36246432-36246570)
chr7 (138-243)||(10312085-10312190)
chr7 (138-243)||(42587439-42587544)
chr7 (138-243)||(43254097-43254202)
chr7 (138-243)||(45686972-45687077)
chr7 (138-243)||(32168827-32168932)
chr7 (145-243)||(27089712-27089810)
chr7 (145-243)||(27188491-27188589)
chr7 (138-243)||(21254753-21254858)
chr7 (138-243)||(40637216-40637321)
chr7 (138-243)||(42375839-42375943)
chr7 (138-243)||(44743711-44743816)
chr7 (145-243)||(31511301-31511399)
chr7 (138-243)||(21374627-21374732)
chr7 (107-243)||(36436124-36436252)
chr7 (142-243)||(47471018-47471119)
chr7 (138-243)||(43134399-43134503)
chr7 (145-243)||(35587580-35587678)
chr7 (145-243)||(40106061-40106159)
chr7 (145-243)||(48832109-48832207)
chr7 (138-243)||(483038-483143)
chr7 (138-243)||(9487401-9487506)
chr7 (138-243)||(40258851-40258956)
chr7 (141-243)||(33203724-33203826)
chr7 (145-243)||(45222129-45222227)
chr7 (140-243)||(21313845-21313950)
chr7 (102-240)||(21741936-21742068)
chr7 (138-243)||(44596604-44596709)
chr7 (107-243)||(48313480-48313608)
chr7 (152-243)||(19832046-19832137)
chr7 (138-241)||(49148326-49148429)
chr7 (186-243)||(33026918-33026975)
chr7 (145-243)||(34709234-34709332)
chr7 (141-243)||(47587161-47587262)
chr7 (186-243)||(48590756-48590813)
chr7 (138-243)||(27655729-27655834)
chr7 (138-243)||(36407222-36407327)
chr7 (143-243)||(28425667-28425767)
chr7 (141-243)||(17192498-17192599)
chr7 (153-243)||(21316640-21316730)
chr7 (150-236)||(38481286-38481372)
chr7 (138-243)||(11466095-11466200)
chr7 (155-243)||(9485727-9485815)
chr7 (144-243)||(17844544-17844643)
chr7 (145-243)||(23029790-23029889)
chr7 (186-243)||(12345123-12345180)
chr7 (145-243)||(1342777-1342875)
chr7 (187-243)||(38531238-38531294)
chr7 (188-243)||(22642307-22642362)
chr7 (141-243)||(48620455-48620556)
chr7 (152-243)||(46757717-46757809)
chr7 (186-243)||(46879580-46879637)
chr7 (203-243)||(24170803-24170843)
chr7 (188-237)||(7884741-7884790)
[»] chr1 (72 HSPs)
chr1 (102-243)||(1917994-1918127)
chr1 (107-243)||(13121617-13121745)
chr1 (138-243)||(33561928-33562033)
chr1 (138-243)||(39826597-39826702)
chr1 (138-243)||(42064350-42064455)
chr1 (107-243)||(44909814-44909942)
chr1 (107-243)||(17046702-17046831)
chr1 (138-243)||(17499918-17500023)
chr1 (104-243)||(19898941-19899073)
chr1 (138-243)||(26204271-26204376)
chr1 (138-243)||(29586155-29586260)
chr1 (138-243)||(31150458-31150563)
chr1 (102-243)||(36301138-36301270)
chr1 (107-243)||(33524501-33524630)
chr1 (138-243)||(2497919-2498024)
chr1 (138-243)||(36838728-36838833)
chr1 (138-243)||(47134564-47134669)
chr1 (136-243)||(26843746-26843853)
chr1 (138-243)||(30721656-30721762)
chr1 (145-243)||(50351036-50351134)
chr1 (138-243)||(2479157-2479262)
chr1 (138-243)||(7710987-7711092)
chr1 (138-243)||(38676486-38676591)
chr1 (145-243)||(38967497-38967594)
chr1 (138-242)||(32368373-32368477)
chr1 (138-243)||(29704117-29704222)
chr1 (144-243)||(49220506-49220605)
chr1 (145-243)||(322869-322967)
chr1 (145-243)||(3270663-3270760)
chr1 (138-243)||(3660942-3661047)
chr1 (138-243)||(15348821-15348926)
chr1 (138-243)||(25601983-25602088)
chr1 (138-243)||(34319386-34319491)
chr1 (141-243)||(1507776-1507879)
chr1 (145-243)||(34086970-34087068)
chr1 (138-243)||(30774082-30774183)
chr1 (145-238)||(46369809-46369904)
chr1 (140-243)||(15313243-15313345)
chr1 (138-243)||(29374327-29374432)
chr1 (187-243)||(37703716-37703772)
chr1 (188-243)||(28429076-28429131)
chr1 (187-243)||(37672383-37672439)
chr1 (145-243)||(39583100-39583198)
chr1 (191-243)||(9770006-9770058)
chr1 (138-243)||(50171330-50171435)
chr1 (188-243)||(22098965-22099020)
chr1 (188-243)||(36043333-36043388)
chr1 (188-243)||(49185218-49185273)
chr1 (186-243)||(3391165-3391222)
chr1 (145-243)||(7781197-7781295)
chr1 (137-243)||(8221268-8221374)
chr1 (194-243)||(43727074-43727123)
chr1 (137-243)||(50540768-50540874)
chr1 (138-243)||(51423017-51423123)
chr1 (150-243)||(34318415-34318508)
chr1 (151-243)||(25134858-25134950)
chr1 (107-212)||(9169051-9169149)
chr1 (189-243)||(42614168-42614222)
chr1 (152-243)||(49240314-49240405)
chr1 (201-243)||(49822200-49822242)
chr1 (187-243)||(5697523-5697579)
chr1 (138-243)||(18347449-18347553)
chr1 (151-243)||(44719004-44719096)
chr1 (151-243)||(52703144-52703236)
chr1 (189-231)||(30495240-30495282)
chr1 (137-243)||(46088033-46088139)
chr1 (138-222)||(7024840-7024924)
chr1 (138-177)||(22099688-22099726)
chr1 (152-222)||(52071222-52071292)
chr1 (138-178)||(40719495-40719535)
chr1 (203-243)||(44956340-44956380)
chr1 (203-243)||(46056459-46056499)
[»] chr6 (38 HSPs)
chr6 (103-243)||(32731724-32731857)
chr6 (138-243)||(2442418-2442523)
chr6 (138-243)||(31100063-31100168)
chr6 (138-243)||(31452002-31452107)
chr6 (138-243)||(34232963-34233068)
chr6 (107-243)||(12297334-12297463)
chr6 (145-243)||(10856133-10856231)
chr6 (138-243)||(1806363-1806468)
chr6 (138-243)||(20804983-20805088)
chr6 (107-243)||(14227584-14227712)
chr6 (141-243)||(30811197-30811299)
chr6 (145-243)||(558360-558459)
chr6 (138-228)||(34903953-34904043)
chr6 (143-243)||(33453734-33453834)
chr6 (152-243)||(12432669-12432760)
chr6 (145-243)||(34685064-34685161)
chr6 (152-243)||(33540774-33540865)
chr6 (145-243)||(34439683-34439781)
chr6 (138-243)||(7317659-7317764)
chr6 (144-228)||(29414974-29415058)
chr6 (145-243)||(3108054-3108153)
chr6 (145-243)||(28076423-28076521)
chr6 (138-243)||(3636689-3636793)
chr6 (152-243)||(5681527-5681618)
chr6 (145-240)||(11015590-11015685)
chr6 (188-243)||(5943035-5943090)
chr6 (151-243)||(29823084-29823176)
chr6 (152-243)||(5301650-5301741)
chr6 (152-235)||(6709752-6709835)
chr6 (190-243)||(31049379-31049432)
chr6 (192-243)||(2970722-2970773)
chr6 (152-243)||(23648201-23648292)
chr6 (161-243)||(6104719-6104801)
chr6 (202-243)||(12140927-12140968)
chr6 (152-243)||(7292597-7292688)
chr6 (204-243)||(21894311-21894350)
chr6 (209-243)||(20563458-20563492)
chr6 (214-243)||(15591199-15591228)
[»] scaffold0116 (1 HSPs)
scaffold0116 (138-243)||(22588-22693)
[»] scaffold0031 (1 HSPs)
scaffold0031 (138-243)||(126808-126913)
[»] scaffold0122 (1 HSPs)
scaffold0122 (138-243)||(12765-12870)
[»] scaffold0075 (1 HSPs)
scaffold0075 (107-243)||(27182-27312)
[»] scaffold1632 (1 HSPs)
scaffold1632 (138-243)||(85-190)
[»] scaffold0009 (1 HSPs)
scaffold0009 (145-243)||(192013-192111)
[»] scaffold0246 (1 HSPs)
scaffold0246 (138-243)||(7050-7155)
[»] scaffold0027 (1 HSPs)
scaffold0027 (138-222)||(41814-41898)
[»] scaffold0002 (2 HSPs)
scaffold0002 (152-243)||(431265-431356)
scaffold0002 (190-243)||(119287-119340)
[»] scaffold0197 (2 HSPs)
scaffold0197 (138-228)||(28148-28238)
scaffold0197 (145-243)||(30225-30323)
[»] scaffold0011 (1 HSPs)
scaffold0011 (152-243)||(63851-63942)
[»] scaffold0087 (1 HSPs)
scaffold0087 (186-243)||(53069-53126)
[»] scaffold0016 (2 HSPs)
scaffold0016 (152-243)||(93434-93525)
scaffold0016 (214-243)||(84325-84354)
[»] scaffold0166 (1 HSPs)
scaffold0166 (103-178)||(36320-36388)
[»] scaffold0362 (1 HSPs)
scaffold0362 (187-243)||(5451-5506)


Alignment Details
Target: chr8 (Bit Score: 97; Significance: 9e-48; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 102 - 243
Target Start/End: Complemental strand, 43276960 - 43276819
Alignment:
Q  102 taggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaaca 201  Q
    |||| ||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||    
T  43276960 tagggtctgtttggttaaccccaaaaaagagcttttagcttttagcttatagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaaca 43276861  T
Q  202 ctttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43276860 ctttttcaccatgagcttatagcttatttcacgagcttataa 43276819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 101 - 243
Target Start/End: Original strand, 32541186 - 32541321
Alignment:
Q  101 ataggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaac 200  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  32541186 ataggctctgtttggttaaccccaaaaagtagctt-------ttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaac 32541278  T
Q  201 actttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32541279 actttttcaccatgagcttatagcttatttcacgagcttataa 32541321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 17081623 - 17081752
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  17081623 tctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttt 17081715  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  17081716 tcaccatgagcttatagcttatttcacgagcttataa 17081752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 243
Target Start/End: Original strand, 17115504 - 17115636
Alignment:
Q  104 ggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacact 203  Q
    |||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  17115504 ggctctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagctcgtttgaaaaaaaaagctctgtttggtaacact 17115596  T
Q  204 ttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17115597 ttttcaccatgagcttatagcttatttcacgagcttataa 17115636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 25023299 - 25023404
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25023299 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 25023398  T
Q  238 ttataa 243  Q
    ||||||    
T  25023399 ttataa 25023404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 31478069 - 31478174
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31478069 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 31478168  T
Q  238 ttataa 243  Q
    ||||||    
T  31478169 ttataa 31478174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 31581687 - 31581792
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31581687 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 31581786  T
Q  238 ttataa 243  Q
    ||||||    
T  31581787 ttataa 31581792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 243
Target Start/End: Complemental strand, 44827499 - 44827365
Alignment:
Q  102 taggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaaca 201  Q
    |||||||||||||||||||| ||||||       | ||||||||| |||||||||||||||||||||||||||||||       ||||||||||||||||    
T  44827499 taggctctgtttggttaacctcaaaaa-------agagcttttagtttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaaca 44827407  T
Q  202 ctttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44827406 ctttttcaccatgagcttatagcttatttcacgagcttataa 44827365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 45141605 - 45141503
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45141605 ttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 45141506  T
Q  241 taa 243  Q
    |||    
T  45141505 taa 45141503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 28709300 - 28709405
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28709300 agcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 28709399  T
Q  238 ttataa 243  Q
    ||||||    
T  28709400 ttataa 28709405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 28716657 - 28716762
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28716657 agcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 28716756  T
Q  238 ttataa 243  Q
    ||||||    
T  28716757 ttataa 28716762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 36681600 - 36681495
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36681600 agcttttaacttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 36681501  T
Q  238 ttataa 243  Q
    ||||||    
T  36681500 ttataa 36681495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 39702301 - 39702404
Alignment:
Q  140 cttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctt 239  Q
    |||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39702301 cttttaacttttagcttatagcttataagctcgtttgacataaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctt 39702400  T
Q  240 ataa 243  Q
    ||||    
T  39702401 ataa 39702404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 27781102 - 27781200
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27781102 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 27781200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 38171580 - 38171475
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||| ||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38171580 agcttttagcttttagtttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttgttcaccatgagcttatagcttatttcacgagc 38171481  T
Q  238 ttataa 243  Q
    ||||||    
T  38171480 ttataa 38171475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 42142888 - 42142783
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||| |||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42142888 agcttttagcttttaacttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 42142789  T
Q  238 ttataa 243  Q
    ||||||    
T  42142788 ttataa 42142783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 39871258 - 39871362
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39871258 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaa-gctctatttggtaacactttttcaccatgagcttatagcttatttcacgagc 39871356  T
Q  238 ttataa 243  Q
    ||||||    
T  39871357 ttataa 39871362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 41313375 - 41313473
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41313375 agcttttagcttatagcttataaactcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 41313473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 8270899 - 8271004
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||| ||||| |||||||||||||||||||||||||       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8270899 agcttttagtttttaccttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagc 8270998  T
Q  238 ttataa 243  Q
    ||||||    
T  8270999 ttataa 8271004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 93 - 243
Target Start/End: Original strand, 23676826 - 23676970
Alignment:
Q  93 aaatatacataggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctg 191  Q
    ||||||||||||| ||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||         | |||     
T  23676826 aaatatacatagggtctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagctcgtttgataaaaaaaagttctc 23676918  T
Q  192 tttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23676919 tttggtaacactttttcaccatgagcttatagcttatttcacgaacttataa 23676970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 31688189 - 31688098
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31688189 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 31688098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 1893995 - 1893889
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    ||||||||||||||||||||||||||||||||||||||||         | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1893995 agcttttagcttttagcttatagcttataagctcgtttgataaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 1893896  T
Q  237 cttataa 243  Q
    |||||||    
T  1893895 cttataa 1893889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 6338287 - 6338416
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | |||||||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||    
T  6338287 tctgtttggttaaccccaaaaa-------agagcttttagcttctagcttatagcttataagctcgtttgataaaaaaaactctgtttggtaacactttt 6338379  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    | |||||||||||||||||||||||||||||||||||    
T  6338380 ttaccatgagcttatagcttatttcacgagcttataa 6338416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 39320212 - 39320114
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||  |||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39320212 agcttttagcttatagcttataaattcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 39320114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 10618799 - 10618904
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||| ||||||||||||||||||||||||||||||        | | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10618799 agcttttagtttttagcttatagcttataagctcgtttgataaaaaaagttttgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 10618898  T
Q  238 ttataa 243  Q
    ||||||    
T  10618899 ttataa 10618904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 16422822 - 16422927
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||| |||||||||||||||        ||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  16422822 agcttttagcttttagcttatagcctataagctcgtttgataaaaaaagctctgtttagtaacactttttcatcatgagcttatagcttatttcacgagc 16422921  T
Q  238 ttataa 243  Q
    ||||||    
T  16422922 ttataa 16422927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 22878078 - 22877973
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||| ||||| ||| |||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22878078 agcttatagctcttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgaacttatagcttatttcacgagc 22877979  T
Q  238 ttataa 243  Q
    ||||||    
T  22877978 ttataa 22877973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 37587869 - 37587766
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctt 239  Q
    |||||||| ||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37587869 ttttagctcttagcttatagcttataagctcgtttgataaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctt 37587770  T
Q  240 ataa 243  Q
    ||||    
T  37587769 ataa 37587766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 41694055 - 41693954
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnn---gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttat 241  Q
    ||||||||||||||||||||||||||||||||||          |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41694055 agcttttagcttatagcttataagctcgtttgacaaaatttttagctctgtttggtaacattttttcaccatgagcttatagcttatttcacgagcttat 41693956  T
Q  242 aa 243  Q
    ||    
T  41693955 aa 41693954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 32099529 - 32099635
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnng-ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    ||||| ||||| |||||||||||||||||||||||||||||         ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32099529 agcttatagctcttagcttatagcttataagctcgtttgacaaaaaaaatctctgtttgataacactttttcaccatgagcttatagcttatttcacgag 32099628  T
Q  237 cttataa 243  Q
    |||||||    
T  32099629 cttataa 32099635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 34395501 - 34395395
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnng-ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    ||||||||||||||| |||||||||||||||||||||||||         ||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  34395501 agcttttagcttttaacttatagcttataagctcgtttgacaaaaaaaaactctgtttgataacactttttgaccatgagcttatagcttatttcacgag 34395402  T
Q  237 cttataa 243  Q
    |||||||    
T  34395401 cttataa 34395395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 24652261 - 24652365
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| || ||| |||||||||||||||||||||||||       | ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24652261 agcttttacctcttatcttatagcttataagctcgtttgacaaagaaagttctgtttggtaacactttt-caccatgagcttatagcttatttcacgagc 24652359  T
Q  238 ttataa 243  Q
    ||||||    
T  24652360 ttataa 24652365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 11298188 - 11298089
Alignment:
Q  144 tagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| |||||||||||||||||||||||||||||        ||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||    
T  11298188 tagctcttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacattttttcatcatcagcttatagcttatttcacgagcttataa 11298089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 37560682 - 37560577
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| ||| |||||||||||||||||||||| ||       | |||||||||||||||||||| | ||||| |||||||||||||||||||||    
T  37560682 agcttttagctcttaacttatagcttataagctcgtttcacaaaaaaagttctgtttggtaacactttttgatcatgaacttatagcttatttcacgagc 37560583  T
Q  238 ttataa 243  Q
    ||||||    
T  37560582 ttataa 37560577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 40223236 - 40223131
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn--gctctgtttggtaacactttttcaccatgagcttatagcttatttcacga 235  Q
    ||||||||||| ||||||||||||||||||||| |||||||         ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  40223236 agcttttagctcttagcttatagcttataagcttgtttgacaaaaaaaaagctctgtttggtaacacttt--caccatgagcttatagcttatttcacga 40223139  T
Q  236 gcttataa 243  Q
    ||||||||    
T  40223138 gcttataa 40223131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 36112944 - 36112889
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36112944 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 36112889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 44157204 - 44157295
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||| ||||         |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44157204 agcttatagcttataagctcgtctgacaaaaaaaattctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataa 44157295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 3427767 - 3427669
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| |||||||||| |||||||||||| ||||       ||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||    
T  3427767 agcttatagcttataggttataagctcgtctgacaaaaaaagctctgtttggtaatgctttttcaccatgaccttatagcttatttcacgagcttataa 3427669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 9210991 - 9211084
Alignment:
Q  150 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||| | |||||||       |||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  9210991 ttagcttatagcttataagtttgtttgacaaaaaaagctccgtttgataacactttttgaccatgagcttataacttatttcacgagcttataa 9211084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 36590180 - 36590235
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  36590180 tctgtttggtaacacttttttaccatgagcttataacttatttcacgagcttataa 36590235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 2642523 - 2642466
Alignment:
Q  186 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  2642523 gctctgtttggtaatattttttgaccatgagcttatagcttatttcacgagcttataa 2642466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 39747073 - 39746987
Alignment:
Q  157 atagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||       ||||||||||||||   |||||||||| ||||||||| ||||||||||||||||||||    
T  39747073 atagcttataagctcgtttgaccaaaaaagctctgtttggtaatgttttttcaccacgagcttataacttatttcacgagcttataa 39746987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 16831530 - 16831614
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagct 225  Q
    |||||||| ||| ||||||||||||||| |||||||||       | || |||||||||||||||||||||||||||||||||||    
T  16831530 ttttagctcttaacttatagcttataagttcgtttgacaaaaaaagttcagtttggtaacactttttcaccatgagcttatagct 16831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 13969982 - 13970073
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||        |||||||||||||     ||||||||| ||||||||||||||||||||||||||||||    
T  13969982 agcttatagcttataagctcgtttgatcaaaaaagctctgtttggtactgtcttttcaccacgagcttatagcttatttcacgagcttataa 13970073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 43849346 - 43849255
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||| ||||||||||||||||||       |||||||||||||||| ||||| || | ||||||||||||||||| | ||||||||||    
T  43849346 agcttataacttataagctcgtttgacaaaaaaagctctgtttggtaacaattttttacaacgagcttatagcttattttatgagcttataa 43849255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 7378848 - 7378946
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||| |||||||||||||| |||| ||||       ||||||||||||||| |||||| || | ||||||||||||||||||| ||||||||||    
T  7378848 agcttatagtttatagcttataagttcgtctgacaaaagaagctctgtttggtaacgcttttttacaacgagcttatagcttatttcatgagcttataa 7378946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 42203522 - 42203452
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttata 222  Q
    ||||| |||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||    
T  42203522 agcttttagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccacgagcttata 42203452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 29189872 - 29189775
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    ||||| ||||||||||||||||| |||||||||        ||||||||| |||||  ||||| || | |||||||||||||||||||||||||||||    
T  29189872 agcttatagcttatagcttataaactcgtttgataagaaaagctctgtttagtaacggttttttactacgagcttatagcttatttcacgagcttata 29189775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 11741198 - 11741151
Alignment:
Q  196 gtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||    
T  11741198 gtaatacttttttaccatgagcttatagcttatttcacgagcttataa 11741151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 40551856 - 40551906
Alignment:
Q  192 tttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    |||||||||| |||||||||||||| ||||||||||||||| |||||||||    
T  40551856 tttggtaacattttttcaccatgagtttatagcttatttcatgagcttata 40551906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 22957354 - 22957407
Alignment:
Q  190 tgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||| |||||||||    
T  22957354 tgtttcgtaacatttttttaccatgagcttatagcttatttcacaagcttataa 22957407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 11741246 - 11741206
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgac 178  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  11741246 agcttttagcttttagtttatagcttataagctcgtttgac 11741206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 1363895 - 1363840
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||| | ||||| |||||||||||||| ||||||||||||| ||||||    
T  1363895 tctgtttggtaatatttttttaccatgagcttataacttatttcacgagtttataa 1363840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 3511224 - 3511316
Alignment:
Q  151 tagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||| |||| ||||        ||| |||||||||  ||||||  |||||||||| |||||||||||||||||||||||    
T  3511224 tagcttatagcttataagttcgtctgacgaaaaaaactcagtttggtaatgctttttagccatgagcttgtagcttatttcacgagcttataa 3511316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 35243439 - 35243400
Alignment:
Q  204 ttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  35243439 ttttcaccacgagcttatatcttatttcacgagcttataa 35243400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 2855146 - 2855180
Alignment:
Q  209 accatgagcttatagcttatttcacgagcttataa 243  Q
    |||| ||||||||||||||||||||||||||||||    
T  2855146 accacgagcttatagcttatttcacgagcttataa 2855180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 35151040 - 35151085
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttatttca 232  Q
    ||||||||||||| | |||||||||| ||||||||| |||||||||    
T  35151040 ctctgtttggtaatattttttcaccacgagcttataacttatttca 35151085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 5e-46; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 103 - 243
Target Start/End: Original strand, 24793937 - 24794070
Alignment:
Q  103 aggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacac 202  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  24793937 aggctctgtttggttaaccccaaaaagtagctt-------ttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacac 24794029  T
Q  203 tttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24794030 tttttcaccatgagcttatagcttatttcacgagcttataa 24794070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 12713305 - 12713410
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12713305 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 12713404  T
Q  238 ttataa 243  Q
    ||||||    
T  12713405 ttataa 12713410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 12774569 - 12774674
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12774569 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 12774668  T
Q  238 ttataa 243  Q
    ||||||    
T  12774669 ttataa 12774674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 14647501 - 14647396
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14647501 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 14647402  T
Q  238 ttataa 243  Q
    ||||||    
T  14647401 ttataa 14647396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 30299694 - 30299796
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30299694 ttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 30299793  T
Q  241 taa 243  Q
    |||    
T  30299794 taa 30299796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 36685785 - 36685914
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | ||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||    
T  36685785 tctgtttggttaaccccaaaaa-------agagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttt 36685877  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  36685878 tcaccatgagcttatagcttatttcacgagcttataa 36685914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 2236660 - 2236555
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2236660 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 2236561  T
Q  238 ttataa 243  Q
    ||||||    
T  2236560 ttataa 2236555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 4221617 - 4221512
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4221617 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 4221518  T
Q  238 ttataa 243  Q
    ||||||    
T  4221517 ttataa 4221512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 8024128 - 8024023
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||||||||||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8024128 agcttttagcttttagcttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 8024029  T
Q  238 ttataa 243  Q
    ||||||    
T  8024028 ttataa 8024023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 19956451 - 19956346
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19956451 agcttttagcttttagcttatagcttataagctcgtttaacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 19956352  T
Q  238 ttataa 243  Q
    ||||||    
T  19956351 ttataa 19956346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 30412756 - 30412651
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30412756 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagtttatagcttatttcacgagc 30412657  T
Q  238 ttataa 243  Q
    ||||||    
T  30412656 ttataa 30412651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 2671409 - 2671512
Alignment:
Q  140 cttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctt 239  Q
    |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2671409 cttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacaagctt 2671508  T
Q  240 ataa 243  Q
    ||||    
T  2671509 ataa 2671512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 32382818 - 32382947
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||        | |||||||||||||||||||    
T  32382818 tctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagctcgtttgataaaaaaagttctgtttggtaacactttt 32382910  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  32382911 tcaccatgagcttatagcttatttcacgagcttataa 32382947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 5591581 - 5591686
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5591581 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgaac 5591680  T
Q  238 ttataa 243  Q
    ||||||    
T  5591681 ttataa 5591686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 39744686 - 39744581
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  39744686 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgttttgtaacattttttcaccatgagcttatagcttatttcacgagc 39744587  T
Q  238 ttataa 243  Q
    ||||||    
T  39744586 ttataa 39744581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 13228616 - 13228512
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13228616 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaa-gctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagc 13228518  T
Q  238 ttataa 243  Q
    ||||||    
T  13228517 ttataa 13228512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 39275414 - 39275521
Alignment:
Q  136 atagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacga 235  Q
    ||||||||||||||||| |||||||||||||||||||||||||       | |||||||||||||||||||| |||||||||||||||||||||||||||    
T  39275414 atagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacacttttttaccatgagcttatagcttatttcacga 39275513  T
Q  236 gcttataa 243  Q
    ||||||||    
T  39275514 gcttataa 39275521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 5998031 - 5997933
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5998031 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccgtgagcttatagcttatttcacgagcttataa 5997933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 1711347 - 1711242
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  1711347 agcttttagcttatagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttataacttatttcacaagc 1711248  T
Q  238 ttataa 243  Q
    ||||||    
T  1711247 ttataa 1711242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 32381818 - 32381713
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||||||||||||||||||||| |||||||        || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32381818 agcttttagcttttagcttatagcttataagcttgtttgacaaaaaaaactatgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 32381719  T
Q  238 ttataa 243  Q
    ||||||    
T  32381718 ttataa 32381713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 29392250 - 29392146
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29392250 agcttttagcttttagcttatagtttataagctcgtttgacaaaaaa-gctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagc 29392152  T
Q  238 ttataa 243  Q
    ||||||    
T  29392151 ttataa 29392146  T

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Target: chr5; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 43402451 - 43402542
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43402451 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 43402542  T

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Target: chr5; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 6604051 - 6603949
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    |||||||||||||||||||||||||||| |||||||||       |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  6604051 ttttagcttttagcttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacattttttcaccgtgagcttatagcttatttcacgagctta 6603952  T
Q  241 taa 243  Q
    |||    
T  6603951 taa 6603949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 9160829 - 9160731
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||| || ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9160829 agcttttagcttttaacttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 9160731  T

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Target: chr5; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 27130333 - 27130431
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||| ||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27130333 agcttttagcttatagcttataagctcttttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 27130431  T

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Target: chr5; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 35235864 - 35235766
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35235864 agcttttagcttttagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 35235766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 39246973 - 39246876
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39246973 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttt-caccatgagcttatagcttatttcacgagcttataa 39246876  T

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Target: chr5; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 1174777 - 1174882
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||| ||       | |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1174777 agcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagttctgtttggtaacactttttgaccatgagcttatagcttatttcacgagc 1174876  T
Q  238 ttataa 243  Q
    ||||||    
T  1174877 ttataa 1174882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 10697262 - 10697367
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||| ||| ||       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10697262 agcttttagctcttagcttatagcttataagctcatttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagc 10697361  T
Q  238 ttataa 243  Q
    ||||||    
T  10697362 ttataa 10697367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 19525742 - 19525847
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||| ||||||| |||||| ||||||||||       ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19525742 agcttttagcttttaccttatagtttataaactcgtttgacaaaaaaagctctgtttggtaacaccttttcaccatgagcttatagcttatttcacgagc 19525841  T
Q  238 ttataa 243  Q
    ||||||    
T  19525842 ttataa 19525847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 30774336 - 30774231
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||| ||       |||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  30774336 agcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccataagcttatagcttatttcacgagc 30774237  T
Q  238 ttataa 243  Q
    ||||||    
T  30774236 ttataa 30774231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 26699245 - 26699145
Alignment:
Q  143 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    ||||||| |||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26699245 ttagcttatagcttataggttataagctcgtttgacaaataaagctctgtttggtaacactttttcaccatgagcttatagcttatttcatgagcttata 26699146  T
Q  243 a 243  Q
    |    
T  26699145 a 26699145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 26968978 - 26968878
Alignment:
Q  143 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    ||||||| |||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26968978 ttagcttatagcttataggttataagctcgtttgacaaataaagctctgtttggtaacactttttcaccatgagcttatagcttatttcatgagcttata 26968879  T
Q  243 a 243  Q
    |    
T  26968878 a 26968878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 9587331 - 9587225
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    |||||||||||| ||||||||||||||||||||||||||||        | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9587331 agcttttagcttatagcttatagcttataagctcgtttgacaaaaaaaagttctgtttgataacactttttcaccatgagcttatagcttatttcacgag 9587232  T
Q  237 cttataa 243  Q
    |||||||    
T  9587231 cttataa 9587225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 12363757 - 12363651
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    |||||||| ||||||||||||||||||||||||||||||||        | ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12363757 agcttttaacttttagcttatagcttataagctcgtttgacaaaaaaaagttctgtttggtaacactttttcaccatgagcttataacttatttcacgag 12363658  T
Q  237 cttataa 243  Q
    |||||||    
T  12363657 cttataa 12363651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 11664035 - 11663930
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||| ||       |||||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  11664035 agcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccataagtttatagcttatttcacgagc 11663936  T
Q  238 ttataa 243  Q
    ||||||    
T  11663935 ttataa 11663930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 6893522 - 6893418
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||| |||||| ||||||||||| |||||||||||||||||       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6893522 agctgttagctcttagcttatagtttataagctcgtttgacaaaaaa-gctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagc 6893424  T
Q  238 ttataa 243  Q
    ||||||    
T  6893423 ttataa 6893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 5521305 - 5521396
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5521305 agcttatagcttataagctcgtttgacaaaaaaaattctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 5521396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 15530442 - 15530533
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||        || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15530442 agcttatagcttataagctcgtttgacaaaaaaaactatgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 15530533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 31169128 - 31169026
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    ||||||||||||| |||||| ||||||| |||||||||        ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31169128 ttttagcttttagtttatagtttataagttcgtttgacaaaaaaaactctgtttgataacactttttcaccatgagcttatagcttatttcacgagctta 31169029  T
Q  241 taa 243  Q
    |||    
T  31169028 taa 31169026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 35236812 - 35236706
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    ||||||||||| |||||||||||||||||||||||||| |         |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35236812 agcttttagctcttagcttatagcttataagctcgtttcataaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacgag 35236713  T
Q  237 cttataa 243  Q
    |||||||    
T  35236712 cttataa 35236706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 3670271 - 3670376
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||| ||||||||| ||        ||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  3670271 agcttttagctcttagcttatagcttatgagctcgtttcacaaaaaaaactctgtttggtaacactttttgaccatgcgcttatagcttatttcacgagc 3670370  T
Q  238 ttataa 243  Q
    ||||||    
T  3670371 ttataa 3670376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 13157030 - 13156925
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||| ||||||||||||||| | |||||||       |||||||||||||||||||||||||||| | ||||||||||||||||||||     
T  13157030 agcttttagcttttaccttatagcttataagtttgtttgacaaaaaaagctctgtttggtaacactttttcaccattaacttatagcttatttcacgagt 13156931  T
Q  238 ttataa 243  Q
    ||||||    
T  13156930 ttataa 13156925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 648538 - 648629
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||| ||||       ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  648538 agcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaatgctttttcaccatgagcttatagcttatttcacgagcttataa 648629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 5382082 - 5381983
Alignment:
Q  143 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    ||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  5382082 ttagcttatagcttatagcttataagctcgtttgacaaaaaa-gctctgtttggtaacactttttcaccacgagcttataacttatttcatgagcttata 5381984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 36028121 - 36028030
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||| |||||||        |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36028121 agcttatagcttataagcttgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttattttacgagcttataa 36028030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 15443452 - 15443554
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    ||||| ||||||| |||||||||||||| |||||||||       | | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15443452 ttttaacttttagtttatagcttataagttcgtttgacaagtttagttttggttggtaacactttttcaccatgagcttatagcttatttcacgagctta 15443551  T
Q  241 taa 243  Q
    |||    
T  15443552 taa 15443554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 3037569 - 3037464
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||| ||||||||||||||||| ||||||        | | |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  3037569 agcttttagcttttaacttatagcttataagcttgtttgataaaaaaaggtatgtttggtaacacttttttaccatgagtttatagcttatttcacgagc 3037470  T
Q  238 ttataa 243  Q
    ||||||    
T  3037469 ttataa 3037464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 4379300 - 4379356
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4379300 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 4379356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 7651682 - 7651738
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7651682 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 7651738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 11063047 - 11062946
Alignment:
Q  143 ttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttat 241  Q
    ||||||| |||||||||||||||||||||||||| |        ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  11063047 ttagcttatagcttatagcttataagctcgtttggcaaaaaaaagctctgtttggtaacactttttcaccatgagcttataacttatttcatgagcttat 11062948  T
Q  242 aa 243  Q
    ||    
T  11062947 aa 11062946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 2178802 - 2178858
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2178802 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagtttataa 2178858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 35639933 - 35640038
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||| ||||| ||||||  ||||||||||||||||        |||||||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  35639933 agcttttagtttttaacttataatttataagctcgtttgataaaaaaagctctgtttgataatactttttcaccatgagtttatagcttatttcacgagc 35640032  T
Q  238 ttataa 243  Q
    ||||||    
T  35640033 ttataa 35640038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 19347705 - 19347804
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| |||||| ||||||||||||||||||||         |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  19347705 agcttatagcttttagcttataagctcgtttgataaaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttatttcacgagcttataa 19347804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 22977301 - 22977244
Alignment:
Q  186 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  22977301 gctctgtttggtaacaccttttcaccatgagcttatagcttatttcatgagcttataa 22977244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 3669534 - 3669639
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| ||||||||||| ||||||| ||||||||        |||||||||||||||||||||| ||||| | ||| |||||||||||| ||||    
T  3669534 agcttttagctcttagcttatagtttataagttcgtttgataaaaaaagctctgtttggtaacacttttttaccataaacttgtagcttatttcatgagc 3669633  T
Q  238 ttataa 243  Q
    ||||||    
T  3669634 ttataa 3669639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 25872352 - 25872268
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttata 222  Q
    |||||||||||  ||||||||||||||||||||| ||||||       |||||||||||||||||||||||||||||| ||||||    
T  25872352 agcttttagctcgtagcttatagcttataagctcatttgacaaaaaaagctctgtttggtaacactttttcaccatgaacttata 25872268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 11100899 - 11100801
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||||||||||||||||||||| ||||       |||||||||||||||   |||| || | ||||||||||||||||||||||||||||||    
T  11100899 agcttatagcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgtctttttacaacgagcttatagcttatttcacgagcttataa 11100801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 2497570 - 2497661
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||| | ||       ||||| ||||||||  ||||||||||||||| ||||| ||||||||||||||||||||    
T  2497570 agcttatagcttataagctcgtctaacaaaaaatgctctatttggtaatgctttttcaccatgagattataacttatttcacgagcttataa 2497661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 23920498 - 23920555
Alignment:
Q  186 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||  | |||||||| |||||||||| |||||||||||||||||||    
T  23920498 gctctgtttggtaactatctttcaccaggagcttatagtttatttcacgagcttataa 23920555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 9627246 - 9627193
Alignment:
Q  190 tgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||| ||||||||||| || |||||||||||||||||||||  |||||||||    
T  9627246 tgtttgataacacttttttacaatgagcttatagcttatttcagaagcttataa 9627193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 13936233 - 13936290
Alignment:
Q  186 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||  ||||| || | ||||||||||||||||||| ||||||||||    
T  13936233 gctctgtttggtaacggttttttacaacgagcttatagcttatttcatgagcttataa 13936290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 16474771 - 16474869
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||||||||||||||| ||||||||||       ||||||||||||||   | | | |||| |||||||||| |||||||||||| ||||||    
T  16474771 agcttatagcttatagcttataaactcgtttgacaaaaatagctctgtttggtaatggtctcttaccacgagcttatagtttatttcacgagattataa 16474869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 6280550 - 6280494
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||| | || |||||||| ||||||||||||| |||||||||| | ||||||    
T  6280550 ctctgtttgatgacgctttttcatcatgagcttatagtttatttcacgggtttataa 6280494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 28382857 - 28382725
Alignment:
Q  104 ggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacact 203  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||    
T  28382857 ggctctgtttggttaaccccaaaaagtagctt-------ttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacact 28382765  T
Q  204 ttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28382764 ttttcaccatgagcttatagcttatttcacgagcttataa 28382725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 103 - 243
Target Start/End: Complemental strand, 4453701 - 4453568
Alignment:
Q  103 aggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacac 202  Q
    ||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  4453701 aggctctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacac 4453609  T
Q  203 tttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4453608 tttttcaccatgagcttatagcttatttcacgagcttataa 4453568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 15521439 - 15521575
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    |||||||||  ||||| |||||  ||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||||    
T  15521439 tctgtttggaaaacccaaaaaaagagcttttagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaaaactttt 15521538  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  15521539 tcaccatgagcttatagcttatttcacgagcttataa 15521575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 3377383 - 3377488
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3377383 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 3377482  T
Q  238 ttataa 243  Q
    ||||||    
T  3377483 ttataa 3377488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 9886983 - 9887088
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9886983 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 9887082  T
Q  238 ttataa 243  Q
    ||||||    
T  9887083 ttataa 9887088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 16486873 - 16486978
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16486873 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 16486972  T
Q  238 ttataa 243  Q
    ||||||    
T  16486973 ttataa 16486978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 36712686 - 36712581
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36712686 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 36712587  T
Q  238 ttataa 243  Q
    ||||||    
T  36712586 ttataa 36712581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 8689135 - 8689007
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    |||||||||||||||||||||||        |||||||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||||    
T  8689135 tctgtttggttaaccccaaaaag--------agcttttagcttttagtttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttt 8689044  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  8689043 tcaccatgagcttatagcttatttcacgagcttataa 8689007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 243
Target Start/End: Original strand, 18212082 - 18212216
Alignment:
Q  102 taggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaaca 201  Q
    |||| ||||||||||||||||||||||| |||||       |||||||||| |||||||||||||||||||||||||       ||||||||||||||||    
T  18212082 tagggtctgtttggttaaccccaaaaaggagctt-------ttagcttttaccttatagcttataagctcgtttgacaaaaaaagctctgtttggtaaca 18212174  T
Q  202 ctttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18212175 ctttttcaccatgagcttatagcttatttcacgagcttataa 18212216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 38579156 - 38579053
Alignment:
Q  140 cttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctt 239  Q
    |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38579156 cttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctt 38579057  T
Q  240 ataa 243  Q
    ||||    
T  38579056 ataa 38579053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 5039766 - 5039871
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5039766 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccgtgagcttatagcttatttcacgagc 5039865  T
Q  238 ttataa 243  Q
    ||||||    
T  5039866 ttataa 5039871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 36999480 - 36999585
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36999480 agcttttagcttttagtttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 36999579  T
Q  238 ttataa 243  Q
    ||||||    
T  36999580 ttataa 36999585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 41322747 - 41322852
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41322747 agcttttagcttttatcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 41322846  T
Q  238 ttataa 243  Q
    ||||||    
T  41322847 ttataa 41322852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 13111895 - 13111787
Alignment:
Q  136 atagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgttt-ggtaacactttttcaccatgagcttatagcttatttcacg 234  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13111895 atagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgttttggtaacactttttcaccatgagcttatagcttatttcacg 13111796  T
Q  235 agcttataa 243  Q
    |||||||||    
T  13111795 agcttataa 13111787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 21865213 - 21865343
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacacttt 205  Q
    ||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  21865213 tctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaaagctctgtttggtaacacttt 21865305  T
Q  206 ttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21865306 ttcaccatgagcttatagcttatttcacgagcttataa 21865343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 650953 - 650825
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | ||||||||||||| |||||||||||||||||||||||||||       |||||||||||||||||||||    
T  650953 tctgtttggttaaccccaaaaa-------agagcttttagcttt-agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttt 650862  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  650861 tcaccatgagcttatagcttatttcacgagcttataa 650825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 8815208 - 8815309
Alignment:
Q  142 tttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttat 241  Q
    ||||||||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8815208 tttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttat 8815307  T
Q  242 aa 243  Q
    ||    
T  8815308 aa 8815309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 40025092 - 40024987
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||| ||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40025092 agcttttagcttttagcttatagcatataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 40024993  T
Q  238 ttataa 243  Q
    ||||||    
T  40024992 ttataa 40024987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 2266300 - 2266197
Alignment:
Q  140 cttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctt 239  Q
    ||||||||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2266300 cttttagcttttagcttatagtttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctt 2266201  T
Q  240 ataa 243  Q
    ||||    
T  2266200 ataa 2266197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 37356162 - 37356265
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctt 239  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37356162 ttttagcttttagcttatagcttataagctcgtttgaccaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctt 37356261  T
Q  240 ataa 243  Q
    ||||    
T  37356262 ataa 37356265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 24402195 - 24402097
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||| |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24402195 agcttttagcttttagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 24402097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 43507705 - 43507607
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43507705 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttatttcacgagcttataa 43507607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 2546474 - 2546369
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  2546474 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacaaattttaaccatgagcttatagcttatttcacgagc 2546375  T
Q  238 ttataa 243  Q
    ||||||    
T  2546374 ttataa 2546369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 4038490 - 4038385
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||||||||||||||| ||||||||||||        | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4038490 agcttttagcttttagcttatagcttacaagctcgtttgataaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 4038391  T
Q  238 ttataa 243  Q
    ||||||    
T  4038390 ttataa 4038385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 4385675 - 4385570
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4385675 agcttttagctcttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagtttatagcttatttcacgagc 4385576  T
Q  238 ttataa 243  Q
    ||||||    
T  4385575 ttataa 4385570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 146 - 243
Target Start/End: Complemental strand, 31616528 - 31616431
Alignment:
Q  146 gcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31616528 gcttttagcttatagcttataagctcgtttgacaaaaaaagctttgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 31616431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 10393180 - 10393080
Alignment:
Q  143 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    ||||||| ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10393180 ttagcttatagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcatgagcttata 10393081  T
Q  243 a 243  Q
    |    
T  10393080 a 10393080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 10839728 - 10839625
Alignment:
Q  140 cttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctt 239  Q
    |||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  10839728 cttttagcttttagcttatagcttataaactcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatatcttatttcactagctt 10839629  T
Q  240 ataa 243  Q
    ||||    
T  10839628 ataa 10839625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 39167756 - 39167847
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39167756 agcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 39167847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 6760754 - 6760649
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||| ||       |||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  6760754 agcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacaagc 6760655  T
Q  238 ttataa 243  Q
    ||||||    
T  6760654 ttataa 6760649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 43135608 - 43135713
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||||||||||||||||||| ||||||||        |||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  43135608 agcttttagcttttagcttatagcttataagttcgtttgataaaaaaagctctgtttgataacactttttcatcatgagcttatagcttatttcacgagc 43135707  T
Q  238 ttataa 243  Q
    ||||||    
T  43135708 ttataa 43135713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 17263896 - 17263798
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||| |||||||||||||||||||||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  17263896 agcttttagcttttagcttataagctcgtttgacaaaaaaagctctgtttggtaacatgttttcaccatgagcttatagcttatttcacgagcttataa 17263798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 6232430 - 6232325
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6232430 agcttttagctcttagcttataacttataagctcgtttgacaaaaaatattctgtttggtaacactttttcaccatgagcttatagtttatttcacgagc 6232331  T
Q  238 ttataa 243  Q
    ||||||    
T  6232330 ttataa 6232325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 7400529 - 7400436
Alignment:
Q  150 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||| |||||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7400529 ttagtttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 7400436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 26911503 - 26911607
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| ||| |||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26911503 agcttttagctcttaacttatagcttataagctcgtttgacaaaaaaa-ctctctttggtaacactttttcaccatgagcttatagcttatttcacgagc 26911601  T
Q  238 ttataa 243  Q
    ||||||    
T  26911602 ttataa 26911607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 29514832 - 29514929
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||| |||||||||||||||||||||       ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29514832 agcttttagcttttagcttataagctcgtttgacaaaaaa-gctctgtttggtaacactttttcaccaagagcttatagcttatttcacgagcttataa 29514929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 41796892 - 41796787
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| ||||||||||| |||||||||||||| |        ||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  41796892 agcttttagctcttagcttatagtttataagctcgttttataaaaaaagctctgtttcgtaacactttttgaccatgagcttatagcttatttcacgagc 41796793  T
Q  238 ttataa 243  Q
    ||||||    
T  41796792 ttataa 41796787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 40869504 - 40869404
Alignment:
Q  143 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    ||||||| |||||||||| |||||||||| ||||||       | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40869504 ttagcttatagcttatagtttataagctcatttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcatgagcttata 40869405  T
Q  243 a 243  Q
    |    
T  40869404 a 40869404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 13528054 - 13527949
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||| |||||||||||||||||||||||||       |||||||| |||||||| ||||||||||||| ||||| |||||||||| ||     
T  13528054 agcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgttcggtaacaccttttcaccatgagtttataacttatttcacaagt 13527955  T
Q  238 ttataa 243  Q
    ||||||    
T  13527954 ttataa 13527949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 18710181 - 18710265
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttata 222  Q
    ||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||    
T  18710181 agcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccatgagcttata 18710265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 38880933 - 38880827
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    |||||||| || |||||||||||||||||||||||||| ||        | |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38880933 agcttttaactcttagcttatagcttataagctcgtttcacaaaaaaaagttctgtttggtaacactttttgaccatgagcttatagcttatttcacgag 38880834  T
Q  237 cttataa 243  Q
     ||||||    
T  38880833 tttataa 38880827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 44275654 - 44275758
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||| ||         | |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  44275654 agcttttagctcttagcttatagcttataagctcgtttcacaaaaaaat-tatgtttggtaacactttttgaccacgagcttatagcttatttcacgagc 44275752  T
Q  238 ttataa 243  Q
    ||||||    
T  44275753 ttataa 44275758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 8070756 - 8070665
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| |||||||||| ||||||||||        || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8070756 agcttctagcttataaactcgtttgacaaaaaaaactttgtttggtaacactttttcaccatgagcttataacttatttcacgagcttataa 8070665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 43285657 - 43285714
Alignment:
Q  186 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  43285657 gctctgtttggtaacactttttcaccatgagcttatagcttatttcatgagtttataa 43285714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 38842875 - 38842931
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  38842875 ctctgtttggtaatactttttcaccatgagtttatagcttatttcacgagcttataa 38842931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 42132708 - 42132763
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  42132708 tctgtttggtaacaccttttcatcatgagcttatagcttatttcacgagcttataa 42132763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 10727824 - 10727926
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    ||||| ||||||||||||||||||| ||| |||||||        | |||||||| ||||||||||||| ||| ||||||||||||||||||||| ||||    
T  10727824 ttttaacttttagcttatagcttattagcccgtttgataaaaaaagttctgtttgataacactttttcatcataagcttatagcttatttcacgaactta 10727923  T
Q  241 taa 243  Q
    |||    
T  10727924 taa 10727926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 6153598 - 6153509
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttat 228  Q
    ||||||||||| |||||||||||||||||||||||||||||       | | |||||||||| ||||||| ||||||||||||||||||||    
T  6153598 agcttttagctcttagcttatagcttataagctcgtttgac-aaaaaagttttgtttggtaaaacttttttaccatgagcttatagcttat 6153509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 7213762 - 7213706
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||    
T  7213762 ctctgtttgataatactttttgaccatgagcttatagcttatttcacgagcttataa 7213706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 8339970 - 8340067
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacga 235  Q
    ||||||||||| ||| ||||||| ||||||| |||||||||       | |||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  8339970 agcttttagctcttaacttatagtttataagttcgtttgacgaaaaaagttctgtttggtaacactttttcatcatgagcttatagtttattttacga 8340067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 23357128 - 23357030
Alignment:
Q  145 agcttttagcttatag-cttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    ||||| |||||||||| ||||||||||||||||||       ||| ||||||||||  || | | |||| |||||||||||||||||||||||||||||    
T  23357128 agcttatagcttataggcttataagctcgtttgacaaaaaaagctatgtttggtaatgctctcttaccacgagcttatagcttatttcacgagcttata 23357030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 9053226 - 9053175
Alignment:
Q  192 tttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||| |||||||||| || |||| |||||||||||||||||||    
T  9053226 tttggtaacacttattcaccatgaactaatagtttatttcacgagcttataa 9053175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 24019895 - 24019982
Alignment:
Q  156 tatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||       ||| ||||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  24019895 tatagcttataagctcgtttgacaaaaaaagctttgtttggtaatgatctctaaccacgagcttatagcttatttcacgagcttataa 24019982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 7569776 - 7569861
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttata 222  Q
    |||||||| || | ||||||||||||||||||||||||||         | |||||||||||||||||||| ||||||||||||||    
T  7569776 agcttttaactctcagcttatagcttataagctcgtttgataaaaaaaagttctgtttggtaacacttttttaccatgagcttata 7569861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 15250163 - 15250201
Alignment:
Q  205 tttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  15250163 tttcaccacgagcttatagcttatttctcgagcttataa 15250201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 241
Target Start/End: Original strand, 4055951 - 4055984
Alignment:
Q  208 caccatgagcttatagcttatttcacgagcttat 241  Q
    ||||| ||||||||||||||||||||||||||||    
T  4055951 caccacgagcttatagcttatttcacgagcttat 4055984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 13761777 - 13761810
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgac 178  Q
    ||||| ||||||||||||||||||||||||||||    
T  13761777 agcttatagcttatagcttataagctcgtttgac 13761810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 22375955 - 22375987
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttga 177  Q
    ||||| |||||||||||||||||||||||||||    
T  22375955 agcttatagcttatagcttataagctcgtttga 22375987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 93)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 102 - 243
Target Start/End: Complemental strand, 40563550 - 40563416
Alignment:
Q  102 taggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaaca 201  Q
    ||||||||||||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  40563550 taggctctgtttggttatccccaaaaagtagctt-------ttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaaca 40563458  T
Q  202 ctttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40563457 ctttttcaccatgagcttatagcttatttcacgagcttataa 40563416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 29081466 - 29081334
Alignment:
Q  104 ggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacact 203  Q
    |||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||    
T  29081466 ggctctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacact 29081374  T
Q  204 ttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29081373 ttttcaccatgagcttatagcttatttcacgagcttataa 29081334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 26540930 - 26541059
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  26540930 tctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttt 26541022  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  26541023 tcaccatgagcttatagcttatttcacgagcttataa 26541059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 16127297 - 16127192
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16127297 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 16127198  T
Q  238 ttataa 243  Q
    ||||||    
T  16127197 ttataa 16127192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 38185764 - 38185869
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38185764 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 38185863  T
Q  238 ttataa 243  Q
    ||||||    
T  38185864 ttataa 38185869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 44845621 - 44845723
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44845621 ttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 44845720  T
Q  241 taa 243  Q
    |||    
T  44845721 taa 44845723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 45345163 - 45345061
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45345163 ttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 45345064  T
Q  241 taa 243  Q
    |||    
T  45345063 taa 45345061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 25570373 - 25570478
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25570373 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacaagc 25570472  T
Q  238 ttataa 243  Q
    ||||||    
T  25570473 ttataa 25570478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 28677048 - 28676943
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28677048 agcttttagcttttagcttatagcttataagctcgtttgaaaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 28676949  T
Q  238 ttataa 243  Q
    ||||||    
T  28676948 ttataa 28676943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 35499595 - 35499700
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35499595 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaatctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 35499694  T
Q  238 ttataa 243  Q
    ||||||    
T  35499695 ttataa 35499700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 37088278 - 37088383
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37088278 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagc 37088377  T
Q  238 ttataa 243  Q
    ||||||    
T  37088378 ttataa 37088383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 37528881 - 37528776
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37528881 agcttttaacttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 37528782  T
Q  238 ttataa 243  Q
    ||||||    
T  37528781 ttataa 37528776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 46248122 - 46248017
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46248122 agcttttagtttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 46248023  T
Q  238 ttataa 243  Q
    ||||||    
T  46248022 ttataa 46248017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 2580085 - 2579980
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||| |||||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2580085 agcttttagcttttagtttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 2579986  T
Q  238 ttataa 243  Q
    ||||||    
T  2579985 ttataa 2579980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 8872867 - 8872972
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  8872867 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctatgtttggtaatactttttcaccatgagcttatagcttatttcacgagc 8872966  T
Q  238 ttataa 243  Q
    ||||||    
T  8872967 ttataa 8872972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 24536712 - 24536607
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24536712 agcttttagctcttagcttagagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 24536613  T
Q  238 ttataa 243  Q
    ||||||    
T  24536612 ttataa 24536607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 40480179 - 40480074
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40480179 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttattttacgagc 40480080  T
Q  238 ttataa 243  Q
    ||||||    
T  40480079 ttataa 40480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 44545224 - 44545329
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44545224 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgaacttatagcttatttcacgagc 44545323  T
Q  238 ttataa 243  Q
    ||||||    
T  44545324 ttataa 44545329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 44748944 - 44748839
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||| || |||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44748944 agcttttagcttttagcttatagcttataaacttgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 44748845  T
Q  238 ttataa 243  Q
    ||||||    
T  44748844 ttataa 44748839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 243
Target Start/End: Complemental strand, 19948505 - 19948371
Alignment:
Q  102 taggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaaca 201  Q
    |||| ||||||||||||||||||||||       | |||||||||||| |||||||||| |||||||||||||||||       ||||||||||||||||    
T  19948505 tagggtctgtttggttaaccccaaaaa-------agagcttttagcttctagcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaaca 19948413  T
Q  202 ctttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  19948412 cttttttaccatgagcttatagcttatttcacgagcttataa 19948371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 37714116 - 37714018
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37714116 agcttttagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 37714018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 39469914 - 39470012
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39469914 agcttttagcttatagcttataagctcgtttgaccaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacaagcttataa 39470012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 52794896 - 52794994
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  52794896 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttccccatgagcttatagcttatttcacgagcttataa 52794994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 55305260 - 55305162
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55305260 agcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 55305162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 38892144 - 38892039
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38892144 agcttttagcttttagcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttatttcacgagc 38892045  T
Q  238 ttataa 243  Q
     |||||    
T  38892044 ctataa 38892039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 4240279 - 4240377
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4240279 agcttttagcttataacttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 4240377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 242
Target Start/End: Original strand, 41785774 - 41785907
Alignment:
Q  102 taggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaaca 201  Q
    |||| ||||||||||||||||||||||       | ||||||||||||||| |||||||||||||||||||||||||       |||||||||| ||| |    
T  41785774 tagggtctgtttggttaaccccaaaaa-------agagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttgataata 41785866  T
Q  202 ctttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  41785867 ctttttcaccatgagcttatagcttatttcatgagcttata 41785907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 43525744 - 43525842
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||| ||||||       |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43525744 agcttttagcttatagcttataagctcatttgacaaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttatttcacgagcttataa 43525842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 53779032 - 53779130
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||| |||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53779032 agcttttagcttttagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 53779130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 21707145 - 21707250
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||| |||||||||||||||||||||| ||       | ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21707145 agcttttagcttttaacttatagcttataagctcgtttaacaaaaaaagttctgtttggtaacactttttcaccatgagattatagcttatttcacgagc 21707244  T
Q  238 ttataa 243  Q
    ||||||    
T  21707245 ttataa 21707250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 52857890 - 52857995
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||| ||||||||||||||||||||| ||       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  52857890 agcttttagctcttagtttatagcttataagctcgttttacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagc 52857989  T
Q  238 ttataa 243  Q
    ||||||    
T  52857990 ttataa 52857995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 54672337 - 54672233
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||| |||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  54672337 agcttttagcttttagtttatagcttataagctcgtttga-gaaaaaagctctgtttgataacactttttcaccatgagcttatagcttatttcacgagc 54672239  T
Q  238 ttataa 243  Q
    ||||||    
T  54672238 ttataa 54672233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 42217662 - 42217762
Alignment:
Q  143 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    ||||||| |||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42217662 ttagcttatagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttata 42217761  T
Q  243 a 243  Q
    |    
T  42217762 a 42217762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 54542086 - 54541988
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       | | |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  54542086 agcttttagcttatagcttataagctcgtttgacaaaaaaagttttgtttggtaacattttttcaccatgagcttatagcttatttcacgagcttataa 54541988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 24628345 - 24628252
Alignment:
Q  150 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||       |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  24628345 ttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttatttcatgagcttataa 24628252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 29718358 - 29718254
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||| |||||| ||||||||||||||||||||||||       ||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  29718358 agcttttagtttttagtttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttt-catcatgagcttatagcttatttcacgagc 29718260  T
Q  238 ttataa 243  Q
    ||||||    
T  29718259 ttataa 29718254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 47897764 - 47897659
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| ||||||| ||||||||||||| ||| ||||||       ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47897764 agcttttaccttttagtttatagcttataaactcatttgacaaaaaaagctctgtttagtaacactttttcaccatgagcttatagcttatttcacgagc 47897665  T
Q  238 ttataa 243  Q
    ||||||    
T  47897664 ttataa 47897659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 49853201 - 49853096
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| || ||| |||||||||||||||||||||||||       ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  49853201 agcttttaactcttaccttatagcttataagctcgtttgacaaaaaaggctatctttggtaacactttttcaccatgagcttatagcttatttcacgagc 49853102  T
Q  238 ttataa 243  Q
    ||||||    
T  49853101 ttataa 49853096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 52166248 - 52166143
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||| ||        |||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  52166248 agcttttagctcttagcttatagcttataagctcgtttcacaaaaaaatctctgtttggcaacactttttgaccatgagcttatagcttatttcacgagc 52166149  T
Q  238 ttataa 243  Q
    ||||||    
T  52166148 ttataa 52166143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 48942992 - 48943088
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||         |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  48942992 agcttttagcttatagcttataagctcgtttgacaaaaaaa--tctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataa 48943088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 46318918 - 46318812
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    |||||||| || ||||||||||||||||||||||||||||         |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46318918 agcttttatctcttagcttatagcttataagctcgtttgataaaaaaaagctctgtttgataacactttttcaccatgagcttatagcttatttcacgag 46318819  T
Q  237 cttataa 243  Q
    |||||||    
T  46318818 cttataa 46318812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 50317180 - 50317082
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||| ||||||||||||||||||||||||        | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  50317180 agcttttaacttatagcttataagctcgtttgataaaaaaagttctgtttggcaacactttttcaccatgagcttatagcttatttcacgagcttataa 50317082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 46972027 - 46972132
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||| ||         | |||||||||||||||||| |||||||||||||||||||||||||||||    
T  46972027 agcttttagctcttagcttatagcttataagctcgtttcacaaaaaaatttatgtttggtaacactttttgaccatgagcttatagcttatttcacgagc 46972126  T
Q  238 ttataa 243  Q
    ||||||    
T  46972127 ttataa 46972132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 50499756 - 50499861
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||||||||||| ||||||||||||||||        | | |||||||||||||||||||||||| ||||||||| |||||||||||||    
T  50499756 agcttttagcttttagcttatagtttataagctcgtttgataaaaaaagttttgtttggtaacactttttcaccataagcttatagtttatttcacgagc 50499855  T
Q  238 ttataa 243  Q
    ||||||    
T  50499856 ttataa 50499861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 30814403 - 30814303
Alignment:
Q  143 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    ||||||| ||||||||||||| ||||||||||||||       | | ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30814403 ttagcttatagcttatagcttttaagctcgtttgacaaaaaaagttttgtttggtaacactttttcaccatgagcttatagcttatttcacgagtttata 30814304  T
Q  243 a 243  Q
    |    
T  30814303 a 30814303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 39876622 - 39876713
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||| |||||||||       |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  39876622 agcttatagcttataagttcgtttgactaaaaaagctctgtttgataacactttttcatcatgagcttatagcttatttcacgagcttataa 39876713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 41246257 - 41246348
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||| ||||||||||       | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41246257 agcttatagcttataaactcgtttgacaaaaaaagttctatttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 41246348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 52225286 - 52225384
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||| ||||||||||||||||||||||       | |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  52225286 agcttatagctcatagcttataagctcgtttgacaacaaaagttctgtttggtaacacttttttaccatgagcttatagcttatttcacgagtttataa 52225384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 30864421 - 30864525
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| ||||||| |||||||||||||||| |||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30864421 agcttttaacttttagtttatagcttataagct-gtttgacaaaaaaaattctgtttggtaacactttttcaccattagcttatagcttatttcacgagc 30864519  T
Q  238 ttataa 243  Q
    ||||||    
T  30864520 ttataa 30864525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 47173562 - 47173667
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||| ||||| ||||||||||| ||||||||||||||||        | |||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  47173562 agcttatagctcttagcttataggttataagctcgtttgataaaaaaagttctgtttgataacgctttttcaccatgagcttatagcttatttcacgagc 47173661  T
Q  238 ttataa 243  Q
    ||||||    
T  47173662 ttataa 47173667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 2121869 - 2121926
Alignment:
Q  186 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2121869 gctctgtttgataacactttttcaccatgagcttatagcttatttcacgagcttataa 2121926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 33391900 - 33392002
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    |||||||| ||| |||| |||||||||| |||||||||       | |||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  33391900 ttttagctcttaacttagagcttataagttcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagtttatttcatgagctta 33391999  T
Q  241 taa 243  Q
    |||    
T  33392000 taa 33392002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 46627644 - 46627550
Alignment:
Q  150 ttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||        | |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  46627644 ttagcttatagcttataagctcgtttgacaaaaaaaagttctgtttggtaatactttttcaccatgagcttatagcttatttcacgaggttataa 46627550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 2851831 - 2851916
Alignment:
Q  158 tagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||| |||||||||       | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2851831 tagcttataagttcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcatgagcttataa 2851916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 12063886 - 12063781
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||| ||||||||||||| || |||||||         |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  12063886 agcttttagctcttagtttatagcttataaacttgtttgacaaaaaaaattctgtttggtaacactttttgaccataagcttatagcttatttcacgagc 12063787  T
Q  238 ttataa 243  Q
    ||||||    
T  12063786 ttataa 12063781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 21603846 - 21603897
Alignment:
Q  192 tttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21603846 tttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 21603897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 51709055 - 51709110
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  51709055 tctgtttggtaacactttttcaccatgagcttataacttatttcacgagcttataa 51709110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 193398 - 193496
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||||||||||||||||||||||||||       |||||||||||||||| ||||| || | ||||||||||||||||| | ||||||||||    
T  193398 agcttatagcttatagcttataagctcgtttgacaaaaatagctctgtttggtaacaattttttacaacgagcttatagcttattttatgagcttataa 193496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 35100181 - 35100282
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn--gctctgtttggtaacactttttcaccatgagcttatagcttatttcacga 235  Q
    ||||||||| | ||||||||||||||||||||||||||||          | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  35100181 agcttttagttcttagcttatagcttataagctcgtttgataaaaaaaaagttttgtttggtaacactttttcaccatgagcttatagcttatttcacga 35100280  T
Q  236 gc 237  Q
    ||    
T  35100281 gc 35100282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 48378220 - 48378325
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| || |||||||||||||||||||||| ||||||         |||||||||||||| |||||||||| |||  |||||||||||||||||||    
T  48378220 agcttttacctcttagcttatagcttataagctcatttgacaaaaaaaaatctgtttggtaacattttttcaccacgagtctatagcttatttcacgagc 48378319  T
Q  238 ttataa 243  Q
    ||||||    
T  48378320 ttataa 48378325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 45693552 - 45693460
Alignment:
Q  150 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    ||||||||||||||||||| |||||||||        || | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  45693552 ttagcttatagcttataagttcgtttgacaaaaaaaactttatttggtaacactttttcaccatgagcttatagtttatttcacgaacttata 45693460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 30548790 - 30548843
Alignment:
Q  190 tgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  30548790 tgtttggtaacacttttttaccatgagcttatagcttatttcacgagtttataa 30548843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 43740384 - 43740331
Alignment:
Q  190 tgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  43740384 tgtttggtaacagtttttcaccatgagtttatagcttatttcacgagcttataa 43740331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 44947352 - 44947254
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| |||||||||||||||||||||||||||        |||||||||||||     ||||||||| ||||||||||||||||||||||||||||||    
T  44947352 agcttatagcttatagcttataagctcgtttgataaaaaaagctctgtttggtactgtcttttcaccacgagcttatagcttatttcacgagcttataa 44947254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 45368604 - 45368709
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||| |||||| ||||| ||||||||||||||||| ||||       ||||||||||||||| |||||| || |  |||||||||||||||||| ||||    
T  45368604 agcttatagcttatagctgatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgcttttttacaacaagcttatagcttatttcaggagc 45368703  T
Q  238 ttataa 243  Q
    ||||||    
T  45368704 ttataa 45368709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 37490083 - 37489977
Alignment:
Q  137 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    |||||| |||||| ||||| |||||||||||||| |||||||       ||||| |||| |||   |||| ||||| |||||||||||||||||||||||    
T  37490083 tagcttatagcttatagctgatagcttataagcttgtttgacaaaaaaagctctatttgttaaagattttccaccacgagcttatagcttatttcacgag 37489984  T
Q  237 cttataa 243  Q
    |||||||    
T  37489983 cttataa 37489977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 52931241 - 52931200
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttat 228  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  52931241 ctctgtttggtaacactttttcaccatgagcttatagcttat 52931200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 42465185 - 42465080
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||| ||||| ||| |||||||||||||||||||||||||         | |||||||||||| ||||||  ||||||||||||||||||||||| ||     
T  42465185 agcttatagctcttaacttatagcttataagctcgtttgacaaaaaaaattatgtttggtaacattttttcggcatgagcttatagcttatttcacaagt 42465086  T
Q  238 ttataa 243  Q
    ||||||    
T  42465085 ttataa 42465080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 51950362 - 51950427
Alignment:
Q  150 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatga 215  Q
    |||||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||    
T  51950362 ttagcttataacttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatga 51950427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 39719361 - 39719452
Alignment:
Q  151 tagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||       |||||||||| ||||  ||||| || |  |||||||||||||||||||||||||||||    
T  39719361 tagcttatagcttataagctcgtttgacaaaaaaagctctgtttgataacgtttttt-acaacaagcttatagcttatttcacgagcttataa 39719452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 42497047 - 42497093
Alignment:
Q  197 taacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  42497047 taacactttttcatcatgagcttataacttatttcacgagcttataa 42497093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 20450452 - 20450557
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||| |||||| ||||  ||||||||||||||||| ||||       |||||||||||||||| ||||| || |  || ||||| ||||||||||||||    
T  20450452 agcttatagcttatagcggatagcttataagctcgtctgacaaaaaaagctctgtttggtaacagttttttacaacaagtttataacttatttcacgagc 20450551  T
Q  238 ttataa 243  Q
    ||||||    
T  20450552 ttataa 20450557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 24536847 - 24536807
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgac 178  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  24536847 agcttttagctcttagcttatagcttataagctcgtttgac 24536807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 27446437 - 27446525
Alignment:
Q  154 cttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagc-ttatagcttatttcacgagcttata 242  Q
    ||||||||||||||||||||| |||       | | |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  27446437 cttatagcttataagctcgttcgacaaaaaaagttatgtttggtaacactttttca-catgagctttatagcttatttcacgagtttata 27446525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 32026555 - 32026462
Alignment:
Q  150 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||| ||||| |||       |||||||||| |||   |||||||||| |||||||||| ||||||||| |||||||||    
T  32026555 ttagcttatagcttataagttcgttcgacaaaaaaagctctgtttgataatggtttttcaccacgagcttatagtttatttcacaagcttataa 32026462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 41518355 - 41518460
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||| ||| || ||||| ||||||||||||||||| |||        ||| | ||||||||| |||||| || ||||||||||||||||||||| ||||    
T  41518355 agcttatagtttatagctgatagcttataagctcgtctgataaaaaaagctttctttggtaacgcttttttacaatgagcttatagcttatttcaagagc 41518454  T
Q  238 ttataa 243  Q
    ||||||    
T  41518455 ttataa 41518460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 52363036 - 52363076
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgac 178  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  52363036 agcttttagcttttagcttatagcttataagcttgtttgac 52363076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 889676 - 889734
Alignment:
Q  100 cataggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttata 159  Q
    |||||| |||||||||||||||| |||||| ||||| ||||||||||||| |||||||||    
T  889676 catagggtctgtttggttaaccctaaaaag-agcttttagcttttagcttatagcttata 889734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 7041105 - 7041160
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||| |||||| || | ||||||||||||||||||| ||||||||||    
T  7041105 tctgtttggtaacgcttttttacaacgagcttatagcttatttcaggagcttataa 7041160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 33898030 - 33897946
Alignment:
Q  159 agcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||        ||||||||||||||    ||||||||| |||||||||||||||||||| |||||||||    
T  33898030 agcttataagctcgtttgataaaaaaagctctgtttggtaatgtcttttcaccacgagcttatagcttatttcacaagcttataa 33897946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 51003307 - 51003346
Alignment:
Q  204 ttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  51003307 ttttcaccacgagcttatagcttatttcacgagcttataa 51003346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 52788677 - 52788733
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaaca 201  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  52788677 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaaca 52788733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 52868266 - 52868232
Alignment:
Q  209 accatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||    
T  52868266 accatgagcttatagcttatttcacgagcttataa 52868232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 52595485 - 52595387
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| || |||||||||||||||||||| ||||       | | ||||||||||   |||||||||||||| |||||||||||||||| || ||||||    
T  52595485 agcttataacttatagcttataagctcgtctgacaaaaaaagttatgtttggtaatgttttttcaccatgagtttatagcttatttcacaagattataa 52595387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 28394212 - 28394172
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgac 178  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  28394212 agcttttagcttttaccttataacttataagctcgtttgac 28394172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 29203136 - 29203080
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||  ||||| || | |||||||||| |||||||||||||||||||    
T  29203136 ctctgtttggtaacggttttttacaacgagcttatagtttatttcacgagcttataa 29203080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 221
Target Start/End: Complemental strand, 32983011 - 32982980
Alignment:
Q  190 tgtttggtaacactttttcaccatgagcttat 221  Q
    ||||||||||||||||||||||||||||||||    
T  32983011 tgtttggtaacactttttcaccatgagcttat 32982980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 168
Target Start/End: Original strand, 889706 - 889736
Alignment:
Q  138 agcttttagcttttagcttatagcttataag 168  Q
    |||||||||||||||||||||||||||||||    
T  889706 agcttttagcttttagcttatagcttataag 889736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 5505852 - 5505907
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaac 200  Q
    ||||| ||||||||||||||||||||||||||||       |||||||||||||||    
T  5505852 agcttatagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaac 5505907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 2187347 - 2187314
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgac 178  Q
    ||||||||||||||||| ||||||||||||||||    
T  2187347 agcttttagcttatagcctataagctcgtttgac 2187314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 2598608 - 2598694
Alignment:
Q  157 atagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||         |||||||||||||   ||||||||||  | ||||||||||||||||| |||||||||    
T  2598608 atagcttataagctcgtttgatcaaaaaaactctgtttggtaatgttttttcaccacaaacttatagcttatttcacaagcttataa 2598694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 31558349 - 31558316
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgac 178  Q
    |||||| |||||||||||||||||||||||||||    
T  31558349 agctttgagcttatagcttataagctcgtttgac 31558316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 24350358 - 24350318
Alignment:
Q  203 tttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||| |||||||||| |||||||||||| ||||||    
T  24350358 tttttcaccacgagcttatagtttatttcacgagtttataa 24350318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 5e-43; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 104 - 243
Target Start/End: Original strand, 45906102 - 45906234
Alignment:
Q  104 ggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacact 203  Q
    ||||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||       ||||||||||||||||||    
T  45906102 ggctctgtttggttaaccccaaaaagtagctt-------ttaccttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacact 45906194  T
Q  204 ttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45906195 ttttcaccatgagcttatagcttatttcacgagcttataa 45906234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 53407156 - 53407284
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  53407156 tctgtttggttaaccccaaaaag--------agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttt 53407247  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  53407248 tcaccatgagcttatagcttatttcacgagcttataa 53407284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 35777564 - 35777435
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  35777564 tctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttt 35777472  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  35777471 tcaccatgagcttatagcttatttcacgagcttataa 35777435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 42116886 - 42116991
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42116886 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 42116985  T
Q  238 ttataa 243  Q
    ||||||    
T  42116986 ttataa 42116991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 47417629 - 47417524
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47417629 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 47417530  T
Q  238 ttataa 243  Q
    ||||||    
T  47417529 ttataa 47417524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 55496034 - 55495929
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55496034 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 55495935  T
Q  238 ttataa 243  Q
    ||||||    
T  55495934 ttataa 55495929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 56372425 - 56372530
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56372425 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 56372524  T
Q  238 ttataa 243  Q
    ||||||    
T  56372525 ttataa 56372530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 12234145 - 12234016
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | ||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||    
T  12234145 tctgtttggttaaccccaaaaa-------agagcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttt 12234053  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  12234052 tcaccatgagcttatagcttatttcacgagcttataa 12234016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 7706362 - 7706467
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7706362 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagtttatagcttatttcacgagc 7706461  T
Q  238 ttataa 243  Q
    ||||||    
T  7706462 ttataa 7706467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 8829969 - 8829864
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8829969 agcttttagtttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 8829870  T
Q  238 ttataa 243  Q
    ||||||    
T  8829869 ttataa 8829864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 18582834 - 18582939
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18582834 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttataacttatttcacgagc 18582933  T
Q  238 ttataa 243  Q
    ||||||    
T  18582934 ttataa 18582939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 19514036 - 19513931
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||||||||||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19514036 agcttttagcttttagcttatagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 19513937  T
Q  238 ttataa 243  Q
    ||||||    
T  19513936 ttataa 19513931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 46895273 - 46895378
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46895273 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagc 46895372  T
Q  238 ttataa 243  Q
    ||||||    
T  46895373 ttataa 46895378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 22038511 - 22038407
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22038511 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttctcgagc 22038412  T
Q  238 ttata 242  Q
    |||||    
T  22038411 ttata 22038407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 131 - 243
Target Start/End: Original strand, 52669977 - 52670089
Alignment:
Q  131 agcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttattt 230  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  52669977 agcttttagcttttagcttttagcttatagcttataagcttgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttattt 52670076  T
Q  231 cacgagcttataa 243  Q
    |||||||||||||    
T  52670077 cacgagcttataa 52670089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 11152086 - 11151988
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11152086 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 11151988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 11600649 - 11600778
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||||    
T  11600649 tctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctatgtttggtaacactttt 11600741  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||| |||||||||    
T  11600742 tcaccatgagcttatagcttatttcacaagcttataa 11600778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 27397913 - 27397815
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27397913 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 27397815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 4392879 - 4392774
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4392879 agcttttagtttttagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 4392780  T
Q  238 ttataa 243  Q
    ||||||    
T  4392779 ttataa 4392774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 4517345 - 4517240
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||| |||||||||||||||||||||||||       ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4517345 agcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacaccttttcaccatgagcttatagcttatttcacgagc 4517246  T
Q  238 ttataa 243  Q
    ||||||    
T  4517245 ttataa 4517240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 28307245 - 28307350
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  28307245 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctcggtttgataacactttttcaccatgagcttatagcttatttcacgagc 28307344  T
Q  238 ttataa 243  Q
    ||||||    
T  28307345 ttataa 28307350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 39087712 - 39087607
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||| ||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  39087712 agcttttagcttctagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagt 39087613  T
Q  238 ttataa 243  Q
    ||||||    
T  39087612 ttataa 39087607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 148 - 243
Target Start/End: Original strand, 31678969 - 31679064
Alignment:
Q  148 ttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31678969 ttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 31679064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 23868016 - 23867918
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||| ||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23868016 agcttttagcttatagcttataagctcttttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 23867918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 29663926 - 29664024
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29663926 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacaagcttataa 29664024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 37115434 - 37115332
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    ||||||||||||||||||||| ||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37115434 ttttagcttttagcttatagcatataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 37115335  T
Q  241 taa 243  Q
    |||    
T  37115334 taa 37115332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 8941894 - 8941999
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| |||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8941894 agcttttaacttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttattttacgagc 8941993  T
Q  238 ttataa 243  Q
    ||||||    
T  8941994 ttataa 8941999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 22892518 - 22892623
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||| ||       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22892518 agcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagc 22892617  T
Q  238 ttataa 243  Q
    ||||||    
T  22892618 ttataa 22892623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 22944182 - 22944287
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||| ||       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22944182 agcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagc 22944281  T
Q  238 ttataa 243  Q
    ||||||    
T  22944282 ttataa 22944287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 33005275 - 33005178
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33005275 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttata 33005178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 29413528 - 29413626
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29413528 agcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgaacttatagcttatttcacgagcttataa 29413626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 53273108 - 53273213
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       | ||| |||||||||||||||||||||||| |||||| ||||||||||||||    
T  53273108 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctatttggtaacactttttcaccatgaacttataacttatttcacgagc 53273207  T
Q  238 ttataa 243  Q
    ||||||    
T  53273208 ttataa 53273213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 55828994 - 55829099
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||| ||       |||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  55828994 agcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttataacttatttcacgagc 55829093  T
Q  238 ttataa 243  Q
    ||||||    
T  55829094 ttataa 55829099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 9043765 - 9043659
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttc-accatgagcttatagcttatttcacgag 236  Q
    |||||||||||||||||||||||||||||||||||||||||       | | ||||||||||||||||||| |||||||||||||| |||||||||||||    
T  9043765 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttatgtttggtaacactttttccaccatgagcttataacttatttcacgag 9043666  T
Q  237 cttataa 243  Q
    |||||||    
T  9043665 cttataa 9043659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 25440631 - 25440533
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||| ||||||||||||||||||||        | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25440631 agcttttagcttttagcttataagctcgtttgataaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 25440533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 35468012 - 35468110
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||| |||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35468012 agcttttaacttatagcttataagctcgtttgacaaaaaaaaatctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 35468110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 43225832 - 43225726
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    ||||||||| ||||||||||||||||||||| | |||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43225832 agcttttagtttttagcttatagcttataagtttgtttgacaaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 43225733  T
Q  237 cttataa 243  Q
    |||||||    
T  43225732 cttataa 43225726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 35581099 - 35580994
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| |||||||||||||||||||||| |||||| ||       |||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  35581099 agcttttaacttttagcttatagcttataagttcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagtttatttcacgagc 35581000  T
Q  238 ttataa 243  Q
    ||||||    
T  35580999 ttataa 35580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 35822453 - 35822348
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||| ||||||||||||||||||        |||||||||||||||||||||||||||||||||| | |||||||||||||     
T  35822453 agcttttagcttttagcttataacttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttacaacttatttcacgaga 35822354  T
Q  238 ttataa 243  Q
    ||||||    
T  35822353 ttataa 35822348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 55764550 - 55764654
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||| |        |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  55764550 agcttttagctcttagcttatagcttataagctcgtttca-aaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagc 55764648  T
Q  238 ttataa 243  Q
    ||||||    
T  55764649 ttataa 55764654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 3009708 - 3009806
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||| ||||||||||       |||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  3009708 agcttttagcttatagcttataaactcgtttgacaaaaaaagctctgtttggtaacatttttttaccttgagcttatagcttatttcacgagcttataa 3009806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 4355739 - 4355641
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||  |||||||||       | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4355739 agcttttagcttatagcttataaattcgtttgacaaaaaaagttctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataa 4355641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 4939532 - 4939435
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||| |||||||||||||||||       | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4939532 agcttttagcttatagtttataagctcgtttgacaaaaaaagttctgtttggtaacacttttt-accatgagcttatagcttatttcacgagcttataa 4939435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 21369890 - 21369975
Alignment:
Q  158 tagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21369890 tagcttataagctcgtttgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataa 21369975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 29656843 - 29656742
Alignment:
Q  142 tttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttat 241  Q
    ||||||| |||||||||||||||||||||||||||||       | |||||||| |||||||||||| ||||||||||||||||||||||||||||| ||    
T  29656843 tttagctcttagcttatagcttataagctcgtttgacagaaaaagttctgtttgttaacactttttcgccatgagcttatagcttatttcacgagctaat 29656744  T
Q  242 aa 243  Q
    ||    
T  29656743 aa 29656742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 37831924 - 37832017
Alignment:
Q  150 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  37831924 ttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacacttttttaccatgagtttatagcttatttcacgagcttataa 37832017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 55856678 - 55856576
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| |||||||||||||||||||||| | ||||||        |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  55856678 agcttttaacttttagcttatagcttataagtttgtttga---taaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagc 55856582  T
Q  238 ttataa 243  Q
    ||||||    
T  55856581 ttataa 55856576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 25199450 - 25199366
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttata 222  Q
    ||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||||    
T  25199450 agcttttagcttttagcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttata 25199366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 45780891 - 45780807
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttata 222  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||||    
T  45780891 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctatttggtaacactttttcaccatgagcttata 45780807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 29656692 - 29656597
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcac 233  Q
    ||||||||||| ||| |||||||||| ||||||||||||||       ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29656692 agcttttagctcttaccttatagcttttaagctcgtttgacaagaaaagctctgtttggtaacactttttcaccacgagcttatagcttatttcac 29656597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 33114979 - 33115070
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| |||||||||||||||||||||       |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  33114979 agcttttagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccgtgagcttatagcttatttcacgagcttataa 33115070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 36008152 - 36008069
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttat 228  Q
    ||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  36008152 agcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttat 36008069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 9032101 - 9032044
Alignment:
Q  186 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9032101 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 9032044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 37970285 - 37970389
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| ||||||||||||||||||| |||||| ||        ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  37970285 agcttttagctcttagcttatagcttataagttcgtttcacaaaaaaa-ctctgtttggtaacactttttgaccatgagcttatagcttatttcatgagc 37970383  T
Q  238 ttataa 243  Q
    ||||||    
T  37970384 ttataa 37970389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 56270231 - 56270140
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||| ||        ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  56270231 agcttatagcttataagctcgtttcacaaaaaaaactctgtttggtaacattttttgaccatgagcttatagcttatttcacgagcttataa 56270140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 15635932 - 15636037
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| || |||||||||||||||||| || ||||||        ||| ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  15635932 agcttttacctcttagcttatagcttataaacttgtttgataaaaaaagctttgtttggtaacactttttcactatgagtttatagcttatttcacgagc 15636031  T
Q  238 ttataa 243  Q
    ||||||    
T  15636032 ttataa 15636037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 23162641 - 23162696
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23162641 tctgtttggtaacactttttccccatgagcttatagcttatttcacgagcttataa 23162696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 26826525 - 26826616
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||| | |||||||        |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  26826525 agcttatagcttataagtttgtttgacaaaaaaaactctgtttggtaacactttttcacgatgagcttataacttatttcacgagcttataa 26826616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 5465516 - 5465459
Alignment:
Q  186 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  5465516 gctctgtttggtaatacttttttaccatgagcttatagcttatttcacgagcttataa 5465459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 240
Target Start/End: Original strand, 44442072 - 44442174
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| |||||||||||||  ||||||| |||||||||         |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  44442072 agcttttaacttttagcttataatttataagttcgtttgacaaaaaaaattctgtttggtaacactttttcaccatgagcttattgcttatctcacgagc 44442171  T
Q  238 tta 240  Q
    |||    
T  44442172 tta 44442174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 55358443 - 55358387
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  55358443 ctctgtttgataacactttttcaccatgagcttataacttatttcacgagcttataa 55358387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 11050320 - 11050412
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||| ||||        ||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||    
T  11050320 agcttatagcttataagctcgtctgacaaaaaaaagctctgtttggtaatgctttttcaccatgaacttatagcttatttcacgagcttataa 11050412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 30366250 - 30366195
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  30366250 tctgtttggtaacactttttcatcatgagcttatatcttatttcacgagcttataa 30366195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 4391855 - 4391757
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||| ||||||||||||||||| ||||       ||||||||||||||| |||||| || | ||||||||||||||||||| ||||||||||    
T  4391855 agcttatagctgatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgcttttttacaacgagcttatagcttatttcaggagcttataa 4391757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 51011220 - 51011114
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    |||||||||||| ||||||||| |||||||||||||||||         | ||| ||||| |||||||||||||||| ||||||||||||||||||| ||    
T  51011220 agcttttagcttctagcttataacttataagctcgtttgataaaaaaaagttctatttggcaacactttttcaccataagcttatagcttatttcacaag 51011121  T
Q  237 cttataa 243  Q
    |||||||    
T  51011120 cttataa 51011114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 23113618 - 23113525
Alignment:
Q  150 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||| ||||||||||||||||         || || ||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  23113618 ttagcttatagtttataagctcgtttgataaaaaaaactttgattggtaatactttttcgccatgagcttatagcttatttcacgagcttataa 23113525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 35842696 - 35842644
Alignment:
Q  191 gtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  35842696 gtttggtaacactttttcaccatgagcttatagattatttcgcgagcttataa 35842644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 31338656 - 31338549
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacacttttt--caccatgagcttatagcttatttcacga 235  Q
    ||||| ||||| ||| || |||||||||||| |||||||||       ||||||||| |||||| |||||  |||||||||||||||||||||||||||     
T  31338656 agcttatagctcttaactgatagcttataagttcgtttgacaaaaaaagctctgtttagtaacattttttttcaccatgagcttatagcttatttcacgg 31338557  T
Q  236 gcttataa 243  Q
    ||||||||    
T  31338556 gcttataa 31338549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 52708138 - 52708047
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||         ||||||||||||||  ||||| || | ||||||||||||||||||||||||||||||    
T  52708138 agcttatagcttataagctcgtttgatagaaaaaactctgtttggtaacgattttttacaacgagcttatagcttatttcacgagcttataa 52708047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 22430637 - 22430730
Alignment:
Q  150 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||| ||        ||||| |||| |||   |||||||||| ||||||||||||||||||||||||||||||    
T  22430637 ttagcttatagcttataagctcgttcgataaaaaaagctctatttgataatggtttttcaccacgagcttatagcttatttcacgagcttataa 22430730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 25235135 - 25235240
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||| ||| || ||||| |||||||||||| |||| ||||       ||||||||||||||| |||||| || | ||||||||||||||||||| ||||    
T  25235135 agcttatagtttatagctgatagcttataagttcgtctgacaaaaaaagctctgtttggtaacgcttttttacaacgagcttatagcttatttcaggagc 25235234  T
Q  238 ttataa 243  Q
    ||||||    
T  25235235 ttataa 25235240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 27185737 - 27185681
Alignment:
Q  189 ctgtttggt-aacactttttc-accatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  27185737 ctgtttggttaacactttttctaccatgagcttatagcttatttcacgagcttataa 27185681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 17715579 - 17715658
Alignment:
Q  143 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttata 222  Q
    ||||||| ||||||||||||||||||||||||||||       ||||||||||||||   |||||||||| |||||||||    
T  17715579 ttagcttatagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaatggtttttcaccacgagcttata 17715658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 35190763 - 35190665
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||||||||||||||||||||| ||||        |||||||||||||| |||||| || | ||| || |||||||||||| ||||||||||    
T  35190763 agcttatagcttatagcttataagctcgtctgacaaaaaaaactctgtttggtaacgcttttttacaacgagtttgtagcttatttcaggagcttataa 35190665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 36196864 - 36196969
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||| ||| || |||||||||| |||||||||||||||||       |||||||||| |||   | | | |||| ||||||||||||||||||||||||    
T  36196864 agcttatagtttatagcttatagtttataagctcgtttgacaaaaatagctctgtttgataattgtctcttaccacgagcttatagcttatttcacgagc 36196963  T
Q  238 ttataa 243  Q
    ||||||    
T  36196964 ttataa 36196969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 20511413 - 20511504
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||| |||| ||||        ||||||||| ||||| ||||| || | ||||||||||||||||||| ||||||||||    
T  20511413 agcttatagcttataagttcgtctgaccaaaaacactctgtttgataacagttttttacaacgagcttatagcttatttcatgagcttataa 20511504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 21633964 - 21633865
Alignment:
Q  144 tagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||| |||||||||||||||||| |||||||||       | | ||||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  21633964 tagcttatagcttatagcttataagttcgtttgacaaaaaaagttttgtttggtaatgttctcttaccacgagcttatagcttatttcacgagcttataa 21633865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 4465573 - 4465520
Alignment:
Q  190 tgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||   |||| || ||||||||||||||||||||||||||||||||    
T  4465573 tgtttggtaacgtctttttacaatgagcttatagcttatttcacgagcttataa 4465520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 20148884 - 20148851
Alignment:
Q  210 ccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||    
T  20148884 ccatgagcttatagcttatttcacgagcttataa 20148851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 42085812 - 42085771
Alignment:
Q  202 ctttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  42085812 ctttttcaccacgaacttatagcttatttcacgagcttataa 42085771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 55684692 - 55684790
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||| ||||||||||||||||| ||||       ||| ||||||||||  |||||| || | |||||| |||||||||||| ||||||||||    
T  55684692 agcttatagctgatagcttataagctcgtctgacaaaaaaagctttgtttggtaatgcttttttacaacgagcttctagcttatttcaggagcttataa 55684790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 44525659 - 44525699
Alignment:
Q  193 ttggtaacactttttcaccatgagcttatagcttatttcac 233  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  44525659 ttggtaacactttttcactatgagtttatagcttatttcac 44525699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 19169204 - 19169165
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttga 177  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  19169204 agcttttagctcttaacttatagcttataagctcgtttga 19169165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 36486489 - 36486434
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||| |||||||||||||||  |||||| |||||| | ||||||||||    
T  36486489 tctgtttggtaatactttttcaccatgaatttatagtttattttatgagcttataa 36486434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 43078300 - 43078245
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||   |||||| ||| ||||||||| ||||||||||||||||||||    
T  43078300 tctgtttggtaatgttttttcgccacgagcttataacttatttcacgagcttataa 43078245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 44525694 - 44525732
Alignment:
Q  205 tttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  44525694 tttcactatgagtttatagcttatttcacgagcttataa 44525732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 45520101 - 45520135
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgttt 175  Q
    |||||||| ||||||||||||||||||||||||||    
T  45520101 ttttagctcttagcttatagcttataagctcgttt 45520135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 36246570 - 36246432
Alignment:
Q  97 atacataggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttgg 196  Q
    |||| ||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||       |||||||||||    
T  36246570 atacttaggctctgtttggttaaccc-aaaaagtagctt-------ttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttgg 36246479  T
Q  197 taacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36246478 taacactttttcaccatgagcttatagcttatttcacgagcttataa 36246432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 10312190 - 10312085
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10312190 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 10312091  T
Q  238 ttataa 243  Q
    ||||||    
T  10312090 ttataa 10312085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 42587544 - 42587439
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42587544 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 42587445  T
Q  238 ttataa 243  Q
    ||||||    
T  42587444 ttataa 42587439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 43254097 - 43254202
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43254097 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 43254196  T
Q  238 ttataa 243  Q
    ||||||    
T  43254197 ttataa 43254202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 45687077 - 45686972
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45687077 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 45686978  T
Q  238 ttataa 243  Q
    ||||||    
T  45686977 ttataa 45686972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 32168827 - 32168932
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32168827 agcttttagctcttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 32168926  T
Q  238 ttataa 243  Q
    ||||||    
T  32168927 ttataa 32168932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 27089810 - 27089712
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27089810 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 27089712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 27188491 - 27188589
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27188491 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 27188589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 21254858 - 21254753
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21254858 agcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcactatgagcttatagcttatttcacgagc 21254759  T
Q  238 ttataa 243  Q
    ||||||    
T  21254758 ttataa 21254753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 40637321 - 40637216
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40637321 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggcaacactttttcaccatgagcttatagcttatttcacgagc 40637222  T
Q  238 ttataa 243  Q
    ||||||    
T  40637221 ttataa 40637216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 42375943 - 42375839
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42375943 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaa-ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 42375845  T
Q  238 ttataa 243  Q
    ||||||    
T  42375844 ttataa 42375839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 44743711 - 44743816
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| ||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44743711 agcttttagctcttagcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 44743810  T
Q  238 ttataa 243  Q
    ||||||    
T  44743811 ttataa 44743816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 31511301 - 31511399
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31511301 agcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 31511399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 21374627 - 21374732
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||||||||||||||||||||| |||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21374627 agcttttagcttttagcttatagcttataagcttgtttgacaaaaaaaattctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 21374726  T
Q  238 ttataa 243  Q
    ||||||    
T  21374727 ttataa 21374732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 36436124 - 36436252
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | |||||||||||||||||||||| ||||||||||||||||||       ||| |||||||||||||||||    
T  36436124 tctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatatcttataagctcgtttgacaaaaaa-gctatgtttggtaacactttt 36436215  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  36436216 tcaccatgagcttatagcttatttcacgagcttataa 36436252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 47471119 - 47471018
Alignment:
Q  142 tttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttat 241  Q
    |||||||||||||||||||||||||||||||||||||       | |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47471119 tttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttat 47471020  T
Q  242 aa 243  Q
    ||    
T  47471019 aa 47471018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 43134399 - 43134503
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43134399 agcttttagcttttagcttatagcttataagctcgtttcacaaaaaa-gctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagc 43134497  T
Q  238 ttataa 243  Q
    ||||||    
T  43134498 ttataa 43134503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 35587580 - 35587678
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||        ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35587580 agcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttgataacactttttcaccatgagcttatagcttatttcacgagcttataa 35587678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 40106159 - 40106061
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||  |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40106159 agcttttagctcttagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 40106061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 48832207 - 48832109
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||| |||||||||||||||||||||       |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  48832207 agcttttagcttttagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccgtgagcttatagcttatttcacgagcttataa 48832109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 483143 - 483038
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||| ||       ||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  483143 agcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctttgtttggtaacactttttgaccatgagcttatagcttatttcacgagc 483044  T
Q  238 ttataa 243  Q
    ||||||    
T  483043 ttataa 483038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 9487401 - 9487506
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||| ||||       | |||||||||||||||||||| || ||||||||||||||||||||||||||    
T  9487401 agcttttagcttttagcttatagcttataagctcgtctgacaaaaaaagttctgtttggtaacacttttttactatgagcttatagcttatttcacgagc 9487500  T
Q  238 ttataa 243  Q
    ||||||    
T  9487501 ttataa 9487506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 40258851 - 40258956
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| ||||||||||||||||||||| |||||||       ||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40258851 agcttttagctcttagcttatagcttataagcttgtttgacagaaaaagctatgtttggtaacactttttcaccatgagcttataacttatttcacgagc 40258950  T
Q  238 ttataa 243  Q
    ||||||    
T  40258951 ttataa 40258956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 33203826 - 33203724
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    ||||||||||||| |||||| ||||||| || ||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33203826 ttttagcttttagtttatagtttataagttcctttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 33203727  T
Q  241 taa 243  Q
    |||    
T  33203726 taa 33203724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 45222227 - 45222129
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||| |||||||||||||||||       | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45222227 agcttttagcttatagtttataagctcgtttgacaaaaaaagttctgtttggtaacaccttttcaccatgagcttatagcttatttcacgagcttataa 45222129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 21313950 - 21313845
Alignment:
Q  140 cttttagcttttagcttatagcttataagctcgtttgacnnnnnnn--gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||| ||| |||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21313950 cttttagctcttaacttatagcttataagctcgtttgacaaaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacaagc 21313851  T
Q  238 ttataa 243  Q
    ||||||    
T  21313850 ttataa 21313845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 240
Target Start/End: Original strand, 21741936 - 21742068
Alignment:
Q  102 taggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngct-ctgtttggtaac 200  Q
    |||| ||||||||||||||||||||||       | ||||||||| |||||||||||||||||||||||||||||||         | ||||||||||||    
T  21741936 tagggtctgtttggttaaccccaaaaa-------agagcttttagattttagcttatagcttataagctcgtttgacaaaaaaaaattctgtttggtaac 21742028  T
Q  201 actttttcaccatgagcttatagcttatttcacgagctta 240  Q
    || |||||||||||||||||||||||||||||||||||||    
T  21742029 accttttcaccatgagcttatagcttatttcacgagctta 21742068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 44596604 - 44596709
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| ||||||||||| |||||||||||||| ||         |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44596604 agcttttagctcttagcttatagtttataagctcgtttcacaaaaaaaattctgtttggtaacacttttttaccatgagcttatagcttatttcacgagc 44596703  T
Q  238 ttataa 243  Q
    ||||||    
T  44596704 ttataa 44596709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 48313608 - 48313480
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | |||||||||||||||| |||||| ||||||| |||||||||       |||||| ||||||||||||||    
T  48313608 tctgtttggttaaccccaaaaa-------agagcttttagcttttaggttatagtttataagttcgtttgacaaaaaa-gctctgattggtaacactttt 48313517  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||| |||||||||    
T  48313516 tcaccatgagcttatagcttatttcacaagcttataa 48313480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 19832137 - 19832046
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||||||||||||||||||        |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19832137 agcttttagcttataagctcgtttgataaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttatttcacgagcttataa 19832046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 49148326 - 49148429
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||| ||||||||||||||  ||||||       ||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  49148326 agcttttagctcttagctaatagcttataagcttttttgacaaaaaaagctctgtttagtaacacttttccaccatgagcttatagcttatttcacgagc 49148425  T
Q  238 ttat 241  Q
    ||||    
T  49148426 ttat 49148429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 33026918 - 33026975
Alignment:
Q  186 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33026918 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 33026975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 34709234 - 34709332
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||| ||||||||||| | |||||||       ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34709234 agcttttagcttttagcttataagtttgtttgactaaaaaagctctgtctggtaacactttttcaccatgagcttatagtttatttcacgagcttataa 34709332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 47587262 - 47587161
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    ||||||||||||||||||||||||||| ||||| |||         |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47587262 ttttagcttttagcttatagcttataaactcgtctgataaaaaaaactctgtttggtaacactttt-caccatgagcttatagcttatttcacgagctta 47587164  T
Q  241 taa 243  Q
    |||    
T  47587163 taa 47587161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 48590756 - 48590813
Alignment:
Q  186 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48590756 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 48590813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 27655834 - 27655729
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||| |||||| |||||| ||||||||||||||||||||        |||||||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  27655834 agcttatagcttatagcttttagcttataagctcgtttgataaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttatttcaagagc 27655735  T
Q  238 ttataa 243  Q
    ||||||    
T  27655734 ttataa 27655729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 36407222 - 36407327
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| || ||||||||||||||||||| |||||| ||       | |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  36407222 agcttttaactcttagcttatagcttataagttcgtttcacaaaaaaagttctgtttggtaacactttttgaccatgagcttataacttatttcacgagc 36407321  T
Q  238 ttataa 243  Q
    ||||||    
T  36407322 ttataa 36407327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 28425767 - 28425667
Alignment:
Q  143 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    ||||||| ||||||||||||||||| ||||||||||       | | |||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  28425767 ttagcttatagcttatagcttataaactcgtttgacaaaaaatgttttgtttggtaactttttttcaccatgagcttatagcttatttcacgagcttata 28425668  T
Q  243 a 243  Q
    |    
T  28425667 a 28425667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 17192599 - 17192498
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    |||||||| ||| ||||||| ||||||| |||||||||       ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  17192599 ttttagctcttaacttatagtttataagttcgtttgacaaaaaaagctctgtttggtaacactttt-caccatgagtttatagcttatttcacgagctta 17192501  T
Q  241 taa 243  Q
    |||    
T  17192500 taa 17192498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 21316730 - 21316640
Alignment:
Q  153 gcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||||| |||||||||||||||||||||  |||||||||    
T  21316730 gcttatagcttataagctcgtttgaccaaaaaaactctgtttggtaacactttttcactatgagcttatagcttatttcataagcttataa 21316640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 38481286 - 38481372
Alignment:
Q  150 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    ||||||||||||||||||| |||||||||       ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  38481286 ttagcttatagcttataagttcgtttgacaaaaacagctctgtttggtaacactttttcaccatgaatttatagcttatttcacgag 38481372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 11466200 - 11466095
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||| ||| || |||||| ||||||||||||||||||||        |||||||||||||| ||||||| ||||||||||||||||||||||||||| |    
T  11466200 agcttatagtttatagcttttagcttataagctcgtttgataaaaaaagctctgtttggtaatactttttaaccatgagcttatagcttatttcacgaac 11466101  T
Q  238 ttataa 243  Q
    ||||||    
T  11466100 ttataa 11466095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 9485727 - 9485815
Alignment:
Q  155 ttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||| |||||||||        |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9485727 ttatagcttataagttcgtttgacaaaaaaaactctctttgataacactttttcaccatgagcttatagcttatttcacgagcttataa 9485815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 243
Target Start/End: Original strand, 17844544 - 17844643
Alignment:
Q  144 tagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||| ||| |||||| |||||||||||| ||||       ||||||||||||||  || |||||||||||||||||||||||||||||||||||||||    
T  17844544 tagcttatagtttatagtttataagctcgtctgacaaaaaaagctctgtttggtaatgctatttcaccatgagcttatagcttatttcacgagcttataa 17844643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 23029790 - 23029889
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||||||||||||||||||||| ||||        ||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  23029790 agcttatagcttatagcttataagctcgtctgacgaaaattagctttgtttggtaatgctttttcaccatgagcttatagcttatttcacgagcttataa 23029889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 12345180 - 12345123
Alignment:
Q  186 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  12345180 gctctgtttggtaacactttttcacgaagagcttatagcttatttcacgagcttataa 12345123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 1342777 - 1342875
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||||||||||||||||||||| ||||       ||||||||||||||| |||||| || | |||||||||||||||||||  |||||||||    
T  1342777 agcttatagcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgcttttttacaacgagcttatagcttatttcagaagcttataa 1342875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 38531294 - 38531238
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||    
T  38531294 ctctgtttggtaacactttttcaccatgatctaatagcttattttacgagcttataa 38531238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 22642362 - 22642307
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||||| ||||||    
T  22642362 tctgtttggtaacggtttttcaccacgagcttatagcttatttcacgagtttataa 22642307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 48620455 - 48620556
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    |||||||| ||||||||||| |||||| || |||||||        || ||||||||||||||||| || |||||| |||||| ||||||||||||||||    
T  48620455 ttttagctcttagcttatagtttataaacttgtttgacggaaaaaactttgtttggtaacactttt-catcatgagtttatagtttatttcacgagctta 48620553  T
Q  241 taa 243  Q
    |||    
T  48620554 taa 48620556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 46757717 - 46757809
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||| ||||        ||||||||||||||| |||||| || | ||||||||| ||||||||| ||||||||||    
T  46757717 agcttatagcttataagctcgtctgacaaaaaaaagctctgtttggtaacgcttttttacaacgagcttataacttatttcatgagcttataa 46757809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 46879637 - 46879580
Alignment:
Q  186 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||| ||||||| |||||| || | ||||||||||||||||||| ||||||||||    
T  46879637 gctctgtctggtaacgcttttttacaacgagcttatagcttatttcaggagcttataa 46879580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 24170803 - 24170843
Alignment:
Q  203 tttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  24170803 tttttcaccatgagtttatagcttatttcatgagcttataa 24170843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 7884790 - 7884741
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| ||| ||||||||||||||| |||||||| ||||| ||||||    
T  7884790 tctgtttgttaatactttttcaccatgaacttatagcgtattttacgagc 7884741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 8e-42; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 102 - 243
Target Start/End: Original strand, 1917994 - 1918127
Alignment:
Q  102 taggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaaca 201  Q
    ||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  1917994 taggctctgtttggttaaccc-aaaaagtagctt-------ttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaaca 1918085  T
Q  202 ctttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1918086 ctttttcaccatgagcttatagcttatttcacgagcttataa 1918127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 13121745 - 13121617
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  13121745 tctgtttggttaaccccaaaaag--------agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttt 13121654  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  13121653 tcaccatgagcttatagcttatttcacgagcttataa 13121617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 33562033 - 33561928
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33562033 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 33561934  T
Q  238 ttataa 243  Q
    ||||||    
T  33561933 ttataa 33561928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 39826597 - 39826702
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39826597 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 39826696  T
Q  238 ttataa 243  Q
    ||||||    
T  39826697 ttataa 39826702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 42064455 - 42064350
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42064455 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 42064356  T
Q  238 ttataa 243  Q
    ||||||    
T  42064355 ttataa 42064350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 44909814 - 44909942
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    |||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||||||||||       |||||||||||||||||||||    
T  44909814 tctgtttggttaaccccaaaaag--------agcttttagcttttaacttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttt 44909905  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  44909906 tcaccatgagcttatagcttatttcacgagcttataa 44909942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 17046702 - 17046831
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||||    
T  17046702 tctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctttgtttggtaacactttt 17046794  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  17046795 tcaccatgagcttatagcttatttcacgagcttataa 17046831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 17500023 - 17499918
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17500023 agcttttagcttttagtttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 17499924  T
Q  238 ttataa 243  Q
    ||||||    
T  17499923 ttataa 17499918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 19899073 - 19898941
Alignment:
Q  104 ggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacact 203  Q
    |||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||| |||||||||       | ||||||||||||||||    
T  19899073 ggctctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagttcgtttgacaaaaaaagttctgtttggtaacact 19898981  T
Q  204 ttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19898980 ttttcaccatgagcttatagcttatttcacgagcttataa 19898941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 26204271 - 26204376
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26204271 agcttttagcttttagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 26204370  T
Q  238 ttataa 243  Q
    ||||||    
T  26204371 ttataa 26204376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 29586155 - 29586260
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29586155 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagc 29586254  T
Q  238 ttataa 243  Q
    ||||||    
T  29586255 ttataa 29586260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 31150563 - 31150458
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31150563 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgttgggtaacactttttcaccatgagcttatagcttatttcacgagc 31150464  T
Q  238 ttataa 243  Q
    ||||||    
T  31150463 ttataa 31150458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 102 - 243
Target Start/End: Complemental strand, 36301270 - 36301138
Alignment:
Q  102 taggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaaca 201  Q
    ||||||||||||||||||||| ||||||        |||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||    
T  36301270 taggctctgtttggttaacccaaaaaag--------agcttttagcttttagcttatagcttataagctcgtttgacaaaaaa-gctctgtttgataaca 36301180  T
Q  202 ctttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36301179 ctttttcaccatgagcttatagcttatttcacgagcttataa 36301138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 33524501 - 33524630
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||| ||||||        |||||||||||||||||||||    
T  33524501 tctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagcttgtttgataaaaaaagctctgtttggtaacactttt 33524593  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  33524594 tcaccatgagcttatagcttatttcacgagcttataa 33524630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 2497919 - 2498024
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2497919 agcttttagcttttagcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacaccttttcaccatgagcttatagcttatttcacgagc 2498018  T
Q  238 ttataa 243  Q
    ||||||    
T  2498019 ttataa 2498024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 36838833 - 36838728
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36838833 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttctccatgagcttatagcttatttcacgagc 36838734  T
Q  238 ttataa 243  Q
    ||||||    
T  36838733 ttataa 36838728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 47134669 - 47134564
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47134669 agcttttagcttttaccttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcatgagc 47134570  T
Q  238 ttataa 243  Q
    ||||||    
T  47134569 ttataa 47134564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 26843746 - 26843853
Alignment:
Q  136 atagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacga 235  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  26843746 atagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctatttgataatactttttcaccatgagcttatagcttatttcacga 26843845  T
Q  236 gcttataa 243  Q
    ||||||||    
T  26843846 gcttataa 26843853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 30721762 - 30721656
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30721762 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaaagctctgtttggtaacactttttcaccatgaacttatagcttatttcacgag 30721663  T
Q  237 cttataa 243  Q
    |||||||    
T  30721662 cttataa 30721656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 50351036 - 50351134
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50351036 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttaaccatgagcttatagcttatttcacgagcttataa 50351134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 2479157 - 2479262
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||| | |||||| ||||||||||||||||||||    
T  2479157 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttatcatgagtttatagcttatttcacgagc 2479256  T
Q  238 ttataa 243  Q
    ||||||    
T  2479257 ttataa 2479262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 7711092 - 7710987
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7711092 agcttttagcttttagcttatagcttataagttcgtttgacaaaaaaaactctgtttggtaacactttttcatcatgagcttatagcttatttcacgagc 7710993  T
Q  238 ttataa 243  Q
    ||||||    
T  7710992 ttataa 7710987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 38676486 - 38676591
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||| ||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  38676486 agcttttagcttttaacttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgaac 38676585  T
Q  238 ttataa 243  Q
    ||||||    
T  38676586 ttataa 38676591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 38967594 - 38967497
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38967594 agcttttagcttatagcttataagctcgtttgacaaaaaa-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 38967497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 32368477 - 32368373
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||| |||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32368477 agcttttaacttttagcttatagcttataagcttgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttataacttatttcacgagc 32368378  T
Q  238 ttata 242  Q
    |||||    
T  32368377 ttata 32368373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 29704222 - 29704117
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||  ||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29704222 agcttttaatttttagcttatagcttataagcttgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttataacttatttcacgagc 29704123  T
Q  238 ttataa 243  Q
    ||||||    
T  29704122 ttataa 29704117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 49220605 - 49220506
Alignment:
Q  144 tagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  49220605 tagcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccgtgagcttacagcttatttcacgagcttataa 49220506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 322869 - 322967
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||| |||||||       | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  322869 agcttttagcttatagcttataagcttgtttgacaaaaaaagttctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataa 322967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 3270663 - 3270760
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3270663 agcttttagcttatagcttataagctcgtttgacaaaaaaaa-tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 3270760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 3660942 - 3661047
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||| | |||||||||||||||||||||| ||||||       | ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3660942 agcttttagttcttagcttatagcttataagctcatttgacaacaaaagttctgtttggtaacactttttcaccatgagcttatatcttatttcacgagc 3661041  T
Q  238 ttataa 243  Q
    ||||||    
T  3661042 ttataa 3661047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 15348821 - 15348926
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| || |||||||||||||||||||||||||         || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15348821 agcttttagctctttgcttatagcttataagctcgtttgataaaaaaaactatgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 15348920  T
Q  238 ttataa 243  Q
    ||||||    
T  15348921 ttataa 15348926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 25601983 - 25602088
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| ||||||||||| |||||||||||||||||       ||||||||||||| |||||||| ||||||| |||||||||||||||||||||    
T  25601983 agcttttagctcttagcttataggttataagctcgtttgacaaaaaaagctctgtttggtatcacttttttaccatgaccttatagcttatttcacgagc 25602082  T
Q  238 ttataa 243  Q
    ||||||    
T  25602083 ttataa 25602088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 34319386 - 34319491
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||| ||       | |||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  34319386 agcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagttctgtttggtaacactttttgaccatgaccttatagcttatttcacgagc 34319485  T
Q  238 ttataa 243  Q
    ||||||    
T  34319486 ttataa 34319491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 1507879 - 1507776
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctt 239  Q
    |||||||| |||||||||||||||||||||||||||||        |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  1507879 ttttagctcttagcttatagcttataagctcgtttgacaaaaagaagctctgtttggtaacactttttcaccattagtttatagcttatttcacgagctt 1507780  T
Q  240 ataa 243  Q
    ||||    
T  1507779 ataa 1507776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 34086970 - 34087068
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||||||||||||||||||||| ||||       |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  34086970 agcttatagcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagctaatttcacgagcttataa 34087068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 30774082 - 30774183
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||| ||||||||||||||| ||||||||        |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  30774082 agcttttagcttttaacttatagcttataagttcgtttga----taaagctctgtttggtaacactttttcaccataagtttatagcttatttcacgagc 30774177  T
Q  238 ttataa 243  Q
    ||||||    
T  30774178 ttataa 30774183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 238
Target Start/End: Original strand, 46369809 - 46369904
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnng--ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagct 238  Q
    ||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46369809 agcttttagcttatagcttataagctcgtttgacaaaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagct 46369904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 15313243 - 15313345
Alignment:
Q  140 cttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctt 239  Q
    ||||||||||||| ||||||||||||||| ||||||||        ||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  15313243 cttttagcttttaacttatagcttataagttcgtttgataaaaaaagctctgtttggtaacactttt-caccatgagcttatagcttatttcacaagctt 15313341  T
Q  240 ataa 243  Q
    ||||    
T  15313342 ataa 15313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 29374327 - 29374432
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||| |||||| |||||| ||||||||||||||||||||        |||||||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  29374327 agcttatagcttatagcttttagcttataagctcgtttgataaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttatttcaagagc 29374426  T
Q  238 ttataa 243  Q
    ||||||    
T  29374427 ttataa 29374432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 37703716 - 37703772
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37703716 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 37703772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 28429076 - 28429131
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28429076 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 28429131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 37672439 - 37672383
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37672439 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagtttataa 37672383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 39583100 - 39583198
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||| | |||||||         ||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  39583100 agcttttagcttatagcttataagtttgtttgacaaaaaaaattctgtttggtaacactttttcaccatgagcttataacttatttaacgagtttataa 39583198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 9770058 - 9770006
Alignment:
Q  191 gtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9770058 gtttgataacactttttcaccatgagcttatagcttatttcacgagcttataa 9770006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 50171435 - 50171330
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||| |||||||  |||||||||||||||| |||||||         ||||||||||||||| |||| ||||||||||||||||||||||||| |||    
T  50171435 agcttttcgcttttaatttatagcttataagcttgtttgacaaaaaaaattctgtttggtaacacctttttaccatgagcttatagcttatttcacaagc 50171336  T
Q  238 ttataa 243  Q
    ||||||    
T  50171335 ttataa 50171330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 22098965 - 22099020
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  22098965 tctgtttggtaacattttttcaccatgagcttatagcttatttcacgagtttataa 22099020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 36043388 - 36043333
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  36043388 tctgtttggtaacagtttttcaccatgagcttatagtttatttcacgagcttataa 36043333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 49185273 - 49185218
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  49185273 tctgtttggtaacactttttcaccataagcttatagcttatttcacaagcttataa 49185218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 3391165 - 3391222
Alignment:
Q  186 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||    
T  3391165 gctctgtttggtaatactttttcaccatgaacttatagtttatttcacgagcttataa 3391222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 7781295 - 7781197
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| |||||||||||||||||||||||||||        |||||||||||||     ||||||||| ||||||||||||||||||||||||||||||    
T  7781295 agcttatagcttatagcttataagctcgtttgataaaaaaagctctgtttggtactgtcttttcaccacgagcttatagcttatttcacgagcttataa 7781197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 8221374 - 8221268
Alignment:
Q  137 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    |||||| |||||| ||||  ||||||||||||||||| ||||       |||||||||||||||  ||||| || | |||||||||||||||||||||||    
T  8221374 tagcttatagcttatagcggatagcttataagctcgtctgacaaaaaaagctctgtttggtaacggttttttacaacgagcttatagcttatttcacgag 8221275  T
Q  237 cttataa 243  Q
    |||||||    
T  8221274 cttataa 8221268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 43727074 - 43727123
Alignment:
Q  194 tggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43727074 tggtaacactttttcaccatgagcttatagcttatttcatgagcttataa 43727123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 50540768 - 50540874
Alignment:
Q  137 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    |||||| || ||| ||||||||||||||||| |||||||||        | |||||||||||| ||||||||||||| | ||||||||||||||||||||    
T  50540768 tagcttataacttatagcttatagcttataaactcgtttgataaaaaaagttctgtttggtaatactttttcaccataaacttatagcttatttcacgag 50540867  T
Q  237 cttataa 243  Q
     ||||||    
T  50540868 tttataa 50540874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 51423123 - 51423017
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    |||||||| |||||||||||||||||||||| | ||||||         | |||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  51423123 agcttttaacttttagcttatagcttataagtttgtttgataaaaaaaagttctgtttgataacactttttcaccatgaacttatagcttatttcacgag 51423024  T
Q  237 cttataa 243  Q
     ||||||    
T  51423023 tttataa 51423017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 34318415 - 34318508
Alignment:
Q  150 ttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||| ||| |||       ||||||||||||||   |||||||||| ||||||||||||||||| ||||||||||||    
T  34318415 ttagcttatagcttataagcttgttcgacaaaaaaagctctgtttggtaatggtttttcaccacgagcttatagcttattttacgagcttataa 34318508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 25134858 - 25134950
Alignment:
Q  151 tagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||||||||||||||| ||||       | |||||||||||||| ||||| || | ||||||||||||||||||||||||||||||    
T  25134858 tagctaatagcttataagctcgtctgacaaaaaaagttctgtttggtaacagttttttacaacgagcttatagcttatttcacgagcttataa 25134950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 9169051 - 9169149
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | |||||||| |||||||||||||||||||||| ||||||||        |||||||||||||||||||||    
T  9169051 tctgtttggttaaccccaaaaa-------agagcttttaacttttagcttatagcttataagttcgtttgaaaaaaaaagctctgtttggtaacactttt 9169143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 42614222 - 42614168
Alignment:
Q  189 ctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  42614222 ctgtttggtaacattttttcaccatgagcttctagcttatttcacaagcttataa 42614168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 49240405 - 49240314
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||| |||| ||||       ||||||||||||||  ||||||||| |||| |||||||||||||||| ||||||||||    
T  49240405 agcttatagcttataagttcgtatgacaaaaaaagctctgtttggtaatgctttttcactatgaacttatagcttatttcatgagcttataa 49240314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 49822242 - 49822200
Alignment:
Q  201 actttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  49822242 actttttcaccatgagcttatagcttatttcacgagcttataa 49822200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 5697523 - 5697579
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||| |||||||||| ||||| || ||||||||||||||||||||||||||||||||    
T  5697523 ctctatttggtaacagttttttacaatgagcttatagcttatttcacgagcttataa 5697579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 18347553 - 18347449
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||| |||||| |||||||||||||||||| | |||||||       ||||||||||||||    ||||||||| |||||||||||||||||||| |||    
T  18347553 agcttatagcttatagcttatagcttataagtttgtttgacaaaaaa-gctctgtttggtaatgtcttttcaccacgagcttatagcttatttcacaagc 18347455  T
Q  238 ttataa 243  Q
    ||||||    
T  18347454 ttataa 18347449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 44719096 - 44719004
Alignment:
Q  151 tagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||| ||||| |       ||||||||||||||    ||||||||| ||||||||||||||||| ||||||||||||    
T  44719096 tagcttatagcttataagcttgtttggcaaaaaaagctctgtttggtaatgtcttttcaccacgagcttatagcttattttacgagcttataa 44719004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 52703236 - 52703144
Alignment:
Q  151 tagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||         ||||||||||||  || | | |||| ||||||||||||||||||||||||||||||    
T  52703236 tagcttatagcttataagctcgtttgacaaaaaaaattctgtttggtaatgctctcttaccacgagcttatagcttatttcacgagcttataa 52703144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 30495282 - 30495240
Alignment:
Q  189 ctgtttggtaacactttttcaccatgagcttatagcttatttc 231  Q
    ||||||||||| ||||||| |||||||||||||||||||||||    
T  30495282 ctgtttggtaatactttttgaccatgagcttatagcttatttc 30495240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 46088139 - 46088033
Alignment:
Q  137 tagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgag 236  Q
    |||||| |||||| ||||  |||| |||||||||||||||||       |||||||||| |||   |||||| ||| ||||||||| |||||||||||||    
T  46088139 tagcttatagcttatagcagatagtttataagctcgtttgactagaaaagctctgtttgataatgttttttcgccacgagcttataacttatttcacgag 46088040  T
Q  237 cttataa 243  Q
     ||||||    
T  46088039 tttataa 46088033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 7024840 - 7024924
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttata 222  Q
    ||||||||||| ||||| ||||||||||||| |||||||||         ||| |||| ||||| ||||||||||||||||||||    
T  7024840 agcttttagctcttagcatatagcttataagttcgtttgacaaaaaaaattctatttgataacattttttcaccatgagcttata 7024924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 22099726 - 22099688
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttga 177  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  22099726 agcttttag-ttttagcttatagcttataagctcgtttga 22099688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 52071292 - 52071222
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttata 222  Q
    |||||||||||||||||||| ||||||       ||||||||||||||   |||||||||| |||||||||    
T  52071292 agcttatagcttataagctcatttgacaaaaaaagctctgtttggtaatggtttttcaccacgagcttata 52071222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 40719495 - 40719535
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgac 178  Q
    ||||||||||||| || |||||| |||||||||||||||||    
T  40719495 agcttttagctttgagtttatagtttataagctcgtttgac 40719535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 44956340 - 44956380
Alignment:
Q  203 tttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| |||||||||||||||||||||| ||||| ||||||    
T  44956340 ttttttaccatgagcttatagcttatttaacgagattataa 44956380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 46056499 - 46056459
Alignment:
Q  203 tttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||| || ||||||| |||||||||||||||||||    
T  46056499 tttttcaccacgaacttatagtttatttcacgagcttataa 46056459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 3e-41; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 103 - 243
Target Start/End: Original strand, 32731724 - 32731857
Alignment:
Q  103 aggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacac 202  Q
    ||||||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||       | |||||||||||||||    
T  32731724 aggctctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacac 32731816  T
Q  203 tttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  32731817 tttttcaccatgagcttatagcttatttcacgagcttataa 32731857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 2442418 - 2442523
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2442418 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 2442517  T
Q  238 ttataa 243  Q
    ||||||    
T  2442518 ttataa 2442523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 31100168 - 31100063
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31100168 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 31100069  T
Q  238 ttataa 243  Q
    ||||||    
T  31100068 ttataa 31100063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 31452107 - 31452002
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31452107 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 31452008  T
Q  238 ttataa 243  Q
    ||||||    
T  31452007 ttataa 31452002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 34233068 - 34232963
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34233068 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 34232969  T
Q  238 ttataa 243  Q
    ||||||    
T  34232968 ttataa 34232963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 12297334 - 12297463
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | |||||||| ||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  12297334 tctgtttggttaaccccaaaaa-------agagcttttaccttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttt 12297426  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  12297427 tcaccatgagcttatagcttatttcacgagcttataa 12297463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 10856133 - 10856231
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10856133 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 10856231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 1806468 - 1806363
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||| ||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1806468 agcttttagcttatagcttatagcttataagctcgtttgactaaaaaatctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 1806369  T
Q  238 ttataa 243  Q
    ||||||    
T  1806368 ttataa 1806363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 20804983 - 20805088
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||| |||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20804983 agcttttagtttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 20805082  T
Q  238 ttataa 243  Q
    ||||||    
T  20805083 ttataa 20805088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 14227712 - 14227584
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttt 206  Q
    ||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||        ||| |||||||||||||||||    
T  14227712 tctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagctcgtttga-taaaaaagctttgtttggtaacactttt 14227621  T
Q  207 tcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  14227620 tcaccatgagcttatagcttatttcacgagcttataa 14227584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 30811299 - 30811197
Alignment:
Q  141 ttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    |||||||||||||||||||||||||||| |||||||||       |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30811299 ttttagcttttagcttatagcttataagttcgtttgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagctta 30811200  T
Q  241 taa 243  Q
    |||    
T  30811199 taa 30811197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 558360 - 558459
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  558360 agcttttagcttatagcttataagctcgtttgacaaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 558459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 34903953 - 34904043
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttat 228  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  34903953 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttat 34904043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 33453734 - 33453834
Alignment:
Q  143 ttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 242  Q
    ||||||| |||||||||| ||||||| |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33453734 ttagcttatagcttatagtttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttata 33453833  T
Q  243 a 243  Q
    |    
T  33453834 a 33453834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 12432760 - 12432669
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12432760 agcttatagcttataagctcgtttgacaaaaaaatctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 12432669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 34685161 - 34685064
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  34685161 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacattttca-catgagcttatagcttatttcacgagcttataa 34685064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 33540865 - 33540774
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33540865 agcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccataagcttatagcttatttcacgagcttataa 33540774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 34439683 - 34439781
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||||||||||||||||||||| ||||        ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34439683 agcttatagcttatagcttataagctcgtctgacaaaaaaaactctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataa 34439781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 7317764 - 7317659
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| ||| ||||||||||||||| |||||| ||       |||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  7317764 agcttttagctcttaacttatagcttataagttcgtttcacagaaaaagctctgtttggtaacattttttgaccatgagcttatagcttatttcacgagc 7317665  T
Q  238 ttataa 243  Q
    ||||||    
T  7317664 ttataa 7317659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 29415058 - 29414974
Alignment:
Q  144 tagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttat 228  Q
    ||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  29415058 tagctcttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttat 29414974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 3108153 - 3108054
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagctt-atttcacgagcttataa 243  Q
    ||||| ||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  3108153 agcttatagcttatagcttataagctcgtttgacaaaaaaagctctatttggtaacactttttcaccatgagcttataacttaatttcacgagcttataa 3108054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 28076423 - 28076521
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||||||||||||||| ||||| ||||       |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  28076423 agcttatagcttatagcttataaactcgtctgacaaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttatttcacgagcttataa 28076521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 3636793 - 3636689
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| ||| ||||||||||||||||| |||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3636793 agcttttagctcttaacttatagcttataagcttgtttgacaaaaaaat-tctgtttggtaacactttttcaccataagcttatagcttatttcacgagc 3636695  T
Q  238 ttataa 243  Q
    ||||||    
T  3636694 ttataa 3636689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 5681527 - 5681618
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||| |||||||| || ||||||       ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5681527 agcttataacttataagttcttttgacaaaaaaagctctgtttggcaacactttttcaccatgagcttatagcttatttcacgagcttataa 5681618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 11015590 - 11015685
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagctta 240  Q
    ||||| ||||||||||||||||||||||| ||||        ||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  11015590 agcttatagcttatagcttataagctcgtctgacaaaaaaaactctgtttggtaatactttttcaccatgagcttataacttatttcacgagctta 11015685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 5943035 - 5943090
Alignment:
Q  188 tctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5943035 tctgtttgataacactttttcaccatgagcttatagcttatttcacgagcttataa 5943090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 29823176 - 29823084
Alignment:
Q  151 tagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||       |||||||||| ||||| |||||||||||||||| |||||||||||  |||||||||||    
T  29823176 tagcttatagcttataagctcgtttgacaaaaaaagctctgtttgataacattttttcaccatgagctaatagcttattttgcgagcttataa 29823084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 5301741 - 5301650
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||| ||||       | ||||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  5301741 agcttatagcttataagctcgtatgacaaaaaaagttctgtttggtaatgttttttcaccatgagcttatagcttatttcacgagcttataa 5301650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 6709835 - 6709752
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacga 235  Q
    ||||||||||||||||| |||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6709835 agcttatagcttataagttcgtttgacaaaaaaaattctgtttggtaacactttttcaccatgagcttatagcttatttcacga 6709752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 31049379 - 31049432
Alignment:
Q  190 tgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31049379 tgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataa 31049432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 2970722 - 2970773
Alignment:
Q  192 tttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  2970722 tttggtaacacttttttaccatgagtttatagcttatttcacgagcttataa 2970773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 23648201 - 23648292
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||| |||||||       ||||||||||||||  || | | |||| ||||||||||||||||||||||||||||||    
T  23648201 agcttatagcttataagcttgtttgacaaaaaaagctctgtttggtaatgctctcttaccacgagcttatagcttatttcacgagcttataa 23648292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 6104801 - 6104719
Alignment:
Q  161 cttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||       ||||||||||||||   | |||||||| |||||||||||||||||| |||||||||||    
T  6104801 cttataagctcgtttgaccaaaaaagctctgtttggtaatggtctttcaccacgagcttatagcttatttcgcgagcttataa 6104719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 12140968 - 12140927
Alignment:
Q  202 ctttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  12140968 ctttttcaccatgagcttatagtttatttcacgagcttataa 12140927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 7292688 - 7292597
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||  ||        |||||||||| |||| |||||| || |||||||||||||||||||||  |||||||||    
T  7292688 agcttatagcttataagctcgtcggataaaaaaagctctgtttgataacgcttttttacaatgagcttatagcttatttcagaagcttataa 7292597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 21894311 - 21894350
Alignment:
Q  204 ttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  21894311 ttttcaccacgagattatagcttatttcacgagcttataa 21894350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 20563458 - 20563492
Alignment:
Q  209 accatgagcttatagcttatttcacgagcttataa 243  Q
    |||| ||||||||||||||||||||||||||||||    
T  20563458 accacgagcttatagcttatttcacgagcttataa 20563492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 243
Target Start/End: Complemental strand, 15591228 - 15591199
Alignment:
Q  214 gagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||    
T  15591228 gagcttatagcttatttcacgagcttataa 15591199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 22588 - 22693
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22588 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 22687  T
Q  238 ttataa 243  Q
    ||||||    
T  22688 ttataa 22693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 126913 - 126808
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  126913 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 126814  T
Q  238 ttataa 243  Q
    ||||||    
T  126813 ttataa 126808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 12870 - 12765
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12870 agcttttagcttttagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttgacgagc 12771  T
Q  238 ttataa 243  Q
    ||||||    
T  12770 ttataa 12765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 27312 - 27182
Alignment:
Q  107 tctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgacnnnnnnn-gctctgtttggtaacacttt 205  Q
    ||||||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||        ||| ||||||||||||||||    
T  27312 tctgtttggttaaccccaaaaa-------agagcttttagcttttagcttatagcttataagctcgtttgacaaaataaagctatgtttggtaacacttt 27220  T
Q  206 ttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27219 ttcaccatgagcttatagcttatttcacgagcttataa 27182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1632 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1632
Description:

Target: scaffold1632; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 190 - 85
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||||| |||||||||||||||||||||||||| ||       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  190 agcttttagctcttagcttatagcttataagctcgtttcacaaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagc 91  T
Q  238 ttataa 243  Q
    ||||||    
T  90 ttataa 85  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 192013 - 192111
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||||||||||||||||||||| ||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  192013 agcttatagcttatagcttataagctcgtatgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataa 192111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 7050 - 7155
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagc 237  Q
    ||||||||| |||||||||||||||| |||| |||||||||       | |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7050 agcttttagtttttagcttatagcttttaagttcgtttgacaaaaaaagttctgtttggtaacacttttttaccatgagcttatagcttatttcacgagc 7149  T
Q  238 ttataa 243  Q
    ||||||    
T  7150 ttataa 7155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 41898 - 41814
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttata 222  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||    
T  41898 agcttttagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttata 41814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 431265 - 431356
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| ||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  431265 agcttttagcttataagttcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 431356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 119340 - 119287
Alignment:
Q  190 tgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| |||||| ||||| || | ||||||||||||||||||||||||||||||    
T  119340 tgtttagtaacagttttttacaacgagcttatagcttatttcacgagcttataa 119287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 28238 - 28148
Alignment:
Q  138 agcttttagcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttat 228  Q
    ||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  28238 agcttttagctcttagcttatagcttataagctcgtttgacaaaaaaagctctgtttgataacactttttcaccatgagcttatagcttat 28148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 30323 - 30225
Alignment:
Q  145 agcttttagcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||| |||||| |||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30323 agcttttagtttatagtttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagtttataa 30225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 63851 - 63942
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    |||||||||||  ||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  63851 agcttatagctcttaagctcgtttgacaaaaaaagatctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 63942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 53126 - 53069
Alignment:
Q  186 gctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  53126 gctctgtttggtaacactttttcaccatgagcttatagcctatttcacgagcttataa 53069  T

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Target: scaffold0016 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 93525 - 93434
Alignment:
Q  152 agcttatagcttataagctcgtttgacnnnnnnngctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||| |||||||||||||||||||||       |||||||||| |||||||||   |||||||||||||||||||||||||||||||||||    
T  93525 agcttttagcttataagctcgtttgacaaaaaaagctctgtttgataacactttaaaaccatgagcttatagcttatttcacgagcttataa 93434  T

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Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 243
Target Start/End: Original strand, 84325 - 84354
Alignment:
Q  214 gagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||||||||||||    
T  84325 gagcttatagcttatttcacgagcttataa 84354  T

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Target: scaffold0166 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 36320 - 36388
Alignment:
Q  103 aggctctgtttggttaaccccaaaaagtagcttatagcttttagcttttagcttatagcttataagctcgtttgac 178  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  36320 aggctctgtttggttaaccccaaaaag-------tagcttttagcttttagcttatagcttataagctcgtttgac 36388  T

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Target: scaffold0362 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 5451 - 5506
Alignment:
Q  187 ctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 243  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  5451 ctctgtttggtaacacttttttaccatgagcttata-cttatttcacgagcttataa 5506  T

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