View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6869A_low_62 (Length: 269)
Name: NF6869A_low_62
Description: NF6869A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6869A_low_62 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 23 - 269
Target Start/End: Complemental strand, 36549326 - 36549080
Alignment:
| Q |
23 |
cactcaatagaaaagtcacgagtttctggctgctccacttcaatagacacttcatttaacgcagaaggagctgcttggctagaatttctcttaggcttct |
122 |
Q |
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| T |
36549326 |
cactcaatagaaaagtcacgagtttctggctgctccacttcaatagacacttcatttaacgcagaaggagctgcttggctagaatttctcttaggcttct |
36549227 |
T |
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| Q |
123 |
tataaagttgagataatgcttgaacaatgttcctcattgaaggtcgggttttggagactcccttgacgcatttgagtgcaagtgaagccatgtcattaag |
222 |
Q |
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| T |
36549226 |
tataaagttgagataatgcttgaacaatgttcctcattgaaggtcgggttttggagactccattgacgcatttgagtgcaagtgaagccatgtcattaag |
36549127 |
T |
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| Q |
223 |
cttatccacatcatagtttccattcagttacggatctacaatttctt |
269 |
Q |
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| T |
36549126 |
cttatgcacatcatagtttccattcagttgcggatctacaatttctt |
36549080 |
T |
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