View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6869A_low_116 (Length: 237)

Name: NF6869A_low_116
Description: NF6869A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6869A_low_116
NF6869A_low_116
[»] chr1 (14 HSPs)
chr1 (13-235)||(48234269-48234491)
chr1 (122-235)||(48739636-48739749)
chr1 (122-235)||(48739468-48739581)
chr1 (122-193)||(24666083-24666154)
chr1 (122-193)||(24666249-24666320)
chr1 (123-197)||(41468301-41468375)
chr1 (122-197)||(41468060-41468135)
chr1 (28-75)||(2331449-2331496)
chr1 (122-197)||(24665728-24665803)
chr1 (122-197)||(41468480-41468555)
chr1 (122-237)||(24665524-24665637)
chr1 (129-235)||(24665857-24665961)
chr1 (122-196)||(24665397-24665471)
chr1 (122-234)||(24666376-24666486)
[»] chr6 (43 HSPs)
chr6 (122-235)||(30405538-30405651)
chr6 (122-235)||(34961944-34962057)
chr6 (122-235)||(34961418-34961531)
chr6 (128-234)||(639077-639183)
chr6 (139-235)||(639772-639866)
chr6 (122-235)||(7655443-7655556)
chr6 (128-197)||(30405730-30405799)
chr6 (13-75)||(18345015-18345077)
chr6 (122-224)||(30405167-30405269)
chr6 (122-235)||(29616537-29616650)
chr6 (128-235)||(34961764-34961871)
chr6 (128-196)||(1578114-1578182)
chr6 (122-197)||(1578274-1578349)
chr6 (122-225)||(7655639-7655741)
chr6 (128-235)||(34962136-34962243)
chr6 (149-235)||(7655796-7655882)
chr6 (122-235)||(34961252-34961363)
chr6 (122-234)||(638739-638849)
chr6 (128-221)||(30401610-30401703)
chr6 (129-197)||(639264-639332)
chr6 (122-197)||(7656019-7656094)
chr6 (122-225)||(29616166-29616269)
chr6 (122-196)||(12600805-12600879)
chr6 (123-197)||(30405001-30405075)
chr6 (122-196)||(30405352-30405426)
chr6 (139-197)||(34967756-34967814)
chr6 (128-197)||(639429-639498)
chr6 (128-196)||(24036142-24036209)
chr6 (122-197)||(640106-640181)
chr6 (122-225)||(29616352-29616454)
chr6 (122-224)||(30404813-30404915)
chr6 (122-197)||(1577786-1577861)
chr6 (122-192)||(639589-639659)
chr6 (122-196)||(2190859-2190933)
chr6 (122-196)||(7655314-7655388)
chr6 (139-193)||(34961609-34961663)
chr6 (128-196)||(2191733-2191800)
chr6 (157-197)||(34964700-34964740)
chr6 (141-224)||(639939-640022)
chr6 (122-196)||(24037080-24037154)
chr6 (128-196)||(1577949-1578017)
chr6 (139-187)||(2192071-2192119)
chr6 (139-187)||(24035823-24035871)
[»] scaffold0049 (10 HSPs)
scaffold0049 (122-235)||(5082-5193)
scaffold0049 (129-225)||(4903-4999)
scaffold0049 (122-235)||(5266-5379)
scaffold0049 (122-197)||(5452-5527)
scaffold0049 (126-197)||(5793-5864)
scaffold0049 (122-196)||(29139-29213)
scaffold0049 (162-235)||(4768-4841)
scaffold0049 (122-195)||(5638-5711)
scaffold0049 (167-235)||(28998-29066)
scaffold0049 (122-196)||(5956-6030)
[»] chr3 (14 HSPs)
chr3 (132-235)||(11762997-11763098)
chr3 (122-196)||(49791216-49791290)
chr3 (130-197)||(51857912-51857979)
chr3 (122-197)||(51858091-51858166)
chr3 (132-193)||(11762831-11762892)
chr3 (132-197)||(11763163-11763228)
chr3 (132-202)||(11762643-11762713)
chr3 (122-196)||(11763505-11763579)
chr3 (122-196)||(49791050-49791124)
chr3 (122-196)||(49791663-49791737)
chr3 (129-197)||(49791868-49791936)
chr3 (122-192)||(11763671-11763741)
chr3 (122-197)||(49790867-49790939)
chr3 (122-196)||(11763339-11763413)
[»] chr7 (26 HSPs)
chr7 (129-235)||(35466851-35466955)
chr7 (122-196)||(35467010-35467084)
chr7 (122-196)||(8948172-8948246)
chr7 (129-234)||(13930406-13930509)
chr7 (128-196)||(15738193-15738261)
chr7 (122-197)||(15738026-15738101)
chr7 (122-233)||(8947306-8947415)
chr7 (129-197)||(44213623-44213691)
chr7 (130-197)||(8947146-8947213)
chr7 (139-197)||(8947672-8947730)
chr7 (132-197)||(13930263-13930328)
chr7 (122-197)||(8948338-8948413)
chr7 (122-196)||(13910114-13910188)
chr7 (122-196)||(13914385-13914458)
chr7 (123-197)||(35466679-35466753)
chr7 (122-197)||(13914755-13914827)
chr7 (122-198)||(8947490-8947565)
chr7 (122-194)||(13914552-13914624)
chr7 (122-197)||(15738514-15738589)
chr7 (122-196)||(13910298-13910372)
chr7 (122-196)||(35467176-35467250)
chr7 (122-196)||(35467342-35467416)
chr7 (122-201)||(8947841-8947920)
chr7 (139-187)||(13914908-13914956)
chr7 (128-196)||(15738358-15738426)
chr7 (164-196)||(17321304-17321336)
[»] chr4 (37 HSPs)
chr4 (122-197)||(13739988-13740063)
chr4 (139-224)||(13743278-13743363)
chr4 (123-197)||(47324103-47324177)
chr4 (123-197)||(47338899-47338973)
chr4 (129-225)||(43264775-43264869)
chr4 (139-196)||(43265236-43265293)
chr4 (134-234)||(47324780-47324878)
chr4 (123-235)||(47325101-47325211)
chr4 (134-234)||(47339576-47339674)
chr4 (123-235)||(47339897-47340007)
chr4 (13-75)||(617488-617550)
chr4 (144-224)||(13739826-13739904)
chr4 (131-196)||(43265743-43265808)
chr4 (122-197)||(13743447-13743522)
chr4 (162-225)||(43264622-43264685)
chr4 (146-235)||(13743101-13743188)
chr4 (122-196)||(15781173-15781247)
chr4 (122-188)||(43265065-43265131)
chr4 (122-196)||(43265900-43265974)
chr4 (128-197)||(47324274-47324343)
chr4 (143-196)||(47325283-47325336)
chr4 (128-197)||(47339070-47339139)
chr4 (143-196)||(47340079-47340132)
chr4 (128-180)||(15780601-15780653)
chr4 (122-197)||(13742898-13742973)
chr4 (139-197)||(15780821-15780879)
chr4 (122-196)||(15781339-15781412)
chr4 (122-196)||(43265568-43265642)
chr4 (122-197)||(15780970-15781042)
chr4 (122-197)||(43265385-43265457)
chr4 (140-235)||(47324618-47324713)
chr4 (140-235)||(47339414-47339509)
chr4 (160-235)||(15780656-15780731)
chr4 (122-193)||(47324434-47324505)
chr4 (122-193)||(47339230-47339301)
chr4 (122-190)||(47324934-47325002)
chr4 (122-190)||(47339730-47339798)
[»] chr2 (18 HSPs)
chr2 (122-197)||(15571584-15571659)
chr2 (122-197)||(18454396-18454471)
chr2 (13-75)||(27194730-27194792)
chr2 (13-75)||(27844544-27844606)
chr2 (128-197)||(18454210-18454279)
chr2 (122-196)||(18453213-18453287)
chr2 (144-224)||(15571743-15571821)
chr2 (131-235)||(18453342-18453444)
chr2 (123-235)||(18454526-18454636)
chr2 (128-235)||(12522779-12522884)
chr2 (132-197)||(12522961-12523026)
chr2 (28-75)||(19816891-19816938)
chr2 (28-75)||(39440970-39441017)
chr2 (122-196)||(14493350-14493424)
chr2 (134-234)||(18453675-18453773)
chr2 (128-193)||(18454048-18454113)
chr2 (129-197)||(14493151-14493219)
chr2 (160-235)||(14493281-14493354)
[»] chr8 (27 HSPs)
chr8 (122-197)||(124437-124512)
chr8 (122-235)||(23484343-23484456)
chr8 (122-235)||(23484529-23484642)
chr8 (122-225)||(23483971-23484074)
chr8 (122-197)||(23484157-23484232)
chr8 (122-197)||(34907589-34907663)
chr8 (122-224)||(23484715-23484817)
chr8 (122-197)||(32059328-32059403)
chr8 (122-235)||(124585-124696)
chr8 (122-235)||(32058701-32058812)
chr8 (122-235)||(124769-124882)
chr8 (143-235)||(34907444-34907534)
chr8 (122-197)||(23484901-23484976)
chr8 (122-197)||(34907244-34907319)
chr8 (129-230)||(32058872-32058971)
chr8 (139-192)||(23474078-23474131)
chr8 (132-235)||(32059033-32059134)
chr8 (121-193)||(32059239-32059311)
chr8 (129-196)||(124048-124115)
chr8 (122-197)||(23480079-23480154)
chr8 (129-192)||(23483812-23483875)
chr8 (122-191)||(32059500-32059569)
chr8 (128-196)||(16535511-16535578)
chr8 (161-224)||(23479932-23479995)
chr8 (122-196)||(16534998-16535072)
chr8 (164-196)||(9873491-9873523)
chr8 (139-187)||(16535849-16535897)
[»] chr5 (10 HSPs)
chr5 (139-235)||(11235021-11235117)
chr5 (122-196)||(11234724-11234798)
chr5 (122-235)||(11234853-11234966)
chr5 (128-196)||(11234558-11234626)
chr5 (122-186)||(11235236-11235300)
chr5 (128-196)||(22259565-22259632)
chr5 (28-75)||(14190701-14190748)
chr5 (122-196)||(22256581-22256655)
chr5 (158-192)||(11235396-11235430)
chr5 (139-187)||(22259903-22259951)
[»] scaffold0031 (3 HSPs)
scaffold0031 (139-197)||(84026-84084)
scaffold0031 (128-196)||(84365-84432)
scaffold0031 (122-196)||(82211-82285)
[»] scaffold0268 (1 HSPs)
scaffold0268 (128-196)||(5989-6056)


Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 235
Target Start/End: Original strand, 48234269 - 48234491
Alignment:
Q  13 agatatacatagtgctatatgacagttttgtggcgttgacaataggtcctgcattaaccttattatgttgtttgcaaatgtgaacaaattaagcttattt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48234269 agatatacatagtgctatatgacagttttgtggcgttgacaataggtcctgcattaaccttattatgttgtttgcaaatgtgaacaaattaagcttattt 48234368  T
Q  113 gtaaatgtgaactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccacca 212  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48234369 gtaaatgtgaactcgcaactcttactctaactgaaagaatcttggagtcaaagtacttggatgaacgttcaatgactaatcaaactttttttatccacca 48234468  T
Q  213 accaagcttacaagtctcaccct 235  Q
    |||||||||||||||||||||||    
T  48234469 accaagcttacaagtctcaccct 48234491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 48739636 - 48739749
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||  || ||||| || ||||||||||    
T  48739636 aactcacaactcttaccctaactgaaagagtcttggagtcaaagtacttggatgaacgttcactgactaatcaaactcttgttatcgactaaccaagctt 48739735  T
Q  222 acaagtctcaccct 235  Q
    |||| ||| |||||    
T  48739736 acaactctaaccct 48739749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 48739468 - 48739581
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| ||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||  || ||| | || ||||||||||    
T  48739468 aactcacaactcttaccctaactgaaagaatcttcgagtcaaagtacttggatgaacattcaatgactaatcaaactcttgttagcgactaaccaagctt 48739567  T
Q  222 acaagtctcaccct 235  Q
    |||| ||| |||||    
T  48739568 acaaatctaaccct 48739581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 24666154 - 24666083
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatc 193  Q
    ||||| |||||||||| | ||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  24666154 aactcacaactcttaccccaactgaaagaatcttagagtcaaagtacttggatgaacgttcaatgactaatc 24666083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 24666320 - 24666249
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatc 193  Q
    ||||| ||||||||||  ||||||| |||||| || ||||||||||||||||||||||||||||||||||||    
T  24666320 aactcacaactcttaccttaactgatagaatcttgcagtcaaagtacttggatgaacgttcaatgactaatc 24666249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 41468301 - 41468375
Alignment:
Q  123 actcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||| |||||||| | |||||| |||||||| ||||||||||||||||||||||||||||| ||||| |||||||    
T  41468301 actcacaactcttgccctaactaaaagaatcttggagtcaaagtacttggatgaacgttcactgactgatcaaac 41468375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 41468060 - 41468135
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||| | |||||| |||||||| |||||||||||||||||||||| |||| | |||||||||||||    
T  41468060 aactcacaactcttgccctaactaaaagaatcttggagtcaaagtacttggatgaccgtttattgactaatcaaac 41468135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 2331449 - 2331496
Alignment:
Q  28 tatatgacagttttgtggcgttgacaataggtcctgcattaaccttat 75  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  2331449 tatatgacagttttgtggcgttgacagtaggtcctacattaaccttat 2331496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 24665803 - 24665728
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||  ||||||||||||||| || ||||||||||||||||| || ||  |||||||||||||||    
T  24665803 aactcacaactcttagcctaactgaaagaatcttgtagtcaaagtacttggataaatgtataatgactaatcaaac 24665728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 41468480 - 41468555
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||| | |||||| |||||||| |||||| |||||| ||||||||| ||||| |||||||||||||    
T  41468480 aactcacaactcttgccctaactaaaagaatcttggagttaaagtaattggatgaatgttcattgactaatcaaac 41468555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 24665637 - 24665524
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| | |||| |||||||| || ||| ||| |||||||||||| |||||| |||||||||||  || |||||| || || |||||||    
T  24665637 aactcacaactcttacccaaactaaaagaatcttgcagtgaaaatacttggatgaatgttcaacgactaatcaaa--ttctttatcgactaatcaagctt 24665540  T
Q  222 acaagtctcaccctga 237  Q
    | || ||| |||||||    
T  24665539 aaaactctaaccctga 24665524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 24665961 - 24665857
Alignment:
Q  129 aactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtc 228  Q
    |||||||||  ||| ||||||||||  | ||| ||||||||||| ||||||||||||||||||| ||||  | |||||| || || |||| |||||| ||    
T  24665961 aactcttaccgtaattgaaagaatctagtagtgaaagtacttgggtgaacgttcaatgactaatgaaac--tatttatcgactaatcaagattacaactc 24665864  T
Q  229 tcaccct 235  Q
    |||||||    
T  24665863 tcaccct 24665857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 24665471 - 24665397
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||||| |  ||| |||||||| || ||| |||||||||||||||| |||||| |||||||||||    
T  24665471 aactcacaactcttaccccgactaaaagaatcttgcagtgaaagtacttggatgaatgttcaacgactaatcaaa 24665397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 24666486 - 24666376
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| ||||||| ||  ||||| ||| |||| | |||||||||||||||||||||| ||||||| |||||| ||  ||||| ||| || || |||||||    
T  24666486 aactcacaactctaaccttaactaaaaaaatcttagagtcaaagtacttggatgaacattcaatgtctaatccaa--tttttaatcgactaatcaagctt 24666389  T
Q  222 acaagtctcaccc 234  Q
    |||| || |||||    
T  24666388 acaactcccaccc 24666376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 4e-34; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 30405538 - 30405651
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  || ||||| || ||||||||||    
T  30405538 aactcacaactcttaccctaactgaaagaatcttggagtcaaagtacttggatgaacgttcaatgactaatcaaactattgttatcgactaaccaagctt 30405637  T
Q  222 acaagtctcaccct 235  Q
    |||| ||| |||||    
T  30405638 acaaatctaaccct 30405651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 34961944 - 34962057
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||  || ||||| || |||||| |||    
T  34961944 aactcacaactcttaccctaactgaaagaatcttggagtcaaagtactttgatgaacgttcaatgactaatcaaactcttgttatcgactaaccaaactt 34962043  T
Q  222 acaagtctcaccct 235  Q
    |||| |||||||||    
T  34962044 acaactctcaccct 34962057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 34961418 - 34961531
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| |||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||  || ||||| || ||||||||||    
T  34961418 aactcacaactcttaccctaactaaaagaatcttggaatcaaagtacttggatgaacgttcaatgactaatcaaactcttgttatcgactaaccaagctt 34961517  T
Q  222 acaagtctcaccct 235  Q
    |||  |||||||||    
T  34961518 acacctctcaccct 34961531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 639077 - 639183
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagt 227  Q
    |||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||| ||||||||||||  || ||||| || |||||||||||||| |    
T  639077 caactcttaccctaactgaaagaaacatggagtcagagtacttggatgaacgttcaacgactaatcaaactcttgttatcgactaaccaagcttacaact 639176  T
Q  228 ctcaccc 234  Q
     ||||||    
T  639177 atcaccc 639183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 639772 - 639866
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctcaccct 235  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||  || ||  |||||||||| |||||||||    
T  639772 ctaactgaaagaatcttggagtcaaagtacttggatgaacgttcaatgactaatcaaac--tttttattgactaattaagcttacaactctcaccct 639866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 7655556 - 7655443
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||| | ||| ||||||||||| |||||||||||||||||||||||||||| |||| |||||||||  || ||||| || ||||||||||    
T  7655556 aactcacaactcttgccctagctgaaagaatcttggagtcaaagtacttggatgaacgttcgatgagtaatcaaactcttgttatcgactaaccaagctt 7655457  T
Q  222 acaagtctcaccct 235  Q
    |||| ||| |||||    
T  7655456 acaactctaaccct 7655443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 30405730 - 30405799
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  30405730 caactcttaccctaactgaaagaatcttggaggcaaagtacttggatgaacgttcaatgactaatcaaac 30405799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 18345015 - 18345077
Alignment:
Q  13 agatatacatagtgctatatgacagttttgtggcgttgacaataggtcctgcattaaccttat 75  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  18345015 agatatacatagtgctatatgacagttttgtgtcgttgacagtaggtcctgcattaaccttat 18345077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 30405167 - 30405269
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| |||||| |||||||| |||||||||||||| |||||||||||||| |||||||||||   ||| ||||| || ||||||||||    
T  30405167 aactcacaactcttaccctaactaaaagaatcttggagtcaaagtacatggatgaacgttcattgactaatcaattttttgttatcgactaaccaagctt 30405266  T
Q  222 aca 224  Q
    |||    
T  30405267 aca 30405269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 29616537 - 29616650
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| |||||| |||||||| |||||||| ||||||||||||||||||||||||| ||||||||  || ||||| |  |||||| |||    
T  29616537 aactcacaactcttaccctaactaaaagaatcttggagtcagagtacttggatgaacgttcaatgaccaatcaaactcttgttatcgaataaccaaactt 29616636  T
Q  222 acaagtctcaccct 235  Q
    |||| ||| |||||    
T  29616637 acaaatctaaccct 29616650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 34961764 - 34961871
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagt 227  Q
    ||||| |||| |||||| |||||||| ||||||||||||||||||| ||| ||| |||||||||||||||  || ||||| || ||||| |||||||| |    
T  34961764 caactattaccctaactaaaagaatcttggagtcaaagtacttggaggaatgttaaatgactaatcaaactcttgttatcgactaaccacgcttacaact 34961863  T
Q  228 ctcaccct 235  Q
    ||||||||    
T  34961864 ctcaccct 34961871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 1578114 - 1578182
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    |||||||||| | ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||    
T  1578114 caactcttaccccaactgaaagaatcttgtagtcaaagtacttggatgaatgttcaatgactaatcaaa 1578182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 1578274 - 1578349
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||  | ||||||||||||| || |||||||||||||||||||| |||||||||||||||||||    
T  1578274 aactcacaactcttatcccaactgaaagaatcatgtagtcaaagtacttggatgaatgttcaatgactaatcaaac 1578349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 7655741 - 7655639
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||| | ||| ||||||||||| |||||| |||||||||||||||||||||| ||| |||||||| || ||||||| || || |||||||    
T  7655741 aactcacaactcttgccctagctgaaagaatcttggagtgaaagtacttggatgaacgttcactgagtaatcaaa-ctcttttatcgactaaacaagctt 7655643  T
Q  222 acaa 225  Q
    ||||    
T  7655642 acaa 7655639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 34962136 - 34962243
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagt 227  Q
    |||||||||| ||||| ||||||||   |||||||||||||||||||||||||| ||| |||||||||||  || ||||| |  |||||||||||||| |    
T  34962136 caactcttaccctaaccgaaagaatttgggagtcaaagtacttggatgaacgtttaattactaatcaaactcttgttatcaaataaccaagcttacaaat 34962235  T
Q  228 ctcaccct 235  Q
    || |||||    
T  34962236 ctaaccct 34962243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 7655882 - 7655796
Alignment:
Q  149 gaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctcaccct 235  Q
    ||||| ||||||||||||||||||||||||||||| ||| |||||||||  || ||||| || |||||||||||||| ||| |||||    
T  7655882 gaatcttggagtcaaagtacttggatgaacgttcactgagtaatcaaactcttgttatcgactaaccaagcttacaactctaaccct 7655796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 34961252 - 34961363
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| ||||||||||  | | |||||| ||| |||||||||||||||||||||||| ||| ||||||||||||||  | |||||| || ||||||||||    
T  34961252 aactcacaactcttaccattaatgaaagtatcttggagtcaaagtacttggatgaacattctatgactaatcaaac--tatttatcgactaaccaagctt 34961349  T
Q  222 acaagtctcaccct 235  Q
    |||| ||| |||||    
T  34961350 acaattctaaccct 34961363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 638739 - 638849
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| ||| |||||||||||||| |||||||||| ||||||||| |||||| |||| ||||||   | |||||| || || |||||||    
T  638739 aactcacaactcttaccctatctgaaagaatcgtgtagtcaaagtagttggatgaatgttcaacgactgatcaaa--atctttatcgactaatcaagctt 638836  T
Q  222 acaagtctcaccc 234  Q
    |||| ||||||||    
T  638837 acaactctcaccc 638849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 30401610 - 30401703
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    |||||||||| | ||||||||||||  ||||||||||||| ||||||||| ||||||| |||||||||||  || ||||| || ||||||||||    
T  30401610 caactcttaccccaactgaaagaatgttggagtcaaagtatttggatgaatgttcaatcactaatcaaactattgttatcgactaaccaagctt 30401703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 639264 - 639332
Alignment:
Q  129 aactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||||||| ||||||||||||||| || |||||||||||||| ||||| |||||| ||||||||||||    
T  639264 aactcttaccctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcaacgactaatcaaac 639332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 7656094 - 7656019
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||| | ||| ||||||||| | ||||||||||||||||||||||||||||| ||| |||||||||    
T  7656094 aactcacaactcttgccctagctgaaagaaccttggagtcaaagtacttggatgaacgttcactgagtaatcaaac 7656019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 29616166 - 29616269
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| |||||| |||||||| |||||||||||||| | ||||||||  ||||||||| ||||||  || ||||| |  ||||||||||    
T  29616166 aactcacaactcttaccctaactaaaagaatcttggagtcaaagtacatagatgaacgcacaatgactactcaaactcttgttatcgaataaccaagctt 29616265  T
Q  222 acaa 225  Q
    ||||    
T  29616266 acaa 29616269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 12600805 - 12600879
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| || |||||||  |||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||    
T  12600805 aactcacagctcttaccataactgaaagaatcttgtagtcaaagtacttgaatgaatgttcaatgactaatcaaa 12600879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 30405001 - 30405075
Alignment:
Q  123 actcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||| |||||||||| ||||||||||||||| ||||||||||||| |||||| || | || ||||||||||||||    
T  30405001 actcacaactcttaccctaactgaaagaatcatggagtcaaagtagttggatcaatgatcgatgactaatcaaac 30405075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 30405352 - 30405426
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||||  ||||||||||||||| |||||||||||||| |||||||| ||||| | ||||||||||    
T  30405352 aactcacaactcttagcctaactgaaagaatcttggagtcaaagtacctggatgaaggttcactaactaatcaaa 30405426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 34967756 - 34967814
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||||| |||||||||    
T  34967756 ctaactgaaagaatcttggagtcaaagtacttacatgaacgttcaatgaataatcaaac 34967814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 639429 - 639498
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||||||||| ||||||||||||||| || |||||||||||||| ||||| |||| | ||||||||||||    
T  639429 caactcttaccctaactgaaagaatcttgtagtcaaagtacttgaatgaatgttcgacgactaatcaaac 639498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 24036142 - 24036209
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||||||||| ||||||||||| || || || ||||||||||||||||| ||||||||||||||||||    
T  24036142 caactcttactataactgaaaga-tcttgtagacaaagtacttggatgaatgttcaatgactaatcaaa 24036209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 640106 - 640181
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| ||||||||||  ||| || ||||||| || |||||||||||||||| ||| |||||||||||||||||||    
T  640106 aactcacaactcttaccttaattggaagaatcttgaagtcaaagtacttggacgaatgttcaatgactaatcaaac 640181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 29616352 - 29616454
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||||| | ||| ||||||  |||||| |||||||||| | ||||| ||||||||||||||||| ||| ||||| |  ||||||||||    
T  29616352 aactcacaactcttactc-agctggaagaatattggagttaaagtacttgaacgaacgctcaatgactaatcaaacttttcttatcgaataaccaagctt 29616450  T
Q  222 acaa 225  Q
    ||||    
T  29616451 acaa 29616454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 30404813 - 30404915
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| ||||||||||||||| ||||| || |||||||||||||| | |||   ||||||||||| ||  ||||| || |||||| |||    
T  30404813 aactcacaactcttaccctaactgaaagaatcttggaggcagagtacttggatgaatgatcacatactaatcaaactttagttatcgacaaaccaaactt 30404912  T
Q  222 aca 224  Q
    |||    
T  30404913 aca 30404915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 1577786 - 1577861
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| ||||||||||| |||||||||||||| || ||| ||||| ||   ||||| |||||||||||||||||||    
T  1577786 aactcacaactcttactttaactgaaagaatcttgcagtgaaagtgctcaaatgaatgttcaatgactaatcaaac 1577861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 639589 - 639659
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaat 192  Q
    ||||| |||| ||||| ||||||||||||||| || ||| ||||||||| ||| || ||||||||||||||    
T  639589 aactcacaacgcttaccctaactgaaagaatcctgcagttaaagtactttgattaatgttcaatgactaat 639659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 2190933 - 2190859
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||| |  |||||||  ||| |||||||||||    
T  2190933 aactcgcaactcttaccctaacttaaagaatattggagtcaaagtacgttcatgaacggccaacgactaatcaaa 2190859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 7655388 - 7655314
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||| ||||| || |||||||| ||||||||||||||| |||| |||||||| | || |||||||    
T  7655388 aactcacaactcttgctctagcttaaagaatcttggagtcaaagtactcggataaacgttcactaacgaatcaaa 7655314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 34961609 - 34961663
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatc 193  Q
    |||||| |||||||| |||||| ||||||||||||| || |||||||||||||||    
T  34961609 ctaactaaaagaatcttggagtgaaagtacttggataaatgttcaatgactaatc 34961663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 2191800 - 2191733
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||||||||| ||| ||||||| || || || |||||||||||| |||| ||||||||||||||||||    
T  2191800 caactcttactataattgaaaga-tcttgtagacaaagtacttgggtgaatgttcaatgactaatcaaa 2191733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 34964700 - 34964740
Alignment:
Q  157 gagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  34964700 gagttaaagtacttggatgaacgttcactgactaatcaaac 34964740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 639939 - 640022
Alignment:
Q  141 aactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttaca 224  Q
    ||||||||||||| | ||| || |||||||||||||||| ||| | |||||||||||  |  ||||| || |||||||||||||    
T  639939 aactgaaagaatcctagagacagagtacttggatgaacgatcacttactaatcaaactctcgttatcgactaaccaagcttaca 640022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 24037080 - 24037154
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    |||||||||||||||| | |||| |||||||  |||||||||||||| |  |||||||  ||| |||||||||||    
T  24037080 aactcgcaactcttaccccaacttaaagaatattggagtcaaagtacgttcatgaacgaccaacgactaatcaaa 24037154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 1577949 - 1578017
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    |||||||| | || |||||||||||| || ||| ||||||||   ||||| ||||||||||||||||||    
T  1577949 caactctttccctcactgaaagaatcttgtagtgaaagtactcaaatgaatgttcaatgactaatcaaa 1578017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 2192119 - 2192071
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatga 187  Q
    ||||||||||||||  |||||||||| ||| || |||||||||||||||    
T  2192119 ctaactgaaagaatattggagtcaaactacctgcatgaacgttcaatga 2192071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 24035823 - 24035871
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatga 187  Q
    ||||||||||||||  |||||||||| ||| || |||||||||||||||    
T  24035823 ctaactgaaagaatattggagtcaaactacctgcatgaacgttcaatga 24035871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 67; Significance: 7e-30; HSPs: 10)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 5082 - 5193
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||  | |||||| || ||||||||||    
T  5082 aactcacaactcttaccctaactgaaagaatcttggagtcagagtacttggatgaacgttcaatgactaatcaaac--tatttatcgactaaccaagctt 5179  T
Q  222 acaagtctcaccct 235  Q
    |||| ||| |||||    
T  5180 acaactctaaccct 5193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 4903 - 4999
Alignment:
Q  129 aactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaa 225  Q
    |||| |||| ||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  4903 aacttttaccctaaccgaaagaatcatggagtcaaagtacttggatgaatgttcaatgactaatcaaacttttgttatccactaaccaagcttacaa 4999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 5266 - 5379
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| |||| |||||||||| |||||||| |||| ||||||||||||||||||||||||||||  ||| | ||| || ||||||||||    
T  5266 aactcacaactcttaccctaattgaaagaatcttggagtcagagtatttggatgaacgttcaatgactaatcaaatttttgtcatctactaaccaagctt 5365  T
Q  222 acaagtctcaccct 235  Q
    |||| | |||||||    
T  5366 acaactatcaccct 5379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 5452 - 5527
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||| ||||||||||||||| ||||| || |||||||||||||||| ||| | |||||||||||    
T  5452 aactcacaactcttaccctaactgaaagaatcttggagacagagtacttggatgaacgatcacttactaatcaaac 5527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 5793 - 5864
Alignment:
Q  126 cgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||||||||||| ||||||||||||||| | ||||||||||| |||||| || || ||||||||||||||||    
T  5793 cgcaactcttaccctaactgaaagaatcttagagtcaaagtatttggattaatgtgcaatgactaatcaaac 5864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 29139 - 29213
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||||| ||||||  |||||||  ||||||| |||| ||||||||||||||||||||||||||||    
T  29139 aactcacaactcttaccctaacttgaagaatctaggagtcagagtatttggatgaacgttcaatgactaatcaaa 29213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 4768 - 4841
Alignment:
Q  162 aaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctcaccct 235  Q
    |||||||||||| ||||||||||||||||||||||  ||| ||||| || |||||||||||||| | |||||||    
T  4768 aaagtacttggaagaacgttcaatgactaatcaaatttttgttatctactaaccaagcttacaactatcaccct 4841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 5638 - 5711
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaa 195  Q
    ||||| ||||||| || ||||||||||||||| ||||||||||||| |||||| || | || ||||||||||||    
T  5638 aactcacaactctcaccctaactgaaagaatcctggagtcaaagtagttggatcaatgatcgatgactaatcaa 5711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 28998 - 29066
Alignment:
Q  167 acttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctcaccct 235  Q
    |||||||||||||||||||||||||||||||  || ||||| || |||||| ||||||| ||| |||||    
T  28998 acttggatgaacgttcaatgactaatcaaactattgttatctactaaccaaccttacaaatctaaccct 29066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 5956 - 6030
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||||| |||||| ||||| || || ||| ||||||||||||| ||||||| |||||||| ||||    
T  5956 aactcacaactcttaccctaactcaaagattcttgcagtgaaagtacttggataaacgttcgatgactaaacaaa 6030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 11762997 - 11763098
Alignment:
Q  132 tcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctca 231  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||  |||||||| || || ||||||||||| |||||    
T  11762997 tcttactctaactgaaagaatcttggagtcaaagtagttggatgaacgttcaaggactaatcaaac--tttttatcaactaatcaagcttacaactctca 11763094  T
Q  232 ccct 235  Q
    ||||    
T  11763095 ccct 11763098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 49791216 - 49791290
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||  |||||||||||||||||    
T  49791216 aactcacaactcttactataactgaaagaatcttgtagtcaaagtacttggatgaatattcaatgactaatcaaa 49791290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 51857912 - 51857979
Alignment:
Q  130 actcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||||| ||||| |||||||||    
T  51857912 actcttaccctaactgaaataatcttggagtcaaagtacttggatgaacgttgaatgattaatcaaac 51857979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 51858091 - 51858166
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||| ||| ||||| ||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  51858091 aactcacaactcttaccctagctgaacgaatcttggagtgaaagtacttggatgaacgttcaacgactaatcaaac 51858166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 11762831 - 11762892
Alignment:
Q  132 tcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatc 193  Q
    |||||| ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  11762831 tcttaccctaactgaaagaatactggagtcaaagtacttggatgaacgttcattgactaatc 11762892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 11763163 - 11763228
Alignment:
Q  132 tcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||||| ||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||    
T  11763163 tcttaccctaactgaaagaatcttgcagtgaaagtacttggatgaacgttcaacgactaatcaaac 11763228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 11762643 - 11762713
Alignment:
Q  132 tcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaacctttt 202  Q
    ||||||| |||||||||||||| | ||||||||||| ||| |||||||||||| |||||||||||| ||||    
T  11762643 tcttactataactgaaagaatctttgagtcaaagtagttgaatgaacgttcaaggactaatcaaacatttt 11762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 11763505 - 11763579
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||||| |||| |||||||||| || |||||||||||||||||||| ||||||  ||||||||||    
T  11763505 aactcacaactcttaccctaagtgaaagaatcttgcagtcaaagtacttggatgaatgttcaacaactaatcaaa 11763579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 49791050 - 49791124
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| ||||||||||  |||| ||||||||| || ||||||||||||| |||||| ||||||||||||||||||    
T  49791050 aactcacaactcttaccttaaccgaaagaatcttgcagtcaaagtacttagatgaatgttcaatgactaatcaaa 49791124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 49791663 - 49791737
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||||| |||||| |||||||| | ||||||||||||| ||||||| |||||| |||||||||||    
T  49791663 aactcacaactcttaccctaactaaaagaatcctcgagtcaaagtactaggatgaatgttcaacgactaatcaaa 49791737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 49791868 - 49791936
Alignment:
Q  129 aactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||||||| |||  |||||||||| | |||| ||||||||||||||| | ||||||||||||||||||    
T  49791868 aactcttaccctacgtgaaagaatcttagagtgaaagtacttggatgaccattcaatgactaatcaaac 49791936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 11763671 - 11763741
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaat 192  Q
    ||||| ||||||||||  |||||||||||||| || ||| | |||||||||||||| ||| ||||||||||    
T  11763671 aactcacaactcttaccttaactgaaagaatcatgcagtaagagtacttggatgaatgttaaatgactaat 11763741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 49790867 - 49790939
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| ||||| |||| ||||||||||||||  || ||| ||||||||||   |||||||||||||||||||||||    
T  49790867 aactcacaacttttaccctaactgaaagaatattgtagtaaaagtacttg---gaacgttcaatgactaatcaaac 49790939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 11763339 - 11763413
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||||| ||||||||||||| | || ||||||||| ||||||| || |||  | |||||||||||    
T  11763339 aactcacaactcttaccctaactgaaagaaacttgcagtcaaagttcttggattaatgttttaagactaatcaaa 11763413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 35466851 - 35466955
Alignment:
Q  129 aactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtc 228  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||  |||||||| || || ||||||||||| ||    
T  35466851 aactcttaccctaactgaaagaatcctgcagtcaaagtacttggatgaatgttcaatgactaatcaaac--tttttatcgactaatcaagcttacaactc 35466948  T
Q  229 tcaccct 235  Q
    |||||||    
T  35466949 tcaccct 35466955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 35467010 - 35467084
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  35467010 aactcgcaactcttaccctaactgaaagaatcttgtagtcaaagtacttggatgaacgttcaatgaataatcaaa 35467084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 8948172 - 8948246
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||||| |||| |||||||||| || |||||||||||||||||||| ||||||||||||||||||    
T  8948172 aactcacaactcttaccctaattgaaagaatcttgtagtcaaagtacttggatgaatgttcaatgactaatcaaa 8948246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 13930406 - 13930509
Alignment:
Q  129 aactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtc 228  Q
    ||||||||| ||||||||||||||| ||||||||||||| || || ||| |||||||||||||||||||  | |||||| || || ||||||||||| ||    
T  13930406 aactcttaccctaactgaaagaatcttggagtcaaagtatttagacgaatgttcaatgactaatcaaac--tatttatcaactaatcaagcttacaactc 13930503  T
Q  229 tcaccc 234  Q
    ||||||    
T  13930504 tcaccc 13930509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 15738261 - 15738193
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    |||||||||| | ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||    
T  15738261 caactcttaccccaactgaaagaatcttgtagtcaaagtacttggatgaatgttcaatgactaatcaaa 15738193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 15738101 - 15738026
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||  | ||||||||||||| || |||||||||||||||||||| |||||||||||||||||||    
T  15738101 aactcacaactcttatcccaactgaaagaatcatgtagtcaaagtacttggatgaatgttcaatgactaatcaaac 15738026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 8947306 - 8947415
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| ||| ||||| ||||| |||||| ||||||||||||||||||||||| ||||||| ||||  | |||||| || || |||||||    
T  8947306 aactcacaactcttaccctatctgaacgaatcttggagtgaaagtacttggatgaacgttcaacgactaataaaac--tatttatcaactaatcaagctt 8947403  T
Q  222 acaagtctcacc 233  Q
    | || |||||||    
T  8947404 aaaactctcacc 8947415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 44213623 - 44213691
Alignment:
Q  129 aactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||||||| ||||||| ||||||| ||  ||||||||||||||||||||||||||||| |||||||||    
T  44213623 aactcttaccctaactggaagaatcttgaggtcaaagtacttggatgaacgttcaatgattaatcaaac 44213691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 8947146 - 8947213
Alignment:
Q  130 actcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||||||  ||||||||||||||| |||||| |||||||||||||||||||| ||||| |||||||||    
T  8947146 actcttatcctaactgaaagaatcttggagtaaaagtacttggatgaacgttaaatgattaatcaaac 8947213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 8947672 - 8947730
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  8947672 ctaactaaaagaatcttggagttaaagtacttggatgaacgttcaacgactaatcaaac 8947730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 13930263 - 13930328
Alignment:
Q  132 tcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||||| |||||||| ||||   |||||| ||||||||||||||||||||||||||||||||||||    
T  13930263 tcttaccctaactgacagaactttggagtgaaagtacttggatgaacgttcaatgactaatcaaac 13930328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 8948338 - 8948413
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||| ||||||||||||||  || | | |||||||||||||||| |||||||||| ||||||||    
T  8948338 aactcacaactcttaccctaactgaaagaatattgtattgaaagtacttggatgaatgttcaatgaccaatcaaac 8948413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 13910188 - 13910114
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| ||||||||||  ||||| |||||||| |||||||| |||| ||||||||||| ||| ||||||||||||    
T  13910188 aactcacaactcttaccttaacttaaagaatcttggagtcagagtaattggatgaacgatcactgactaatcaaa 13910114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 13914458 - 13914385
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| ||||||||||  ||||||||||| || || ||| |||||||||||||||| ||||||||||||||||||    
T  13914458 aactcacaactcttaccataactgaaaga-tcttgtagttaaagtacttggatgaatgttcaatgactaatcaaa 13914385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 35466679 - 35466753
Alignment:
Q  123 actcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||| |||||||||| |||||||||  || | || ||| |||||| |||||||||||||||||||||||||||||    
T  35466679 actcacaactcttaccctaactgaacaaaccttgtagtgaaagtatttggatgaacgttcaatgactaatcaaac 35466753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 13914827 - 13914755
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| ||||| |||| ||||||||||||||| || ||| ||||||||||   |||||||||||||||||||||||    
T  13914827 aactcacaacttttaccctaactgaaagaatcttgcagtaaaagtacttg---gaacgttcaatgactaatcaaac 13914755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 8947490 - 8947565
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaacc 198  Q
    ||||| |||||||||  |||||||||| |||| |||| | |||||||||| ||||||||||||||||||||| ||||    
T  8947490 aactcacaactcttatcctaactgaaaaaatcttggactgaaagtacttg-atgaacgttcaatgactaatccaacc 8947565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 194
Target Start/End: Complemental strand, 13914624 - 13914552
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatca 194  Q
    ||||| ||||||||||  |||| ||||||||| |||||||||||||||| | |||| ||||| ||||||||||    
T  13914624 aactcacaactcttaccttaaccgaaagaatcttggagtcaaagtacttaggtgaatgttcattgactaatca 13914552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 15738589 - 15738514
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| ||||||||||| |||||||||||||| || ||| ||||| ||   ||||| |||||||||||||||||||    
T  15738589 aactcacaactcttactttaactgaaagaatcttgcagtgaaagtgctcaaatgaatgttcaatgactaatcaaac 15738514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 13910372 - 13910298
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||||| |||||| |||||||  |||||||||||||| | ||||||||  ||| |||||||||||    
T  13910372 aactcacaactcttaccctaacttaaagaatattggagtcaaagtacgttgatgaacggccaacgactaatcaaa 13910298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 35467176 - 35467250
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||||  ||||||||||||||| || ||| ||||||||| |||||| ||||| ||| ||||||||    
T  35467176 aactcacaactcttatcctaactgaaagaatcttgcagtgaaagtacttagatgaaagttcattgaataatcaaa 35467250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 35467342 - 35467416
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||||| ||||||||||||||| |  ||| ||||||||| |||||| ||||| ||| ||||||||    
T  35467342 aactcacaactcttaccctaactgaaagaatcttacagtgaaagtacttagatgaaagttcattgaataatcaaa 35467416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 8947841 - 8947920
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttt 201  Q
    ||||| ||||||||||  |||||||||||||| |  ||||||||||||| |||||| ||| || ||||| ||||| ||||    
T  8947841 aactcacaactcttaccttaactgaaagaatcttatagtcaaagtactttgatgaatgtttaaagactagtcaaatcttt 8947920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 13914956 - 13914908
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatga 187  Q
    ||||||||||||||  |||||||||| ||| || |||||||||||||||    
T  13914956 ctaactgaaagaatattggagtcaaactacctgcatgaacgttcaatga 13914908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 15738426 - 15738358
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    |||||||| | || |||||||||||| || ||| ||||||||   ||||| ||||||||||||||||||    
T  15738426 caactctttccctcactgaaagaatcttgtagtgaaagtactcaaatgaatgttcaatgactaatcaaa 15738358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 17321336 - 17321304
Alignment:
Q  164 agtacttggatgaacgttcaatgactaatcaaa 196  Q
    |||||||||||||| ||||||||||||||||||    
T  17321336 agtacttggatgaatgttcaatgactaatcaaa 17321304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 13739988 - 13740063
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13739988 aactcacaactcttaccctaactgaaagaatcttggagtcaaagtacttggatgaacgttcaatgactaatcaaac 13740063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 13743278 - 13743363
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttaca 224  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  || ||||| || |||||||||||||    
T  13743278 ctaactgaaagaatcttggagtcaaagtacttggatgaacgttcactgactaatcaaactcttgttatcgactaaccaagcttaca 13743363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 47324103 - 47324177
Alignment:
Q  123 actcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||| |||||||||| |||||| |||||||| || ||| ||||||||||||||||||||||||||||||||||||    
T  47324103 actcacaactcttaccctaactcaaagaatcttgcagtgaaagtacttggatgaacgttcaatgactaatcaaac 47324177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 47338899 - 47338973
Alignment:
Q  123 actcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||| |||||||||| |||||| |||||||| || ||| ||||||||||||||||||||||||||||||||||||    
T  47338899 actcacaactcttaccctaactcaaagaatcttgcagtgaaagtacttggatgaacgttcaatgactaatcaaac 47338973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 43264775 - 43264869
Alignment:
Q  129 aactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaa 225  Q
    |||| |||| |||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||  | |||||| || ||||||||| ||||    
T  43264775 aacttttaccctaactaaaagaatcatggattcaaagtacttggatgaacgttcaatgactaatcaaac--tatttatcaactaaccaagctcacaa 43264869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 43265236 - 43265293
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  43265236 ctaactgaaagaatcttggagtcaaagtacctggatgaacgttcaatgactaatcaaa 43265293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 47324780 - 47324878
Alignment:
Q  134 ttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctcacc 233  Q
    |||| ||||| ||| ||||| |||||| ||||||||||||||||||||||||||||||||||||  | |||||| || |  |||||||||||||||||||    
T  47324780 ttaccctaaccgaatgaatcttggagtgaaagtacttggatgaacgttcaatgactaatcaaac--tctttatcgactagtcaagcttacaagtctcacc 47324877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 47325101 - 47325211
Alignment:
Q  123 actcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctta 222  Q
    |||| |||||||||| |||||| |||||||| || ||| ||||||||| ||||||||||||||||||||||||||  | |||||  || || ||||||||    
T  47325101 actcacaactcttaccctaactcaaagaatcttgcagtgaaagtacttagatgaacgttcaatgactaatcaaac--tctttattgactaatcaagctta 47325198  T
Q  223 caagtctcaccct 235  Q
    ||| |||||||||    
T  47325199 caactctcaccct 47325211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 47339576 - 47339674
Alignment:
Q  134 ttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctcacc 233  Q
    |||| ||||| ||| ||||| |||||| ||||||||||||||||||||||||||||||||||||  | |||||| || |  |||||||||||||||||||    
T  47339576 ttaccctaaccgaatgaatcttggagtgaaagtacttggatgaacgttcaatgactaatcaaac--tctttatcgactagtcaagcttacaagtctcacc 47339673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 47339897 - 47340007
Alignment:
Q  123 actcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctta 222  Q
    |||| |||||||||| |||||| |||||||| || ||| ||||||||| ||||||||||||||||||||||||||  | |||||  || || ||||||||    
T  47339897 actcacaactcttaccctaactcaaagaatcttgcagtgaaagtacttagatgaacgttcaatgactaatcaaac--tctttattgactaatcaagctta 47339994  T
Q  223 caagtctcaccct 235  Q
    ||| |||||||||    
T  47339995 caactctcaccct 47340007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 617550 - 617488
Alignment:
Q  13 agatatacatagtgctatatgacagttttgtggcgttgacaataggtcctgcattaaccttat 75  Q
    |||||||||||||||||||||||||||||||| | |||||| |||||||||||||| ||||||    
T  617550 agatatacatagtgctatatgacagttttgtgccattgacagtaggtcctgcattagccttat 617488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 13739826 - 13739904
Alignment:
Q  144 tgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttaca 224  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||||||  | |||||| || |||||||||||||    
T  13739826 tgaaagaatcttggagtcaatgtactcggatgaacgttcaatgactaatcaaac--tatttatcgactaaccaagcttaca 13739904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 43265743 - 43265808
Alignment:
Q  131 ctcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    |||||||  |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||    
T  43265743 ctcttaccataactgaaagaatcttgtagtcaaagtacttggatgaatgttcaatgactaatcaaa 43265808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 13743447 - 13743522
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||  ||||||||||||||| | || ||||||||| |||||||||||||||| |||||||||||    
T  13743447 aactcacaactcttaacctaactgaaagaatctttgaatcaaagtacctggatgaacgttcaataactaatcaaac 13743522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 43264622 - 43264685
Alignment:
Q  162 aaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaa 225  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||| || ||||||||||||||    
T  43264622 aaagtacttggatgaacgttcaatgactaatcaaatttttgttatctactaaccaagcttacaa 43264685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 13743101 - 13743188
Alignment:
Q  146 aaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctcaccct 235  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||| ||||  | |||||  || |||||||||||||| ||| |||||    
T  13743101 aaagaatcttggagtcaaagtactcggatgaacgttcaatgactaatgaaac--tatttattgactaaccaagcttacaactctaaccct 13743188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 15781173 - 15781247
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| ||||||||||  |||| ||||||||| |||||||||||||||| | |||| ||||||||||||||||||    
T  15781173 aactcacaactcttaccttaaccgaaagaatcttggagtcaaagtacttaggtgaatgttcaatgactaatcaaa 15781247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 43265065 - 43265131
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgac 188  Q
    ||||| |||||||||| ||||||||||||||| | |||||||| ||| |||||||||||||||||||    
T  43265065 aactcacaactcttaccctaactgaaagaatcttagagtcaaattacctggatgaacgttcaatgac 43265131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 43265900 - 43265974
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||| ||||||||||||||||||||  || | | |||||||||||||||| ||||||||||||||||||    
T  43265900 aactcacaacgcttactctaactgaaagaatattgtattgaaagtacttggatgaatgttcaatgactaatcaaa 43265974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 47324274 - 47324343
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||||||||| ||||||||||||||  |||||| |||||||||||||||| |||||| ||| ||||||||    
T  47324274 caactcttaccctaactgaaagaatattggagtgaaagtacttggatgaatgttcaacgaccaatcaaac 47324343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 47325283 - 47325336
Alignment:
Q  143 ctgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  47325283 ctgaaagaatcttgcagtcaaagtacttggatgaacgttcaatgaataatcaaa 47325336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 47339070 - 47339139
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||||||||| ||||||||||||||  |||||| |||||||||||||||| |||||| ||| ||||||||    
T  47339070 caactcttaccctaactgaaagaatattggagtgaaagtacttggatgaatgttcaacgaccaatcaaac 47339139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 47340079 - 47340132
Alignment:
Q  143 ctgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  47340079 ctgaaagaatcttgcagtcaaagtacttggatgaacgttcaatgaataatcaaa 47340132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 15780601 - 15780653
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgt 180  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  15780601 caactcttaccctaactgaaagaattttggagtcaaagtacttggatgaacgt 15780653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 13742898 - 13742973
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||  |||||| |||||| | |||||||||||||| |||||||| ||||| |||||||||||||    
T  13742898 aactcacaactcttaacctaactaaaagaaccttggagtcaaagtacctggatgaatgttcactgactaatcaaac 13742973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 15780821 - 15780879
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||||||||||||  |||||||||| ||| || |||||||||||||||||||||||||    
T  15780821 ctaactgaaagaatattggagtcaaactacctgcatgaacgttcaatgactaatcaaac 15780879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 15781339 - 15781412
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| ||||||||||  ||||||||||| || || ||||||||||| |||||||| ||||||||||||||||||    
T  15781339 aactcacaactcttaccataactgaaaga-tcttgtagtcaaagtacctggatgaatgttcaatgactaatcaaa 15781412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 43265568 - 43265642
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| ||||||||||  |||| ||||||||| || ||||||||||||| | |||| ||||||||||||||||||    
T  43265568 aactcacaactcttaccttaaccgaaagaatcttgtagtcaaagtacttaggtgaatgttcaatgactaatcaaa 43265642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 15780970 - 15781042
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||||||||| |||| ||||||||||||||| || ||| ||||||||||   ||| |||||||||||||||||||    
T  15780970 aactcgcaacttttaccctaactgaaagaatcttgcagtgaaagtacttg---gaatgttcaatgactaatcaaac 15781042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 43265385 - 43265457
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| ||||| |||| ||||||||||||||| || ||| ||||||||||   |||||||||||||||||||||||    
T  43265385 aactcacaacttttacgctaactgaaagaatcttgcagtgaaagtacttg---gaacgttcaatgactaatcaaac 43265457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 47324618 - 47324713
Alignment:
Q  140 taactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctcaccct 235  Q
    ||||| |||||||| || ||| |||||||||||||||||||| ||||||||| ||||   | |||||  || || ||||||||||| |||||||||    
T  47324618 taactcaaagaatcttgcagtgaaagtacttggatgaacgttgaatgactaaacaaaaactctttatagactaatcaagcttacaactctcaccct 47324713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 47339414 - 47339509
Alignment:
Q  140 taactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctcaccct 235  Q
    ||||| |||||||| || ||| |||||||||||||||||||| ||||||||| ||||   | |||||  || || ||||||||||| |||||||||    
T  47339414 taactcaaagaatcttgcagtgaaagtacttggatgaacgttgaatgactaaacaaaaactctttatagactaatcaagcttacaactctcaccct 47339509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 15780656 - 15780731
Alignment:
Q  160 tcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctcaccct 235  Q
    ||||||||||||||||| |||||||| |||||||||||  || ||||| || |||  ||||||||| ||| |||||    
T  15780656 tcaaagtacttggatgaccgttcaatcactaatcaaactattgttatcgactaactgagcttacaaatctaaccct 15780731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 47324434 - 47324505
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatc 193  Q
    ||||| |||||||||| |  ||| |||||||| || ||||||||||||||||| || ||| |||||||||||    
T  47324434 aactcacaactcttacccagactaaaagaatcatgtagtcaaagtacttggataaatgtttaatgactaatc 47324505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 47339230 - 47339301
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatc 193  Q
    ||||| |||||||||| |  ||| |||||||| || ||||||||||||||||| || ||| |||||||||||    
T  47339230 aactcacaactcttacccagactaaaagaatcatgtagtcaaagtacttggataaatgtttaatgactaatc 47339301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 47324934 - 47325002
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgacta 190  Q
    ||||| || |||||||  |||||||||||||| || ||||||| | |||||||||| |||||| |||||    
T  47324934 aactcacagctcttaccataactgaaagaatcttgcagtcaaattgcttggatgaatgttcaacgacta 47325002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 47339730 - 47339798
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgacta 190  Q
    ||||| || |||||||  |||||||||||||| || ||||||| | |||||||||| |||||| |||||    
T  47339730 aactcacagctcttaccataactgaaagaatcttgcagtcaaattgcttggatgaatgttcaacgacta 47339798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 15571659 - 15571584
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15571659 aactcacaactcttaccctaactgaaagaatcttggagtcaaagtacttggatgaacgttcaatgactaatcaaac 15571584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 18454471 - 18454396
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18454471 aactcacaactcttaccctaactgaaagaatcttggagtcaaagtacttggatgaacgttcaatgactaatcaaac 18454396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 27194730 - 27194792
Alignment:
Q  13 agatatacatagtgctatatgacagttttgtggcgttgacaataggtcctgcattaaccttat 75  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27194730 agatatacatagtgctatatgacagttttgtggcgttgacagtaggtcctgcattaaccttat 27194792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 27844544 - 27844606
Alignment:
Q  13 agatatacatagtgctatatgacagttttgtggcgttgacaataggtcctgcattaaccttat 75  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  27844544 agatatacatagtgctatatgacagttttgtgacgttgacagtaggtcctgcattaaccttat 27844606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 18454279 - 18454210
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||    
T  18454279 caactcttaccctaactgaaagaatcttggagtgaaagtacttggatgaatgttcaacgactaatcaaac 18454210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 18453287 - 18453213
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||||| |||| ||||| |||| || |||||||||||||||||||||||||||||| ||||||||    
T  18453287 aactcacaactcttaccctaattgaaataatcttgcagtcaaagtacttggatgaacgttcaatgaataatcaaa 18453213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 15571821 - 15571743
Alignment:
Q  144 tgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttaca 224  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||||||  | |||||| || |||||||||||||    
T  15571821 tgaaagaatcttggagtcaatgtactcggatgaacgttcaatgactaatcaaac--tatttatcgactaaccaagcttaca 15571743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 18453444 - 18453342
Alignment:
Q  131 ctcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctc 230  Q
    ||||||| |||||| |||||||| ||  || ||||||||||||||||||||||||||||||||||||  |  ||||| || || ||||||||||| ||||    
T  18453444 ctcttaccctaactcaaagaatcttgcggtgaaagtacttggatgaacgttcaatgactaatcaaac--tccttatcgactaatcaagcttacaactctc 18453347  T
Q  231 accct 235  Q
    |||||    
T  18453346 accct 18453342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 18454636 - 18454526
Alignment:
Q  123 actcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctta 222  Q
    |||| |||||||||| |||||| |||||||  |  ||| ||||||||||||||||||||||||||||| ||||||  | |||||| || || ||||||||    
T  18454636 actcacaactcttaccctaactcaaagaatgttacagtgaaagtacttggatgaacgttcaatgactagtcaaac--tctttatcgactaatcaagctta 18454539  T
Q  223 caagtctcaccct 235  Q
    ||| |||||||||    
T  18454538 caactctcaccct 18454526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 12522884 - 12522779
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagt 227  Q
    |||||||||| ||||||||||||||  |||||| ||||||||| |||||||||||||| ||||||  |||  | |||||| || || ||||||||||| |    
T  12522884 caactcttaccctaactgaaagaattttggagtgaaagtacttagatgaacgttcaattactaattcaac--tatttatcgactaatcaagcttacaact 12522787  T
Q  228 ctcaccct 235  Q
    ||||||||    
T  12522786 ctcaccct 12522779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 12523026 - 12522961
Alignment:
Q  132 tcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    |||||| |||||||| ||||   |||||| ||||||||||||||||||||||||||||||||||||    
T  12523026 tcttaccctaactgacagaactttggagtgaaagtacttggatgaacgttcaatgactaatcaaac 12522961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 19816938 - 19816891
Alignment:
Q  28 tatatgacagttttgtggcgttgacaataggtcctgcattaaccttat 75  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  19816938 tatatgatagttttgtggcgttgacagtaggtcctgcattaaccttat 19816891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 39441017 - 39440970
Alignment:
Q  28 tatatgacagttttgtggcgttgacaataggtcctgcattaaccttat 75  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  39441017 tatatgacagttttgtggcattgacagtaggtcctgcattaaccttat 39440970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 14493424 - 14493350
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||||| |||||| |||||||| | |||||||| |||| ||||||| |||||| |||||||||||    
T  14493424 aactcacaactcttaccctaactaaaagaatccttgagtcaaaatactaggatgaatgttcaacgactaatcaaa 14493350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 18453773 - 18453675
Alignment:
Q  134 ttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctcacc 233  Q
    |||| ||||| ||| ||||| || ||| |||||||||||||||| |||||||||||||||||||  | |||||| || |  ||||||||||| |||||||    
T  18453773 ttaccctaaccgaatgaatcttgcagtgaaagtacttggatgaaagttcaatgactaatcaaac--tctttatcgactagtcaagcttacaactctcacc 18453676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 18454113 - 18454048
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatc 193  Q
    |||||||||| | ||||||||||||  || |||||||||||||||||||| ||| |||||||||||    
T  18454113 caactcttacccaaactgaaagaataatgtagtcaaagtacttggatgaatgtttaatgactaatc 18454048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 14493219 - 14493151
Alignment:
Q  129 aactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||||||| |||  |||||||||| | |||| ||||||||||||||| | ||||||||||||||||||    
T  14493219 aactcttaccctacgtgaaagaatcttagagtgaaagtacttggatgaccattcaatgactaatcaaac 14493151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 14493354 - 14493281
Alignment:
Q  160 tcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctcaccct 235  Q
    ||||||||||| |||||| ||||||||||||||| ||  ||||| | | || || ||||||||||| |||||||||    
T  14493354 tcaaagtacttagatgaatgttcaatgactaatccaa--tttttcaccgactaatcaagcttacaactctcaccct 14493281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 124512 - 124437
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  124512 aactcacaactcttaccctaactgaaataatcttggagtcaaagtacttggatgaacgttcaatgactaatcaaac 124437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 23484343 - 23484456
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| ||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||||  || ||||| |  ||||||||||    
T  23484343 aactcacaactcttaccctaactgaaagaatcttggagtcagattacttggatgaacgctcaatgactaatcaaactcttgttatcaaataaccaagctt 23484442  T
Q  222 acaagtctcaccct 235  Q
    |||| ||| |||||    
T  23484443 acaaatctaaccct 23484456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 23484529 - 23484642
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| ||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||||  || ||||| |  ||||||||||    
T  23484529 aactcacaactcttaccctaactgaaagaatcttggagtcagattacttggatgaacgctcaatgactaatcaaactcttgttatcaaataaccaagctt 23484628  T
Q  222 acaagtctcaccct 235  Q
    |||| ||| |||||    
T  23484629 acaaatctaaccct 23484642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 23483971 - 23484074
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| || | | |||||||| || ||||||||||||||||||||||||||||||||||||||||  || ||||| || ||||||||||    
T  23483971 aactcacaactcttacccttattaaaagaatcttgtagtcaaagtacttggatgaacgttcaatgactaatcaaactcttgttatcgactaaccaagctt 23484070  T
Q  222 acaa 225  Q
    ||||    
T  23484071 acaa 23484074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 23484157 - 23484232
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| ||||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23484157 aactcacaactcttaccataattgaaagaatcttggagtcaaagtacttggatgaacgttcaatgactaatcaaac 23484232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 34907589 - 34907663
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  34907589 aactcacaactcttaccctaactgaaaga-tcttggagtcaaagtacttggatgaacgttcaatgactaatcaaac 34907663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 23484715 - 23484817
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| ||||||||||||||| ||||| ||||||||||||||||||| ||| | |||||||||||  || ||||| || ||||||||||    
T  23484715 aactcacaactcttaccctaactgaaagaatcttggagacaaagtacttggatgaacgatcacttactaatcaaactcttgttatcgactaaccaagctt 23484814  T
Q  222 aca 224  Q
    |||    
T  23484815 aca 23484817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 32059403 - 32059328
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| ||||||||||  |||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  32059403 aactcacaactcttaccttaactgaaagaatcttggagtcaaaatacttagatgaacgttcaatgactaatcaaac 32059328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 124696 - 124585
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||||| ||||||||||||| | |||||||||||||| | |||||||||||| ||||||||||||   | |||||| || ||||||||||    
T  124696 aactcacaactcttaccctaactgaaagaaccctggagtcaaagtacctcgatgaacgttcactgactaatcaaa--atatttatcgactaaccaagctt 124599  T
Q  222 acaagtctcaccct 235  Q
    |||| | |||||||    
T  124598 acaactttcaccct 124585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 32058812 - 32058701
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| ||||||| || | ||||||||||||| |||||| ||||||||| |||||||||||||| ||||||| |||  | |||||| || ||||||||||    
T  32058812 aactcacaactctaaccccaactgaaagaatcttggagtaaaagtacttagatgaacgttcaattactaatccaac--tatttatcgactaaccaagctt 32058715  T
Q  222 acaagtctcaccct 235  Q
    |||| |||||||||    
T  32058714 acaactctcaccct 32058701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 124882 - 124769
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||| | ||||| ||||||||| ||||||||| ||||||||||||||| ||| |||||||||||||  || ||||| || || |||||||    
T  124882 aactcacaactcttgccctaacagaaagaatcttggagtcaatgtacttggatgaacgatcactgactaatcaaactcttgttatcgactaatcaagctt 124783  T
Q  222 acaagtctcaccct 235  Q
    |||| | |||||||    
T  124782 acaactatcaccct 124769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 34907444 - 34907534
Alignment:
Q  143 ctgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctcaccct 235  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||  | |||||| || || ||||||||||| ||| |||||    
T  34907444 ctgaaagaatcttggagtcaaagtacttggatgaatgttcaatgactaatgaaac--tatttatcgactaatcaagcttacaactctaaccct 34907534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 23484901 - 23484976
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||| || |||  ||||||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  23484901 aactcacaactcttaccctcactagaagaatcttggagtcaaagtacttggatgaacgttcaatgaataatgaaac 23484976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 34907244 - 34907319
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| |||||||||  ||||||||||||||| |||||||||||||| |||||||| ||||| |||||||| ||||    
T  34907244 aactcacaactcttaacctaactgaaagaatcttggagtcaaagtacctggatgaatgttcactgactaataaaac 34907319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 32058971 - 32058872
Alignment:
Q  129 aactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtc 228  Q
    ||||||||| ||||||||||||||| | |||||||||||||| ||  || |||||||||||||||||||  | |||||| || || ||||||||||| ||    
T  32058971 aactcttaccctaactgaaagaatctttgagtcaaagtacttagacaaatgttcaatgactaatcaaac--tatttatcgactaatcaagcttacaactc 32058874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 23474078 - 23474131
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaat 192  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  23474078 ctaactggaagaatcttggagtcaaagtatttggatgaacgttcaatgactaat 23474131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 32059134 - 32059033
Alignment:
Q  132 tcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctca 231  Q
    |||||| |||||||| ||||   |||||| ||||||||||||||||||||||||||||||||||  | | |||||| || || ||| ||||||| |||||    
T  32059134 tcttaccctaactgacagaactttggagtgaaagtacttggatgaacgttcaatgactaatcaa--cctctttatcgactaatcaaacttacaactctca 32059037  T
Q  232 ccct 235  Q
    ||||    
T  32059036 ccct 32059033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 32059311 - 32059239
Alignment:
Q  121 gaactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatc 193  Q
    |||||| |||||||||| ||||||||||||||| |||||| |||||||||  || |||||| |||||||||||    
T  32059311 gaactcacaactcttaccctaactgaaagaatcctggagtgaaagtacttatataaacgtttaatgactaatc 32059239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 124115 - 124048
Alignment:
Q  129 aactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||||||| || |||||||||||| || ||| |||||||||||||||| |||||| |||||||||||    
T  124115 aactcttaccctgactgaaagaatcttgcagtgaaagtacttggatgaatgttcaacgactaatcaaa 124048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 23480079 - 23480154
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||| ||||| |||| || |||  ||||||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  23480079 aactcacaacttttacccttactagaagaatcttggagtcaaagtacttggatgaacgttcaatgaataatgaaac 23480154  T

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Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 23483812 - 23483875
Alignment:
Q  129 aactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaat 192  Q
    ||||||||| |||||| |||||||| || ||| |||||||||||||||| ||||||||||||||    
T  23483812 aactcttaccctaactaaaagaatcttgtagttaaagtacttggatgaaagttcaatgactaat 23483875  T

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Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 32059569 - 32059500
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaa 191  Q
    ||||| ||| |||||| ||||||||||||||  |||||||||||||| | |||||||||| |||||||||    
T  32059569 aactcacaaatcttaccctaactgaaagaatattggagtcaaagtacctagatgaacgttaaatgactaa 32059500  T

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Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 16535578 - 16535511
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||||||||  ||||||||||| || || || ||||||||||||||||| ||||||||||||||||||    
T  16535578 caactcttaccataactgaaaga-tcttgtagacaaagtacttggatgaatgttcaatgactaatcaaa 16535511  T

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Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 23479932 - 23479995
Alignment:
Q  161 caaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttaca 224  Q
    ||||||||||||||||||| ||| | |||||||||||  || ||||| || |||||||||||||    
T  23479932 caaagtacttggatgaacgatcacttactaatcaaactcttgttatcgactaaccaagcttaca 23479995  T

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Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 16535072 - 16534998
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    |||||||||||||||| |||||| |||||||  | |||||||||||| |  |||||||  ||| |||||||||||    
T  16535072 aactcgcaactcttaccctaacttaaagaatattagagtcaaagtacgttcatgaacggccaacgactaatcaaa 16534998  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 9873491 - 9873523
Alignment:
Q  164 agtacttggatgaacgttcaatgactaatcaaa 196  Q
    |||||||||||||| ||||||||||||||||||    
T  9873491 agtacttggatgaatgttcaatgactaatcaaa 9873523  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 16535897 - 16535849
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatga 187  Q
    ||||||||||||||  |||||||||| ||| || |||||||||||||||    
T  16535897 ctaactgaaagaatattggagtcaaactacctgcatgaacgttcaatga 16535849  T

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Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 11235117 - 11235021
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagcttacaagtctcaccct 235  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||  || ||||| |  |||||||||||||| ||| |||||    
T  11235117 ctaactgaaagaatcttggagtcaaagtactttgatgaacgttcaatgaataatcaaactcttgttatcgaataaccaagcttacaaatctaaccct 11235021  T

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Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 11234798 - 11234724
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| |||||||||| ||||||||||||||| || |||||||||||||||||||| |||||||||| |||||||    
T  11234798 aactcacaactcttaccctaactgaaagaatcatgtagtcaaagtacttggatgaatgttcaatgaccaatcaaa 11234724  T

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Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 11234966 - 11234853
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaaccttttttatccaccaaccaagctt 221  Q
    ||||| |||||||| | ||| |||||| |||| ||||||||||||| ||| |||||||||||||||| ||||||||  || ||||| |  ||||||||||    
T  11234966 aactcacaactctttccctagctgaaataatcttggagtcaaagtatttgaatgaacgttcaatgaccaatcaaactcttgttatcgaataaccaagctt 11234867  T
Q  222 acaagtctcaccct 235  Q
    |||| ||| |||||    
T  11234866 acaaatctaaccct 11234853  T

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Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 11234626 - 11234558
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    |||||||||| | ||||||||||||| |  ||||||| |||||||||||| ||||||||||||||||||    
T  11234626 caactcttaccccaactgaaagaatcttatagtcaaaatacttggatgaatgttcaatgactaatcaaa 11234558  T

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Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 11235300 - 11235236
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatg 186  Q
    ||||| |||| ||||| ||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  11235300 aactcacaacgcttaccctaactgaaagaatcttggagtcaaagtactttgatgaatgttcaatg 11235236  T

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Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 22259632 - 22259565
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||||||||| ||||||||||| || || || ||||||||||||||||| ||||||||||||||||||    
T  22259632 caactcttactataactgaaaga-tcttgtagacaaagtacttggatgaatgttcaatgactaatcaaa 22259565  T

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Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 14190748 - 14190701
Alignment:
Q  28 tatatgacagttttgtggcgttgacaataggtcctgcattaaccttat 75  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  14190748 tatatgacagttttgtggcattgacagtaggtcttgcattaaccttat 14190701  T

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Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 22256655 - 22256581
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||| |  |||||||  ||| |||||||||||    
T  22256655 aactcgcaactcttaccctaacttaaagaatattggagtcaaagtacgttcatgaacggccaacgactaatcaaa 22256581  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 192
Target Start/End: Complemental strand, 11235430 - 11235396
Alignment:
Q  158 agtcaaagtacttggatgaacgttcaatgactaat 192  Q
    |||||||||||||||||||| ||||||||||||||    
T  11235430 agtcaaagtacttggatgaatgttcaatgactaat 11235396  T

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Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 22259951 - 22259903
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatga 187  Q
    ||||||||||||||  |||||||||| ||| || |||||||||||||||    
T  22259951 ctaactgaaagaatattggagtcaaactacctgcatgaacgttcaatga 22259903  T

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Target: scaffold0031 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 84026 - 84084
Alignment:
Q  139 ctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaac 197  Q
    ||||||||||||||  |||||||||| ||| || |||||||||||||||||||||||||    
T  84026 ctaactgaaagaatattggagtcaaactacctgcatgaacgttcaatgactaatcaaac 84084  T

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Target: scaffold0031; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 84365 - 84432
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||| ||||| ||||||||||| || || || ||||||||||||||||| ||||||||||||||||||    
T  84365 caacttttactataactgaaaga-tcttgtagacaaagtacttggatgaatgttcaatgactaatcaaa 84432  T

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Target: scaffold0031; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 82285 - 82211
Alignment:
Q  122 aactcgcaactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    |||||||||||||||| |||||| |||||||  |||||||| ||||| |  |||||||  ||| |||||||||||    
T  82285 aactcgcaactcttaccctaacttaaagaatattggagtcacagtacgttcatgaacggccaacgactaatcaaa 82211  T

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Target: scaffold0268 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 6056 - 5989
Alignment:
Q  128 caactcttactctaactgaaagaatcgtggagtcaaagtacttggatgaacgttcaatgactaatcaaa 196  Q
    ||||||||||  ||||||||||| || || || || |||||||||||||| ||||||||||||||||||    
T  6056 caactcttaccataactgaaaga-tcttgtagacagagtacttggatgaatgttcaatgactaatcaaa 5989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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