View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6870A_low_36 (Length: 299)

Name: NF6870A_low_36
Description: NF6870A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6870A_low_36
NF6870A_low_36
[»] chr7 (63 HSPs)
chr7 (1-279)||(39123803-39124081)
chr7 (66-230)||(40463855-40464013)
chr7 (67-228)||(47716438-47716596)
chr7 (66-229)||(42805502-42805662)
chr7 (66-230)||(21172007-21172164)
chr7 (66-229)||(43557450-43557611)
chr7 (66-229)||(32758239-32758395)
chr7 (70-229)||(42391099-42391251)
chr7 (66-228)||(10693073-10693228)
chr7 (66-217)||(2541030-2541177)
chr7 (55-229)||(19265782-19265949)
chr7 (66-216)||(33871922-33872066)
chr7 (66-217)||(22698978-22699127)
chr7 (66-229)||(27629612-27629770)
chr7 (66-229)||(42798647-42798805)
chr7 (66-229)||(34626207-34626364)
chr7 (66-228)||(48735122-48735278)
chr7 (66-227)||(11617589-11617745)
chr7 (140-229)||(27889315-27889402)
chr7 (55-209)||(13805069-13805217)
chr7 (55-209)||(28362164-28362313)
chr7 (94-229)||(7879644-7879774)
chr7 (66-190)||(46354172-46354293)
chr7 (55-213)||(3469190-3469347)
chr7 (66-227)||(29907395-29907552)
chr7 (94-215)||(18512466-18512581)
chr7 (66-217)||(35334827-35334971)
chr7 (66-227)||(16341256-16341413)
chr7 (74-227)||(18747472-18747621)
chr7 (66-229)||(19426889-19427046)
chr7 (66-217)||(47077866-47078010)
chr7 (55-228)||(23419674-23419842)
chr7 (71-229)||(32233134-32233286)
chr7 (141-216)||(45018935-45019012)
chr7 (119-208)||(38604558-38604641)
chr7 (68-208)||(28078152-28078286)
chr7 (66-217)||(14732832-14732979)
chr7 (66-207)||(19266428-19266564)
chr7 (66-216)||(42476851-42476994)
chr7 (66-139)||(42495919-42495992)
chr7 (165-229)||(13792149-13792213)
chr7 (141-217)||(21566485-21566560)
chr7 (143-230)||(31591107-31591192)
chr7 (147-203)||(33500569-33500625)
chr7 (119-230)||(35787267-35787372)
chr7 (143-228)||(23231609-23231692)
chr7 (66-198)||(14099036-14099163)
chr7 (66-198)||(14409053-14409180)
chr7 (66-139)||(18327012-18327085)
chr7 (66-130)||(7193063-7193127)
chr7 (55-203)||(7644923-7645066)
chr7 (67-227)||(11741774-11741927)
chr7 (55-210)||(48123502-48123652)
chr7 (79-217)||(38262207-38262340)
chr7 (66-228)||(6736868-6737022)
chr7 (94-208)||(35203445-35203556)
chr7 (165-198)||(1408529-1408562)
chr7 (185-230)||(25434112-25434157)
chr7 (66-181)||(5180202-5180314)
chr7 (177-216)||(42495874-42495913)
chr7 (66-132)||(7794597-7794663)
chr7 (66-139)||(44123705-44123778)
chr7 (181-229)||(36602535-36602583)
[»] chr2 (61 HSPs)
chr2 (55-228)||(10543664-10543835)
chr2 (66-229)||(24200622-24200782)
chr2 (66-228)||(14530296-14530455)
chr2 (61-232)||(5841001-5841169)
chr2 (66-230)||(8455314-8455473)
chr2 (66-231)||(9671158-9671317)
chr2 (66-197)||(12023950-12024075)
chr2 (66-229)||(25249737-25249894)
chr2 (66-229)||(17896237-17896396)
chr2 (68-230)||(21779259-21779414)
chr2 (66-229)||(21377073-21377230)
chr2 (79-229)||(14444720-14444864)
chr2 (79-229)||(10546153-10546299)
chr2 (66-216)||(7214512-7214659)
chr2 (66-229)||(17667980-17668138)
chr2 (66-228)||(25079717-25079875)
chr2 (66-228)||(23397744-23397899)
chr2 (66-230)||(11514414-11514572)
chr2 (104-229)||(36871509-36871627)
chr2 (66-228)||(14544041-14544201)
chr2 (66-229)||(17623542-17623700)
chr2 (66-197)||(22371035-22371158)
chr2 (55-225)||(4516354-4516519)
chr2 (55-230)||(44643489-44643660)
chr2 (155-230)||(23488545-23488620)
chr2 (66-208)||(99285-99420)
chr2 (66-208)||(31158459-31158598)
chr2 (143-228)||(40762234-40762317)
chr2 (55-228)||(17380238-17380404)
chr2 (66-166)||(29419945-29420046)
chr2 (66-191)||(5450263-5450384)
chr2 (66-217)||(24859999-24860143)
chr2 (73-217)||(25641487-25641625)
chr2 (167-227)||(40579750-40579810)
chr2 (77-216)||(19614981-19615116)
chr2 (66-229)||(27573599-27573756)
chr2 (55-209)||(32781307-32781456)
chr2 (66-230)||(39914304-39914463)
chr2 (66-225)||(45235820-45235975)
chr2 (143-229)||(15296405-15296490)
chr2 (66-209)||(33795263-33795401)
chr2 (168-230)||(34080176-34080238)
chr2 (168-214)||(34766330-34766376)
chr2 (68-216)||(19977726-19977869)
chr2 (143-215)||(24890463-24890533)
chr2 (143-204)||(44449407-44449467)
chr2 (66-139)||(44604832-44604905)
chr2 (148-208)||(19185763-19185823)
chr2 (173-216)||(8575975-8576018)
chr2 (167-226)||(41409936-41409995)
chr2 (174-228)||(3633708-3633762)
chr2 (180-230)||(22371199-22371249)
chr2 (143-228)||(25632561-25632644)
chr2 (167-208)||(24059016-24059057)
chr2 (66-130)||(17705473-17705537)
chr2 (165-217)||(26684631-26684683)
chr2 (180-217)||(124925-124962)
chr2 (66-190)||(23145736-23145855)
chr2 (66-190)||(23557526-23557645)
chr2 (181-229)||(760066-760114)
chr2 (181-229)||(23052964-23053012)
[»] chr3 (62 HSPs)
chr3 (67-230)||(13628788-13628948)
chr3 (66-231)||(29366717-29366879)
chr3 (66-229)||(26869707-26869864)
chr3 (66-208)||(46421055-46421194)
chr3 (66-229)||(13730601-13730761)
chr3 (66-208)||(8247707-8247846)
chr3 (55-227)||(22609755-22609921)
chr3 (66-229)||(40272811-40272969)
chr3 (66-229)||(34420642-34420801)
chr3 (67-229)||(5173718-5173876)
chr3 (66-230)||(16735441-16735599)
chr3 (66-228)||(39203516-39203671)
chr3 (66-227)||(22122918-22123072)
chr3 (74-229)||(516417-516570)
chr3 (55-226)||(26573116-26573282)
chr3 (66-229)||(1217090-1217246)
chr3 (94-216)||(10795435-10795554)
chr3 (66-229)||(53996564-53996723)
chr3 (66-229)||(25944469-25944628)
chr3 (143-228)||(45786214-45786299)
chr3 (66-218)||(6411832-6411978)
chr3 (143-229)||(54484765-54484849)
chr3 (66-208)||(9607203-9607342)
chr3 (143-226)||(353351-353434)
chr3 (102-217)||(14986993-14987105)
chr3 (143-229)||(34771363-34771447)
chr3 (66-229)||(52926218-52926367)
chr3 (66-157)||(10870021-10870108)
chr3 (68-209)||(30928166-30928302)
chr3 (77-227)||(45139479-45139624)
chr3 (143-229)||(49013472-49013558)
chr3 (95-228)||(31592878-31593004)
chr3 (66-217)||(7696903-7697042)
chr3 (143-229)||(15797294-15797378)
chr3 (145-231)||(25517167-25517251)
chr3 (66-231)||(12914032-12914192)
chr3 (77-208)||(33926094-33926220)
chr3 (119-197)||(47624095-47624167)
chr3 (143-229)||(54374344-54374429)
chr3 (148-217)||(829453-829521)
chr3 (165-229)||(24851300-24851364)
chr3 (55-217)||(45948849-45949009)
chr3 (55-164)||(45620890-45620997)
chr3 (168-230)||(30452892-30452954)
chr3 (173-230)||(10484614-10484671)
chr3 (164-229)||(44403554-44403619)
chr3 (147-224)||(55401254-55401330)
chr3 (69-215)||(7942993-7943134)
chr3 (73-207)||(12525414-12525543)
chr3 (164-230)||(40968611-40968677)
chr3 (66-139)||(53062038-53062112)
chr3 (66-178)||(4495714-4495821)
chr3 (180-229)||(47624208-47624257)
chr3 (168-229)||(50624952-50625013)
chr3 (175-230)||(45416932-45416986)
chr3 (143-208)||(9276338-9276400)
chr3 (165-207)||(46169988-46170030)
chr3 (185-231)||(54032568-54032614)
chr3 (55-132)||(35417905-35417982)
chr3 (185-229)||(4495675-4495719)
chr3 (165-225)||(35417998-35418058)
chr3 (185-229)||(43956471-43956515)
[»] chr5 (59 HSPs)
chr5 (66-230)||(38879559-38879720)
chr5 (66-229)||(43334180-43334340)
chr5 (66-208)||(27328730-27328869)
chr5 (66-230)||(41014297-41014455)
chr5 (66-230)||(4619102-4619263)
chr5 (66-229)||(24448868-24449026)
chr5 (75-231)||(32703411-32703560)
chr5 (66-229)||(8169983-8170139)
chr5 (55-229)||(19142942-19143110)
chr5 (66-229)||(35710291-35710447)
chr5 (148-228)||(12575660-12575739)
chr5 (55-217)||(43574564-43574730)
chr5 (97-228)||(13801767-13801895)
chr5 (55-217)||(39301090-39301247)
chr5 (66-214)||(2838756-2838899)
chr5 (119-228)||(7097760-7097863)
chr5 (165-230)||(16957386-16957451)
chr5 (157-217)||(25622524-25622584)
chr5 (66-230)||(208925-209084)
chr5 (143-230)||(29334447-29334533)
chr5 (63-230)||(22861667-22861826)
chr5 (155-227)||(12006329-12006401)
chr5 (143-227)||(20135656-20135740)
chr5 (66-208)||(22600432-22600569)
chr5 (168-230)||(3771414-3771476)
chr5 (103-217)||(7368413-7368520)
chr5 (143-229)||(12477119-12477204)
chr5 (143-228)||(34154814-34154897)
chr5 (155-208)||(10306494-10306546)
chr5 (164-225)||(21784335-21784396)
chr5 (66-131)||(37024646-37024711)
chr5 (66-228)||(1565409-1565566)
chr5 (143-217)||(16880658-16880730)
chr5 (66-229)||(28516432-28516591)
chr5 (72-217)||(1850624-1850763)
chr5 (164-229)||(19093884-19093949)
chr5 (55-132)||(23974747-23974824)
chr5 (169-229)||(16028623-16028683)
chr5 (169-228)||(30877564-30877623)
chr5 (168-231)||(39801591-39801654)
chr5 (143-229)||(11657698-11657783)
chr5 (172-229)||(10943844-10943900)
chr5 (165-206)||(21542489-21542530)
chr5 (177-230)||(32354211-32354264)
chr5 (73-180)||(22907913-22908014)
chr5 (164-222)||(4654421-4654479)
chr5 (66-132)||(22187263-22187329)
chr5 (177-226)||(13774949-13774998)
chr5 (168-229)||(24903695-24903756)
chr5 (61-90)||(28208240-28208269)
chr5 (155-224)||(39079755-39079823)
chr5 (143-217)||(42924841-42924917)
chr5 (55-115)||(10634254-10634314)
chr5 (58-90)||(12622192-12622224)
chr5 (155-230)||(24313570-24313645)
chr5 (155-230)||(24355907-24355982)
chr5 (165-217)||(30006397-30006449)
chr5 (68-132)||(34074653-34074717)
chr5 (55-107)||(39079882-39079934)
[»] chr6 (36 HSPs)
chr6 (71-229)||(29355854-29356009)
chr6 (66-229)||(12221913-12222074)
chr6 (66-229)||(9161101-9161260)
chr6 (66-230)||(1354755-1354912)
chr6 (66-229)||(1346942-1347098)
chr6 (66-229)||(2166409-2166569)
chr6 (66-229)||(2178042-2178202)
chr6 (147-230)||(12885967-12886050)
chr6 (148-229)||(12892064-12892145)
chr6 (55-225)||(13904984-13905147)
chr6 (143-228)||(7947371-7947455)
chr6 (66-217)||(3815088-3815234)
chr6 (166-229)||(6808468-6808531)
chr6 (167-230)||(23930125-23930188)
chr6 (155-217)||(3116140-3116202)
chr6 (66-190)||(6024211-6024332)
chr6 (168-228)||(10734905-10734965)
chr6 (165-229)||(13267797-13267861)
chr6 (80-228)||(17432332-17432483)
chr6 (143-229)||(26097210-26097294)
chr6 (168-228)||(11395836-11395895)
chr6 (66-206)||(14553490-14553626)
chr6 (165-208)||(24097649-24097692)
chr6 (143-198)||(24734694-24734749)
chr6 (143-229)||(25557775-25557859)
chr6 (66-132)||(8409221-8409287)
chr6 (155-217)||(14975101-14975163)
chr6 (66-132)||(14975171-14975237)
chr6 (66-226)||(15866041-15866194)
chr6 (63-132)||(12063442-12063511)
chr6 (165-208)||(32579497-32579540)
chr6 (66-228)||(12889404-12889562)
chr6 (66-116)||(33922935-33922985)
chr6 (143-184)||(2755466-2755507)
chr6 (149-228)||(383760-383837)
chr6 (55-90)||(19649300-19649336)
[»] chr8 (54 HSPs)
chr8 (66-228)||(13160680-13160836)
chr8 (66-230)||(39460992-39461153)
chr8 (66-217)||(21070708-21070859)
chr8 (66-217)||(20284080-20284230)
chr8 (66-230)||(36720774-36720933)
chr8 (66-229)||(28817625-28817783)
chr8 (66-229)||(35261657-35261815)
chr8 (66-217)||(12670261-12670405)
chr8 (66-227)||(45071243-45071398)
chr8 (66-217)||(7136538-7136686)
chr8 (66-229)||(30454096-30454252)
chr8 (55-226)||(44781506-44781674)
chr8 (66-209)||(24365078-24365217)
chr8 (66-229)||(6760800-6760960)
chr8 (68-217)||(18164771-18164914)
chr8 (55-217)||(29521696-29521854)
chr8 (66-228)||(17823554-17823711)
chr8 (66-230)||(26954110-26954272)
chr8 (66-230)||(44530127-44530286)
chr8 (106-229)||(20869941-20870061)
chr8 (94-229)||(5135289-5135418)
chr8 (66-205)||(20869523-20869653)
chr8 (66-216)||(2626497-2626645)
chr8 (66-229)||(25250500-25250660)
chr8 (55-227)||(42083699-42083867)
chr8 (66-208)||(24245429-24245564)
chr8 (143-226)||(29877146-29877227)
chr8 (66-230)||(12625867-12626027)
chr8 (66-139)||(28407394-28407467)
chr8 (66-229)||(8897763-8897921)
chr8 (143-215)||(17250888-17250960)
chr8 (147-217)||(16225075-16225145)
chr8 (148-217)||(16013511-16013580)
chr8 (172-229)||(40444845-40444902)
chr8 (165-229)||(26102589-26102653)
chr8 (70-230)||(31457155-31457309)
chr8 (143-217)||(5689683-5689755)
chr8 (165-228)||(28407475-28407538)
chr8 (168-217)||(27507985-27508034)
chr8 (143-184)||(43942376-43942417)
chr8 (165-229)||(35107310-35107374)
chr8 (143-217)||(8483949-8484021)
chr8 (71-198)||(11748282-11748406)
chr8 (74-187)||(23000260-23000365)
chr8 (179-229)||(27468091-27468141)
chr8 (143-217)||(44742529-44742602)
chr8 (143-215)||(19729392-19729462)
chr8 (67-191)||(35105902-35106022)
chr8 (143-217)||(26457781-26457851)
chr8 (55-193)||(14018003-14018137)
chr8 (161-214)||(18595906-18595959)
chr8 (67-132)||(30962864-30962929)
chr8 (94-217)||(389649-389769)
chr8 (167-227)||(36486567-36486627)
[»] chr1 (71 HSPs)
chr1 (66-230)||(30395724-30395885)
chr1 (61-214)||(27201643-27201793)
chr1 (66-229)||(18944644-18944805)
chr1 (55-209)||(11596503-11596651)
chr1 (66-230)||(34725096-34725253)
chr1 (66-229)||(46247952-46248110)
chr1 (66-230)||(20004088-20004249)
chr1 (66-230)||(27474282-27474440)
chr1 (79-230)||(10668239-10668387)
chr1 (66-228)||(35117765-35117925)
chr1 (66-229)||(38478281-38478437)
chr1 (66-216)||(32632569-32632713)
chr1 (81-230)||(35005139-35005285)
chr1 (66-217)||(46991805-46991951)
chr1 (55-225)||(18724549-18724713)
chr1 (66-216)||(47214512-47214655)
chr1 (66-230)||(14617039-14617198)
chr1 (66-229)||(6925101-6925259)
chr1 (66-230)||(19414440-19414597)
chr1 (55-230)||(6983809-6983977)
chr1 (66-217)||(18741968-18742118)
chr1 (66-214)||(23768334-23768477)
chr1 (67-230)||(9939463-9939624)
chr1 (66-232)||(41319802-41319963)
chr1 (55-217)||(45812548-45812704)
chr1 (55-217)||(2435797-2435955)
chr1 (143-228)||(4349713-4349796)
chr1 (79-217)||(35253198-35253329)
chr1 (143-217)||(42304218-42304292)
chr1 (66-217)||(45402096-45402243)
chr1 (155-229)||(50606488-50606562)
chr1 (55-229)||(20036210-20036379)
chr1 (143-198)||(19932783-19932838)
chr1 (55-226)||(15511150-15511319)
chr1 (66-229)||(19701571-19701730)
chr1 (97-226)||(22324925-22325049)
chr1 (66-229)||(12126836-12126992)
chr1 (68-229)||(8197046-8197202)
chr1 (143-217)||(31442400-31442473)
chr1 (66-214)||(17470361-17470503)
chr1 (66-206)||(25468285-25468420)
chr1 (55-229)||(50811929-50812099)
chr1 (143-225)||(10378738-10378818)
chr1 (147-229)||(15505643-15505722)
chr1 (66-193)||(22930104-22930224)
chr1 (106-229)||(31382213-31382330)
chr1 (66-198)||(25290164-25290300)
chr1 (143-230)||(20999848-20999933)
chr1 (165-229)||(30555210-30555274)
chr1 (66-179)||(33222985-33223093)
chr1 (66-209)||(44485128-44485266)
chr1 (143-229)||(1517310-1517394)
chr1 (143-229)||(23796540-23796624)
chr1 (143-229)||(43768214-43768298)
chr1 (168-230)||(33594129-33594191)
chr1 (67-229)||(22327101-22327255)
chr1 (165-217)||(4587574-4587626)
chr1 (165-209)||(30682907-30682951)
chr1 (143-230)||(19974072-19974158)
chr1 (143-225)||(39214961-39215042)
chr1 (155-216)||(45264411-45264471)
chr1 (55-164)||(50760288-50760394)
chr1 (146-198)||(6358199-6358250)
chr1 (55-142)||(25554803-25554890)
chr1 (143-229)||(35019305-35019388)
chr1 (66-109)||(40424743-40424786)
chr1 (66-132)||(2435984-2436050)
chr1 (174-228)||(25554742-25554796)
chr1 (170-198)||(3060003-3060031)
chr1 (173-229)||(16120819-16120875)
chr1 (181-229)||(50760239-50760287)
[»] chr4 (81 HSPs)
chr4 (66-229)||(5648237-5648394)
chr4 (66-227)||(6430627-6430782)
chr4 (66-230)||(16911540-16911701)
chr4 (55-229)||(54175031-54175201)
chr4 (66-228)||(44363130-44363289)
chr4 (66-229)||(16408600-16408760)
chr4 (66-229)||(30639358-30639515)
chr4 (66-218)||(54730227-54730377)
chr4 (66-229)||(30352579-30352748)
chr4 (66-217)||(40915807-40915952)
chr4 (66-229)||(47528529-47528685)
chr4 (66-229)||(48598824-48598980)
chr4 (66-228)||(20224962-20225117)
chr4 (66-198)||(5306694-5306820)
chr4 (66-229)||(23501771-23501925)
chr4 (66-229)||(11054147-11054303)
chr4 (160-230)||(47482848-47482918)
chr4 (105-229)||(20639657-20639777)
chr4 (66-217)||(21646942-21647090)
chr4 (66-229)||(35567148-35567306)
chr4 (55-225)||(25343154-25343321)
chr4 (80-226)||(29207900-29208039)
chr4 (68-208)||(17043414-17043549)
chr4 (143-228)||(20225126-20225211)
chr4 (65-229)||(9832312-9832469)
chr4 (58-217)||(19027818-19027972)
chr4 (66-229)||(23580207-23580365)
chr4 (55-217)||(47441541-47441698)
chr4 (143-229)||(20908635-20908720)
chr4 (155-229)||(33836486-33836560)
chr4 (66-228)||(30690176-30690340)
chr4 (143-230)||(51865036-51865121)
chr4 (62-209)||(32478810-32478946)
chr4 (106-227)||(7909281-7909397)
chr4 (66-229)||(13256398-13256554)
chr4 (74-209)||(25463108-25463238)
chr4 (166-228)||(38755908-38755970)
chr4 (94-229)||(47443963-47444093)
chr4 (165-228)||(11394924-11394987)
chr4 (165-228)||(11404651-11404714)
chr4 (143-229)||(25629101-25629185)
chr4 (67-218)||(30496332-30496476)
chr4 (67-208)||(49938613-49938746)
chr4 (167-229)||(32484307-32484369)
chr4 (165-230)||(14983906-14983971)
chr4 (167-228)||(40553937-40553998)
chr4 (143-207)||(49796849-49796911)
chr4 (66-214)||(20405071-20405210)
chr4 (147-215)||(21489143-21489210)
chr4 (145-229)||(36816383-36816466)
chr4 (165-229)||(38786681-38786745)
chr4 (69-217)||(39077807-39077948)
chr4 (71-215)||(41018807-41018945)
chr4 (55-139)||(42164232-42164316)
chr4 (166-229)||(50555655-50555718)
chr4 (66-132)||(14590815-14590881)
chr4 (166-228)||(25388249-25388311)
chr4 (66-226)||(487128-487292)
chr4 (66-139)||(17315382-17315455)
chr4 (164-225)||(36589815-36589876)
chr4 (66-214)||(37494829-37494972)
chr4 (71-205)||(7385499-7385628)
chr4 (146-217)||(16494272-16494343)
chr4 (55-208)||(30581485-30581635)
chr4 (178-229)||(35532077-35532128)
chr4 (55-225)||(54966988-54967151)
chr4 (66-228)||(55766466-55766623)
chr4 (66-209)||(3580859-3580993)
chr4 (73-204)||(32629293-32629418)
chr4 (66-208)||(39029080-39029218)
chr4 (168-229)||(19027986-19028047)
chr4 (167-208)||(44718641-44718682)
chr4 (165-229)||(28494223-28494287)
chr4 (143-227)||(8473621-8473705)
chr4 (143-229)||(9987833-9987917)
chr4 (76-230)||(7038041-7038189)
chr4 (147-208)||(2813181-2813242)
chr4 (148-197)||(35894492-35894540)
chr4 (55-132)||(54640430-54640507)
chr4 (166-198)||(8820581-8820613)
chr4 (55-115)||(50856344-50856404)
[»] scaffold0168 (1 HSPs)
scaffold0168 (66-229)||(30557-30713)
[»] scaffold0258 (1 HSPs)
scaffold0258 (66-229)||(13023-13180)
[»] scaffold0049 (1 HSPs)
scaffold0049 (74-228)||(58963-59114)
[»] scaffold0057 (4 HSPs)
scaffold0057 (66-229)||(46809-46967)
scaffold0057 (66-214)||(24786-24924)
scaffold0057 (143-230)||(43709-43795)
scaffold0057 (164-208)||(46727-46771)
[»] scaffold0311 (1 HSPs)
scaffold0311 (66-215)||(10788-10932)
[»] scaffold0187 (2 HSPs)
scaffold0187 (66-198)||(10080-10205)
scaffold0187 (66-198)||(20408-20533)
[»] scaffold1176 (1 HSPs)
scaffold1176 (66-216)||(1599-1742)
[»] scaffold0015 (1 HSPs)
scaffold0015 (143-230)||(48632-48717)
[»] scaffold0254 (1 HSPs)
scaffold0254 (66-191)||(4135-4258)
[»] scaffold0180 (1 HSPs)
scaffold0180 (143-217)||(24144-24216)
[»] scaffold0223 (1 HSPs)
scaffold0223 (66-216)||(11110-11252)
[»] scaffold0018 (1 HSPs)
scaffold0018 (94-216)||(72879-72997)
[»] scaffold0954 (1 HSPs)
scaffold0954 (143-228)||(3596-3679)
[»] scaffold0005 (1 HSPs)
scaffold0005 (66-132)||(226497-226563)
[»] scaffold0036 (1 HSPs)
scaffold0036 (74-197)||(35048-35167)
[»] scaffold0031 (1 HSPs)
scaffold0031 (66-135)||(43107-43176)
[»] scaffold0024 (1 HSPs)
scaffold0024 (66-107)||(83853-83894)
[»] scaffold0194 (1 HSPs)
scaffold0194 (63-115)||(24639-24691)
[»] scaffold0167 (1 HSPs)
scaffold0167 (165-209)||(23671-23715)


Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 39123803 - 39124081
Alignment:
Q  1 ttattctgcctgcatactagatattatatcttttaaccagagatcatgtgtgggtggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggt 100  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39123803 ttattcttcctgcatactagatattatatcttttaacaagagatcatttgtgggtggcgcaatggtaaagttgttgtcatgtgactgaaacgacacgggt 39123902  T
Q  101 ccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgag 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39123903 tcaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgag 39124002  T
Q  201 ggagctttggtgcaccgagctgcccttttaggcccatgtggtgttgtgtatttatgctcttgaagagttaacagtatat 279  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39124003 ggagctttggtgcaccaagctgcccttttaggcccatgtggtgttgtgtatttatgctcttgaagagttaacagtatat 39124081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 40463855 - 40464013
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||||| || | ||||||| |||||| ||||||| ||||||||||||||||| ||||    ||||||||||| ||||||||  |    
T  40463855 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgtaaaaactgggt----aaggctgcgtataatacacc--a 40463948  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||||||||| ||||||||||||||| ||||||||  |||||||||| ||||||||||    
T  40463949 aatggtgggaccccttctcggaccctgcgtatgcgggagcttcagtgcaccgagttgccctttta 40464013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 228
Target Start/End: Original strand, 47716438 - 47716596
Alignment:
Q  67 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||| |||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||     
T  47716438 aaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaat 47716533  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||||||||||||||||| || |||| |||||||||||||||||| | ||||||||    
T  47716534 aatggtgggaccccttcccggaccccgcatatgcgggagctttggtgcaccgggttgcccttt 47716596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 42805502 - 42805662
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||| ||| ||||||||||    
T  42805502 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgtgtacaatacaccaa 42805597  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
     ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | |||||||||    
T  42805598 taatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 42805662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 21172164 - 21172007
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||| ||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||    
T  21172164 taaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 21172070  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  21172069 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 21172007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 43557450 - 43557611
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | || |||| |||||||| ||||| | |||||||||||||| ||| |||    |||||||||| ||||||||||    
T  43557450 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagta----aggctgcgtacaatacaccaa 43557545  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagc-tttggtgcaccgagctgccctttt 229  Q
     |||||||||||||| |||||||| ||||||||| |||||| ||| |||||||| | |||||||||    
T  43557546 taatggtgggaccccctcccggactctgcgtatgcgggagcttttagtgcaccgggttgccctttt 43557611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 32758239 - 32758395
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    |||||| ||| |||||||||||    
T  32758239 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgtgtacaatacaccaaa 32758333  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  32758334 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 32758395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 229
Target Start/End: Complemental strand, 42391251 - 42391099
Alignment:
Q  70 gttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatg 169  Q
    ||||||||||||||||||||| | ||||||| |||||||| ||||| |  |||||||||||| |||||||    |||||||||| |||||||||||  ||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tg 42391159  T
Q  170 gtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  42391158 gtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 42391099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 10693228 - 10693073
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||  ||||||    |||||||||| |||||||||||    
T  10693228 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaag-agggta----aggctgcgtacaatacaccaaa 10693134  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||| | | ||||||||    
T  10693133 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcactgggttgcccttt 10693073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 2541177 - 2541030
Alignment:
Q  66 taaagttgttgtcatgtgactg-aaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacacca 163  Q
    |||||||||||||||||||||| ||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||||||||||  ||||||||    
T  2541177 taaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtactatacacca 2541082  T
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||  ||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  2541081 aa--tggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccg 2541030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 229
Target Start/End: Original strand, 19265782 - 19265949
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 154  Q
    |||||||| | |||||||||||||| |||||||||| | ||||||| |||||| | || || | | |||||||||||| |||||    |||||||||||     
T  19265782 tggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgtaaaaagagggt----aaggctgcgtac 19265877  T
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||  ||||||||||||||||||||||| ||| | |||| ||||||||| |||||||| |||||||||||    
T  19265878 aatacacc--aaatggtgggaccccttcccgga-cctacatatgtgggagctttagtgcaccgggctgccctttt 19265949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 216
Target Start/End: Complemental strand, 33872066 - 33871922
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | | ||||| |||||||| |||||   |||||||||||||||||| |    ||||||||||| ||||||||  |    
T  33872066 taaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaacaggat----aaggctgcgtacaatacacc--a 33871973  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 216  Q
    ||||||||||||||||||| ||||||| ||||| | ||||||| |||||||    
T  33871972 aatggtgggaccccttcccagaccctgtgtatgcgagagctttagtgcacc 33871922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 22699127 - 22698978
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| |  | |||| |||||||| ||||  |||||||||||| ||||||||||    ||| ||||||| ||||||||||    
T  22699127 taaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggt----aagactgcgtacaatacaccaa 22699032  T
Q  165 aaatggtgggaccc-cttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||||||||  ||||||||||||| ||||| ||||||| | ||||||||    
T  22699031 aaatggtgggacccttttcccggaccctgtgtatgcgggagctatagtgcaccg 22698978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 27629612 - 27629770
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||| |||| |||| | ||||||| |||||||| ||||| | ||||||||| |||||||||||    |||| |||||||||||||||      
T  27629612 taaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggt----aaggttgcgtaaaatacacc-- 27629705  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||||||||||| |||||| |||| || |||||  |||||||| | |||||||||    
T  27629706 aaatggtgggaccccttcccgggccctgcatatgcggtagcttcagtgcaccgggttgccctttt 27629770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 42798647 - 42798805
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| |||||| | ||||| |||||||||||||||| || ||||    |||||||||| ||||||||||    
T  42798647 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggta----aggctgcgtacaatacaccaa 42798742  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |  ||||||||||| |||||||||||||| |||| ||||||| | ||||| || | |||||||||    
T  42798743 a--tggtgggaccctttcccggaccctgcatatgcgggagctatagtgcatcgggttgccctttt 42798805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 34626364 - 34626207
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||| ||||| | ||| | | |||||||| ||||| | ||| |||||||||||||||||    |||||||||  |||||||||||    
T  34626364 taaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgtaaaaacagggta----aggctgcgttcaatacaccaaa 34626269  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
      |||||||| |||||||||||||||||||||| ||||||||| || || || | |||||||||    
T  34626268 --tggtgggatcccttcccggaccctgcgtatgcgggagctttagttcatcgggttgccctttt 34626207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 48735278 - 48735122
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctag-aaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| | ||||   ||||||||||||| || ||||    |||||||||| ||||||||||    
T  48735278 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgtaaaa-cacggta----aggctgcgtacaatacaccaa 48735184  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    |  |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  48735183 a--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 48735122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 11617745 - 11617589
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| |||||   |||||||||||||| |||||||    || ||||||| ||||||||||    
T  11617745 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----agactgcgtacaatacaccaa 11617650  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
    |  |||||||||||||||| ||||||||||||||  ||| |||| |||||||| | |||||||    
T  11617649 a--tggtgggaccccttcctggaccctgcgtatgcaggacctttagtgcaccgggttgccctt 11617589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 27889402 - 27889315
Alignment:
Q  140 gggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||||||| ||||| | |||||||||    
T  27889402 gggaaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttggtacaccgggttgccctttt 27889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 13805069 - 13805217
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 154  Q
    |||||||||| ||||||||||||||||||||||||| |  |||||| |||||||| ||||  | |||| |||| ||||||||   || ||||||| |||     
T  13805069 tggcgcaatggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaatagcctctggtgt-aaaacagg---ggtaaggctgtgtac 13805164  T
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 209  Q
    ||||||||  ||||||||||||| ||||| |||||||||||||| ||||||||||    
T  13805165 aatacacc--aaatggtgggaccacttcctggaccctgcgtatgcgggagctttg 13805217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 209
Target Start/End: Complemental strand, 28362313 - 28362164
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 154  Q
    |||||||| | |||||||||||||||||| |||||| | ||| ||| |||||||||||||| | ||||||||||||||     | || |||||||||||     
T  28362313 tggcgcaacggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaa---acttggtaaggctgcgtac 28362217  T
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 209  Q
    ||||||||  |||||||||||||||||||| |||| ||| |||| ||||||||||    
T  28362216 aatacacc--aaatggtgggaccccttcccagaccttgcatatgtgggagctttg 28362164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 7879644 - 7879774
Alignment:
Q  94 cacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 192  Q
    ||||||| |||||||| |||||  ||||||||||||||| || ||||    |||||||||| |||||||||||  |||||||||||||||||||||||||    
T  7879644 cacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctg 7879737  T
Q  193 cgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||| ||||||||  |||||||| | |||||||||    
T  7879738 cgtatgcgggagcttcagtgcaccgggttgccctttt 7879774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 46354172 - 46354293
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||| || || | ||||||| |||||||| |||||   |||||||||||||| |||||||    |||||||||| ||||||||||    
T  46354172 taaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 46354267  T
Q  165 aaatggtgggaccccttcccggaccc 190  Q
     |||||||||||||||||||||||||    
T  46354268 taatggtgggaccccttcccggaccc 46354293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 213
Target Start/End: Complemental strand, 3469347 - 3469190
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa---cagggtagggaaggctgcg 151  Q
    |||||||| | ||||||||||||||||||||||||| | ||| |   ||||||||||||||  |||||||||||||||   ||||||| ||     ||||    
T  3469347 tggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaacattctcttgtgtaaaaaaaacagggtacggt----tgcg 3469252  T
Q  152 taaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgc 213  Q
    || |||||||||||||||| ||||||||||||  ||||||| ||||| ||||||||| ||||    
T  3469251 tacaatacaccaaaaatggcgggaccccttcctagaccctgtgtatgcgggagctttagtgc 3469190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 29907395 - 29907552
Alignment:
Q  66 taaagttgttgt--catgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacacca 163  Q
    ||||||||||||  ||||||||||||| | ||||||| |||||||||||||| | |||||||||||||| |  ||  | ||||||||||  ||||||||     
T  29907395 taaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaa-atagt--gtaaggctgcgttcaatacacc- 29907490  T
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
    |||||||||||||||| |||||||||||  ||||| ||||||||| |||||||| | |||||||    
T  29907491 aaaatggtgggaccccatcccggaccct--gtatgcgggagctttagtgcaccgggttgccctt 29907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 94 - 215
Target Start/End: Complemental strand, 18512581 - 18512466
Alignment:
Q  94 cacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgc 193  Q
    ||||||| |||||||| |||||    ||||||||||||| ||||||    |||||||||| |||||||| ||  ||||||||||||||||||||||||||    
T  18512581 cacgggttcaagtcctggaaacaacatcttgtgtaaaaatagggta----aggctgcgtacaatacaccgaa--tggtgggaccccttcccggaccctgc 18512488  T
Q  194 gtatgagggagctttggtgcac 215  Q
    ||||| ||||||||||||||||    
T  18512487 gtatgcgggagctttggtgcac 18512466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 35334971 - 35334827
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||||| || | |||| || |||||||| ||||| ||||| |||  ||||||||||||    || ||| ||| |||||||| ||    
T  35334971 taaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacagtctcgtgta-aaaaacagggta----agactgtgtacaatacaccgaa 35334877  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
      |||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  35334876 --tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccg 35334827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 16341256 - 16341413
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||| ||||||   ||||| | ||||||| ||||| |||||||| | |||||||||||||| |||||||    ||||| |||| ||||||||||    
T  16341256 taaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggta----aggctacgtacaatacaccaa 16341351  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
    || ||||||| || |||||||||||   | |||| |||||||||||||||||| |||||||||    
T  16341352 aa-tggtgggccctcttcccggacctatcatatgcgggagctttggtgcaccgggctgccctt 16341413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 74 - 227
Target Start/End: Original strand, 18747472 - 18747621
Alignment:
Q  74 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaaaatggt 171  Q
    |||||| |||||||||| | ||||||  |||||| | ||||| | || |||||||||||  ||||||    ||||||||||| ||||||||  || ||||    
T  18747472 ttgtcacgtgactgaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggt----aaggctgcgtataatacacc--aattggt 18747565  T
Q  172 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
    |||||||||||| | |||||||||||| ||||||||| |||||||| |||||||||    
T  18747566 gggaccccttcctgaaccctgcgtatgcgggagctttagtgcaccgggctgccctt 18747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 19427046 - 19426889
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||| |||| | ||||||| |||||||| ||||| | |||||||||| |||| |||||    ||| ||||||| ||||||||      
T  19427046 taaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggt----aagactgcgtacaatacacc-- 19426953  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||| |||||| |||||||||| |||| | ||||||  |||||||| | |||||||||    
T  19426952 aaatggtggga-cccttctcggaccctgcatatgcgagagcttcagtgcaccgggttgccctttt 19426889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 47078010 - 47077866
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| ||||||||||| |||| || ||    || | |||||| |||||||  ||    
T  47078010 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgt-aaaatagagt----aaagttgcgtacaatacac--aa 47077918  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||||||||||||||||  ||||| | |||| ||||||| | ||||||||    
T  47077917 aatggtgggaccccttcccaaaccctacatatgcgggagctctagtgcaccg 47077866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 228
Target Start/End: Complemental strand, 23419842 - 23419674
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgta 153  Q
    |||||||| | |||||||| |||||||||||| ||| | ||| ||| ||||| || ||||| | |||||||||| ||||||||||    ||| |||||||    
T  23419842 tggcgcaacggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggt----aagactgcgta 23419747  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
     ||||||||  |||||||||||||||||||  |||| ||||| || ||| ||||| ||||| || ||||||||||    
T  23419746 caatacacc--aaatggtgggaccccttcctagaccttgcgtgtgcgggggctttagtgcatcgggctgcccttt 23419674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 32233286 - 32233134
Alignment:
Q  71 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 170  Q
    |||||||||  ||||||||| | || |||| |||||||| |||||   |||||||||||||||||||||    |||| ||||| | |||||||||  |||    
T  32233286 ttgttgtcacctgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaacagggta----aggcagcgtatattacaccaaa--tgg 32233193  T
Q  171 tgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||  |||||||  ||||||| |||||||||||||  |||||||| |||||||||||    
T  32233192 tgggattccttcccaaaccctgcatatgagggagcttcagtgcaccgggctgccctttt 32233134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 45019012 - 45018935
Alignment:
Q  141 ggaaggctgcgtaaaatacaccaaaaa--tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 216  Q
    ||||||||||||| |||| ||||||||  |||||| |||||||||||||||||||||||| ||||||||| |||||||    
T  45019012 ggaaggctgcgtacaatataccaaaaaactggtggaaccccttcccggaccctgcgtatgcgggagctttagtgcacc 45018935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 38604558 - 38604641
Alignment:
Q  119 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    |||||||||||||||||||||    |||||||||| |||||||||||  ||||| |||||||| |||||||||||||||| |||||||||    
T  38604558 ctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgagacccctttccggaccctgcgtatgcgggagcttt 38604641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 208
Target Start/End: Complemental strand, 28078286 - 28078152
Alignment:
Q  68 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 167  Q
    |||||||||||||||||||| || | ||||||| |||||||||||||| ||||| |||  |||||||||||    |||| ||| |  ||||||||  |||    
T  28078286 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagtctcgtgtaaaaaaacagggt----aaggttgcatgcaatacacc--aaa 28078193  T
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    |||||||||||||||||| | ||||| |||| | |||||||    
T  28078192 tggtgggaccccttcccgaatcctgcatatgcgagagcttt 28078152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 14732979 - 14732832
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | || |||| |||||||| ||||| | |||   |||||||| |||||||    ||||||||| || ||||||||    
T  14732979 taaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggta----aggctgcgtcaa-tacaccaa 14732885  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||  || |||||||| ||||||  |||| ||||||||| ||||||||    
T  14732884 aaatggtgaaactccttcccgaaccctgtttatgcgggagctttagtgcaccg 14732832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 19266428 - 19266564
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | |  |||| ||||||||  |||  | | |||| ||||||| |||||||    |||||||||| ||||||||||    
T  19266428 taaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggta----aggctgcgtacaatacaccaa 19266523  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctt 207  Q
    |  | |||||| |||||||||||||||||||||| ||||||||    
T  19266524 a--ttgtgggatcccttcccggaccctgcgtatgcgggagctt 19266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 216
Target Start/End: Original strand, 42476851 - 42476994
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||| ||| | ||||| | ||||| || ||||| ||||||||||||||| || ||||    |||||||||| |||||||||||    
T  42476851 taaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgtaaaa-caaggta----aggctgcgtacaatacaccaaa 42476945  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 216  Q
      ||||||||||||||||  | | |||| |||| ||||||| | |||||||    
T  42476946 --tggtgggaccccttcctaggctctgcatatgcgggagctctagtgcacc 42476994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 42495992 - 42495919
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 139  Q
    ||||||||||||||| ||||||||| | ||||||| |||||||| ||||| | ||||||| |||||||||||||    
T  42495992 taaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaacagggta 42495919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 13792213 - 13792149
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||| ||||||||||| || ||||||||||||  |||||||| ||||||||||||||||||||    
T  13792213 aaatggcgggaccccttctcgaaccctgcgtatgctggagcttttgtgcaccgagctgccctttt 13792149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 21566485 - 21566560
Alignment:
Q  141 ggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||| ||||||| |||||||||||| |||| ||||||||||||| ||||||| |||| ||||||||| ||||||||    
T  21566485 ggaagactgcgtacaatacaccaaaa-tggtaggaccccttcccgaaccctgcatatgcgggagctttagtgcaccg 21566560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 230
Target Start/End: Complemental strand, 31591192 - 31591107
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||| ||||||  | ||||||||||||||||||||||||| ||| |||| ||||||| | |||||||| | ||||||||||    
T  31591192 aaggctgcgtacaataca--ataaatggtgggaccccttcccggaccttgcatatgcgggagctctagtgcaccgggttgccctttta 31591107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 33500569 - 33500625
Alignment:
Q  147 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggga 203  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  33500569 ctgcgtactatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcggga 33500625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 35787372 - 35787267
Alignment:
Q  119 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 218  Q
    |||||||||||||||| ||||    ||| |||||| |||||||||||  ||| |||||||||||||||||| |||||||| ||||||||   |||||||     
T  35787372 ctcttgtgtaaaaacatggta----aggttgcgtacaatacaccaaa--tggcgggaccccttcccggaccttgcgtatgcgggagcttcaatgcaccgg 35787279  T
Q  219 gctgccctttta 230  Q
    | ||||||||||    
T  35787278 gttgccctttta 35787267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 23231609 - 23231692
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||| |||||||| ||  || ||||||||||||||| |||||||||||| || |||||| |||||||||| | ||||||    
T  23231609 aaggctgcgtataatacaccgaa--tgatgggaccccttcccgaaccctgcgtatgcggcagctttagtgcaccgagtttcccttt 23231692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 14099163 - 14099036
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | || ||||  ||||||| ||||  | || ||||||||||| |||| ||    || ||||||| ||||||||||    
T  14099163 taaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggtta----agactgcgtacaatacaccaa 14099068  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatg 198  Q
    |  |||||||||||||||||| ||||| ||||||    
T  14099067 a--tggtgggaccccttcccgaaccctacgtatg 14099036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 14409180 - 14409053
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | || ||||  ||||||| ||||  | || ||||||||||| |||| ||    || ||||||| ||||||||||    
T  14409180 taaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggtta----agactgcgtacaatacaccaa 14409085  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatg 198  Q
    |  |||||||||||||||||| ||||| ||||||    
T  14409084 a--tggtgggaccccttcccgaaccctacgtatg 14409053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 18327012 - 18327085
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 139  Q
    |||||||||||||||||||||  || | ||||||| |||||||  ||||| | |||||||||||||||||||||    
T  18327012 taaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttgtgtaaaaacagggta 18327085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 7193063 - 7193127
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa 130  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| |||||   ||||||||||||    
T  7193063 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaa 7193127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 203
Target Start/End: Original strand, 7644923 - 7645066
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgta 153  Q
    ||||||| || |||| ||||||| | |||||||||| | ||||||| |||||||| ||||| | ||||||||| |||||||||||    |||   |||||    
T  7644923 tggcgcagtggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggt----aagatagcgta 7645018  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggga 203  Q
     |||||||| ||||| |||||||||||| || ||||||||||||| ||||    
T  7645019 caatacacc-aaaattgtgggacccctt-cctgaccctgcgtatgcggga 7645066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 227
Target Start/End: Original strand, 11741774 - 11741927
Alignment:
Q  67 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 166  Q
    |||||||||||||||||||||||| | || |||| ||||||||  |||| |  ||| ||||||||  ||||||    |||||||||| |||||||||||     
T  11741774 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgtaaaat-agggta----aggctgcgtacaatacaccaaa- 11741867  T
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
     |||||||| |||||||||||  ||||  ||| ||||||| | |||||||| | |||||||    
T  11741868 -tggtgggatcccttcccggattctgcacatgcgggagctctagtgcaccgggttgccctt 11741927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 210
Target Start/End: Complemental strand, 48123652 - 48123502
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa-aacagggtagggaaggctgcgta 153  Q
    |||||||| | |||||||||| ||||||| |||||| | || |||| |||||||| ||||| | |||||||||||| ||||||||    ||  |||| ||    
T  48123652 tggcgcaacggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggt----aaaactgcata 48123557  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttgg 210  Q
     ||||||||  ||||||||||||||||| | ||||| ||| |||| ||||| |||||    
T  48123556 caatacacc--aaatggtgggacccctttctggaccatgcatatgcgggaggtttgg 48123502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 217
Target Start/End: Complemental strand, 38262340 - 38262207
Alignment:
Q  79 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaatggtgggacc 177  Q
    ||||||||| || | ||||||| |||||||| ||||| ||||||||||||||||     || || || | ||| || |||||||||||  || |||||||    
T  38262340 atgtgactggaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaa----tatggtaatgttgcatacaatacaccaaa--tgatgggacc 38262247  T
Q  178 ccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||||| || ||||||||| ||||||||| ||||||||    
T  38262246 ccttcccgaacactgcgtatgcgggagctttagtgcaccg 38262207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 6736868 - 6737022
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||| |||||||| | ||||||| ||||||||  ||||   ||||||| ||||||||    ||| ||| |||| || ||||||||  |    
T  6736868 taaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataaaaaca----aggtaagactgcatacaatacacc--a 6736961  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    |||||| ||| || |||||||||| |||||| || ||| |||| |||||||| ||||||||||    
T  6736962 aatggt-ggagcctttcccggaccttgcgtacgaaggaccttt-gtgcaccgggctgcccttt 6737022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 208
Target Start/End: Original strand, 35203445 - 35203556
Alignment:
Q  94 cacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 192  Q
    ||||||| |||||||| |||||  ||||||||||||||| |||| ||    || ||||||| |||| |||||||||||||||| ||||||| | || ||     
T  35203445 cacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggata----agactgcgtacaatataccaaaaatggtgggatcccttcctgaactcta 35203540  T
Q  193 cgtatgagggagcttt 208  Q
    |||||| |||||||||    
T  35203541 cgtatgcgggagcttt 35203556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 1408529 - 1408562
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatg 198  Q
    ||||||||||||||||||||||||||||||||||    
T  1408529 aaatggtgggaccccttcccggaccctgcgtatg 1408562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 25434112 - 25434157
Alignment:
Q  185 ggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||||    
T  25434112 ggaccctgcgtatgcgggagctttagtgcaccgagctgtcctttta 25434157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 5180314 - 5180202
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | || |||| ||| | || ||||| | ||||||||| |||||||||||    ||| ||| ||| || |||||||    
T  5180314 taaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggt----aagactgtgtacaacacaccaa 5180219  T
Q  165 aaatggtgggacccctt 181  Q
    ||||| | |||||||||    
T  5180218 aaatgattggacccctt 5180202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 42495913 - 42495874
Alignment:
Q  177 cccttcccggaccctgcgtatgagggagctttggtgcacc 216  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  42495913 cccttcccggaccctgcgtatgcgggagctttagtgcacc 42495874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 7794663 - 7794597
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 132  Q
    |||||||||||| ||||||||| || | ||||||| |||||||| ||||| | ||||| ||||||||    
T  7794663 taaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttatgtaaaaa 7794597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 44123778 - 44123705
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 139  Q
    |||||||| ||||||||||||||||    |||||| ||||| || ||||| | |||||||||||||||| ||||    
T  44123778 taaagttggtgtcatgtgactgaaagattacgggttcaagtactggaaacagcctcttgtgtaaaaacaaggta 44123705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 36602535 - 36602583
Alignment:
Q  181 tcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||| ||||||||||||| ||||||||| |||||||| | |||||||||    
T  36602535 tcccagaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 36602583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 55 - 228
Target Start/End: Original strand, 10543664 - 10543835
Alignment:
Q  55 tggcgcaa-tgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgt 152  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||| |||||||| ||||||| |||||||||||||| |||||||    |||||||||    
T  10543664 tggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggta----aggctgcgt 10543759  T
Q  153 aaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    | |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  10543760 acaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10543835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 24200782 - 24200622
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  24200782 taaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 24200687  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||| |||||||||||||||| ||||| | ||||||| |||||||| | |||||||||    
T  24200686 aaatggtgggaacccttcccggaccctgagtatgtgagagctttagtgcaccgggttgccctttt 24200622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 14530296 - 14530455
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    ||||| |||| ||||||||||    
T  14530296 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----aggctacgtacaatacaccaa 14530391  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
     ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  14530392 taatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 14530455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 232
Target Start/End: Original strand, 5841001 - 5841169
Alignment:
Q  61 aatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatac 159  Q
    ||||||||||||||||||||||||||| || | ||||||| |||||||||||||| | || |||||||||||     ||||| |||| |||||| |||||    
T  5841001 aatgataaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaa----tagggtaaggatgcgtacaatac 5841096  T
Q  160 accaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttagg 232  Q
    | ||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| ||||||||||||    
T  5841097 atcaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgcccttttagg 5841169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 8455473 - 8455314
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||||| ||||||||    |||||||||| ||||||||||    
T  8455473 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggta----aggctgcgtacaatacaccaa 8455378  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |  |||||||||||||||||||||||||||||||  |||||||| |||||||| | ||||||||||    
T  8455377 a--tggtgggaccccttcccggaccctgcgtatgccggagctttagtgcaccgggttgccctttta 8455314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 9671158 - 9671317
Alignment:
Q  66 taaagttgttgtcatgtgactg-aaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| ||| | ||||||| ||| |||| ||||| | ||||||||||||| |||||||    |||||||||| ||||||||||    
T  9671158 taaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaa 9671252  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 231  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||||    
T  9671253 a--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttag 9671317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 66 - 197
Target Start/End: Complemental strand, 12024075 - 12023950
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  |    
T  12024075 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--a 12023982  T
Q  166 aatggtgggaccccttcccggaccctgcgtat 197  Q
    |||||||||||||| |||||||||||||||||    
T  12023981 aatggtgggaccccctcccggaccctgcgtat 12023950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 25249894 - 25249737
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||||| || | ||||||| |||||| | ||||| |||||||||||| |||||||||    ||||||||||| ||||||||  |    
T  25249894 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgtacaaacagggt----aaggctgcgtacaatacacc--a 25249801  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||| ||||||||| |||||||||||| | ||||||| |||||||| | |||||||||    
T  25249800 aatggtgggatcccttcccgaaccctgcgtatgcgtgagctttagtgcaccgggttgccctttt 25249737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 17896237 - 17896396
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||| |||| | ||||| | ||||||||||||||   |||||||||||||| |   ||||| ||||||||||| |||| |||||    
T  17896237 taaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaa---tagggtaaggctgcgtacaatataccaa 17896333  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |  ||||||||||||||| ||||||||||||||| ||||||||| ||||| |||| |||||||||    
T  17896334 a--tggtgggaccccttctcggaccctgcgtatgtgggagctttagtgcatcgagttgccctttt 17896396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 68 - 230
Target Start/End: Complemental strand, 21779414 - 21779259
Alignment:
Q  68 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 167  Q
    ||||||||||||||||||||||| | ||||||| |||||||| || || | ||||||||||||| |||||||    ||| |||||| |||||||||||      
T  21779414 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgtaaaa-cagggta----aggttgcgtacaatacaccaaa-- 21779322  T
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  21779321 tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 21779259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 21377230 - 21377073
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| |  ||| || |||||| |||||||   |||||||||||||| |||||||    |||||| ||| ||| ||||||    
T  21377230 taaagttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaaacagggta----aggctgggtacaatgcaccaa 21377135  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |  |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  21377134 a--tggtgggaccccttcccgaaccctgcgtatgtgggagcttt-gtgcaccgagctgccctttt 21377073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 229
Target Start/End: Original strand, 14444720 - 14444864
Alignment:
Q  79 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccc 178  Q
    ||||||||| || | ||||||| |||||||| ||||| | |||||||||||||||||||||    |||||| |||  ||||||||||  |||||||||||    
T  14444720 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggta----aggctgtgtacgatacaccaaa--tggtgggaccc 14444813  T
Q  179 cttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||||||||| ||||||||| |||||||  | |||||||||    
T  14444814 cttcccggaccctgcgtatgcgggagctttagtgcaccaggttgccctttt 14444864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 79 - 229
Target Start/End: Original strand, 10546153 - 10546299
Alignment:
Q  79 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggac 176  Q
    |||||||||||| | ||||||| |||||||| |||||   ||||||| ||||||  |||||||    |||||||||| |||||||||||  |||||||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggac 10546246  T
Q  177 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  10546247 cccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 10546299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 66 - 216
Target Start/End: Original strand, 7214512 - 7214659
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | || |||| |||||| | ||||| ||||||||||||||| |||||||    ||||||||||| ||||||| ||    
T  7214512 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggt----aaggctgcgtacaatacacaaa 7214607  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 216  Q
    |||||||| || |||||| ||||| ||||||||| | ||| ||| |||||||    
T  7214608 aaatggtgagatcccttctcggacactgcgtatgcgagagttttagtgcacc 7214659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 17667980 - 17668138
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||    |||||||||||||| |||||||    |||||||||| ||||||||||    
T  17667980 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggta----aggctgcgtacaatacaccaa 17668075  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |  |||||| |||||||| || |||||||||||  ||||||||| |||||||| | |||||||||    
T  17668076 a--tggtggaaccccttctcgaaccctgcgtatatgggagctttagtgcaccgggttgccctttt 17668138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 25079875 - 25079717
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||||| || | ||||||| |||||| |||||||   |||||||||||||| |    ||| |||| |||||| |||||||| ||    
T  25079875 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaaaca--aggtaaggatgcgtacaatacaccgaa 25079778  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
      |||||||||||||||||||||||||||||||   ||||||| |||||||| | ||||||||    
T  25079777 --tggtgggaccccttcccggaccctgcgtatgcaagagctttagtgcaccgggttgcccttt 25079717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 23397744 - 23397899
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | || |||| |||||||| ||||| | |||||||||||||  ||||||    ||||| |||| |||||||||||    
T  23397744 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaat-agggta----aggctacgtacaatacaccaaa 23397838  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
      ||||||||||||||| |||||||| | |||| ||||||| | |||||||| | ||||||||    
T  23397839 --tggtgggaccccttctcggaccctacatatgcgggagctctagtgcaccgggttgcccttt 23397899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 11514414 - 11514572
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| ||| |||| ||||| | |||||||||||||| ||  |||    |||||||||| ||||||||||    
T  11514414 taaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagta----aggctgcgtacaatacaccaa 11514509  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |  ||||||||||| ||||| ||||||||||||| ||||||||| ||||||||   ||||||||||    
T  11514510 a--tggtgggaccc-ttcccagaccctgcgtatgcgggagctttagtgcaccggattgccctttta 11514572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 36871509 - 36871627
Alignment:
Q  104 agtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggga 203  Q
    |||||| ||||| | ||||||||| |||||||||||    |||||||||| |||||||||||  |||||||||||||||||||| |||||||||| ||||    
T  36871509 agtcctggaaacagcctcttgtgtgaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccgga-cctgcgtatgcggga 36871601  T
Q  204 gctttggtgcaccgagctgccctttt 229  Q
    ||||| |||||||| | |||||||||    
T  36871602 gctttagtgcaccgggttgccctttt 36871627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 14544041 - 14544201
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta--aaaacagggtagggaaggctgcgtaaaatacacca 163  Q
    ||||||||||||||||||||||||| |  || |||||| || || ||||| | ||||||||||  |||||||||||    || ||||||  ||||  | |    
T  14544041 taaagttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctcttgtgtagaaaaacagggta----agactgcgtgcaataaccaa 14544136  T
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||| ||||||| || ||||||||    
T  14544137 aaaatggtcggaccccttccgggaccctgcgtatgcgggagctttagtgcaccaagttgcccttt 14544201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 17623542 - 17623700
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||| ||||| || | ||||||| |||||||| |||||   |||||||||||||| ||||||    ||||||||||| ||||||||      
T  17623542 taaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggt----aaggctgcgtacaatacacc-- 17623635  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||| ||||||||||| | |||||||||| || |||||| |||||| | | |||||||||    
T  17623636 aaatggtggaaccccttcccgaatcctgcgtatgtggaagctttagtgcactgggttgccctttt 17623700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 22371035 - 22371158
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||  | | ||||||| |||||||| ||||| | |||  ||||||||||||||||    |||||||||| |||||||||||    
T  22371035 taaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctc--gtgtaaaaacagggta----aggctgcgtacaatacaccaaa 22371128  T
Q  166 aatggtgggaccccttcccggaccctgcgtat 197  Q
      ||||||||||||||||||||||||| ||||    
T  22371129 --tggtgggaccccttcccggaccctgtgtat 22371158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 55 - 225
Target Start/End: Complemental strand, 4516519 - 4516354
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgta 153  Q
    |||||||| | |||||||||||||| |||||||||| | |||   | ||||| |||||||| | |||||||||||||| ||||| |    | ||||||||    
T  4516519 tggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaaacagggca----acgctgcgta 4516424  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 225  Q
     ||||||||||   ||||||||||||||||||||||||||||||| || |||||| ||| |||| |||||||    
T  4516423 caatacaccaat--tggtgggaccccttcccggaccctgcgtatgtggaagctttagtgtaccgggctgccc 4516354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 230
Target Start/End: Original strand, 44643489 - 44643660
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgt 152  Q
    |||||||||| |||||||||  |||||||||||||| | |||| || ||||| |||||||  | |||||  |||||||  ||| |||    |||||||||    
T  44643489 tggcgcaatggtaaagttgtcatcatgtgactgaaaggtcacgtgttcaagttctagaaagagcctcttccgtaaaaaaacagagta----aggctgcgt 44643584  T
Q  153 aaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    | |||  ||||||  ||||||||||||||||| ||||||||||||| |||||| || |||||||| ||||||||||||    
T  44643585 acaatgtaccaaa--tggtgggaccccttcccagaccctgcgtatgcgggagccttagtgcaccgggctgccctttta 44643660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 23488545 - 23488620
Alignment:
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||| |||||||||||||||||||||||||||||||||||| | ||||||| |||||||| | ||| ||||||    
T  23488545 aatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcgagagctttagtgcaccgggttgctctttta 23488620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 208
Target Start/End: Complemental strand, 99420 - 99285
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||| |||||||||| | ||||||| |||||||||||||| | |||||||  |||||||     || ||||||||||| ||||||||  |    
T  99420 taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgt-aaaaaaca----tggcaaggctgcgtacaatacacc--a 99328  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    |||||||| |||||||| | ||||||| ||||| |||||||||    
T  99327 aatggtggaaccccttctcagaccctgtgtatgcgggagcttt 99285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 208
Target Start/End: Complemental strand, 31158598 - 31158459
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | || ||||  ||||| |  |||| | |||||| ||||||| |||||||    ||  ||| || |||| |||||    
T  31158598 taaagttgttgtcatgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgcgtaaaaaacagggta----agattgcatacaataaaccaa 31158503  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  31158502 aaatggtgggaccccttcccagaccctgcgtatgcgggagcttt 31158459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 40762317 - 40762234
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    |||||| |||| |||||||||||  ||||||||||| |||| |||||||||||||| ||||||||| |||||||| | ||||||||    
T  40762317 aaggctacgtacaatacaccaaa--tggtgggaccctttcctggaccctgcgtatgtgggagctttagtgcaccgggttgcccttt 40762234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 228
Target Start/End: Complemental strand, 17380404 - 17380238
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 154  Q
    ||||||||||   |||||||||||||||||| |||| | ||||||| |||||| | |||||   |||||||||| |||||||||    |||| || ||      
T  17380404 tggcgcaatggcgaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaacagggt----aaggttgtgtgc 17380309  T
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||  ||||| ||| ||||||||| |||||||||| ||| ||||||||| |||||||| ||| ||||||    
T  17380308 aatacacc--aaatgatggaaccccttcctggaccctgcggatgcgggagcttt-gtgcaccgggcttcccttt 17380238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 29420046 - 29419945
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||  ||||||||| | |||| || |||||||| |||||   |||||||||||||| ||||||| | ||||||||||| ||||||||||    
T  29420046 taaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagtaaggctgcgtacaatacaccaa 29419947  T
Q  165 aa 166  Q
    ||    
T  29419946 aa 29419945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 5450263 - 5450384
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 163  Q
    ||||||||||||||||||||||||| | ||||||| ||| |||| |||||   ||||||||||||||  || ||||    |||||||||| ||||||||     
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggta----aggctgcgtacaatacacc- 5450357  T
Q  164 aaaatggtgggaccccttcccggaccct 191  Q
     ||| ||||||||||||||| |||||||    
T  5450358 -aaagggtgggaccccttcctggaccct 5450384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 24860143 - 24859999
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||| ||||||||||||||||| || |  ||||||  ||| ||| |||||   |||| ||||||||||| |||     |||||||||| ||||||||  |    
T  24860143 taaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctctggtgtaaaaacatggt-----aggctgcgtacaatacacc--a 24860051  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||| | |||||||| ||||||||||||||| ||||||||| ||||||||    
T  24860050 aatggtagaaccccttctcggaccctgcgtatgcgggagctttagtgcaccg 24859999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 25641487 - 25641625
Alignment:
Q  73 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtg 172  Q
    |||||||||||||||||| | ||||||| |||||||| ||||| |  | |||||| ||||||||||    || | |||||| ||||||||  |||| |||    
T  25641487 gttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcattttgtgtgaaaacagggt----aaagttgcgtacaatacacc--aaattgtg 25641580  T
Q  173 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||||||| | |||||||||| | ||||||| ||| ||||    
T  25641581 ggaccccttcccgaatcctgcgtatgcgagagctttagtgaaccg 25641625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 40579810 - 40579750
Alignment:
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||| | |||||||    
T  40579810 atggtgggaccccttcccggaccctgagtatgcgggagctttagtgcaccgggttgccctt 40579750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 216
Target Start/End: Original strand, 19614981 - 19615116
Alignment:
Q  77 tcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtggga 175  Q
    |||||||||||||| | ||||||| |||||||| |||||   ||||||| |||||| |||||||    || ||||||| |||| ||||| ||| |||| |    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggta----agactgcgtacaatataccaataatagtgg-a 19615075  T
Q  176 ccccttcccggaccctgcgtatgagggagctttggtgcacc 216  Q
    |||||||||| ||||||||||||  |||||||| |||||||    
T  19615076 ccccttcccgaaccctgcgtatgcaggagctttagtgcacc 19615116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 27573599 - 27573756
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||  ||| |||||||  | ||| | |||||||||| ||||| |||    ||||||||||| ||||||||  |    
T  27573599 taaagttgttgtcatgtgactgaaaggtcattggttcaagtccgggcaacagcctcttgtgtataaacatggt----aaggctgcgtacaatacacc--a 27573692  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||| |||  |||||  |||||| ||||| ||||||||| ||||| || | |||||||||    
T  27573693 aatggtggaaccatttcccaaaccctgtgtatgtgggagctttagtgcatcgggttgccctttt 27573756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 209
Target Start/End: Complemental strand, 32781456 - 32781307
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgta 153  Q
    |||||||||| |||||||||||  ||||  |||||| | |||| || ||||||   |||||   |||||||||||||| |||||||    || |||||||    
T  32781456 tggcgcaatggtaaagttgttgcaatgttgctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggta----agactgcgta 32781361  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 209  Q
     |||||||||||  ||||||||||||||||| ||||||| ||||| ||||||||||    
T  32781360 caatacaccaaa--tggtgggaccccttcccagaccctgtgtatgcgggagctttg 32781307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 39914463 - 39914304
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 163  Q
    |||||||||||||||||||||| || | ||||||  ||||| || |||||   ||||||||||||||  ||||||| |||    || ||| ||||||||     
T  39914463 taaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaaacagggtaagga----tgtgtacaatacaccg 39914368  T
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||  |||||||||||||||| | |||||||||||| ||||||||| ||||| || | ||||||||||    
T  39914367 aa--tggtgggaccccttcctg-accctgcgtatgcgggagctttagtgcatcgggttgccctttta 39914304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 225
Target Start/End: Complemental strand, 45235975 - 45235820
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 164  Q
    |||||||||| ||||||||||||||   |||| || |||||||||||||| ||||||| |||||||  |   ||||| |||||| |||  |||||||  |    
T  45235975 taaagttgttctcatgtgactgaaagatcacgagttcaagtcctagaaacagtctcttctgtaaaataa---tagggtaaggctacgtgtaatacac--a 45235881  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 225  Q
    ||||||||||||||||| || |||||| ||||||  |||||||| ||| ||| || |||||    
T  45235880 aaatggtgggaccccttaccagaccctacgtatgcaggagctttagtgtaccaagttgccc 45235820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 15296490 - 15296405
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||| |||| ||||||| | |||||| |||||| ||||||||||||||| || ||||||||||| ||  |||||||||||    
T  15296490 aaggctgcgtacaatataccaaaa-tagtgggatcccttctcggaccctgcgtatgtggaagctttggtgcgccaggctgccctttt 15296405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 209
Target Start/End: Original strand, 33795263 - 33795401
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgta-aaatacacca 163  Q
    |||||||||||||| |||| ||||| | ||||||| |||||||  |||||   |||||| ||||||| |||||||    |||||||||| |||||||||     
T  33795263 taaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggta----aggctgcgtacaaatacacct 33795358  T
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 209  Q
    |   ||||||||||||||||| ||||||| ||||| ||||||||||    
T  33795359 a---tggtgggaccccttcccagaccctgtgtatgcgggagctttg 33795401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 34080176 - 34080238
Alignment:
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |||||||||||||||||||||||||| |||| ||||| ||| |||||||| | ||||||||||    
T  34080176 tggtgggaccccttcccggaccctgcatatgcgggagttttagtgcaccgggttgccctttta 34080238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 34766330 - 34766376
Alignment:
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 214  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  34766330 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgca 34766376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 216
Target Start/End: Complemental strand, 19977869 - 19977726
Alignment:
Q  68 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaa 166  Q
    |||||||||||||||||| |||| | ||||||| ||||| || ||||| | ||||| ||||||||     ||||  |||| |||||| |||||||||||     
T  19977869 aagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaa----taggataaggttgcgtacaatacaccaaa- 19977775  T
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 216  Q
     |||||||| ||||||||| ||| || ||||| ||||||||| |||||||    
T  19977774 -tggtgggatcccttcccgaaccttgtgtatgcgggagctttagtgcacc 19977726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 24890463 - 24890533
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 215  Q
    |||||||| || ||||||||||   |||||||||||||||||||||||||||||||  |||||||| ||||||    
T  24890463 aaggctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcac 24890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 44449467 - 44449407
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggag 204  Q
    ||||||||||| |||||||||||| | |||||||||||||||||||||||||| || |||||    
T  44449467 aaggctgcgtacaatacaccaaaa-tagtgggaccccttcccggaccctgcgtttgtgggag 44449407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 44604832 - 44604905
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 139  Q
    |||||||||||||||||||||| || | ||| ||| |||||||| |||||   |||||||||||||||||||||    
T  44604832 taaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaacagggta 44604905  T

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Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 19185823 - 19185763
Alignment:
Q  148 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    |||||| ||| ||| ||||||||||| ||||||||| |||||||||||||| |||||||||    
T  19185823 tgcgtacaatgcacaaaaaatggtggaaccccttcctggaccctgcgtatgcgggagcttt 19185763  T

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Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 8575975 - 8576018
Alignment:
Q  173 ggaccccttcccggaccctgcgtatgagggagctttggtgcacc 216  Q
    |||||||||||||||||||||||||| ||||||||| |||||||    
T  8575975 ggaccccttcccggaccctgcgtatgtgggagctttagtgcacc 8576018  T

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Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 41409936 - 41409995
Alignment:
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 226  Q
    ||||||||||||||||||||||||||| |||| ||||||||  |||||||| | ||||||    
T  41409936 atggtgggaccccttcccggaccctgcatatgcgggagcttcagtgcaccgggttgccct 41409995  T

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Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 3633762 - 3633708
Alignment:
Q  174 gaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||||||||| || |||| ||||||||| |||||||||| ||||||||    
T  3633762 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgcccttt 3633708  T

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Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 22371199 - 22371249
Alignment:
Q  180 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  22371199 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 22371249  T

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Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 25632561 - 25632644
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||| |||||||||||  ||||||||  |||||||| ||| | |||||| ||||||||| |||||||| | ||||||||    
T  25632561 aaggctgcgtacaatacaccaaa--tggtgggattccttcccgaaccttacgtatgcgggagctttagtgcaccgggttgcccttt 25632644  T

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Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 24059057 - 24059016
Alignment:
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  24059057 atggtgggacccctttccggaccctgcgtatgtgggagcttt 24059016  T

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Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 17705473 - 17705537
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa 130  Q
    |||||||||||||||||||||  || | ||||||| |||||||| ||||| | ||||||||||||    
T  17705473 taaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaa 17705537  T

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Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 26684683 - 26684631
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||  |||||||    
T  26684683 aaatggtgggacctcttcccgaaccctgcgtatgcgggagctttaatgcaccg 26684631  T

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Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 124962 - 124925
Alignment:
Q  180 ttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  124962 ttcccggaccctgcgtatgcgggagctttagtgcaccg 124925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 23145855 - 23145736
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||   |||||||||| | ||||||| |||||| |  |||| | |||||||||||||| ||| |||    |||||||||| ||||||||||    
T  23145855 taaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgta----aggctgcgtacaatacaccaa 23145760  T
Q  165 aaatggtgggaccccttcccggaccc 190  Q
       ||||||||||| |||||||||||    
T  23145759 t--tggtgggaccctttcccggaccc 23145736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 23557645 - 23557526
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||   |||||||||| | ||||||| |||||| |  |||| | |||||||||||||| ||| |||    |||||||||| ||||||||||    
T  23557645 taaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgta----aggctgcgtacaatacaccaa 23557550  T
Q  165 aaatggtgggaccccttcccggaccc 190  Q
       ||||||||||| |||||||||||    
T  23557549 t--tggtgggaccctttcccggaccc 23557526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 760066 - 760114
Alignment:
Q  181 tcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||| |||||||||||| |||||||||||||||||  |||| ||||||    
T  760066 tcccgaaccctgcgtatgtgggagctttggtgcaccaggctgtcctttt 760114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 23053012 - 23052964
Alignment:
Q  181 tcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||| |||||||||||||  |||||||| |||||||| |||||||||||    
T  23053012 tcccagaccctgcgtatgcaggagcttttgtgcaccgggctgccctttt 23052964  T

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Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 67 - 230
Target Start/End: Complemental strand, 13628948 - 13628788
Alignment:
Q  67 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||| ||||||||||    |||||||||| ||||||||||     
T  13628948 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggta----aggctgcgtacaatacaccaat 13628853  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  13628852 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 13628788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 29366879 - 29366717
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||| ||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    |||||||||| ||||||||||    
T  29366879 taaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----aggctgcgtacaatacaccaa 29366784  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 231  Q
     ||||||||||||||||||||||||||||||||| ||||||||| |||||| | | |||||||||||    
T  29366783 taatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcactgggttgcccttttag 29366717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 26869707 - 26869864
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | |||| ||||||||||||||||    |||||||||| |||||||||||    
T  26869707 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaaaaacagggta----aggctgcgtacaatacaccaaa 26869802  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
      |||||||||||||| ||||||| |||||||| |||||||||||||||||| | |||||||||    
T  26869803 --tggtgggaccccttgccggaccatgcgtatgcgggagctttggtgcaccgggttgccctttt 26869864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 66 - 208
Target Start/End: Complemental strand, 46421194 - 46421055
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||| ||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  46421194 taaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 46421099  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
     ||||||||||||||||||||||||||||||||| |||||||||    
T  46421098 taatggtgggaccccttcccggaccctgcgtatgcgggagcttt 46421055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 13730761 - 13730601
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||| ||| ||||||||||    
T  13730761 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgtgtacaatacaccaa 13730666  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
     ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | |||||||||    
T  13730665 taatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 13730601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 208
Target Start/End: Complemental strand, 8247846 - 8247707
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||| |||||| ||||||||||    
T  8247846 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggttgcgtacaatacaccaa 8247751  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
     ||||||||||| ||||||||||||||||||||| |||||||||    
T  8247750 taatggtgggactccttcccggaccctgcgtatgcgggagcttt 8247707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 227
Target Start/End: Original strand, 22609755 - 22609921
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 154  Q
    |||||||| | |||||||||||||||||||||| || |  |||||| |||||| | ||||| | ||||||||||||||||||||    |||||||||||     
T  22609755 tggcgcaacggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtac 22609850  T
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
    ||||||||  ||||||||||||||||||||||||| |||||||| ||||||||  |||||||| | |||||||    
T  22609851 aatacacc--aaatggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgccctt 22609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 40272969 - 40272811
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | || |||| |||||||| |||||   |||||||||||||| |||||||    |||||||||| ||||||||||    
T  40272969 taaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 40272874  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  40272873 a--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 40272811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 34420801 - 34420642
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||| |||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||||||||||  |||||||||    
T  34420801 taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtaccatacaccaa 34420706  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    || |||||||||||||||||||||| |||||||| ||||||||| ||||||   |||||||||||    
T  34420705 aa-tggtgggaccccttcccggaccttgcgtatgtgggagctttagtgcacatggctgccctttt 34420642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 67 - 229
Target Start/End: Complemental strand, 5173876 - 5173718
Alignment:
Q  67 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 166  Q
    |||||||||||||||||||||||| | ||||||| |||||||| |||||   ||||||||||||||||  |||    ||| ||| |  ||||||||||||    
T  5173876 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaacaaagta----aggttgcatgcaatacaccaaaa 5173781  T
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||| |||||||||||||| |||||||| ||||||||| |||||||| | |||||||||    
T  5173780 atggtggggccccttcccggaccttgcgtatgcgggagctttagtgcaccgggttgccctttt 5173718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 16735441 - 16735599
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||||| |||| ||||||| |||||||| ||||| | |||||||  |||||||||||    ||||||||||| ||||||||  |    
T  16735441 taaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttgtagaaaaacagggt----aaggctgcgtacaatacacc--a 16735534  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||||||||||||||| ||||||||| || |||||  |||||| | | ||||||||||    
T  16735535 aatggtgggaccccttcccggacactgcgtatgcggtagcttcagtgcactgggttgccctttta 16735599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 39203516 - 39203671
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    ||| |||||| |||||||||||    
T  39203516 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgtaaaa-cagggta----aggttgcgtacaatacaccaaa 39203610  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
      |||||||||||||||||||||| ||| |||| ||||||||| |||||||| | ||||||||    
T  39203611 --tggtgggaccccttcccggaccttgcatatgcgggagctttagtgcaccgggttgcccttt 39203671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 22123072 - 22122918
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||| |||||||||||||||||||| | | ||||| |||||||| ||||| ||||||||||| ||||||||||    ||||||||||| ||||||||  |    
T  22123072 taaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--a 22122980  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
    |||||||||||||||||||||||||||| |||| | ||||| | |||||||| | |||||||    
T  22122979 aatggtgggaccccttcccggaccctgcatatgcgagagctctagtgcaccgggttgccctt 22122918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 229
Target Start/End: Original strand, 516417 - 516570
Alignment:
Q  74 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa-tggt 171  Q
    ||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||| | |||| |||||||| |||     
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgcacaataaaccaaaaaatggc 516512  T
Q  172 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||| ||||||||||||| ||||||||| |||||||| | |||||||||    
T  516513 gggaccccttccccgaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 516570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 226
Target Start/End: Original strand, 26573116 - 26573282
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgta 153  Q
    |||||||| | |||||||||||||| |||||||||| | ||||||| |||||||| ||||| | ||| ||||| |||||||||||    |||||||||||    
T  26573116 tggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggt----aaggctgcgta 26573211  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 226  Q
     ||||||||  || |||||||||||| |||||||||||||||||| | ||||||| |||||||  ||||||||    
T  26573212 caatacacc--aattggtgggaccccatcccggaccctgcgtatgcgtgagctttagtgcaccaggctgccct 26573282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 1217090 - 1217246
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||| ||||||| ||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||    
T  1217090 taaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 1217184  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
      ||| |||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  1217185 --tggcgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 1217246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 10795554 - 10795435
Alignment:
Q  94 cacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 192  Q
    ||||||| |||||||| ||||| | ||||||||||||| ||||||||    |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggta----aggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctg 10795459  T
Q  193 cgtatgagggagctttggtgcacc 216  Q
    |||||| ||||||||  |||||||    
T  10795458 cgtatgcgggagcttcagtgcacc 10795435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 53996723 - 53996564
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||| |||||||||| ||||||||| | |||| || |||||| | |||||   |||||||||||||| |||||||    ||||||| || ||||||||||    
T  53996723 taaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggta----aggctgcttacaatacaccaa 53996628  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    || ||||||||||||||||| ||| ||||||||| ||||||||| |||||||| |||||||||||    
T  53996627 aa-tggtgggaccccttccctgacactgcgtatgtgggagctttagtgcaccgggctgccctttt 53996564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 25944469 - 25944628
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||| |||||||||| | || |||| |||||||| ||||| | |||| |||||||||   ||   | ||||||| ||| |||||||||||    
T  25944469 taaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgg---gcaaggctgagtacaatacaccaaa 25944565  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    | ||||||||||||||||| ||||||||||||| ||||||||| | |||||  |||||||||||    
T  25944566 a-tggtgggaccccttccctgaccctgcgtatgtgggagctttagcgcaccaggctgccctttt 25944628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 45786299 - 45786214
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||||| |||||||| | ||||||||    
T  45786299 aaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagctttagtgcaccgggttgcccttt 45786214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 66 - 218
Target Start/End: Complemental strand, 6411978 - 6411832
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||| ||||| | | || |||| |||||| |  |||| | |||||||||||||||||||||    |||||||||| |||||||||||    
T  6411978 taaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa 6411883  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 218  Q
      || |||||||||||||| |||| |||||||| ||||||||| |||||||||    
T  6411882 --tgatgggaccccttcccagaccttgcgtatgcgggagctttagtgcaccga 6411832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 54484765 - 54484849
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  54484765 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 54484849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 208
Target Start/End: Original strand, 9607203 - 9607342
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||  ||| |||||||| ||||| | |||||| ||||||| |||||||    |||||||||| ||||||||||    
T  9607203 taaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggta----aggctgcgtagaatacaccaa 9607298  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
     |||| |||||||||||||| ||||| || |||| |||||||||    
T  9607299 taatgttgggaccccttcccagaccccgcatatgcgggagcttt 9607342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 353434 - 353351
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 226  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | ||||||    
T  353434 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccct 353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 217
Target Start/End: Original strand, 14986993 - 14987105
Alignment:
Q  102 caagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgag 200  Q
    |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||| ||||||||||||| |||||||||| ||| |||| |    
T  14986993 caagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcg 14987088  T
Q  201 ggagctttggtgcaccg 217  Q
    |||||||| ||||||||    
T  14987089 ggagctttagtgcaccg 14987105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 34771447 - 34771363
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | |||||||| |||||||||||    
T  34771447 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggctgccctttt 34771363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 52926367 - 52926218
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||            | ||||||||||| |||||||||||    
T  52926367 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta------------gtaaggctgcgtacaatacaccaaa 52926280  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
      ||||||||| ||||||||||||||||||||| ||||||||| | |||||| | |||||||||    
T  52926279 --tggtgggacaccttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctttt 52926218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 66 - 157
Target Start/End: Complemental strand, 10870108 - 10870021
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaat 157  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||||||||||    |||||||||||||||    
T  10870108 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtaaaat 10870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 209
Target Start/End: Complemental strand, 30928302 - 30928166
Alignment:
Q  68 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaa 166  Q
    ||||| ||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| || ||||    ||| || ||||||||||||||      
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggta----aggttgtgtaaaatacaccaat- 30928208  T
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagctttg 209  Q
     ||| |||||||||||||||||||||| |||| ||||||||||    
T  30928207 -tggcgggaccccttcccggaccctgcatatgtgggagctttg 30928166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 227
Target Start/End: Complemental strand, 45139624 - 45139479
Alignment:
Q  77 tcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaaatggtggga 175  Q
    |||||||||||||| | ||||||| |||||  | |||||   ||||||||||||| ||||||||    ||||||| || |||||||||||||||||||||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggta----aggctgcatacaatacaccaaaaatggtggga 45139529  T
Q  176 ccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
    ||||||||| || |||||||||| |||| |||| |||||||| |||||||||    
T  45139528 ccccttcccaga-cctgcgtatgcgggaacttt-gtgcaccgggctgccctt 45139479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 49013558 - 49013472
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || || | ||||||||| |||||||| | |||||||||    
T  49013558 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagctttagtgcaccgggttgccctttt 49013472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 228
Target Start/End: Original strand, 31592878 - 31593004
Alignment:
Q  95 acgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcg 194  Q
    |||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  ||||||||| ||||||||||||||||     
T  31592878 acgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtgggactccttcccggaccctgca 31592970  T
Q  195 tatgagggagctttggtgcaccgagctgcccttt 228  Q
    |||| ||||||| | |||||||| | ||||||||    
T  31592971 tatgcgggagctctagtgcaccgggttgcccttt 31593004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 7697042 - 7696903
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||| ||| | ||||||| |||||||| ||||| ||||||||||| ||||||||||    ||||||||||| ||||||||  |    
T  7697042 taaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--a 7696950  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||     ||||||||||||| |||| |||| ||||||| | ||||||||    
T  7696949 aatgg-----ccccttcccggacactgcatatgtgggagctctagtgcaccg 7696903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 15797294 - 15797378
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  15797294 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgccctttt 15797378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 25517251 - 25517167
Alignment:
Q  145 ggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 231  Q
    ||||||||| |||||||  |||||||||||||||||||||||| ||||||||||  |||||||| |||||||| | |||||||||||    
T  25517251 ggctgcgtacaatacac--aaaatggtgggaccccttcccggatcctgcgtatgctggagctttagtgcaccgggttgcccttttag 25517167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 12914192 - 12914032
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||| ||||||| |||| | |||  || |||||||| ||||| | |||||||||||||| |||||||    |||| ||||| ||||||||||    
T  12914192 taaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggcggcgtacaatacaccaa 12914097  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 231  Q
    |  ||||| ||||||||||| |||||||| |||| ||||||||   ||||||| | |||||||||||    
T  12914096 a--tggtgagaccccttcccagaccctgcatatgcgggagcttcaatgcaccgggttgcccttttag 12914032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 77 - 208
Target Start/End: Original strand, 33926094 - 33926220
Alignment:
Q  77 tcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggac 176  Q
    |||||||||||||| | || |||| |||||||| ||||  | ||||||||||||||||||||    ||||||| ||| |||||||| | |||||||||||    
T  33926094 tcatgtgactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaaaaacagggt----aaggctgtgtacaatacacc-ataatggtgggac 33926188  T
Q  177 cccttcccggaccctgcgtatgagggagcttt 208  Q
    ||||||| ||||||||| |||| | |||||||    
T  33926189 cccttcctggaccctgcatatgcgagagcttt 33926220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 47624095 - 47624167
Alignment:
Q  119 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtat 197  Q
    |||||||||||||||||||||    |||||||||| |||||||||||  ||||||||||||||||||||||||| ||||    
T  47624095 ctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgtgtat 47624167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 54374429 - 54374344
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||||||||| |||| ||||||||| || ||||  |||||| ||||    
T  54374429 aaggctgcgtacaatccaccaaaa-tggtgggaccccttcccggaccctgcatatgcgggagctttagttcaccaggctgccatttt 54374344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 829521 - 829453
Alignment:
Q  148 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||| |||||||||||| |||||||||||||||||| ||||||||||||  |||||||| ||||||||    
T  829521 tgcgtacaatacaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcaggagctttagtgcaccg 829453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 24851364 - 24851300
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||| |||||||| | |||||||||    
T  24851364 aaatggtgggaccccttcccggatcctgcatatgcgggagctttagtgcaccgggttgccctttt 24851300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 217
Target Start/End: Complemental strand, 45949009 - 45948849
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaa---acgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgc 150  Q
    |||||||| | | |||||||| |||||||||||||   | | ||||||| ||| |||| |||||   ||||||||||||||     ||||| ||||||||    
T  45949009 tggcgcaacggtgaagttgttttcatgtgactgaaggaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaa----tagggtaaggctgc 45948914  T
Q  151 gtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
     || ||||||||||   ||||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  45948913 atacaatacaccaat--tggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccg 45948849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 45620997 - 45620890
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta--aaaacagggtagggaaggctgcgt 152  Q
    |||||||| | |||||||||||||| |||||||||| | ||||||| ||||| || ||||| | ||||||||||  ||||||||||    ||||||||||    
T  45620997 tggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggt----aaggctgcgt 45620902  T
Q  153 aaaatacaccaa 164  Q
    | ||||||||||    
T  45620901 acaatacaccaa 45620890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 30452892 - 30452954
Alignment:
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  30452892 tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 30452954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 10484671 - 10484614
Alignment:
Q  173 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||| | ||||||||||    
T  10484671 ggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 10484614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 44403619 - 44403554
Alignment:
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||||||||||||||||| ||||||  | |||||| |||||||| |||||| ||||    
T  44403619 aaaatggtgggaccccttcccggaccctacgtatgctgaagctttagtgcaccgggctgccttttt 44403554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 55401254 - 55401330
Alignment:
Q  147 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcc 224  Q
    ||||||| |||||||||||| ||||||||||||||| |||||| | |||||| |||||||||  ||||||| ||||||    
T  55401254 ctgcgtataatacaccaaaa-tggtgggaccccttctcggaccttccgtatgcgggagcttttttgcaccgggctgcc 55401330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 215
Target Start/End: Original strand, 7942993 - 7943134
Alignment:
Q  69 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaa 167  Q
    ||||||||||||||||||| || | ||||| | |||||||| ||||| |  |||||| |||||| |||||||    || ||||||| |||||| ||||      
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggta----agactgcgtacaatacatcaaa-- 7943086  T
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 215  Q
    |||||||| ||||| || |||| |||||||| ||||||||| ||||||    
T  7943087 tggtgggatccctttccagaccatgcgtatgcgggagctttagtgcac 7943134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 207
Target Start/End: Original strand, 12525414 - 12525543
Alignment:
Q  73 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggt 171  Q
    |||||||| ||||||||| | ||| ||| | |||||| ||||| | |||||||||||||| |||||||    ||||||||  || |||||||||||||||    
T  12525414 gttgtcatatgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggta----aggctgcg--aagtacaccaaaaatggt 12525507  T
Q  172 gggaccccttcccggaccctgcgtatgagggagctt 207  Q
    ||||| ||||||  ||||||| ||||  ||||||||    
T  12525508 gggacaccttcctagaccctgtgtatacgggagctt 12525543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 40968611 - 40968677
Alignment:
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||| ||||||||||  |||||| | |||| ||||||||| ||||| |||||||||||||||    
T  40968611 aaaatggtgagaccccttcctagaccctacatatgcgggagctttagtgcatcgagctgccctttta 40968677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 53062038 - 53062112
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggta 139  Q
    ||||||||||||||||||||||||| | |||| || |||||||| ||||| | ||| ||||| ||||||||||||    
T  53062038 taaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctcctgtgtcaaaaacagggta 53062112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 4495821 - 4495714
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| ||||||||  |||  | || |||||| |||||||||||    ||||||||||| ||||||||      
T  4495821 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggt----aaggctgcgtacaatacacc-- 4495728  T
Q  165 aaatggtgggaccc 178  Q
    ||||||||||||||    
T  4495727 aaatggtgggaccc 4495714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 47624208 - 47624257
Alignment:
Q  180 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  47624208 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 47624257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 50625013 - 50624952
Alignment:
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||| |||||| || ||||||||| | ||||||||| |||||||| |||||||||||    
T  50625013 tggtgggacgccttcctgggccctgcgtaagtgggagctttagtgcaccgggctgccctttt 50624952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 45416986 - 45416932
Alignment:
Q  175 accccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||||||||||||||||  | |||||| |||||||| ||||||||||||    
T  45416986 accccttcccggaccctgcgtatgcagaagcttt-gtgcaccgggctgccctttta 45416932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 9276338 - 9276400
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    ||||||||||| |||||||||||  |||||| |||| ||||||||||||||||||| |||| ||||    
T  9276338 aaggctgcgtacaatacaccaaa--tggtgg-accctttcccggaccctgcgtatgcgggaacttt 9276400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 46170030 - 46169988
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctt 207  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||    
T  46170030 aaatggtaggaccccttcccggaccctgcatatgtgggagctt 46169988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 231
Target Start/End: Complemental strand, 54032614 - 54032568
Alignment:
Q  185 ggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 231  Q
    |||||||||||||| ||||||||| |||||||| | |||||||||||    
T  54032614 ggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttag 54032568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 35417905 - 35417982
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 132  Q
    |||||||| | |||||||||| |||||||||||| | | |||| || ||| |||| ||||| | ||||||||||||||    
T  35417905 tggcgcaacggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctcttgtgtaaaaa 35417982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 4495719 - 4495675
Alignment:
Q  185 ggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||| ||||||||| |||||||| | |||||||||    
T  4495719 ggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 4495675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 35417998 - 35418058
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 225  Q
    |||||||||||||||||||||||||| ||  ||| | ||||||| ||||| || |||||||    
T  35417998 aaatggtgggaccccttcccggaccccgcaaatgcgagagctttagtgcatcgggctgccc 35418058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 43956515 - 43956471
Alignment:
Q  185 ggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||| ||||||| ||||||||| |||||||| |||||||||||    
T  43956515 ggacccagcgtatgcgggagctttagtgcaccgggctgccctttt 43956471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 6e-43; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 38879559 - 38879720
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    |||||||||| ||||||||||    
T  38879559 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----aggctgcgtacaatacaccaa 38879654  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
     ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  38879655 taatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 38879720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 43334180 - 43334340
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 163  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||| ||||||||||  |||||||    |||||||||| |||||||||    
T  43334180 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggta----aggctgcgtacaatacacca 43334275  T
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| | |||||||||    
T  43334276 aaaatggtgggaccccttcccggaccctgcg-atgcgggagctttagtgcaccgggttgccctttt 43334340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 66 - 208
Target Start/End: Original strand, 27328730 - 27328869
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| |||||||||||||||| |||||||    |||||||||| ||||||||||    
T  27328730 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 27328825  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
     |||||||||||||||||||| |||||||||||| |||||||||    
T  27328826 taatggtgggaccccttcccgaaccctgcgtatgcgggagcttt 27328869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 41014297 - 41014455
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  |    
T  41014297 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--a 41014390  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |||||||||||||||||| |||||| || |||| ||||||||| |||||||| | ||||||||||    
T  41014391 aatggtgggaccccttcctggaccccgcatatgcgggagctttagtgcaccgggttgccctttta 41014455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 4619263 - 4619102
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||  | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  4619263 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 4619168  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
     ||||||||||||||||||||||||| || |||| | ||||||| |||||||| | ||||||||||    
T  4619167 taatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccgggttgccctttta 4619102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 24448868 - 24449026
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | || |||||||||||     ||||| ||||||||||| ||||||||||    
T  24448868 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaa----tagggtaaggctgcgtacaatacaccaa 24448963  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |  |||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||    
T  24448964 a--tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgggttgccctttt 24449026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 75 - 231
Target Start/End: Original strand, 32703411 - 32703560
Alignment:
Q  75 tgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtggg 174  Q
    |||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  |||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtggg 32703503  T
Q  175 accccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 231  Q
    ||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||||    
T  32703504 accccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttag 32703560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 8170139 - 8169983
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||| |||| | ||||||| |||||||| ||||| | || |||||||||| |||||||    |||||||||| |||||||||||    
T  8170139 taaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 8170045  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
      |||||||||||||||||||||||||| |||| ||||| ||  |||||||| | |||||||||    
T  8170044 --tggtgggaccccttcccggaccctgcatatgcgggagtttcagtgcaccgggttgccctttt 8169983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 229
Target Start/End: Complemental strand, 19143110 - 19142942
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 154  Q
    |||||||||| |||| ||||||||| |||||| ||| | ||| ||| |||||||| |||||   |||||||||||||||||||||    ||||||||||     
T  19143110 tggcgcaatggtaaaattgttgtcacgtgactaaaatgccacaggttcaagtcctggaaacaacctcttgtgtaaaaacagggta----aggctgcgtac 19143015  T
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    | |||||||||  |||||||||||||||||||||| |||||||| ||||| ||| |||||| |  ||||||||||    
T  19143014 agtacaccaaa--tggtgggaccccttcccggaccatgcgtatgcgggagatttagtgcactggcctgccctttt 19142942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 35710291 - 35710447
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||| ||||||| | ||||||| |||||||| ||||| | |||||||||||||  ||||||    |||||||||  |||||||||||    
T  35710291 taaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaat-agggta----aggctgcgttcaatacaccaaa 35710385  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
      |||||||||||||||||||| | ||| |||| ||||||| | |||||||| | |||||||||    
T  35710386 --tggtgggaccccttcccggaacatgcatatgcgggagctctagtgcaccgggttgccctttt 35710447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 12575739 - 12575660
Alignment:
Q  148 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||    
T  12575739 tgcgtacaatacaccaaaa-tggtgggaccccttcctggaccctgcgtatgcaggagctttggtgcaccgggctgcccttt 12575660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 217
Target Start/End: Original strand, 43574564 - 43574730
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacac---------gggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaa 144  Q
    ||||||||||||||||||||||||| |||||||||| | |||         | || |||||||| |||||  ||||||||||| |||||||||||    |    
T  43574564 tggcgcaatgataaagttgttgtcacgtgactgaaaggtcacttcggtcacgtgttcaagtcctggaaacaatctcttgtgtagaaaacagggta----a 43574659  T
Q  145 ggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||| |||| ||||||  ||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  43574660 ggctgcgtacaatataccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagagcaccg 43574730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 97 - 228
Target Start/End: Complemental strand, 13801895 - 13801767
Alignment:
Q  97 gggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgt 195  Q
    |||| |||||||| ||| | | |||||||||||||| |||||||    |||||||||| |||||||||| ||||||||||||||||||||||||| || |    
T  13801895 gggttcaagtcctggaagcagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcat 13801800  T
Q  196 atgagggagctttggtgcaccgagctgcccttt 228  Q
    ||| | ||||||| |||||||| | ||||||||    
T  13801799 atgcgagagctttagtgcaccgggttgcccttt 13801767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 217
Target Start/End: Original strand, 39301090 - 39301247
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgta 153  Q
    |||||||| | ||||||||||||||||| ||||||| | ||||||| |||||| | | |||   |||||||||| ||||||||||    |||| ||||||    
T  39301090 tggcgcaacggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgtataaaacagggt----aaggatgcgta 39301185  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
     ||| ||||||||| ||||||||||||||||||||||| |||||| ||||| ||| ||||||||    
T  39301186 taatgcaccaaaaa-ggtgggaccccttcccggaccctccgtatgtgggag-tttagtgcaccg 39301247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 214
Target Start/End: Original strand, 2838756 - 2838899
Alignment:
Q  66 taaagttgttgtcatgtgactg-aaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| ||| | |||| |  ||||||  |||||| |  ||||||||||||||||||||    |||||||||| ||||||||||    
T  2838756 taaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgtaaaaacagggta----aggctgcgtacaatacaccaa 2838851  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 214  Q
    |  |||||||| |||||| ||||||||||||||| |||||| | ||||||    
T  2838852 a--tggtgggatcccttctcggaccctgcgtatgcgggagcatcggtgca 2838899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 228
Target Start/End: Complemental strand, 7097863 - 7097760
Alignment:
Q  119 ctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 218  Q
    |||||||||||||||||||||    ||| |||||| |||||||||||  ||||| |||||||||||| |||||||||||| ||||||||| |||||||      
T  7097863 ctcttgtgtaaaaacagggta----aggttgcgtacaatacaccaaa--tggtgagaccccttcccgaaccctgcgtatgcgggagctttagtgcaccat 7097770  T
Q  219 gctgcccttt 228  Q
    ||||||||||    
T  7097769 gctgcccttt 7097760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 16957386 - 16957451
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  16957386 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 16957451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 25622524 - 25622584
Alignment:
Q  157 tacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  25622524 tacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccg 25622584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 209084 - 208925
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||| ||| | |||  || |||||||| | |||   |||||||||||||||||||||    ||||||| |  |||||||||||    
T  209084 taaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgtaaaaacagggta----aggctgcattcaatacaccaaa 208989  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    | |||||||||||||||| |||||||| |||||   ||||||| |||||||| || || ||||||    
T  208988 a-tggtgggaccccttcctggaccctgggtatgcaagagctttagtgcaccgggcggcactttta 208925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 230
Target Start/End: Original strand, 29334447 - 29334533
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||| ||||||||| || ||||||||||| ||||||||||||||||||| |||| ||||  ||||||| ||||||||||||    
T  29334447 aaggctgcgtacaatacaccagaa-tggtgggacccattcccggaccctgcgtatgtgggatctttaatgcaccgggctgccctttta 29334533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 22861826 - 22861667
Alignment:
Q  63 tgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacacc 162  Q
    |||||||||||||||||||||||||||| | ||||| | |||||||||||| | |||||||||||||||       | | ||| ||||  | |||||| |    
T  22861826 tgataaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttgtgtaaaa------caagtaagactgctcacaatacatc 22861733  T
Q  163 aaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
      |||||||||||||||||| || ||||||| |||| ||||||| | |||||||||  ||||||||||    
T  22861732 --aaatggtgggaccccttctcgaaccctgcatatgcgggagctctagtgcaccgaattgccctttta 22861667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 12006401 - 12006329
Alignment:
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
    |||||||||| ||||||||||||||||||| |||||||| |||| ||||||||| |||||||| | |||||||    
T  12006401 aatacaccaataatggtgggaccccttcccagaccctgcctatgcgggagctttagtgcaccgtgttgccctt 12006329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 20135656 - 20135740
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || ||||  |||||||  |||||||| | |||||||    
T  20135656 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcaggagcttcagtgcaccgggttgccctt 20135740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 208
Target Start/End: Original strand, 22600432 - 22600569
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||| ||||||||||| || |  |||||| |||||||| |||||  | | |||||||||| ||||||||    |||||| ||| ||||||||||    
T  22600432 taaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaacacagggta----aggctgtgtacaatacaccaa 22600527  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    |  |||||||| ||||||||||| |||||||||| |||||||||    
T  22600528 a--tggtgggatcccttcccggatcctgcgtatgcgggagcttt 22600569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 3771414 - 3771476
Alignment:
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||||||||||||| ||| ||||| ||||||||| |||||||| ||||||||||||    
T  3771414 tggtgggaccccttcccggactctgtgtatgtgggagctttagtgcaccgggctgccctttta 3771476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 217
Target Start/End: Original strand, 7368413 - 7368520
Alignment:
Q  103 aagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggg 202  Q
    ||||||| ||||| | ||||||||||||| |||||||    |||||||||| ||||||||||   |||||||||||||||||||||||||| |||| |||    
T  7368413 aagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaat--tggtgggaccccttcccggaccctgcatatgtggg 7368505  T
Q  203 agctttggtgcaccg 217  Q
    |||| | ||||||||    
T  7368506 agctctagtgcaccg 7368520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 12477204 - 12477119
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||  |||||||||   ||||||| ||||||| | ||||||||||    
T  12477204 aaggctgcgtacaatacaccaaaa-tggtgggaccccttcccggattctgcgtatgcaagagctttagtgcacccaactgccctttt 12477119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 34154897 - 34154814
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| || |||| | |||||||| | ||||||||    
T  34154897 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcggtagctctagtgcaccgggttgcccttt 34154814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 10306546 - 10306494
Alignment:
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  10306546 aatacaccaaaa-tggtgggaccccttcccggaccctgcgtatgcgggagcttt 10306494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 21784396 - 21784335
Alignment:
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 225  Q
    |||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||| |||||    
T  21784396 aaaatggtgggacccctttccggaccctgcgtatgcgggaggtttagtgcaccgagttgccc 21784335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 37024711 - 37024646
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa 131  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||    
T  37024711 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 37024646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 1565409 - 1565566
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | | ||||| |||||||| |||||   |||||| ||||||| |   ||   ||||||||||| ||| |||||||    
T  1565409 taaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaaaaaaaca-tatt-aaggctgcgtacaatgcaccaaa 1565506  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
      ||| |||||||||||||||||||||| |||| |||||| || |||||||| | ||||||||    
T  1565507 --tggcgggaccccttcccggaccctgcatatgtgggagc-ttagtgcaccgggttgcccttt 1565566  T

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Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 16880730 - 16880658
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||||| |||||||||||  ||||| |||| ||||||||||| |||||||| ||||||||| ||||||||    
T  16880730 aaggctgcgtacaatacaccaaa--tggtgtgaccacttcccggaccatgcgtatgcgggagctttagtgcaccg 16880658  T

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Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 28516591 - 28516432
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||| ||| |||||| | ||||||| |||||| | |||||   |||||||||| |||||||| |||    ||||||||| |||||| | |    
T  28516591 taaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctag----ggctgcgtacaatacatc-a 28516497  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||| ||||| ||||||||| |||  |||||||| ||| |||  | |||||||||    
T  28516496 aaatggtgggacccattcccagaccctgcgcatgcaggagctttagtggaccaggttgccctttt 28516432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 1850624 - 1850763
Alignment:
Q  72 tgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggt 171  Q
    ||||||||||||||||||| | ||||||| |||||||  ||||    |||||||||||||||||  ||    ||| |||||| |||||| ||||  ||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgtaaaaacagaata----agggtgcgtacaatacatcaaa--tggt 1850717  T
Q  172 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||| ||||| |||||||||| ||| || |||||| ||||||||    
T  1850718 gggaccacttcctggaccctgcggatgcggaagctttagtgcaccg 1850763  T

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Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 19093884 - 19093949
Alignment:
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||  ||||||| |||||||||||||||||  |||||||| |||||||| |||||||||||    
T  19093884 aaaatggtatgacccctacccggaccctgcgtatgttggagctttagtgcaccgggctgccctttt 19093949  T

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Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 23974747 - 23974824
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 132  Q
    |||||||| | |||||||||||||||||||||| || | ||||||| |||||||| |||||   ||||||||||||||    
T  23974747 tggcgcaacggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 23974824  T

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Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 16028683 - 16028623
Alignment:
Q  169 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  16028683 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 16028623  T

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Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 30877623 - 30877564
Alignment:
Q  169 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  30877623 ggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgcccttt 30877564  T

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Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 39801591 - 39801654
Alignment:
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttag 231  Q
    ||||||||||||||||| |||||| |||||| ||||||||| |||||||| | |||| ||||||    
T  39801591 tggtgggaccccttcccagaccctacgtatgcgggagctttagtgcaccgggttgccattttag 39801654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 11657783 - 11657698
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||| || |||||||||||| |||||||||||||||||| |||||||  | | |||| |||| || ||||| |||||||||||    
T  11657783 aaggctgcatacaatacaccaaaa-tggtgggaccccttcccgaaccctgcacacgcgggaactttagttcaccgggctgccctttt 11657698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 10943900 - 10943844
Alignment:
Q  172 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||||||  ||| ||||||||| |||||||| |||||||||||    
T  10943900 gggaccccttcccggaccctgca-atgcgggagctttagtgcaccgggctgccctttt 10943844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 21542530 - 21542489
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagct 206  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  21542530 aaatggtgggaccccttcccggactctgcgtatgcgggagct 21542489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 32354211 - 32354264
Alignment:
Q  177 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |||||||||||||||| ||||| ||||||||| |||||||| | ||||||||||    
T  32354211 cccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgccctttta 32354264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 180
Target Start/End: Complemental strand, 22908014 - 22907913
Alignment:
Q  73 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtg 172  Q
    ||||| |||||||||||| | || |||| ||||||| |||||| | ||||||||||||||||| ||    |||| ||| || ||||||||  ||||||||    
T  22908014 gttgttatgtgactgaaaggtcaagggttcaagtccaagaaacagcctcttgtgtaaaaacagagt----aaggttgcatacaatacacc--aaatggtg 22907921  T
Q  173 ggacccct 180  Q
    ||||||||    
T  22907920 ggacccct 22907913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 4654479 - 4654421
Alignment:
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctg 222  Q
    |||||||||||| |||||| || ||||||| |||| ||||||||| ||||||| |||||    
T  4654479 aaaatggtgggatcccttctcgaaccctgcatatgcgggagctttagtgcaccaagctg 4654421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 22187263 - 22187329
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 132  Q
    ||||||||||||||| ||||||||| | ||| |||  ||||||| ||||| | ||||||||||||||    
T  22187263 taaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaa 22187329  T

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Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 13774949 - 13774998
Alignment:
Q  177 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 226  Q
    ||||| |||||||||||||||| ||||||||| |||||||| ||| ||||    
T  13774949 ccctttccggaccctgcgtatgcgggagctttagtgcaccgggctaccct 13774998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 24903756 - 24903695
Alignment:
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||| ||||||||||||||| |||| || | |||| ||||||||||||| |||| ||||||    
T  24903756 tggtgagaccccttcccggacactgcatacgcgggaactttggtgcaccgggctgtcctttt 24903695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 28208269 - 28208240
Alignment:
Q  61 aatgataaagttgttgtcatgtgactgaaa 90  Q
    ||||||||||||||||||||||||||||||    
T  28208269 aatgataaagttgttgtcatgtgactgaaa 28208240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 39079823 - 39079755
Alignment:
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcc 224  Q
    |||||||||||| |||||||||||||||||||||| || ||||  ||||| ||| |||||| | ||||||    
T  39079823 aatacaccaaaa-tggtgggaccccttcccggaccatgtgtatacgggagttttagtgcacagggctgcc 39079755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 42924917 - 42924841
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccgg--accctgcgtatgagggagctttggtgcaccg 217  Q
    |||| |||||| ||||||||||||||| ||| | |||||||| |  |||||||||||| || |||||| ||||||||    
T  42924917 aaggttgcgtacaatacaccaaaaatgatggaatcccttcccagacaccctgcgtatgcggaagctttagtgcaccg 42924841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 10634314 - 10634254
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaac 115  Q
    |||||||| | | |||||||||||| |||||||||| | || |||| ||||||||||||||    
T  10634314 tggcgcaacggtgaagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaac 10634254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 12622224 - 12622192
Alignment:
Q  58 cgcaatgataaagttgttgtcatgtgactgaaa 90  Q
    |||||||||||||||||||||| ||||||||||    
T  12622224 cgcaatgataaagttgttgtcacgtgactgaaa 12622192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 24313645 - 24313570
Alignment:
Q  155 aatacaccaaaaatggtgggaccccttcccgg-accctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |||||||||||| |||||||||||||||||||  || || |||||  | |||||| |||||||| ||||||||||||    
T  24313645 aatacaccaaaa-tggtgggaccccttcccggcgccatgtgtatgctgtagctttagtgcaccgggctgccctttta 24313570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 24355982 - 24355907
Alignment:
Q  155 aatacaccaaaaatggtgggaccccttcccgg-accctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |||||||||||| |||||||||||||||||||  || || |||||  | |||||| |||||||| ||||||||||||    
T  24355982 aatacaccaaaa-tggtgggaccccttcccggcgccatgtgtatgctgtagctttagtgcaccgggctgccctttta 24355907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 30006397 - 30006449
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||||||||||||||||  |||  ||||| ||||||||| ||||||||    
T  30006397 aaatggtgggaccccttcccggggcctatgtatgcgggagctttagtgcaccg 30006449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 34074717 - 34074653
Alignment:
Q  68 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 132  Q
    ||||||||||||  ||||||||| | |||  || |||||||||||||| | ||||||||||||||    
T  34074717 aagttgttgtcacatgactgaaaggtcacaagttcaagtcctagaaacagcctcttgtgtaaaaa 34074653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 39079934 - 39079882
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtc 107  Q
    |||||||| | |||||||||||||||||||| |||| | ||||||| ||||||    
T  39079934 tggcgcaacggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtc 39079882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 29356009 - 29355854
Alignment:
Q  71 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatacaccaaaaatg 169  Q
    |||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||| ||||||||||    |||||||||| |||||||||| ||||    
T  29356009 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggta----aggctgcgtacaatacaccaataatg 29355914  T
Q  170 gtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  29355913 gtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 29355854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 12222074 - 12221913
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||||||| |||||| | ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  12222074 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 12221979  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagc-tttggtgcaccgagctgccctttt 229  Q
     ||||||||||||||||||||||||||||||||| |||||| ||| |||||||| | |||||||||    
T  12221978 taatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctttt 12221913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 9161101 - 9161260
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||||||| |||    |||||||||| |||||| |||     
T  9161101 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacagagta----aggctgcgtacaatacatcaat 9161196  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||| ||||||||||||||| || |||||| |||||||  | |||||||||    
T  9161197 aatggtgggaccccttctcggaccctgcgtatgcggaagctttagtgcaccaggttgccctttt 9161260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 1354912 - 1354755
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||    
T  1354912 taaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 1354818  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  1354817 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 1354755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 1346942 - 1347098
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | | ||||||||||| |||||||    |||||||||| |||||||||||    
T  1346942 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 1347036  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  1347037 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 1347098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 2166569 - 2166409
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||| |||||||||||| | ||||||| |||||||| |||||   ||||||||||||| ||||| ||    ||| |||||| ||||||||||    
T  2166569 taaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggata----aggttgcgtacaatacaccaa 2166474  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
     ||||||||||||||||||||||||||   |||  ||||||||| |||||||| | |||||||||    
T  2166473 taatggtgggaccccttcccggaccctatatattcgggagctttagtgcaccgggttgccctttt 2166409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 2178202 - 2178042
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||| |||||||||||| | ||||||| |||||||| |||||   ||||||||||||| ||||| ||    ||| |||||| ||||||||||    
T  2178202 taaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggata----aggttgcgtacaatacaccaa 2178107  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
     ||||||||||||||||||||||||||   |||  ||||||||| |||||||| | |||||||||    
T  2178106 taatggtgggaccccttcccggaccctatatattcgggagctttagtgcaccgggttgccctttt 2178042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 12885967 - 12886050
Alignment:
Q  147 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||| ||||||| |||||||||||||||||||||| ||||||||||||| ||||||||| |||||||| | ||||||||||    
T  12885967 ctgcgtacaatacacaaaaaatggtgggaccccttcccagaccctgcgtatgtgggagctttagtgcaccgggttgccctttta 12886050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 12892064 - 12892145
Alignment:
Q  148 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||| |||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | |||||||||    
T  12892064 tgcgtataatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 12892145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 225
Target Start/End: Complemental strand, 13905147 - 13904984
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgta 153  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||  ||||||||  |||||  |||||||||| ||||||||||    |||||||| ||    
T  13905147 tggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggt----aaggctgcata 13905052  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 225  Q
     ||| ||||  ||||||| |||||| |||||| ||||||||||| | |||||||| |||||||| |||||||    
T  13905051 caattcacc--aaatggt-ggaccctttcccgaaccctgcgtatcacggagcttt-gtgcaccgggctgccc 13904984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 7947455 - 7947371
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||| |||||||| ||||||||| ||||||   ||||||||||    
T  7947455 aaggctgcgtacaatacaccaaaa-tggtgggcccccttcccggaccttgcgtatgtgggagctttagtgcacttggctgcccttt 7947371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 3815234 - 3815088
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta-gggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | || |||||||||||     || || | | ||||||| ||||||||      
T  3815234 taaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaa----atatggtacgactgcgtacaatacacc-- 3815141  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||||||||||| |||||| ||||| |||||| || |||||| ||||||||    
T  3815140 aaatggtgggaccctttcccgaaccctacgtatgcggaagctttagtgcaccg 3815088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 6808468 - 6808531
Alignment:
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||||||||||| ||||| ||||||||| |||||||| | |||||||||    
T  6808468 aatggtgggaccccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgccctttt 6808531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 23930188 - 23930125
Alignment:
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |||||||||||||||| |||||||||| |||| ||||||||| |||||||||| ||||||||||    
T  23930188 atggtgggaccccttcacggaccctgcttatgcgggagctttagtgcaccgagttgccctttta 23930125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 3116202 - 3116140
Alignment:
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||||||||||||||||||||||||| |||||| |||||||| ||||||||| || |||||    
T  3116202 aatacaccaaaaatggtgggaccccttctcggaccttgcgtatgcgggagctttagtacaccg 3116140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 6024211 - 6024332
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||| || || | ||||| | ||| |||||||||| | |||||||||||||| || ||||    || ||||||| ||||||||||    
T  6024211 taaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggta----agactgcgtacaatacaccaa 6024306  T
Q  165 aaatggtgggaccccttcccggaccc 190  Q
     |||| ||||||| ||||||||||||    
T  6024307 taatgatgggacctcttcccggaccc 6024332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 10734965 - 10734905
Alignment:
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||| ||||||||||||||||||||||| ||||||||| || ||||| ||||||||||    
T  10734965 tggtgggcccccttcccggaccctgcgtatgcgggagctttagtccaccgggctgcccttt 10734905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 13267797 - 13267861
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||| |||||||||||||| ||||||||  |||||||| | |||||||||    
T  13267797 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccgggttgccctttt 13267861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 228
Target Start/End: Original strand, 17432332 - 17432483
Alignment:
Q  80 tgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggta--gggaaggctgcgtaaaatacaccaaaaatggtgggac 176  Q
    ||||||||||| | ||| ||| |||||||| |||||    |||||||| ||||||||||||  || ||||||| ||| ||||||| |||||||||| |||    
T  17432332 tgtgactgaaaggtcacaggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaagggtaaggctgtgtacaatacactaaaaatggtgagac 17432431  T
Q  177 cccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    |  |||||||| |||| | ||| ||||||||| |||||||| | ||||||||    
T  17432432 cttttcccggatcctgtgcatgcgggagctttagtgcaccgggttgcccttt 17432483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 26097210 - 26097294
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||| |||||||||||  ||  |||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  26097210 aaggctgcgtacaatacaccaaa--tgaagggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 26097294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 11395836 - 11395895
Alignment:
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    |||||||||||||||||||| |||||||||| ||||||||| || ||||| ||||||||||    
T  11395836 tggtgggaccccttcccggatcctgcgtatgcgggagctttagtccaccg-gctgcccttt 11395895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 206
Target Start/End: Original strand, 14553490 - 14553626
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||| ||| | ||| ||| |||||||| ||||  |  |||||||||||||     ||||| ||||||| ||| ||||||||||    
T  14553490 taaagttgttgtcatgtgact-aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaa----tagggtaaggctgtgtataatacaccaa 14553584  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagct 206  Q
    || |||||||||||||||   ||||||| ||||| |||||||    
T  14553585 aactggtgggaccccttcgtagaccctgtgtatgcgggagct 14553626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 24097649 - 24097692
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    |||||||||||||||||||||||||||||||||| || ||||||    
T  24097649 aaatggtgggaccccttcccggaccctgcgtatgcggaagcttt 24097692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 24734694 - 24734749
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 198  Q
    |||| |||||| |||||| |||||| ||||||||||||||||||| ||||||||||    
T  24734694 aaggttgcgtacaatacaacaaaaaaggtgggaccccttcccggatcctgcgtatg 24734749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 25557775 - 25557859
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||| |||||||||||  ||  || ||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  25557775 aaggctgcgtacaatacaccaaa--tgaaggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 25557859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 8409221 - 8409287
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 132  Q
    |||||||||||| |||||||||||| | ||||| | |||||||| ||||| | ||||||||||||||    
T  8409221 taaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaa 8409287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 14975163 - 14975101
Alignment:
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||||||| |||||||||||||||||||| |||| || |||| ||||| ||| ||||||||    
T  14975163 aatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagttttagtgcaccg 14975101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 14975237 - 14975171
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 132  Q
    |||||||||||||||||||||| || | ||||| | |||||||| ||||| | ||||||||||||||    
T  14975237 taaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaa 14975171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 15866194 - 15866041
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||| ||||||| ||||| | || |||| ||| |||| ||||| | |||||  || |||||||||||    || |||||||  ||||||||      
T  15866194 taaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctcttaagtaaaaaacagggt----aaagctgcgt--aatacacc-- 15866103  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 226  Q
    ||||||||||||||||||||||||||||||| || |||| || | |||||| ||| ||||||    
T  15866102 aaatggtgggaccccttcccggaccctgcgtttgcgggatctatagtgcactgagttgccct 15866041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 12063442 - 12063511
Alignment:
Q  63 tgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 132  Q
    ||||||||||||| ||||| |||||||| | ||||||| |||||||||||||  | ||||||| ||||||    
T  12063442 tgataaagttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctcttgtataaaaa 12063511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 32579497 - 32579540
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    |||||||||||||||||||| |||||||| |||| |||||||||    
T  32579497 aaatggtgggaccccttcccagaccctgcatatgcgggagcttt 32579540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 12889404 - 12889562
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||| |||| ||||| | ||| ||| |||||| |  |||| | ||||||||| |||||||||| |    ||||||| || |||||||| |    
T  12889404 taaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgttaaaaacagggca----aggctgcatacaatacaccta 12889499  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||  | ||||||||||| |||||||||  || || ||||||||| ||||| || ||||||||||    
T  12889500 aac-gatgggacccctttccggaccctctgtgtgtgggagctttagtgcatcgggctgcccttt 12889562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 33922985 - 33922935
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacg 116  Q
    ||||||||||||||| ||||||||| | ||| ||| |||||||||||||||    
T  33922985 taaagttgttgtcatttgactgaaaagtcacaggttcaagtcctagaaacg 33922935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 2755507 - 2755466
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttccc 184  Q
    ||||||||||| |||||||||||||||||||||  |||||||    
T  2755507 aaggctgcgtacaatacaccaaaaatggtgggagtccttccc 2755466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 383837 - 383760
Alignment:
Q  149 gcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||| |||||||||||  | ||||||||||||| | ||||||||||||| ||||||||  || ||||| | ||||||||    
T  383837 gcgtacaatacaccaaa--ttgtgggaccccttctcagaccctgcgtatgcgggagcttcagtccaccgggttgcccttt 383760  T

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Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 19649336 - 19649300
Alignment:
Q  55 tggcgcaa-tgataaagttgttgtcatgtgactgaaa 90  Q
    |||||||| ||||||||||||||||||||||||||||    
T  19649336 tggcgcaactgataaagttgttgtcatgtgactgaaa 19649300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 13160680 - 13160836
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||||| || | ||||||| |||||||||||||| | ||||||||||||||||||||    ||||||||||| ||||||||  |    
T  13160680 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--a 13160773  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||| ||| | ||||||||    
T  13160774 aatggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcgccgggttgcccttt 13160836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 39461153 - 39460992
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||| |||||||| | ||||||| |||||||| ||||| | |||||||||||||| ||| |||    |||||||||| ||||||||||    
T  39461153 taaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagta----aggctgcgtacaatacaccaa 39461058  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
     ||||||| ||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  39461057 taatggtgagaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 39460992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 21070859 - 21070708
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |     || ||||||||||| ||||||||||     
T  21070859 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaaggctgcgtacaatacaccaat 21070760  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  21070759 aatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccg 21070708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 20284230 - 20284080
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |    |||| ||||||||||| ||||||||||    
T  20284230 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaa--agggtaaggctgcgtacaatacaccaa 20284133  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
     ||||||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  20284132 taatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccg 20284080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 36720774 - 36720933
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  36720774 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 36720869  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |  ||||||||||||||||||||||||||||||| || |||||| |||||||  | ||||||||||    
T  36720870 a--tggtgggaccccttcccggaccctgcgtatgcggaagctttagtgcacccggttgccctttta 36720933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 28817783 - 28817625
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||| |    
T  28817783 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccca 28817688  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| ||||| || | |||||||||    
T  28817687 a--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcatcgggttgccctttt 28817625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 35261657 - 35261815
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| |||| ||| ||||| |||||||||||||||| |||||||    ||| |||||| ||||||||||    
T  35261657 taaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggta----aggttgcgtacaatacaccaa 35261752  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |  |||||||||||||||| |||||||||||||| ||||||||| |||||||| | |||||||||    
T  35261753 a--tggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 35261815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 12670405 - 12670261
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    ||||||||||| ||||||||  |    
T  12670405 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--a 12670313  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||||||||||||||||||||||||| |||| ||||||| | ||||||||    
T  12670312 aatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccg 12670261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 45071243 - 45071398
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||| || || | ||||||| ||||| || ||||| | |||||||||||||||||||||    |||||||||| |||||||||||    
T  45071243 taaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaacagggta----aggctgcgtacaatacaccaaa 45071338  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
      |||||||||||||||||||||| |||||||| ||||||||  |||||||| | |||||||    
T  45071339 --tggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgccctt 45071398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 7136686 - 7136538
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaac-agggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | || |||| |||||||| |||||   ||||||||||||||| ||||||    |||||||||| ||||||||||    
T  7136686 taaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggta----aggctgcgtacaatacaccaa 7136591  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
     ||||||||||||||||||||||||| || |||| ||||||||| ||||||||    
T  7136590 taatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccg 7136538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 30454252 - 30454096
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| || ||||    ||||||||||  ||||||||||    
T  30454252 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-caaggta----aggctgcgtacgatacaccaaa 30454158  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  30454157 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 30454096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 226
Target Start/End: Complemental strand, 44781674 - 44781506
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgta 153  Q
    |||||||| | |||||||||||||| ||||||||||   ||||||| |||||||| |||||   ||||||||||||| ||||||||    |||||| |||    
T  44781674 tggcgcaacggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggta----aggctgtgta 44781579  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 226  Q
     ||||||||||||||| ||||||||| |||| ||||||||||||| ||||||||| |||||| | ||||||||    
T  44781578 caatacaccaaaaatgttgggaccccgtcccagaccctgcgtatgcgggagctttagtgcactgtgctgccct 44781506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 66 - 209
Target Start/End: Complemental strand, 24365217 - 24365078
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 163  Q
    ||||||||||||||||||||| ||| | ||||||| |||| ||||||||| | ||||||||||||||  |||||||    |||||||| | |||||||||    
T  24365217 taaagttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggta----aggctgcgaacaatacacca 24365122  T
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 209  Q
    ||  ||||||||||||||||||||||||||||||| ||||||||||    
T  24365121 aa--tggtgggaccccttcccggaccctgcgtatgtgggagctttg 24365078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 6760800 - 6760960
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||| |||||  || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    ||||| |||| ||||||||||    
T  6760800 taaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggcttcgtacaatacaccaa 6760895  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
     ||||||||||||||||| ||||||| || |||| ||||||||| |||||||| | |||||||||    
T  6760896 taatggtgggaccccttctcggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 6760960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 68 - 217
Target Start/End: Complemental strand, 18164914 - 18164771
Alignment:
Q  68 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaa 167  Q
    ||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||||||||||||||    ||| |||||| |||||||||||      
T  18164914 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggta----aggttgcgtacaatacaccaaag- 18164820  T
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
     | || ||||  ||||||||||||||||||| ||||||||| ||||||||    
T  18164819 -gatgtgaccatttcccggaccctgcgtatgcgggagctttagtgcaccg 18164771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 55 - 217
Target Start/End: Complemental strand, 29521854 - 29521696
Alignment:
Q  55 tggcgcaa-tgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgt 152  Q
    |||||||| |||||||||||||||| |||||||| || | ||||||| |||||||| ||||| | ||||||| | |||||||||||    ||||||||||    
T  29521854 tggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggt----aaggctgcgt 29521759  T
Q  153 aaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    | ||||||||  ||||||||||| ||| |||| ||||||||||||| ||||||||| ||||||||    
T  29521758 acaatacacc--aaatggtgggaacccatcccagaccctgcgtatgcgggagctttagtgcaccg 29521696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 17823554 - 17823711
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||| |||| | ||||||| |||||||| ||||| | |||||||||||||| |||| |    ||| ||||||||||||||||      
T  17823554 taaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggat----aagactgcgtaaaatacacc-- 17823647  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||| ||||||||||| ||||||| ||||  |||||||| |||||||| | ||||||||    
T  17823648 aaatggtggaaccccttcccgaaccctgcatatgcaggagctttagtgcaccgggttgcccttt 17823711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 26954110 - 26954272
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 163  Q
    ||||||||||||||||||| |  || | ||||||| |||||||| ||||| | ||||||||||||||  |||||||    |||||||||| |||||||||    
T  26954110 taaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggta----aggctgcgtacaatacacca 26954205  T
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    | ||||||||||||||||||| ||||  || |||| ||||||||| |||||| | | ||||||||||    
T  26954206 ataatggtgggaccccttcccagacctcgcatatgcgggagctttagtgcactgggttgccctttta 26954272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 44530127 - 44530286
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||| ||||||||||||  || | ||||||| |||||| | |||||   |||||||||||||| |||||||    |||||||||| ||||||||||    
T  44530127 taaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 44530222  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |  |||||||||||||||| |||||||||||||| ||||||||| |||||||| | || |||||||    
T  44530223 a--tggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgacctttta 44530286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 20869941 - 20870061
Alignment:
Q  106 tcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggag 204  Q
    |||| ||||| |||||||||||||||| |||||||    |||||||||| |||||||||| |||||||||||||||||| |||||| || |||| |||||    
T  20869941 tcctggaaacagtctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggag 20870036  T
Q  205 ctttggtgcaccgagctgccctttt 229  Q
    |||| |||||||| | |||||||||    
T  20870037 ctttagtgcaccgggttgccctttt 20870061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 5135418 - 5135289
Alignment:
Q  94 cacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgc 193  Q
    ||||||| |||||||| ||||| | |||||||||||||| || |  || ||||||| ||| |||||||||||  ||||||||||||||||||||||||||    
T  5135418 cacgggttcaagtcctggaaacagcctcttgtgtaaaaa-agag--ggtaaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctgc 5135324  T
Q  194 gtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||  |||||||| |||||||| |||||||||||    
T  5135323 gtatgcaggagcttt-gtgcaccgggctgccctttt 5135289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 20869653 - 20869523
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    ||||||| ||| ||||||||||     
T  20869653 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgtgtacaatacaccaa- 20869560  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagc 205  Q
       |||| |||||||||||||||||||| |||| ||||||    
T  20869559 ---ggtgagaccccttcccggaccctgcatatgcgggagc 20869523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 216
Target Start/End: Original strand, 2626497 - 2626645
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||| |||| | ||||||| |||||||| ||||| | |||||||||||||| |     || ||| ||||||| |||||||||||    
T  2626497 taaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcgtacaatacaccaaa 2626596  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 216  Q
      || |||||||||||||| |||||||| |||| ||||||||  |||||||    
T  2626597 --tgatgggaccccttcccagaccctgcatatgcgggagcttcagtgcacc 2626645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 25250500 - 25250660
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaa-ggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | |||  || |||||||| ||||| | || |||||||||||     ||||| | ||||||||| ||||||||||    
T  25250500 taaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaa----tagggtatggctgcgtacaatacaccaa 25250595  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
     |||||||||||||||||||| |||| || |||| ||||| ||| |||||||| | |||||||||    
T  25250596 taatggtgggaccccttcccgaaccccgcatatgcgggagatttagtgcaccgggttgccctttt 25250660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 227
Target Start/End: Complemental strand, 42083867 - 42083699
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 154  Q
    |||||||| | |||| ||||||||| |||||||||| | ||||||| |||||||| ||||| | || |||||||||||  ||   || |||||||||||     
T  42083867 tggcgcaacggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatgg---ggcaaggctgcgtac 42083771  T
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
    | || ||| |||||||||||||||||||||| |||||| ||| | ||||||||| |||||  | |||||||||    
T  42083770 agtatacc-aaaatggtgggaccccttcccgaaccctgtgtacgtgggagctttagtgcattgggctgccctt 42083699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 208
Target Start/End: Original strand, 24245429 - 24245564
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacacc-aa 164  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| ||||||| |||   ||||||||    ||| || |||| ||| |||| ||    
T  24245429 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac-gtctcttatgt---aacagggt----aagactacgtacaatgcaccaaa 24245520  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    |||| |||||||||||||| |||||||||||||| |||||||||    
T  24245521 aaattgtgggaccccttcctggaccctgcgtatgcgggagcttt 24245564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 29877146 - 29877227
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 226  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||| || |||||||  ||||||||    
T  29877146 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagcgttagtgcaccaggctgccct 29877227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 12625867 - 12626027
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 163  Q
    ||||||||||||| |||||||   | | ||||||  |||||||| |||||   ||||||||||||||  |||||||    || |||| || |||||||||    
T  12625867 taaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggta----agactgcatacaatacacca 12625962  T
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||  |||||||||||| |||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  12625963 aa--tggtgggaccccctcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttta 12626027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 28407394 - 28407467
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 139  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||||||||||    
T  28407394 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggta 28407467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 8897921 - 8897763
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||| | || | |||||||  ||||||| |||||   | ||||||||||||     ||||| |||||| |||| ||||||||||    
T  8897921 taaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaa----tagggtaaggctacgtacaatacaccaa 8897826  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |  |||||||||||||||||||||||||| |||| |||||||||  ||||||  | |||||||||    
T  8897825 a--tggtgggaccccttcccggaccctgcatatgcgggagctttactgcacccggttgccctttt 8897763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 17250960 - 17250888
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 215  Q
    ||||| ||||| |||||||||| ||||||||||||| |||||| ||||||||||||| |||||||| ||||||    
T  17250960 aaggcagcgtacaatacaccaataatggtgggaccctttcccgaaccctgcgtatgaaggagctttagtgcac 17250888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 16225075 - 16225145
Alignment:
Q  147 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||| |||||||||| |||||||||| |||||||||||||| || |||| ||||||||| ||||||||    
T  16225075 ctgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggagctttagtgcaccg 16225145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 16013511 - 16013580
Alignment:
Q  148 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||| ||||||| |||||||||| ||||||||||| |||||||| |||| ||||||||| ||||||||    
T  16013511 tgcgtacaatacactaaaaatggtgcgaccccttcccagaccctgcctatgcgggagctttagtgcaccg 16013580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 40444845 - 40444902
Alignment:
Q  172 gggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||||    
T  40444845 gggaccccttgccggaccctgcgtatgttggagctttagtgcaccgagctgccctttt 40444902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 26102589 - 26102653
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  26102589 aaatggtgggaccccttcccggaccctgcttatgcgggagctctagtgcaccgggttgccctttt 26102653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 230
Target Start/End: Original strand, 31457155 - 31457309
Alignment:
Q  70 gttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatg 169  Q
    |||||||||||||| |||||| | ||||||| ||||||||  ||||   |||||||||||||| |||  |    |||||||||| |||||| ||||  ||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaaataggaaa----aggctgcgtacaatacatcaaa--tg 31457248  T
Q  170 gtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    || ||||||||||||  |||||||||||| ||||||| | ||||||||   ||||||||||    
T  31457249 gtaggaccccttcccaaaccctgcgtatgcgggagctctagtgcaccggattgccctttta 31457309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 5689683 - 5689755
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||||| |||||||||||  |||||| ||||||||||| ||| |||||||| ||||||||| ||||||||    
T  5689683 aaggctgcgtacaatacaccaaa--tggtggaaccccttcccgaaccatgcgtatgtgggagctttagtgcaccg 5689755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 28407475 - 28407538
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||||||||||||||||||| |||||| |||||||||  ||||||| | ||||||||    
T  28407475 aaatggtgggaccccttcccggaccctacgtatgcgggagctttactgcaccgggttgcccttt 28407538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 27507985 - 27508034
Alignment:
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  27507985 tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcaccg 27508034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 43942376 - 43942417
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttccc 184  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  43942376 aaggctgcgtacaatacaccaaaaatggtgggaccccttccc 43942417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 35107374 - 35107310
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||||||||||||| ||| ||||| || |||||| |||||||| | |||||||||    
T  35107374 aaatggtgggaccccttcccggacgctgtgtatgcggaagctttagtgcaccgggttgccctttt 35107310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 8484021 - 8483949
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||||| ||||||||||   |||||||||||| |||| ||||||||||||| ||||||||| | ||||||    
T  8484021 aaggctgcgtacaatacaccaat--tggtgggaccccatcccagaccctgcgtatgcgggagctttagggcaccg 8483949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 198
Target Start/End: Original strand, 11748282 - 11748406
Alignment:
Q  71 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatg 169  Q
    |||||||||||||||||||| | ||||||| |||||| | ||||| | ||||| |||||||| |||||||    || | ||||| |||| || |||||||    
T  11748282 ttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggta----agacagcgtacaatatacaaaaaatg 11748377  T
Q  170 gtgggaccccttcccggaccctgcgtatg 198  Q
    || ||||||||||||| | ||||| ||||    
T  11748378 gtaggaccccttcccgaatcctgcatatg 11748406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 187
Target Start/End: Complemental strand, 23000365 - 23000260
Alignment:
Q  74 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgg 173  Q
    ||||||||||||||||| | |||||||  ||||||| ||||| | |||||||||||||||| |||    |||| | | || ||||||||  |||||||||    
T  23000365 ttgtcatgtgactgaaaggtcacgggt--aagtcctggaaacagcctcttgtgtaaaaacacggt----aaggttccatacaatacacc--aaatggtgg 23000274  T
Q  174 gaccccttcccgga 187  Q
    ||||||||||||||    
T  23000273 gaccccttcccgga 23000260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 27468141 - 27468091
Alignment:
Q  179 cttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  27468141 cttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 27468091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 44742602 - 44742529
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||||| |||||||||||| |||||||||||||||  ||||||| || ||| |||||| || ||||||||    
T  44742602 aaggctgcgtacaatacaccaaaa-tggtgggaccccttcttggaccctacggatgcgggagcattagtgcaccg 44742529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 19729392 - 19729462
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 215  Q
    ||||||| ||| |||||||||||  |||||||||||||||||||||||||| |||  ||||||| | ||||||    
T  19729392 aaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatacgggagctctagtgcac 19729462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 35105902 - 35106022
Alignment:
Q  67 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 166  Q
    ||||||||||||| ||| |||||| | ||||||| |||||||| |||||   ||||||||| |||| || ||  | ||||||||||| |||||||| | |    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgt-aaaagagagt--gtaaggctgcgtacaatacacc-aga 35105997  T
Q  167 atggtgggaccccttcccggaccct 191  Q
    ||||||||||| ||||| |||||||    
T  35105998 atggtgggacctcttcctggaccct 35106022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 26457781 - 26457851
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||||| ||||||||||   |||||||||||||  || |||| |||||||||||||||||| ||||||||    
T  26457781 aaggctgcgtacaatacaccaat--tggtgggacccct--cctgaccttgcgtatgagggagctttagtgcaccg 26457851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 14018137 - 14018003
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgta 153  Q
    |||||||| | ||| |||||||||| |||| ||||| | || |||| |||||| | ||||| |||||||||||| ||||||||||     || |||||||    
T  14018137 tggcgcaacggtaatgttgttgtcacgtgattgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaaaacagggt----gagactgcgta 14018042  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgc 193  Q
     |||||| | ||| |||||||||| ||||| |||||||||    
T  14018041 caataca-ctaaattggtgggaccacttcctggaccctgc 14018003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 18595906 - 18595959
Alignment:
Q  161 ccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 214  Q
    ||||||||| | |||||||||||||||||||| ||||| ||||| ||| |||||    
T  18595906 ccaaaaatgataggaccccttcccggaccctgtgtatgcgggagttttagtgca 18595959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 30962929 - 30962864
Alignment:
Q  67 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 132  Q
    |||||||||||||||||| ||||| | ||||  | |||||||| ||||| | ||||||||||||||    
T  30962929 aaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaa 30962864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 389649 - 389769
Alignment:
Q  94 cacgggtccaagtcctagaaacggtctcttgtgt---aaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccc 190  Q
    ||||||| |||||||| |||||   |||||||||   ||||||||||||    ||| |||||| |||||||||||  || ||||| ||||| || |||||    
T  389649 cacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggta----aggttgcgtacaatacaccaaa--tgatgggatccctttcctgaccc 389742  T
Q  191 tgcgtatgagggagctttggtgcaccg 217  Q
    |||||||| | ||||||| ||||||||    
T  389743 tgcgtatgcgagagctttagtgcaccg 389769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 36486627 - 36486567
Alignment:
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
    ||||||||||| ||||||||||| ||||||||  |||||||| |||| ||| | |||||||    
T  36486627 atggtgggacctcttcccggaccttgcgtatgcaggagctttagtgccccgggttgccctt 36486567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 4e-38; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 30395885 - 30395724
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||  || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  30395885 taaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 30395790  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
     ||||||||||||||||||||||||| || |||| ||||||||| |||||||||| ||||||||||    
T  30395789 taatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgccctttta 30395724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 27201643 - 27201793
Alignment:
Q  61 aatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatac 159  Q
    |||| ||||||||||||||||||||||||| | || |||| |||||||| ||||| | ||||||||| | ||||||||||    |||||||||| |||||    
T  27201643 aatggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggta----aggctgcgtacaatac 27201738  T
Q  160 accaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 214  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||    
T  27201739 accaaaaatggtgggaccccttcccggaccttgcgtatgcgggagctttagtgca 27201793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 18944644 - 18944805
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||| ||| |||| ||| ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  18944644 taaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 18944739  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagc-tttggtgcaccgagctgccctttt 229  Q
     ||||||||||||||||||||||||||||||||| |||||| ||| |||||||| | |||||||||    
T  18944740 caatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctttt 18944805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 11596503 - 11596651
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 154  Q
    |||||||| | |||||| | |||||||||||||||| | ||||||| ||||||||||||||   ||||||||||||||||||||    |||||||||||     
T  11596503 tggcgcaacggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaaaaacagggt----aaggctgcgtat 11596598  T
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 209  Q
    ||||||||  ||||||||||||||||||| |||||||||||||| ||||||||||    
T  11596599 aatacacc--aaatggtgggaccccttcctggaccctgcgtatgcgggagctttg 11596651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 34725253 - 34725096
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| ||||||| |||    
T  34725253 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacactaaa 34725159  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  34725158 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 34725096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 46248110 - 46247952
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||||||| |||||| | ||||| | |||||||||||||| |||||||    || ||||||| ||||||||||    
T  46248110 taaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggta----agactgcgtacaatacaccaa 46248015  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| ||| |||| | |||||||||    
T  46248014 a--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccgggttgccctttt 46247952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 20004249 - 20004088
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||| ||||||||| || ||||    |||||||||| ||||||||||    
T  20004249 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggta----aggctgcgtacaatacaccaa 20004154  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
     ||||||||||||||||||| ||||| || |||| ||||||||| |||||||| | ||||||||||    
T  20004153 taatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttta 20004088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 27474282 - 27474440
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||| ||| |||||| | ||||| ||||||||||||||||||||| |    | |||||||| |||||||  ||    
T  27474282 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgtaaaaacagggca----aagctgcgtacaatacactgaa 27474377  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
      ||||||||||||||||||||||||||||||| ||||||||| ||||||||   ||||||||||    
T  27474378 --tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggattgccctttta 27474440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 230
Target Start/End: Original strand, 10668239 - 10668387
Alignment:
Q  79 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggacc 177  Q
    |||||||||||| | ||||||| |||||||| ||||| | |||||||||||||| || ||||    ||| |||||| |||||||||| ||||||||||||    
T  10668239 atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggta----aggttgcgtacaatacaccaataatggtgggacc 10668334  T
Q  178 ccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||| ||||||||||| ||||||||| |||||||| | ||||||||||    
T  10668335 ccttcccggtccctgcgtatgcgggagctttagtgcaccgggttgccctttta 10668387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 35117925 - 35117765
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||| |||||||||| | ||||||| |||||||| ||||  | ||||||||||||| ||||||||    |||||| ||| ||||||||||    
T  35117925 taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggta----aggctgtgtacaatacaccaa 35117830  T
Q  165 aaatggtgggaccccttcccggaccctgcgt-atgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||| ||||||||||||||||||||||||| |||  |||||||| |||||||| ||| ||||||    
T  35117829 aaatgatgggaccccttcccggaccctgcgtaatgcaggagctttagtgcaccgggcttcccttt 35117765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 38478437 - 38478281
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||| |||||||||||||||||||| | ||||||| |||||||||||||| | ||||||||| ||||||||||    ||||||||||| ||||||||  |    
T  38478437 taaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--a 38478345  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||| |||||||| |||||||||| |||| ||||||| | |||||||| | |||||||||    
T  38478344 aatggtggaaccccttctcggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 38478281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 66 - 216
Target Start/End: Complemental strand, 32632713 - 32632569
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||| ||||||||| | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  |    
T  32632713 taaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--a 32632620  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 216  Q
    |||||||||||||||||||  ||||||| |||| ||||||||  |||||||    
T  32632619 aatggtgggaccccttcccaaaccctgcatatgcgggagcttgagtgcacc 32632569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 230
Target Start/End: Original strand, 35005139 - 35005285
Alignment:
Q  81 gtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggacccc 179  Q
    |||||||||| | ||||||| |||||| |  |||| | |||||||||||||| |||||||    ||||||| || |||||||||||||||||||||||||    
T  35005139 gtgactgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggta----aggctgcatacaatacaccaaaaatggtgggacccc 35005234  T
Q  180 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||||||||||| ||| ||||| |||||||| | ||||||||||    
T  35005235 ttcccggaccctgcgtatgcgggcgctttagtgcaccgggttgccctttta 35005285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 217
Target Start/End: Original strand, 46991805 - 46991951
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| |||||||| |||||   |||||||||||||| |||||||    |||||| ||| |||||||| |    
T  46991805 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggctgtgtacaatacaccga 46991900  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  46991901 a--tggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccg 46991951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 55 - 225
Target Start/End: Complemental strand, 18724713 - 18724549
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgta 153  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||||| ||||||||||    ||||||| |||    
T  18724713 tggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggt----aaggctgtgta 18724618  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 225  Q
     ||||||||  ||||  ||||||||||||||||||||| | |||| ||||||||| ||||||| ||||||||    
T  18724617 caatacacc--aaatcttgggaccccttcccggaccctacatatgcgggagcttt-gtgcaccaagctgccc 18724549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 216
Target Start/End: Original strand, 47214512 - 47214655
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| ||||||||| | ||||||||||    |||| |||||| ||||||||  |    
T  47214512 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgt-ttaaaacagggt----aaggttgcgtacaatacacc--a 47214604  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 216  Q
    ||||||||||||||||||| |||||||| |||| ||||||| | |||||||    
T  47214605 aatggtgggaccccttcccagaccctgcatatgcgggagctctagtgcacc 47214655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 14617039 - 14617198
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaa-aacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | |||| || |||||||| ||||| | |||||||||||| ||||    ||| |||| |||||| ||||||||      
T  14617039 taaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataaca----aggtaaggttgcgtacaatacacc-- 14617132  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||| |||||||| | | ||||||||    
T  14617133 aaatggtgggatcccttcccggaccctgcatatgcgggagctttagtgcaccgggttaccctttta 14617198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 6925101 - 6925259
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||  | ||||||||||||||     ||||| ||||||||| | |||||||| |    
T  6925101 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaa----tagggtaaggctgcggacaatacaccga 6925196  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |  ||||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||| ||||    
T  6925197 a--tggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgagttgccttttt 6925259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 19414440 - 19414597
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||| ||||||||| | ||||||| |||||||||||||  | ||||| ||||||| |||| ||    |||||||||| |||||||||||    
T  19414440 taaagttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctcttatgtaaaa-caggtta----aggctgcgtacaatacaccaaa 19414534  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
      |||||||||||||||||| ||||||| |||| ||||||| | |||||||| | ||||||||||    
T  19414535 --tggtgggaccccttcccgtaccctgcatatgcgggagctctagtgcaccgggttgccctttta 19414597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 230
Target Start/End: Complemental strand, 6983977 - 6983809
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 154  Q
    |||||||||| |||||||||||||| |||||||||| | ||| ||| |||||||| ||||| | ||| | |  |||||||||||| | |    ||||||     
T  6983977 tggcgcaatggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcgtata-aaaaacagggtaagta----tgcgtac 6983883  T
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |||||||||||  |||||||||||||| |||||||||||||| |  ||||||||||||||||| ||||||||||||    
T  6983882 aatacaccaaa--tggtgggacccctttccggaccctgcgtaggcaggagctttggtgcaccgggctgccctttta 6983809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 18742118 - 18741968
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctag-aaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacc 162  Q
    ||||||||||||||||||||||||| | || |||| ||| || | | |||| |||| |||| ||||||  |||||||    |||||||||| ||||||||    
T  18742118 taaagttgttgtcatgtgactgaaaggtcaagggttcaaatcttgggaaacagtcttttgtataaaaaaacagggta----aggctgcgtacaatacacc 18742023  T
Q  163 aaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||||||||||||||||||| ||||||||||||| | ||||||| ||||||||    
T  18742022 aaaaatggtgggaccccttcccagaccctgcgtatgcgagagctttagtgcaccg 18741968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 214
Target Start/End: Complemental strand, 23768477 - 23768334
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||| ||| |||||| | ||||| | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  23768477 taaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 23768382  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 214  Q
    |  ||||||||| ||||||| ||||||||||||| ||||||||| |||||    
T  23768381 a--tggtgggacaccttcccagaccctgcgtatgcgggagctttagtgca 23768334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 67 - 230
Target Start/End: Original strand, 9939463 - 9939624
Alignment:
Q  67 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaa-aaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||||||| | |||| || |||||||| |||||   ||||||| ||| ||||| ||||    ||| |||||  |||||||||||    
T  9939463 aaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggta----aggttgcgtgcaatacaccaaa 9939558  T
Q  166 aatggtgggacccc-ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||| |||||||| | | ||||||||    
T  9939559 aatggtgggacccccttctcggaccctgcgtatgcgggagctttagtgcaccgggttaccctttta 9939624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 232
Target Start/End: Complemental strand, 41319963 - 41319802
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||| |||  ||||||| ||||| |||||||||||| ||||||||||    ||||||||||| ||||||||      
T  41319963 taaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggt----aaggctgcgtacaatacacc-- 41319870  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttttagg 232  Q
    ||||| ||||||||||||||| ||||| | |||| ||||| ||  |||||| | | ||||||||||||    
T  41319869 aaatgatgggaccccttcccgaacccttcatatgcgggagtttcagtgcactgggttgcccttttagg 41319802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 217
Target Start/End: Complemental strand, 45812704 - 45812548
Alignment:
Q  55 tggcgcaa-tgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgta 153  Q
    |||||||| |||||||||||||||||||||||||||| | ||| ||| ||||||||  |||| |||||||||||||||  ||||||    ||||||| ||    
T  45812704 tggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgtaaaag-agggta----aggctgcata 45812610  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
     |||||||||||  |||||||||||||||||  ||||||| |||| ||||||| | ||||||||    
T  45812609 caatacaccaaa--tggtgggaccccttcccaaaccctgcatatgcgggagctctagtgcaccg 45812548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 217
Target Start/End: Complemental strand, 2435955 - 2435797
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgta 153  Q
    |||||||| | |||||||||||||| |||||||||| | ||||||| |||||||| ||||| | ||| ||||| ||||| |||||    ||| |||||||    
T  2435955 tggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggt----aagcctgcgta 2435860  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
     |||||||| |||||||||||||||||| ||| ||||| || ||| ||||||||| ||||||||    
T  2435859 caatacacc-aaaatggtgggacccctttccgtaccctccgcatgcgggagctttagtgcaccg 2435797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 4349713 - 4349796
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  4349713 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 4349796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 217
Target Start/End: Complemental strand, 35253329 - 35253198
Alignment:
Q  79 atgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccc 178  Q
    ||||||||||||   ||||||| |||||||| ||||| | ||||||||||||| |||||||    |||||||||| |||||||||||  |||||||||||    
T  35253329 atgtgactgaaagatcacgggttcaagtcctcgaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtgggaccc 35253237  T
Q  179 cttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||||||||| |||| ||||||| | ||||||||    
T  35253236 cttcccggaccctgcatatgcgggagctctagtgcaccg 35253198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 42304292 - 42304218
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  42304292 aaggttgcgtacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccg 42304218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 217
Target Start/End: Original strand, 45402096 - 45402243
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaagg-ctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||| || || |  |||||| |||||||| ||||| | ||||||||||||||||||||    |||  ||||||| ||||||||||    
T  45402096 taaagttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggttc--aagttctgcgtacaatacaccaa 45402192  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |  ||||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  45402193 a--tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcaccg 45402243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 50606488 - 50606562
Alignment:
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| | |||||||||    
T  50606488 aatacaccaaaaatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttt 50606562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 229
Target Start/End: Original strand, 20036210 - 20036379
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaa 154  Q
    |||||||||| ||||||||||||||||||||||||| | ||||||| |||||||| |||||   |||||||||||| | |  |  || |||  |||||      
T  20036210 tggcgcaatggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaagagaaag--ggtaagattgcgttc 20036307  T
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||  |||| ||| |||||||| ||||| |||||    
T  20036308 aatacacc--aaatggtggaaccccttcccggaccctgcgtatgcaggag-ttttgtgcaccgggctgctctttt 20036379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 19932838 - 19932783
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 198  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19932838 aaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 19932783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 226
Target Start/End: Complemental strand, 15511319 - 15511150
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcg-- 151  Q
    |||||||||| |||||||||||| ||||| |||||| | |||   |  ||||||| ||||| | |||||||||||||| |||||||    ||||||||      
T  15511319 tggcgcaatggtaaagttgttgtaatgtggctgaaaggtcacatattgaagtcctggaaaccgcctcttgtgtaaaaaacagggta----aggctgcgga 15511224  T
Q  152 taaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 226  Q
    || |||||||||||| |||||| ||||||||| |||||||||||||| | ||||||| |||||||| ||||||||    
T  15511223 tacaatacaccaaaa-tggtggtaccccttcctggaccctgcgtatgtgtgagctttagtgcaccgggctgccct 15511150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 19701571 - 19701730
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||| ||||||||||| | |||||||  ||||| |  |||| | ||||||||||||||     | || |||| || ||| |||||||||||    
T  19701571 taaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaac---ttggtaaggatgggtacaatacaccaaa 19701667  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    | ||||||| ||||||||||||||||||||||| ||||||||| |||||||  ||| |||||||    
T  19701668 a-tggtggggccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctaccctttt 19701730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 97 - 226
Target Start/End: Original strand, 22324925 - 22325049
Alignment:
Q  97 gggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgta 196  Q
    |||| |||||| | ||||| | |||||||||||||||||||||    ||||||| || |||||||||||||||||||  |||| ||||| ||||||||||    
T  22324925 gggttcaagtcttggaaacagcctcttgtgtaaaaacagggta----aggctgcatacaatacaccaaaaatggtggagccccgtcccg-accctgcgta 22325019  T
Q  197 tgagggagctttggtgcaccgagctgccct 226  Q
    || ||||||||| |||||||  ||||||||    
T  22325020 tgcgggagctttagtgcaccaggctgccct 22325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 12126992 - 12126836
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||| | ||||| | |||||||  |||| || ||||| |  |||||||||||| |||||||    |||||||||| |||||||||||    
T  12126992 taaagttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 12126898  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
      | |||||||||||||||||||||||| |||| ||||||| | |||||| | | |||||||||    
T  12126897 --ttgtgggaccccttcccggaccctgcatatgcgggagctgtagtgcactgcgttgccctttt 12126836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 68 - 229
Target Start/End: Original strand, 8197046 - 8197202
Alignment:
Q  68 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaaa 166  Q
    ||||||||||||||||||||||| | ||||||| |||||||| | ||  | ||||||||| ||||||| |||    |||||| |||| | ||||||  ||    
T  8197046 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggt----aaggctacgtacagtacacc--aa 8197139  T
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||| |||||||||| |||||||||||||||  |||||||| ||| |||| | |||||||||    
T  8197140 atggtaggaccccttctcggaccctgcgtatgttggagctttagtgtaccgggttgccctttt 8197202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 31442473 - 31442400
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||| |||||| |||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  31442473 aaggatgcgtacaatacaccaaaa-tggtgggaccccttcccggacactgtgtatgtgggagctttggtgcaccg 31442400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 214
Target Start/End: Complemental strand, 17470503 - 17470361
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||| |||||||||  | || |||| |||||||||||||| | |||||||||| ||||||||||    ||||||||||| |||||||| |    
T  17470503 taaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggt----aaggctgcgtacaatacacc-a 17470409  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 214  Q
    |||| ||||||||| |||| |   |||||||||| ||||||||| |||||    
T  17470408 aaatagtgggacccgttcctg--acctgcgtatgtgggagctttagtgca 17470361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 25468420 - 25468285
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||| ||||| | || |||| |||||||| |||||   |||||||||||||| ||||||    |||| |||||| ||||||||      
T  25468420 taaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggt----aaggttgcgtacaatacacc-- 25468327  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagct 206  Q
    ||||||| ||||| |||||| ||||||||||||| |||||||    
T  25468326 aaatggttggacctcttcccagaccctgcgtatgcgggagct 25468285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 229
Target Start/End: Original strand, 50811929 - 50812099
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgt 152  Q
    |||||||| | |||||||||||||| |||||||||| | |||||   || ||||| ||||| |  |||||||||||||  |||||||    ||| |||||    
T  50811929 tggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaaacagggta----aggttgcgt 50812024  T
Q  153 aaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    | |||||||||||| |||||| |||||||||||  ||||||||||| |||||||||  ||||| | |||||||||||    
T  50812025 acaatacaccaaaa-tggtgg-accccttcccgcgccctgcgtatgcgggagctttaatgcactgggctgccctttt 50812099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 10378818 - 10378738
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 225  Q
    ||||||||||| |||||||||||  |||||||||||||||  ||||||||| |||| ||||||||| |||||||| |||||||    
T  10378818 aaggctgcgtacaatacaccaaa--tggtgggaccccttcttggaccctgcatatgcgggagctttagtgcaccgggctgccc 10378738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 15505643 - 15505722
Alignment:
Q  147 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||| |||||||||||  |||||||||||||||||| |||||||||||| ||||||||| ||||||||| ||||| ||||    
T  15505643 ctgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcgggagcttt-gtgcaccgaactgccttttt 15505722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 22930224 - 22930104
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | || |||| |||||||| ||||| | || |||||||||||||||||    |||| || | | ||||||||  |    
T  22930224 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgtaaaaacagggt----aaggttgtg-acaatacacc--a 22930132  T
Q  166 aatggtgggaccccttcccggaccctgc 193  Q
    |||||||||||||||||| |||||||||    
T  22930131 aatggtgggaccccttcctggaccctgc 22930104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 229
Target Start/End: Complemental strand, 31382330 - 31382213
Alignment:
Q  106 tcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagc 205  Q
    |||| ||||| | |||||||||||||||||| ||    |||||||||| |||||||||||  |||||||||||||||| ||||||||| |||| ||||||    
T  31382330 tcctggaaacagcctcttgtgtaaaaacaggata----aggctgcgtacaatacaccaaa--tggtgggaccccttcctggaccctgcatatgcgggagc 31382237  T
Q  206 tttggtgcaccgagctgccctttt 229  Q
    |||  || |||| | |||||||||    
T  31382236 tttactgtaccgggttgccctttt 31382213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 25290164 - 25290300
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaa--acggtctcttgtgt-aaaaacagggt-agggaaggctgcgtaaaatacac 161  Q
    ||||||||||||||||||||||||| | |||| || |||||| | |||  || | ||||||||| ||||||||||| ||| |||| || ||| |||||||    
T  25290164 taaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaacacagcctcttgtgtaaaaaacagggtaaggcaaggttgtgtacaatacac 25290263  T
Q  162 caaaaatggtgggaccccttcccggaccctgcgtatg 198  Q
    |||||||| | |||||||||||| ||| |||| ||||    
T  25290264 caaaaatgataggaccccttcccagactctgcatatg 25290300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 230
Target Start/End: Complemental strand, 20999933 - 20999848
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||| |||||||||||  || |||| |||||||| | |||||||||| | ||||||||| |||||||| ||||||||||||    
T  20999933 aaggctgcgtacaatacaccaaa--tgatggggccccttccggcaccctgcgtacgcgggagctttagtgcaccgggctgccctttta 20999848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 30555210 - 30555274
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||||||| ||||||||||||||| | ||||||| |||||||| |||| ||||||    
T  30555210 aaatggtgggaccccttcacggaccctgcgtatgcgagagctttagtgcaccgggctgacctttt 30555274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 33222985 - 33223093
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||| |  ||||| | ||||| | |||||||||||||||||    || |||| |||||| |||||||| ||    
T  33222985 taaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaaaaacag----ggaaaggttgcgtacaatacacc-aa 33223079  T
Q  166 aatggtgggacccc 179  Q
    ||||||||||||||    
T  33223080 aatggtgggacccc 33223093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 209
Target Start/End: Complemental strand, 44485266 - 44485128
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||| ||||| | |||||||   |||||| |||||   | ||||||||||| ||| ||||    |||||||||| ||||||||||    
T  44485266 taaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggta----aggctgcgtacaatacaccaa 44485171  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttg 209  Q
    |  |||| ||||||||||||||| ||| |||||| ||||||||||    
T  44485170 a--tggttggaccccttcccggatcctacgtatgcgggagctttg 44485128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 1517394 - 1517310
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||| ||||||||||   ||||||||||||||| | |||||||||||||  |||||||| |||||||| | |||||||||    
T  1517394 aaggctgcgtacaatacaccaat--tggtgggaccccttctcagaccctgcgtatgcaggagctttagtgcaccgggttgccctttt 1517310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 23796540 - 23796624
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||| |||||| |||||||||||  ||||| ||||||||||| |||||||| ||||  |||||||| |||||||| |||||||||||    
T  23796540 aaggttgcgtacaatacaccaaa--tggtgagaccccttcccagaccctgcatatgctggagctttagtgcaccgggctgccctttt 23796624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 43768214 - 43768298
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||| || ||||||||||   ||||||||||||||||| ||||||||||||  |||||||||  ||||||| |||||||||||    
T  43768214 aaggctgcctacaatacaccaat--tggtgggaccccttcccagaccctgcgtatacgggagctttaatgcaccgggctgccctttt 43768298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 33594191 - 33594129
Alignment:
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||||| | ||| ||||||||    
T  33594191 tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcactgggctaccctttta 33594129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 229
Target Start/End: Original strand, 22327101 - 22327255
Alignment:
Q  67 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||||||| | | ||||| |||||||| |||||   ||||||||| |||||||||||    ||||||| |||  || |||| ||    
T  22327101 aaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggt----aaggctgtgtacgatgcacc-aa 22327195  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||     |||||| || ||| ||||| |||||||||||||||||| |||||| ||||    
T  22327196 aatggtggg----gttcccgaactctgtgtatgcgggagctttggtgcaccgggctgccttttt 22327255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 4587626 - 4587574
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||||||||||||||||||||||| |||| ||||||||  ||||||||    
T  4587626 aaatggtgggaccccttcccggaccctgcctatgcgggagcttcagtgcaccg 4587574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 30682907 - 30682951
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttg 209  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||    
T  30682907 aaatggtgggaccccttcccggaccgtgcgtatgcgggagctttg 30682951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 230
Target Start/End: Complemental strand, 19974158 - 19974072
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |||| |||||| |||||||||||| || |||||||| ||||||||| ||  ||||| ||||||||| |||||| | ||||||||||||    
T  19974158 aaggttgcgtacaatacaccaaaa-tgatgggacccattcccggactctatgtatgcgggagctttagtgcacggggctgccctttta 19974072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 39215042 - 39214961
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 225  Q
    ||||||||||| ||||  |||||| ||||||| |||||||||  |||||||||||| || |||||| |||||||| |||||||    
T  39215042 aaggctgcgtacaatattccaaaa-tggtgggtccccttcccaaaccctgcgtatgtggaagctttagtgcaccgggctgccc 39214961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 45264471 - 45264411
Alignment:
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 216  Q
    |||||||||||| ||||||||||||||| | |||||||| |||| ||||||||| |||||||    
T  45264471 aatacaccaaaa-tggtgggaccccttctcagaccctgcatatgcgggagctttagtgcacc 45264411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 50760394 - 50760288
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgta 153  Q
    |||||||| | |||||| |||||||||||||||| | | ||||||| ||||||||  |||| | |||||||||| ||||| ||||    |||||||||||    
T  50760394 tggcgcaaaggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactgggt----aaggctgcgta 50760299  T
Q  154 aaatacaccaa 164  Q
     ||||||||||    
T  50760298 taatacaccaa 50760288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 6358199 - 6358250
Alignment:
Q  146 gctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 198  Q
    |||||||| || ||||||||| ||||||||||||||||| |||||||||||||    
T  6358199 gctgcgtacaaaacaccaaaa-tggtgggaccccttcccagaccctgcgtatg 6358250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 25554890 - 25554803
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg 142  Q
    |||||||||| |||||||||||||| |||||| ||| | |||| ||  ||||||| |||||   |||||||||| ||||| |||||||    
T  25554890 tggcgcaatggtaaagttgttgtcacgtgactaaaaggccacgtgtttaagtcctggaaacaacctcttgtgtagaaacacggtaggg 25554803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 35019305 - 35019388
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||| || ||||||||||   ||||||||||||| ||| ||||||||||||| | ||||||| |||||||| |||||| ||||    
T  35019305 aaggctgcatacaatacaccaat--tggtgggacccct-cccagaccctgcgtatgcgagagctttagtgcaccgggctgccatttt 35019388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 40424743 - 40424786
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcct 109  Q
    ||||||||||||||||||||||||| | ||||||| ||||||||    
T  40424743 taaagttgttgtcatgtgactgaaaggccacgggttcaagtcct 40424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 2436050 - 2435984
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 132  Q
    |||||||||||||| |||||||||| | ||||||| |||||||| |||||   ||| ||||||||||    
T  2436050 taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaa 2435984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 25554796 - 25554742
Alignment:
Q  174 gaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    |||||||||||| |||||||||||| |||||| || ||||||||  |||||||||    
T  25554796 gaccccttcccgaaccctgcgtatgcgggagcattagtgcaccggactgcccttt 25554742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 3060031 - 3060003
Alignment:
Q  170 gtgggaccccttcccggaccctgcgtatg 198  Q
    |||||||||||||||||||||||||||||    
T  3060031 gtgggaccccttcccggaccctgcgtatg 3060003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 16120819 - 16120875
Alignment:
Q  173 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||| |||||| |||| |||||||||  ||||||  |||||||||||    
T  16120819 ggaccccttcccggcccctgcatatgcgggagctttaatgcaccaggctgccctttt 16120875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 50760287 - 50760239
Alignment:
Q  181 tcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||| |||||||||||| |||||||||  ||||||| |||||||||||    
T  50760287 tcccgaaccctgcgtatgcgggagctttaatgcaccgggctgccctttt 50760239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 5648237 - 5648394
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  |    
T  5648237 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--a 5648330  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||||| | | |||||||||    
T  5648331 aatggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcactgggttgccctttt 5648394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 6430782 - 6430627
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| |||||| | ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  |    
T  6430782 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--a 6430689  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
    |||||||||||| |||||||||||||||||||| ||||||||| | |||||| | |||||||    
T  6430688 aatggtgggaccacttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctt 6430627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 16911540 - 16911701
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||| ||| | ||||||| |||||||||||||| | |||||||||| ||| |||||||    |||||||||| ||||||||||    
T  16911540 taaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggta----aggctgcgtacaatacaccaa 16911635  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
     ||||||||||||||||||||||||||||||| | ||||||||| ||  |||| | ||||||||||    
T  16911636 taatggtgggaccccttcccggaccctgcgtacgcgggagctttagtttaccgggttgccctttta 16911701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 55 - 229
Target Start/End: Original strand, 54175031 - 54175201
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaa-cggtctcttgtgtaaaaacagggtagggaaggctgcgta 153  Q
    |||||||| ||||| ||||||||||||||||||||| | ||||| | |||||||| |||| | | |||||||||||||||||||||    ||||||||||    
T  54175031 tggcgcaacgataa-gttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaaaaacagggta----aggctgcgta 54175125  T
Q  154 aaatacaccaaaaatggtgggaccccttccc-ggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
     |||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||| |||||||| |||||||||||    
T  54175126 caatacaccaaaa-tggtgggaccccttccccggaccctgcatatgcgggagctttagtgcaccgggctgccctttt 54175201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 44363289 - 44363130
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | |||| || ||||||||  |||| | ||| |||||||||| ||||||||||    ||||||| ||  ||||||    
T  44363289 taaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtaggg----ctgcgtacaacgcaccaa 44363194  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  44363193 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 44363130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 16408760 - 16408600
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| |||||||| ||||| | |||||||||||||| |||||||    || ||||||| ||||||||||    
T  16408760 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta----agactgcgtacaatacaccaa 16408665  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
     |||||||| |||||||||||||||| || |||| ||||||||| |||||||| | |||||||||    
T  16408664 taatggtggaaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 16408600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 30639358 - 30639515
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||| ||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||||||||||    ||||||||||| ||||||||  |    
T  30639358 taaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaaacagggt----aaggctgcgtacaatacacc--a 30639451  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||| |||||||||||||||||||| |||| ||||||||| |||||| | | |||||||||    
T  30639452 aatggtgagaccccttcccggaccctgcatatgcgggagctttagtgcactgggttgccctttt 30639515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 54730227 - 54730377
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||  ||| | ||||||| |||||||||||||| | |||||||||||||| |   ||||  ||||||||||| ||||||||||    
T  54730227 taaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaaa---taggataaggctgcgtataatacaccaa 54730323  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 218  Q
     |||| ||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  54730324 taatgatggaaccccttcccggaccctgcgtatgcgggagctttagtgcaccga 54730377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 30352748 - 30352579
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa------cagggtagggaaggctgcgtaaaatac 159  Q
    |||||||||||||| ||||| |||| | |||||||   |||||| ||||| | ||||||||||||||      ||||||| | || |||||||| |||||    
T  30352748 taaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttgtgtaaaaaaaaaaacagggtaagtaaagctgcgtacaatac 30352649  T
Q  160 accaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||| | |||||||||    
T  30352648 accaaaaatggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccgtgttgccctttt 30352579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 217
Target Start/End: Original strand, 40915807 - 40915952
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||||||||||||||  || | ||||||| |||||||| ||||| | ||||||||||||||||    ||| ||||||||||| ||||||||  |    
T  40915807 taaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaca----aggtaaggctgcgtacaatacacc--a 40915900  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||||||||| |||||||||||||||||||||| ||||||||  ||||||||    
T  40915901 aatggtgggagcccttcccggaccctgcgtatgcgggagcttcagtgcaccg 40915952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 47528685 - 47528529
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||| ||||||||||    ||||||||||| ||||||||  |    
T  47528685 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--a 47528593  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||||||||||||||||  |||| ||||||| | |||||||| | |||||||||    
T  47528592 aatggtgggaccccttcccggaccctgaatatgtgggagctctagtgcaccgggttgccctttt 47528529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 48598980 - 48598824
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    ||||||||||| ||||||||  |    
T  48598980 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggctgcgtacaatacacc--a 48598888  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||||||||||||| ||| ||||  |||||| | |||||||| | |||||||||    
T  48598887 aatggtgggaccccttcccggaccatgcatatgccggagctctagtgcaccgggttgccctttt 48598824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 20224962 - 20225117
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | || |||| |||||||| |||||   ||||||||||||| |||||||    |||||||||| |||||||||||    
T  20224962 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa 20225056  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||    
T  20225057 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 20225117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 5306820 - 5306694
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||| |||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||||||    |||| |||||| ||||||||  |    
T  5306820 taaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaatcagggt----aaggttgcgtacaatacacc--a 5306727  T
Q  166 aatggtgggaccccttcccggaccctgcgtatg 198  Q
    |||||||||||||||||||||||||||||||||    
T  5306726 aatggtgggaccccttcccggaccctgcgtatg 5306694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 23501771 - 23501925
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||||||| ||||||      || | |||||||||||||| |||||||    ||| |||||| ||||||||||    
T  23501771 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtc------acagcctcttgtgtaaaaaacagggta----aggttgcgtacaatacaccaa 23501860  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
     |||||||||||||||||||||||||||| |||| ||||||||| |||||||| | |||||||||    
T  23501861 taatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttt 23501925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 11054303 - 11054147
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| ||||||||  |||| ||||||||||| ||||||||||    ||| ||||||| ||||||||  |    
T  11054303 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgt-aaaacagggt----aagactgcgtacaatacacc--a 11054211  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||| || ||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  11054210 aatggcggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 11054147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 47482918 - 47482848
Alignment:
Q  160 accaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  47482918 accaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttggtgcaacgagctgccctttta 47482848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 20639777 - 20639657
Alignment:
Q  105 gtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgaggga 203  Q
    ||||| ||||| | |||||||||||||| |||||||    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaaaa-tggtgggaccccttcccggaccctgcgtatgcggga 20639683  T
Q  204 gctttggtgcaccgagctgccctttt 229  Q
    ||||| |||||||| | |||||||||    
T  20639682 gctttagtgcaccgggttgccctttt 20639657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 217
Target Start/End: Original strand, 21646942 - 21647090
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||| ||| |||||||| ||||| | ||||||||||||||     ||||| ||||||||||| |||| |||||    
T  21646942 taaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaa----tagggtaaggctgcgtacaatataccaa 21647037  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
     ||||||||||||||||||| ||||| || |||| ||||||||| ||||||||    
T  21647038 taatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 21647090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 35567148 - 35567306
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||| ||||||| | || |||| |||||| | ||||| | | |||||||||||| |||||||    |||||| ||| || |||||||    
T  35567148 taaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggta----aggctgtgtacaacacaccaa 35567243  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |  |||||||||||||||||| ||||||||| || ||||||||| |||||||| |||||||||||    
T  35567244 a--tggtgggaccccttcccgaaccctgcgtctgcgggagctttagtgcaccgggctgccctttt 35567306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 225
Target Start/End: Original strand, 25343154 - 25343321
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgta 153  Q
    |||||||||| |||||||||||||| |||||||| | | ||| ||| ||||| || ||||  |||||||||||||||| |||||||    ||||||||||    
T  25343154 tggcgcaatggtaaagttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggta----aggctgcgta 25343249  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 225  Q
     ||||||||||||| ||| |||||||||||  || |||||||||| | ||||||| | |||||  |||||||    
T  25343250 caatacaccaaaaagggttggaccccttcctagatcctgcgtatgtgagagctttagagcacccggctgccc 25343321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 226
Target Start/End: Complemental strand, 29208039 - 29207900
Alignment:
Q  80 tgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggacccc 179  Q
    ||||||||||| | ||||||| |||||||| ||||  | ||||||||||||| |||||||    |||||||||| |||||||||||  ||||||||||||    
T  29208039 tgtgactgaaaggtcacgggttcaagtcctggaaattgcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaaa--tggtgggacccc 29207947  T
Q  180 ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 226  Q
    |||||||||||||| |||| ||||||| | |||||||| | ||||||    
T  29207946 ttcccggaccctgcatatgcgggagctctagtgcaccgggttgccct 29207900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 68 - 208
Target Start/End: Complemental strand, 17043549 - 17043414
Alignment:
Q  68 aagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaaaa 166  Q
    |||||||||||| |||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| |||||||    ||||||||||| ||||||||  ||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggt----aaggctgcgtacaatacacc--aa 17043456  T
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    |||||||||||||||||| |||||||| ||||  ||||||||    
T  17043455 atggtgggaccccttcccagaccctgcatatgctggagcttt 17043414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 20225126 - 20225211
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||| | ||||||||    
T  20225126 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 20225211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 229
Target Start/End: Complemental strand, 9832469 - 9832312
Alignment:
Q  65 ataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||| ||||||| || ||||||||| | ||||||| ||||||||  |||| | ||||||||||||| |||||||    |||||||||| ||||||||||    
T  9832469 ataaaattgttgtgatctgactgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgtaaaa-cagggta----aggctgcgtacaatacaccaa 9832375  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |  |||||||||||||||||||||||||| ||||  ||| || | |||||||| | |||||||||    
T  9832374 a--tggtgggaccccttcccggaccctgcatatgcaggaactctagtgcaccgggttgccctttt 9832312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 217
Target Start/End: Original strand, 19027818 - 19027972
Alignment:
Q  58 cgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaa 156  Q
    ||||||| || ||||||||||| |||||||||| | ||||||| |||||||| |||||    |||||||| |||||||||||    ||||||||||| ||    
T  19027818 cgcaatggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggt----aaggctgcgtacaa 19027913  T
Q  157 tacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||  || |||||||||||||| || ||| ||||||||| ||||||||| ||||||||    
T  19027914 tacacc--aattggtgggacccctttccagactctgcgtatgtgggagctttagtgcaccg 19027972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 23580365 - 23580207
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||| |||||||||| | ||||||| ||||| |||||||  | |||||||||| |||||||    |||||| |||||||  ||||||| |    
T  23580365 taaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaaacag----gggaagactgcgtaggatacacc-a 23580271  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||| | |||||||||  ||| |||| ||||| ||||||||| ||||||||||||||||||||    
T  23580270 aaatggcgagaccccttcttgga-cctgtgtatgtgggagctttagtgcaccgagctgccctttt 23580207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 55 - 217
Target Start/End: Complemental strand, 47441698 - 47441541
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgta 153  Q
    |||||||| | |||||||||||||| |||||||||| | ||| ||| ||||||| |||||| ||||||| |||||||| ||||||    ||||||| |||    
T  47441698 tggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaatcagggt----aaggctgtgta 47441603  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
     ||||||||  ||||||| |||||||||||||||||||| ||| |  |||||||| || |||||    
T  47441602 caatacacc--aaatggttggaccccttcccggaccctgagtaagcaggagctttcgtccaccg 47441541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 20908720 - 20908635
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||| |||||||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||   |||||||||||    
T  20908720 aaggctgcgtacaatacaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcacaaggctgccctttt 20908635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 33836560 - 33836486
Alignment:
Q  155 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| || | |||||||||    
T  33836560 aatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggttgccctttt 33836486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 30690340 - 30690176
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaac---agggtaggg-aaggctgcgtaaaatacac 161  Q
    |||||| ||||||| |||||||||| | ||||||| |||||||| ||||  | ||||||||||||||    |    |||| |||||||| || |||||||    
T  30690340 taaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaaataaaaaacagggtaaggctgcatacaatacac 30690241  T
Q  162 caaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    |||   ||||||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||    
T  30690240 caat--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctgcccttt 30690176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 143 - 230
Target Start/End: Complemental strand, 51865121 - 51865036
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||| |||||||||||  ||||||| ||||||||||||||||||||||| |||||||||  |||||||  |||||||||||    
T  51865121 aaggctgcgtacaatacaccaaa--tggtggggccccttcccggaccctgcgtatgcgggagctttattgcaccggactgccctttta 51865036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 32478946 - 32478810
Alignment:
Q  62 atgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacac 161  Q
    |||||||||||||||||||||||| || | | ||| ||| |||||||| |||||   |||| ||||||||||||||||    ||||||     |||||||    
T  32478946 atgataaagttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctctagtgtaaaaacagggta----aggctg-----aatacac 32478856  T
Q  162 caaaaatggtgggaccccttcccggaccctgcgtatgagggagctttg 209  Q
    ||||  ||||||||||||||||||||||| ||||||| ||||||||||    
T  32478855 caaa--tggtgggaccccttcccggacccagcgtatgcgggagctttg 32478810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 227
Target Start/End: Complemental strand, 7909397 - 7909281
Alignment:
Q  106 tcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatg-agggag 204  Q
    |||| ||||| |||||||||||||||||||||||    ||| |||||| |||||||||||  |||||||||||||||||| ||||||||||||  |||||    
T  7909397 tcctggaaacagtctcttgtgtaaaaacagggta----aggttgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcggggag 7909304  T
Q  205 ctttggtgcaccgagctgccctt 227  Q
    |||| ||||| || | |||||||    
T  7909303 ctttagtgcatcgggttgccctt 7909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 13256554 - 13256398
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||  ||| |||||||| ||    | |||||||||||||| |||||||    |||||||||| ||||||||||    
T  13256554 taaagttgttgtcatgtgactggaaggtcataggttcaagtcctgga----gcctcttgtgtaaaaaacagggta----aggctgcgtacaatacaccaa 13256463  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
     ||| |||||||||||||||| |||| || | || ||||||||| |||||||| | |||||||||    
T  13256462 taatagtgggaccccttcccgaaccccgcatctgcgggagctttagtgcaccgggttgccctttt 13256398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 74 - 209
Target Start/End: Original strand, 25463108 - 25463238
Alignment:
Q  74 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtgg 173  Q
    ||||||||||||||||| | ||||||| |||||||| |||||   ||||||||||||||   || |   |||| |||||| || ||||||||  ||||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaactggga---aaggttgcgtacaacacaccaaa--tggtgg 25463202  T
Q  174 gaccccttcccggaccctgcgtatgagggagctttg 209  Q
    |||||||||||||||||||| |||| ||||||||||    
T  25463203 gaccccttcccggaccctgcatatgcgggagctttg 25463238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 38755970 - 38755908
Alignment:
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  38755970 aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 38755908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 47443963 - 47444093
Alignment:
Q  94 cacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctg 192  Q
    ||||||| |||||||| ||||| | |||||| ||||||| |||||||    |||||||||| |||||||||||  |||||||||||||||||||||||||    
T  47443963 cacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggta----aggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctg 47444056  T
Q  193 cgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    | ||||  |||||||  |||||| | | |||||||||    
T  47444057 catatgcaggagcttcagtgcactgggttgccctttt 47444093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 11394924 - 11394987
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| |||||||| | ||||||||    
T  11394924 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 11394987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 11404651 - 11404714
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| |||||||| | ||||||||    
T  11404651 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 11404714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 25629101 - 25629185
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||| ||| |||||||||||  |||||||||||||||||||||||| | |||| ||||||||| |||||||| | |||||||||    
T  25629101 aaggctgtgtacaatacaccaaa--tggtgggaccccttcccggaccctacatatgcgggagctttagtgcaccgggttgccctttt 25629185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 218
Target Start/End: Complemental strand, 30496476 - 30496332
Alignment:
Q  67 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 166  Q
    ||||||||||||| |||||||||| | |||| || |||||| | ||||| | |||||||||||| || |||||    ||||||| || |||||||||||     
T  30496476 aaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaaacac-gggta----aggctgcatacaatacaccaaa- 30496383  T
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccga 218  Q
     ||| ||||| |||||||||||| ||| ||||| |||||||| |||||||||    
T  30496382 -tggggggactccttcccggaccgtgcttatgatggagctttagtgcaccga 30496332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 49938746 - 49938613
Alignment:
Q  67 aaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaa 166  Q
    ||||||||||||| |||||||||| | ||| ||| |||||||| ||||| | ||||||||||||||| ||||| |       | ||| |||||||| |||    
T  49938746 aaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacggggtaag-------gtgtacaatacacc-aaa 49938655  T
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    ||||||||||||||||||  ||||||| |||| |||||||||    
T  49938654 atggtgggaccccttcccataccctgcatatgcgggagcttt 49938613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 32484307 - 32484369
Alignment:
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||||||||||| |||| ||||||||| |||||||| | |||||||||    
T  32484307 atggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttt 32484369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 14983906 - 14983971
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| |||  | ||||||||||    
T  14983906 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccatgttgccctttta 14983971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 40553998 - 40553937
Alignment:
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    |||||| ||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  40553998 atggtgtgaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 40553937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 49796849 - 49796911
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctt 207  Q
    ||||||||||| |||||||||||  |||||||||||||||||| |||||||||||| ||||||||    
T  49796849 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcgggagctt 49796911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 214
Target Start/End: Original strand, 20405071 - 20405210
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgtaaaatacacca 163  Q
    |||||||||||||||||||||| || | ||||||       ||||||||| | ||||||||||||||  |||||||    ||  |||||| ||||||| |    
T  20405071 taaagttgttgtcatgtgactggaaggtcacggg-------cctagaaacagcctcttgtgtaaaaaaacagggta----agattgcgtacaatacacta 20405159  T
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 214  Q
    | ||||||||||||||||||||||||| || |||| ||||||||| |||||    
T  20405160 ataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgca 20405210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 21489143 - 21489210
Alignment:
Q  147 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 215  Q
    ||||||| ||| |||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  21489143 ctgcgtacaatgcaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcgggagctttcgtgcac 21489210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 36816466 - 36816383
Alignment:
Q  145 ggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||| ||||||||||||| |||||||| |||||| |||||||| ||||| ||||||||| ||| |||| | |||||||||    
T  36816466 ggctgcgtacaatacaccaaaaa-ggtgggactccttcctggaccctgtgtatgcgggagctttagtgtaccgggttgccctttt 36816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 38786681 - 38786745
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  38786681 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 38786745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 217
Target Start/End: Complemental strand, 39077948 - 39077807
Alignment:
Q  69 agttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaat 168  Q
    |||||||||||||||| ||||| | ||||||| |||||||| ||||| | ||||||||| ||||||||||    |||| |||||| |||| |||  ||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggt----aaggttgcgtacaatatacc--aaat 39077856  T
Q  169 ggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    |||| |||  ||| ||||||||||| |||| ||||||| | ||||||||    
T  39077855 ggtgagacatctttccggaccctgcatatgcgggagctctagtgcaccg 39077807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 215
Target Start/End: Complemental strand, 41018945 - 41018807
Alignment:
Q  71 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatgg 170  Q
    ||||||||| |||||||||| | ||||||| |||||||| |||||   |||||||||||||  |||||    |||||| |||| ||||||||  |||| |    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaattagggt----aaggctacgtacaatacacc--aaatag 41018852  T
Q  171 tgggaccccttcccggaccctgcgtatgagggagctttggtgcac 215  Q
    |||||||||||||| |||| ||||||||  || ||||| ||||||    
T  41018851 tgggaccccttcccagaccttgcgtatggaggggctttagtgcac 41018807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 42164316 - 42164232
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 139  Q
    |||||||| | |||| |||||||||||||||||||| | ||||||| |||||| | |||||   |||||||||||||||||||||    
T  42164316 tggcgcaacggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaacagggta 42164232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 50555718 - 50555655
Alignment:
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||| ||||||||||||||||||||||||  |||| ||| |||||||| |||||||||||    
T  50555718 aatggtggaaccccttcccggaccctgcgtatgcaggagttttagtgcaccgggctgccctttt 50555655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 14590815 - 14590881
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 132  Q
    ||||||||||||||||||||||||| | ||||| | |||||||||||||| | ||||||| ||||||    
T  14590815 taaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaa 14590881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 25388249 - 25388311
Alignment:
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    |||||||||||||||||||||||||||||||||   ||||||| |||||||| | ||||||||    
T  25388249 aatggtgggaccccttcccggaccctgcgtatgcatgagctttagtgcaccgggttgcccttt 25388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 487292 - 487128
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgta-aaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | ||||||| |||||| | |||||   |||||||||| ||||||    ||| || |||||||| ||||||| ||    
T  487292 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaaca----aggtaaagctgcgtacaatacactaa 487197  T
Q  165 aa-------atggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccct 226  Q
    ||       |||| ||||||||||||||||  ||||| ||| ||||||||| |||||||| || |||||    
T  487196 aatggtgggatggcgggaccccttcccggattctgcgaatgcgggagctttagtgcaccgggcagccct 487128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 17315455 - 17315382
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggta 139  Q
    ||||||||||||||||||||||||| | ||||||| ||| |||| |||||   |||||||||||||||| ||||    
T  17315455 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgtaaaaacaaggta 17315382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 36589815 - 36589876
Alignment:
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 225  Q
    |||||||||||||||||||| | |||||  ||||| |||||||||||||||||| |||||||    
T  36589815 aaaatggtgggaccccttcctgaaccctatgtatgcgggagctttggtgcaccgggctgccc 36589876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 214
Target Start/End: Original strand, 37494829 - 37494972
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||| |||| |||||||| | ||| ||| |||||||| |||||   |||||||||||||| |||||||    ||| ||| || |||| |||||    
T  37494829 taaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta----aggttgcatacaatataccaa 37494924  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 214  Q
    |  |||||||||||||| | ||||||||||||||  |||||||| |||||    
T  37494925 a--tggtgggacccctttcgggaccctgcgtatgcaggagctttagtgca 37494972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 7385628 - 7385499
Alignment:
Q  71 ttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgtaaaatacaccaaaaatg 169  Q
    |||||||||||||||||||| | ||||||| |||| ||| ||||| | ||| ||||| ||||| |||||    |||| || ||  ||||||||  |||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggt----aaggttgtgtgcaatacacc--aaatg 7385535  T
Q  170 gtgggaccccttcccggaccctgcgtatgagggagc 205  Q
    ||||||||| ||||||||||||| ||||| ||||||    
T  7385534 gtgggaccctttcccggaccctgtgtatgcgggagc 7385499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 16494272 - 16494343
Alignment:
Q  146 gctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||| || |||||||||||||||||||||||| ||||| ||||||| ||||| || |||||| ||| ||||    
T  16494272 gctgcatacaatacaccaaaaatggtgggaccctttcccagaccctgtgtatgcggaagctttagtgtaccg 16494343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 208
Target Start/End: Complemental strand, 30581635 - 30581485
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa--cagggtagggaaggctgcgt 152  Q
    |||||||| | ||||||||||||||  | ||| ||| | || |||| |||||| | |||||   ||||||||||||||  |||||||    ||| || ||    
T  30581635 tggcgcaacgctaaagttgttgtcacatcactaaaaggtcaagggttcaagtcgtggaaacaacctcttgtgtaaaaaaacagggta----agggtgtgt 30581540  T
Q  153 aaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    | |||||||||||| |||||||||||||||||||||||||| ||||  ||||||||    
T  30581539 acaatacaccaaaa-tggtgggaccccttcccggaccctgcatatgtaggagcttt 30581485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 35532077 - 35532128
Alignment:
Q  178 ccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  35532077 ccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 35532128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 225
Target Start/End: Original strand, 54966988 - 54967151
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgta 153  Q
    |||||||| | ||||||||||||||||||||||||| | |||  || ||||| || ||||    |||||||||||||| |||||||    ||| ||| ||    
T  54966988 tggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaacagggta----aggttgc-ta 54967082  T
Q  154 aaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccc 225  Q
     |||| ||||||  |||||||||||||||||| ||||| | |||| ||||||||| |||||||| |||||||    
T  54967083 caatataccaaa--tggtgggaccccttcccgtaccctacatatgcgggagcttt-gtgcaccgggctgccc 54967151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 55766623 - 55766466
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacac-gggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||| | || | ||| |||| |||||  | ||||| || ||||||||  |||||||||    ||||||||||| |||||||       
T  55766623 taaagttgttgtcatgtgaccggaaggtcacggggttcaagttttggaaacagtttcttgtgtgtaaacagggt----aaggctgcgtacaatacac--t 55766530  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
     |||||||| ||||| ||||||||| |||||||| | ||||||| |||||||| | ||||||||    
T  55766529 gaatggtggaaccccatcccggaccttgcgtatgcgagagctttagtgcaccgggatgcccttt 55766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 209
Target Start/End: Complemental strand, 3580993 - 3580859
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaac-agggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | |||| || |||||| | |||||   ||||||||||||||| | ||||    |||||| ||  ||||||||||    
T  3580993 taaagttgttgtcatgtgactgaaaagtcacgagttcaagtc-tggaaac---ctcttgtgtaaaaaccatggta----aggctgtgtgcaatacaccaa 3580902  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttg 209  Q
    |  || | ||||||||||||||||||||| |||| ||||||||||    
T  3580901 a--tgctaggaccccttcccggaccctgcatatgtgggagctttg 3580859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 32629418 - 32629293
Alignment:
Q  73 gttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggtg 172  Q
    |||||||||||||||||| | ||||||| ||| |||| ||||| | |||||||  |||||||||||    ||||| || | | ||||||| ||| ||| |    
T  32629418 gttgtcatgtgactgaaaggtcacgggttcaaatcctcgaaacagcctcttgtaaaaaaacagggt----aaggccgcct-acatacacc-aaattggcg 32629325  T
Q  173 ggaccccttcccggaccctgcgtatgagggag 204  Q
    ||||||||||||||||| |||||||| |||||    
T  32629324 ggaccccttcccggaccttgcgtatgtgggag 32629293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 208
Target Start/End: Complemental strand, 39029218 - 39029080
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||| ||||||| ||| | ||  ||| |||| | | ||||| | |||||||||||||| |||||||    |||||| ||| ||||||| ||    
T  39029218 taaagttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaaacagggta----aggctgtgtacaatacacgaa 39029123  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    || |||||||||| ||| ||||||||||| |||| |||||||||    
T  39029122 aa-tggtgggaccactttccggaccctgcatatgcgggagcttt 39029080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 19027986 - 19028047
Alignment:
Q  168 tggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    ||||||||| |||||||||||||  | |||| ||||||||| |||||||| |||||||||||    
T  19027986 tggtgggactccttcccggaccccacttatgcgggagctttagtgcaccgggctgccctttt 19028047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 44718641 - 44718682
Alignment:
Q  167 atggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  44718641 atggtgggaccccttcccagaccctgcgtatgcgggagcttt 44718682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 28494223 - 28494287
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||||||||||||||| || ||||| |||| ||||||| | |||||||| |||||| ||||    
T  28494223 aaatggtgggaccccttcccagatcctgcatatgcgggagctctagtgcaccgggctgccttttt 28494287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 8473705 - 8473621
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggacccctt-cccgga-ccctgcgtatgagggagctttggtgcaccgagctgccctt 227  Q
    |||||||| || |||||||||||  |||||||||||||| |||||| |||||| |||| ||||||||| |||||||| | |||||||    
T  8473705 aaggctgcatacaatacaccaaa--tggtgggaccccttccccggacccctgcatatgcgggagctttagtgcaccgggttgccctt 8473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 9987917 - 9987833
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |||||||| || |||||||||||  ||||||||||||||||  |||| ||| |||| |||||||||  ||||||| |||||| ||||    
T  9987917 aaggctgcatacaatacaccaaa--tggtgggaccccttccttgaccttgcatatgcgggagctttaatgcaccgggctgccttttt 9987833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 230
Target Start/End: Original strand, 7038041 - 7038189
Alignment:
Q  76 gtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaaaaatggtggg 174  Q
    ||||||||||||||| | ||| ||| |||||||| ||||| |  |||||||||||||     ||||| ||| || |||| |||||||||||| |||||||    
T  7038041 gtcatgtgactgaaaggtcacaggttcaagtcct-gaaacagcttcttgtgtaaaaaa----tagggtaagacttcgtacaatacaccaaaa-tggtggg 7038134  T
Q  175 accccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
     | ||| |||||||||||||||| | |||||||| |||||| | | ||||||||||    
T  7038135 gcacctacccggaccctgcgtat-acggagctttagtgcactgggttgccctttta 7038189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 2813181 - 2813242
Alignment:
Q  147 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    ||||||| |||||| ||| ||||||||||||| |||||| ||  |||||||| |||||||||    
T  2813181 ctgcgtacaatacatcaataatggtgggaccctttcccgaacgatgcgtatgcgggagcttt 2813242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 35894540 - 35894492
Alignment:
Q  148 tgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtat 197  Q
    |||||| |||||||||||| |||||||||||||||||||| | |||||||    
T  35894540 tgcgtacaatacaccaaaa-tggtgggaccccttcccggatcatgcgtat 35894492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 54640507 - 54640430
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 132  Q
    |||||||| | |||| ||||||||| ||| |||||| | ||||||| |||||| | ||||| | ||||||||||||||    
T  54640507 tggcgcaacggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaa 54640430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 8820581 - 8820613
Alignment:
Q  166 aatggtgggaccccttcccggaccctgcgtatg 198  Q
    ||||||||||||||||||| |||||||||||||    
T  8820581 aatggtgggaccccttcccagaccctgcgtatg 8820613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 50856404 - 50856344
Alignment:
Q  55 tggcgcaatgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaac 115  Q
    |||||||| | ||||||||||||||  ||| ||||| | ||||||| ||||||||||||||    
T  50856404 tggcgcaacggtaaagttgttgtcacatgattgaaaggtcacgggttcaagtcctagaaac 50856344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 30557 - 30713
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | ||||||||||||| ||||||||||    ||||||| |||||||||||    
T  30557 taaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgtaaaa-cagggtaggg----ctgcgtacaatacaccaaa 30651  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
      |||||||||||||||||||||||||| |||| ||||||| | |||||||| | |||||||||    
T  30652 --tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 30713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 13180 - 13023
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||| | |||||| ||||||||| ||||    |||||||||| |||||||| ||    
T  13180 taaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaaaaacaaggta----aggctgcgtacaatacaccgaa 13085  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
      ||||||||||||||||| ||||||||||||| ||| ||||| |||||||| | |||||||||    
T  13084 --tggtgggaccccttcccagaccctgcgtatgcgggggctttagtgcaccgggttgccctttt 13023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 74 - 228
Target Start/End: Original strand, 58963 - 59114
Alignment:
Q  74 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtg 172  Q
    ||||||||||||||||| | ||||||| |||||||| ||||| | ||||||| |||||| |||||||    || ||||||| ||||||||||||||||||    
T  58963 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta----agactgcgtacaatacaccaaaaatggtg 59058  T
Q  173 ggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    |||||||||||| ||| ||||||||| ||||||||| ||||| || | ||||||||    
T  59059 ggaccccttcccagactctgcgtatgcgggagctttagtgcatcgggttgcccttt 59114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 46809 - 46967
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtaggg-aaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||  || | ||||||| ||||| || |||||   ||||||||||||||     ||||| |||| |||||| ||||||||||    
T  46809 taaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaa----tagggtaaggttgcgtacaatacaccaa 46904  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttt 229  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  46905 a--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 46967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 214
Target Start/End: Complemental strand, 24924 - 24786
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    ||||||||||||||||||||||||| | || |||| ||||||     ||| | |||||||||||||| |||||||    |||||||||| || |||||||    
T  24924 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaaaacagggta----aggctgcgtacaacacaccaa 24834  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgca 214  Q
    |  |||||||||||||||||| |||||||||||| ||||||||| |||||    
T  24833 a--tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgca 24786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 230
Target Start/End: Original strand, 43709 - 43795
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggacccc-ttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||| ||||||||  ||||||||||||||| ||| |||||||||| |||| ||||||| | |||||| ||| ||||||||||    
T  43709 aaggctgcgtacaatacacc--aaatggtgggacccctttctcggaccctgcatatgcgggagctctagtgcactgagttgccctttta 43795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 46771 - 46727
Alignment:
Q  164 aaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 208  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  46771 aaaatggtgggaccccttcccagaccctgcgtatgcgggagcttt 46727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 215
Target Start/End: Original strand, 10788 - 10932
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||||||||||||| || | ||||||| ||||  ||  ||||   |||||||||||||| ||||||||||    ||||||  ||||||||||    
T  10788 taaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtaggg----ctgcgtccaatacaccaa 10883  T
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcac 215  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  10884 a--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcac 10932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 10205 - 10080
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||| |||    || ||||||| |||||||||||    
T  10205 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagagta----agactgcgtacaatacaccaaa 10111  T
Q  166 aatggtgggaccccttcccggaccctgcgtatg 198  Q
     |  |||||||||||||||||||||||| ||||    
T  10110 ta--gtgggaccccttcccggaccctgcatatg 10080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 20533 - 20408
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||| |||    || ||||||| |||||||||||    
T  20533 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagagta----agactgcgtacaatacaccaaa 20439  T
Q  166 aatggtgggaccccttcccggaccctgcgtatg 198  Q
     |  |||||||||||||||||||||||| ||||    
T  20438 ta--gtgggaccccttcccggaccctgcatatg 20408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 66 - 216
Target Start/End: Complemental strand, 1742 - 1599
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    ||||||||||||||||||||||||| | || |||| ||||||||  ||||   ||||||||||||| |||| ||    ||||||| || |||||||||||    
T  1742 taaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaaaa-caggata----aggctgcatacaatacaccaaa 1648  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 216  Q
      || |||||||||||||||||||| ||||||| ||||||||| |||||||    
T  1647 --tgatgggaccccttcccggacccggcgtatgcgggagctttagtgcacc 1599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 143 - 230
Target Start/End: Complemental strand, 48717 - 48632
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgccctttta 230  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | |||||||| | ||||||||||    
T  48717 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttta 48632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 4135 - 4258
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaa-acagggtagggaaggctgcgtaaaatacaccaa 164  Q
    |||||||||||| |||||||||||| | ||||||| |||||||| |||||   ||||||||||||| ||||| |    |||| |||||| ||||||||||    
T  4135 taaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggat----aaggttgcgtacaatacaccaa 4230  T
Q  165 -aaatggtgggaccccttcccggaccct 191  Q
     || ||||||||||||||||||||||||    
T  4231 taattggtgggaccccttcccggaccct 4258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 24216 - 24144
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccg 217  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||| ||||||| | ||||||||    
T  24216 aaggctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccg 24144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 216
Target Start/End: Original strand, 11110 - 11252
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaa 165  Q
    |||||||||| | |||||||||||| | ||||||| |||||||| ||||| | ||||||||||||| ||  |||    ||||||| || |||||||||||    
T  11110 taaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-caaagta----aggctgcttacaatacaccaaa 11203  T
Q  166 aatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcacc 216  Q
      ||||||||| |||||||||||||||| |||| ||||||| | |||||||    
T  11204 --tggtgggacaccttcccggaccctgcatatgcgggagctctagtgcacc 11252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 72997 - 72879
Alignment:
Q  94 cacgggtccaagtcctagaaacg-gtctcttgtgtaaaaa-cagggtagggaaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccct 191  Q
    ||||||| ||||||||||||||  |||||||||||||||| || ||||    ||||||| || |||||||||||  |||| | ||||||||||||| |||    
T  72997 cacgggttcaagtcctagaaacaagtctcttgtgtaaaaaacacggta----aggctgcctacaatacaccaaa--tggtagtaccccttcccggaacct 72904  T
Q  192 gcgtatgagggagctttggtgcacc 216  Q
    ||||||| ||||||||| |||||||    
T  72903 gcgtatgcgggagctttagtgcacc 72879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 3596 - 3679
Alignment:
Q  143 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccgagctgcccttt 228  Q
    ||||||||||| |||||||| ||  || ||||||||||||||| |||||||||||| || |||||| |||||||||| | ||||||    
T  3596 aaggctgcgtataatacaccgaa--tgatgggaccccttcccgaaccctgcgtatgcggcagctttagtgcaccgagtttcccttt 3679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 226563 - 226497
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaa 132  Q
    ||||||||||||||||||||||||| | ||||| | |||||||||||||| | ||||||| ||||||    
T  226563 taaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaa 226497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 197
Target Start/End: Complemental strand, 35167 - 35048
Alignment:
Q  74 ttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctctt--gtgtaaaaacagggtagggaaggctgcgtaaaatacaccaaaaatggt 171  Q
    |||||||||||||| || | ||||||| ||||||||  |||| |||||||  |||| ||||||||||    ||||||||||| ||||||||  |||||||    
T  35167 ttgtcatgtgactgtaaggtcacgggttcaagtcctgaaaacagtctcttgtgtgtgaaaacagggt----aaggctgcgtacaatacacc--aaatggt 35074  T
Q  172 gggaccccttcccggaccctgcgtat 197  Q
    ||||||| |||| ||| | |||||||    
T  35073 gggaccctttcctggatcttgcgtat 35048  T

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Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 43107 - 43176
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaacggtctcttgtgtaaaaacag 135  Q
    ||||||| ||||||||||| ||||| | |||| || || ||||||||||| | |||||||||||||||||    
T  43107 taaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctcttgtgtaaaaacag 43176  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 83853 - 83894
Alignment:
Q  66 taaagttgttgtcatgtgactgaaacgacacgggtccaagtc 107  Q
    ||||||||||||||||||||||||| | ||||||| ||||||    
T  83853 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 83894  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 24639 - 24691
Alignment:
Q  63 tgataaagttgttgtcatgtgactgaaacgacacgggtccaagtcctagaaac 115  Q
    ||||||||||||||||| ||||||| || | ||||||| |||||||| |||||    
T  24639 tgataaagttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaac 24691  T

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Target: scaffold0167 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 23671 - 23715
Alignment:
Q  165 aaatggtgggaccccttcccggaccctgcgtatgagggagctttg 209  Q
    |||||||||||||||||||| |||| || ||||| ||||||||||    
T  23671 aaatggtgggaccccttcccagaccttgagtatgtgggagctttg 23715  T

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