View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6870A_low_98 (Length: 217)
Name: NF6870A_low_98
Description: NF6870A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6870A_low_98 |
 | |
|
| [»] chr1 (4 HSPs) |
| |
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| [»] chr2 (3 HSPs) |
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|
| [»] scaffold1361 (1 HSPs) |
| |
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| [»] scaffold0050 (1 HSPs) |
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| [»] chr6 (1 HSPs) |
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| [»] chr5 (3 HSPs) |
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| [»] chr4 (7 HSPs) |
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| [»] scaffold0008 (1 HSPs) |
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| [»] chr3 (6 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 177; Significance: 1e-95; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 14 - 217
Target Start/End: Complemental strand, 10909522 - 10909318
Alignment:
| Q |
14 |
atatggtaaagattgtggttgtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||| |
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|
| T |
10909522 |
atatggtaaagattgtggttgtgagtggtggttttgttggtggtgaagacttattaaccaagggttttcttcacttcccaaacaaaatgacagggttagt |
10909423 |
T |
|
| Q |
114 |
tttgcgaacaaaatggccacaaagtgaag-tttacaaaggcaactccttgctcacttgaaaactcactttccgttgatttttcgcacaaactcaactccg |
212 |
Q |
| |
|
||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10909422 |
tttgcgaacgaaatggccgcaaagtgaagttttacaaaggcaactccttgctcacttgaaaactcactttccgttgatttttcgcacaaactcaactccg |
10909323 |
T |
|
| Q |
213 |
aggta |
217 |
Q |
| |
|
||||| |
|
|
| T |
10909322 |
aggta |
10909318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 17 - 217
Target Start/End: Original strand, 2409728 - 2409930
Alignment:
| Q |
17 |
tggtaaagattgtggttgtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagtttt |
116 |
Q |
| |
|
|||| |||||| || | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| |
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|
| T |
2409728 |
tggtgaagattttgatggtgagtggtgattttgttggtggtgaagacttgttaaccaagggttttcttcacttcccaaacaaaatggcggtgttagtttt |
2409827 |
T |
|
| Q |
117 |
gcgaacaaaatggccacaaagtgaag-tttacaaaggcaactccttgctcacttgaaaactcactttccgttga-tttttcgcacaaactcaactccgag |
214 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
2409828 |
gcgaacaaaatggccgcaaagtgaagttttacaaaggcaactccttgctcacttgaaaactcactttacgttgattttttcgcacgaactcaactccgag |
2409927 |
T |
|
| Q |
215 |
gta |
217 |
Q |
| |
|
||| |
|
|
| T |
2409928 |
gta |
2409930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 734445 - 734553
Alignment:
| Q |
110 |
tagttttgcgaacaaaatggccacaaagtgaag-tttacaaaggcaactccttgctcacttgaaaactcactttccgttgatttt-tcgcacaaactcaa |
207 |
Q |
| |
|
|||||| ||||||||| | ||| |||||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| |
|
|
| T |
734445 |
tagtttcgcgaacaaa-tagccgcaaagtgaagatttaagaaagcaactccttgctcacttgaaaactcacttttcgttgattttcccgcgcaaactcaa |
734543 |
T |
|
| Q |
208 |
ctccgaggta |
217 |
Q |
| |
|
|||||||||| |
|
|
| T |
734544 |
ctccgaggta |
734553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 2409698 - 2409736
Alignment:
| Q |
24 |
gattgtggttgtgagtggtggttttgttggtggtgaaga |
62 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
2409698 |
gattgtggtggtgggtggtggttttgttggtggtgaaga |
2409736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 166; Significance: 5e-89; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 42277551 - 42277756
Alignment:
| Q |
14 |
atatggtaaagattgtggttgtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagt |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
42277551 |
atatggtaaagattgtggttgtgagtggtggttttgttggtggtgaagacttgttaaccaacggttttcttcacttcccaaacaaaatgacagggttagt |
42277650 |
T |
|
| Q |
114 |
tttgcgaacaaaatggccacaaagtgaag-tttacaaaggcaactccttgctcacttgaaaactcactttccgttga-tttttcgcacaaactcaactcc |
211 |
Q |
| |
|
||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
42277651 |
tttgcaaacaaaatggccgcaaagtgaagttttactaaggcaactccttgctcacttgaaaactcactttccgttgattttttcgcacaaactcaactcc |
42277750 |
T |
|
| Q |
212 |
gaggta |
217 |
Q |
| |
|
|||||| |
|
|
| T |
42277751 |
gaggta |
42277756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 31487194 - 31487095
Alignment:
| Q |
120 |
aacaaaatggccacaaagtgaagttta-caaaggcaactccttgctcacttgaaaactcactttccgttgat-ttttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
31487194 |
aacaaaatggccgcaaagtgaagtttaacaaaggcaactccttgctctcttgaaaactcactttccgttgattttttcgcacaaactcaactccgaggta |
31487095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 31487263 - 31487186
Alignment:
| Q |
24 |
gattgtggttgtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatg |
102 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
31487263 |
gattgtggtgatgagtggtggttttgtgggtggtgaaga-ttgttaaccaagggttttcttcacttcctaaacaaaatg |
31487186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 42680553 - 42680749
Alignment:
| Q |
14 |
atatggtaaagattgtggttgtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagt |
113 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| || |
|
|
| T |
42680553 |
atatggtaaagattgtggttatgagtggtggttttgttggtggtgaagacttgttaatcaagggttttcttcacttcccaaacaaaatgacggggtttgt |
42680652 |
T |
|
| Q |
114 |
tttgcgaacaaaatggccacaaagtgaag-tttacaaaggcaactccttgctcacttgaaaactcactttccgttgatttttcgcacaaactcaact |
209 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42680653 |
tttgcgaacaaaatggttacaaagtgaagttttacaaaggcaactccttgctcacttgaaaactcactttccgttgatttttcgcacaaactcaact |
42680749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 3052598 - 3052451
Alignment:
| Q |
23 |
agattgtggttgtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagttttgcgaac |
122 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||| |
|
|
| T |
3052598 |
agattgtggtggtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcccaaacaaaatgacggtgttagtttagcgaac |
3052499 |
T |
|
| Q |
123 |
aaaatggccacaaagtgaag-tttacaaaggcaactccttgctcactt |
169 |
Q |
| |
|
||||||||| |||||||||| ||||| |||||| |||||||| ||||| |
|
|
| T |
3052498 |
aaaatggccgcaaagtgaagttttacgaaggcagctccttgcacactt |
3052451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 3053423 - 3053565
Alignment:
| Q |
17 |
tggtaaagattgtggttgtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagtttt |
116 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
3053423 |
tggtgaagattgtggtggtgagtggtggttttgttggtggtgaaaacttgttaaccaagggttttcctcacttcccaaacaaaatgacgatgttagttta |
3053522 |
T |
|
| Q |
117 |
gcgaacaaaatggccacaaagtgaag-tttacaaaggcaactc |
158 |
Q |
| |
|
||||||||||||||| |||||||||| ||||| |||||||||| |
|
|
| T |
3053523 |
gcgaacaaaatggccgcaaagtgaagttttacgaaggcaactc |
3053565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 92 - 217
Target Start/End: Original strand, 8733342 - 8733469
Alignment:
| Q |
92 |
caaacaaaatgacggggttagttttgcgaacaaaatggccacaaagtgaagttt-acaaaggcaactccttgctcacttgaaaactcactttccgttga- |
189 |
Q |
| |
|
||||||||||||||| |||||||| |||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8733342 |
caaacaaaatgacggtgttagtttcgcgatcaaaatggccgcaaagtgaagtttcacaaaggcaactccttgctcacttgaaaactcactttccgttgat |
8733441 |
T |
|
| Q |
190 |
tttttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
|||||||| ||||||||||||||||||| |
|
|
| T |
8733442 |
tttttcgctcaaactcaactccgaggta |
8733469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 95 - 217
Target Start/End: Complemental strand, 19787116 - 19786992
Alignment:
| Q |
95 |
acaaaatgacggggttagttttgcgaacaaaatggccacaaagtgaagttt-acaaaggcaactccttgctcacttgaaaactcactttccgttgat-tt |
192 |
Q |
| |
|
|||||||||||| |||||||| |||| |||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| || |
|
|
| T |
19787116 |
acaaaatgacggtgttagtttcgcgatcaaaatggccgcaaagtgaagtttcacaaaggcaactccttactcacttgaaaactcactttccgttgatttt |
19787017 |
T |
|
| Q |
193 |
ttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
19787016 |
ttcgcacaaactcaactccgaggta |
19786992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 16534985 - 16535109
Alignment:
| Q |
95 |
acaaaatgacggggttagttttgcgaacaaaatggccacaaagtgaag-tttacaaaggcaactccttgctcacttgaaaactcactttccgttgatttt |
193 |
Q |
| |
|
|||||||||||| |||||||| |||| |||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
16534985 |
acaaaatgacggtgttagtttcgcgatcaaaatggccgcaaagtgaagatttaagaaagcaactccttgctcacttgaaaactcacttttcgttgatttt |
16535084 |
T |
|
| Q |
194 |
-tcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
16535085 |
cccgcgcaaactcaactccgaggta |
16535109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 95 - 217
Target Start/End: Complemental strand, 16630677 - 16630553
Alignment:
| Q |
95 |
acaaaatgacggggttagttttgcgaacaaaatggccacaaagtgaag-tttacaaaggcaactccttgctcacttgaaaactcactttccgttgatttt |
193 |
Q |
| |
|
|||||||||||| |||||||| |||| |||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
16630677 |
acaaaatgacggtgttagtttcgcgatcaaaatggccgcaaagtgaagatttaagaaagcaactccttgctcacttgaaaactcacttttcgttgatttt |
16630578 |
T |
|
| Q |
194 |
-tcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
16630577 |
cccgcgcaaactcaactccgaggta |
16630553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 3933021 - 3932926
Alignment:
| Q |
124 |
aaatggccacaaagtgaag-tttacaaaggcaactccttgctcacttgaaaactcactttccgttgatttt-tcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
|||| ||| |||||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| |
|
|
| T |
3933021 |
aaatagccgcaaagtgaagatttaagaaagcaactccttgctcacttgaaaactcacttttcgttgattttcccgcgcaaactcaactccgaggta |
3932926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 21768933 - 21769043
Alignment:
| Q |
108 |
gttagttttgcgaacaaaatggccacaaagtgaagtttaca-aaggcaactccttgctcacttgaaaactcactttccgttgattt-ttcgcacaaactc |
205 |
Q |
| |
|
|||||||| ||||||||| |||| |||||||||||||| | || |||||||||||||| ||||||||||||||||||||| |||| ||| | ||||||| |
|
|
| T |
21768933 |
gttagtttcgcgaacaaa-tggctacaaagtgaagttttgagaaagcaactccttgctcgcttgaaaactcactttccgtttatttcttctctcaaactc |
21769031 |
T |
|
| Q |
206 |
aactccgaggta |
217 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
21769032 |
aactccaaggta |
21769043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 3933130 - 3933033
Alignment:
| Q |
124 |
aaatggccacaaagtgaagtttaca-aaggcaactccttgctc--acttgaaaactcactttccgttgattt-ttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
|||||||| ||||||||||||| | || |||||||||||||| ||||||||||||||| ||||||||||| ||||| ||||| |||||| |||||| |
|
|
| T |
3933130 |
aaatggccgcaaagtgaagttttgagaaagcaactccttgctctcacttgaaaactcactctccgttgatttcttcgctcaaacacaactctgaggta |
3933033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 16534903 - 16534974
Alignment:
| Q |
124 |
aaatggccacaaagtgaagtttaca-aaggcaactccttgctc--acttgaaaactcactttccgttgattt |
192 |
Q |
| |
|
|||||||| ||||||||||||| | || |||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
16534903 |
aaatggccgcaaagtgaagttttgagaaagcaactccttactctcacttgaaaactcactttccgttgattt |
16534974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 16630759 - 16630688
Alignment:
| Q |
124 |
aaatggccacaaagtgaagtttaca-aaggcaactccttgctc--acttgaaaactcactttccgttgattt |
192 |
Q |
| |
|
|||||||| ||||||||||||| | || |||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
16630759 |
aaatggccgcaaagtgaagttttgagaaagcaactccttactctcacttgaaaactcactttccgttgattt |
16630688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 19787198 - 19787127
Alignment:
| Q |
124 |
aaatggccacaaagtgaagtttaca-aaggcaactccttgctc--acttgaaaactcactttccgttgattt |
192 |
Q |
| |
|
|||||||| ||||||||||||| | || |||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
19787198 |
aaatggccgcaaagtgaagttttgagaaagcaactccttactctcacttgaaaactcactttccgttgattt |
19787127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 8733263 - 8733334
Alignment:
| Q |
124 |
aaatggccacaaagtgaagtttaca-aaggcaactccttgctc--acttgaaaactcactttccgttgattt |
192 |
Q |
| |
|
|||||||| ||||||||||||| | || |||||||||| ||| ||||||||||||||||||| ||||||| |
|
|
| T |
8733263 |
aaatggccgcaaagtgaagttttgagaaagcaactccttactctcacttgaaaactcactttccattgattt |
8733334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1361 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold1361
Description:
Target: scaffold1361; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 50 - 217
Target Start/End: Complemental strand, 335 - 166
Alignment:
| Q |
50 |
ttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagttttgcgaacaaaatggccacaaagtgaag-tttaca |
148 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||| |
|
|
| T |
335 |
ttggtggtgaagacttgttaaccaagggttttcttcacttcccaaacaaaatgacggggttagttttacgaacaaaatggccgcaaagtgaagttttaca |
236 |
T |
|
| Q |
149 |
aaggcaactccttgctcacttgaaaactcactttccgttga-tttttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
235 |
aaggcaactccttgctcacttgaaaactcacttttcgttgattttttcgcacaaactcaactccgaggta |
166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0050 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0050
Description:
Target: scaffold0050; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 217
Target Start/End: Complemental strand, 29742 - 29540
Alignment:
| Q |
17 |
tggtaaagattgtggttgtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagtttt |
116 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
29742 |
tggtgaagattgtggtggtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcccaaacaaaatgacggtgttagtttc |
29643 |
T |
|
| Q |
117 |
gcgaacaaaatggccacaaagtgaag-tttacaaaggcaactccttgctcacttgaaaactcactttccgttga-tttttcgcacaaactcaactccgag |
214 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| || |||||||||| ||||| |
|
|
| T |
29642 |
acgaacaaaatggccgtaaagtgaagttttacaaaggcaagtccttgctcacttgaaaacccactttccgttgatttttttgctcaaactcaacgccgag |
29543 |
T |
|
| Q |
215 |
gta |
217 |
Q |
| |
|
||| |
|
|
| T |
29542 |
gta |
29540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 20642584 - 20642387
Alignment:
| Q |
22 |
aagattgtggttgtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagttttgcgaa |
121 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||| |
|
|
| T |
20642584 |
aagattgtggtggtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcccaaacaaaatgacagtgttagtttcgcgaa |
20642485 |
T |
|
| Q |
122 |
caaaatggccacaaagtgaag-tttacaaaggcaactccttgctcacttgaaaactcactttccgttga-tttttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
||||||||| |||||||||| ||| || | |||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||| |
|
|
| T |
20642484 |
caaaatggctgcaaagtgaagttttccacatgcaactccttgctcacttgaaaactcactttccgttgattttttcgctaaaactcgactccgaggta |
20642387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 129; Significance: 6e-67; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 35 - 217
Target Start/End: Complemental strand, 37208279 - 37208096
Alignment:
| Q |
35 |
tgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagttttgcgaacaaaatggccaca |
134 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||| || |
|
|
| T |
37208279 |
tgagtggtggttttgtgggtggtgaaga-ttgttaaccaagggttttcttcacttcccaaacaaaatggtggtgttagtttcgcgaacaaaatggccgca |
37208181 |
T |
|
| Q |
135 |
aagtgaag-tttacaaaggcaactccttgctcacttgaaaactcactttccgttga-tttttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
37208180 |
aagtgaagttttacaaaggcaactccttgcgcacttgaaaactcactttccgttgattttttcgcacaaactcaactccgaggta |
37208096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 11852025 - 11852149
Alignment:
| Q |
95 |
acaaaatgacggggttagttttgcgaacaaaatggccacaaagtgaagttt-acaaaggcaactccttgctcacttgaaaactcactttccgttga-ttt |
192 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| | ||| |
|
|
| T |
11852025 |
acaaaatgacggtgttagttttgcgatcaaaatggccgcaaagtgaagtttcacaaaggcaactccttgctcacttgtaaactcactttccgtttatttt |
11852124 |
T |
|
| Q |
193 |
ttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
||||| ||||||||||||||||||| |
|
|
| T |
11852125 |
ttcgctcaaactcaactccgaggta |
11852149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 192
Target Start/End: Original strand, 11851985 - 11852014
Alignment:
| Q |
163 |
ctcacttgaaaactcactttccgttgattt |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
11851985 |
ctcacttgaaaactcactttccgttgattt |
11852014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 129; Significance: 6e-67; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 39 - 217
Target Start/End: Complemental strand, 45162570 - 45162391
Alignment:
| Q |
39 |
tggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagttttgcgaacaaaatggccacaaagt |
138 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||| |
|
|
| T |
45162570 |
tggtggttttgttggtggtgaaga-ttgttaaccaagggttttcttcacttcccaaacaaaatagcggtgttagttttgcgaacaaaatggccgcaaagt |
45162472 |
T |
|
| Q |
139 |
gaag-tttacaaaggcaactccttgctcacttgaaaactcactttccgttga-tttttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
45162471 |
gaagttttacaaaggcaactccttgctcacttgaaaactcactttacgttgattttttcgcacgaactcaactccgaggta |
45162391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 42470432 - 42470627
Alignment:
| Q |
17 |
tggtaaagattgtggttgtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagtttt |
116 |
Q |
| |
|
|||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||| |
|
|
| T |
42470432 |
tggtgaagattgtggtggtgagcggtaattttgttggtggtgaagacttgttaaccaagggttttcttcactttccaaacaaaatgacggtgctagtttc |
42470531 |
T |
|
| Q |
117 |
gcgaacaaaatggccacaaagtgaagttt-acaaaggcaactccttgctcacttgaaaactcactttccgttga--tttttcgcacaaactcaact |
209 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
42470532 |
acgaacaaaatggccgcaaagtgaagtttcacaaaggcaactccttgctcttttgaaaactcactttccgttgatttttttcgctcaaactcaact |
42470627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 13774460 - 13774362
Alignment:
| Q |
122 |
caaaatggccacaaagtgaagttt-acaaaggcaactccttgctcacttgaaaactcactttccgttgat--ttttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||| |
|
|
| T |
13774460 |
caaaatggccgcaaagtgaagtttcacaaaggcaactccttgctcacttgaaaactcactttccgttgatttttttcgctcaacctcaacttcgaggta |
13774362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 42470634 - 42470742
Alignment:
| Q |
110 |
tagttttgcgaacaaaatggccacaaagtgaagtttaca-aaggcaactccttgctcacttgaaaactcactttccgttgattt-ttcgcacaaactcaa |
207 |
Q |
| |
|
|||||| ||||||||| ||||| ||||||||||||| | || ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
42470634 |
tagtttcgcgaacaaa-tggccgcaaagtgaagttttaagaaagcaacaccttgctcacttgaaaactcactttccgttgatttcttcgctcaaactcaa |
42470732 |
T |
|
| Q |
208 |
ctccgaggta |
217 |
Q |
| |
|
||||| |||| |
|
|
| T |
42470733 |
ctccgtggta |
42470742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 24907984 - 24908050
Alignment:
| Q |
152 |
gcaactccttgctcacttgaaaactcactttccgttgattt-ttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||| |||||| |
|
|
| T |
24907984 |
gcaactccttgctcacttaaaaactcactttctgttgatttcttcgctcaaactcaactctgaggta |
24908050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 13774517 - 13774467
Alignment:
| Q |
95 |
acaaaatgacggggttagttttgcgaacaaaatggccacaaagtgaagttt |
145 |
Q |
| |
|
|||||||||||| |||||||| |||| |||||||||| ||||||||||||| |
|
|
| T |
13774517 |
acaaaatgacggtgttagtttcgcgatcaaaatggccgcaaagtgaagttt |
13774467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 13774599 - 13774528
Alignment:
| Q |
124 |
aaatggccacaaagtgaagtttaca-aaggcaactccttgctc--acttgaaaactcactttccgttgattt |
192 |
Q |
| |
|
|||||||| ||||||||||||| | || |||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
13774599 |
aaatggccgcaaagtgaagttttgagaaagcaactccttactctcacttgaaaactcactttccgttgattt |
13774528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 41 - 217
Target Start/End: Complemental strand, 88735 - 88558
Alignment:
| Q |
41 |
gtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagttttgcgaacaaaatggccacaaagtga |
140 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
88735 |
gtggttttgttggtggtgaaaa-ttgttaaccaagggttttcttcacttcccaaacaaaatagcggtgttagttttgcgaacaaaatggccgcaaagtga |
88637 |
T |
|
| Q |
141 |
ag-tttacaaaggcaactccttgctcacttgaaaactcactttccgttga-tttttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
|| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
88636 |
agttttacaaaggaaactccttgctcacttgaaaactcactttccgttgattttttcgcacaaactcaactccgaggta |
88558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 217
Target Start/End: Original strand, 18965923 - 18966125
Alignment:
| Q |
17 |
tggtaaagattgtggttgtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagtttt |
116 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||| |||||||| |
|
|
| T |
18965923 |
tggtgaagattgtggtggtgagtggtggttttgttggtggtgaagacttgttaaccaagagttttcttcacttcccaatcaaaatgacggtgttagtttc |
18966022 |
T |
|
| Q |
117 |
gcgaacaaaatggccacaaagtgaag-tttacaaaggcaactccttgctcacttgaaaactcactttccgttga-tttttcgcacaaactcaactccgag |
214 |
Q |
| |
|
|||||||||||||| |||||||||| ||| || |||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
18966023 |
ccgaacaaaatggccgcaaagtgaagttttccataggcaactccatgctcacttgaaaactcactttccgttgattttttcgctataactcaactccgag |
18966122 |
T |
|
| Q |
215 |
gta |
217 |
Q |
| |
|
||| |
|
|
| T |
18966123 |
gta |
18966125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 4531144 - 4531046
Alignment:
| Q |
122 |
caaaatggccacaaagtgaagttt-acaaaggcaactccttgctcacttgaaaactcactttccgttgat--ttttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||| |
|
|
| T |
4531144 |
caaaatggccgcaaagtgaagtttcacaaaggcaactccttgctcacttgaaaactcactttccgttgatttttttcgctcaacctcaacttcgaggta |
4531046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 4531201 - 4531151
Alignment:
| Q |
95 |
acaaaatgacggggttagttttgcgaacaaaatggccacaaagtgaagttt |
145 |
Q |
| |
|
|||||||||||| |||||||| |||| |||||||||| ||||||||||||| |
|
|
| T |
4531201 |
acaaaatgacggtgttagtttcgcgatcaaaatggccgcaaagtgaagttt |
4531151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 4531283 - 4531212
Alignment:
| Q |
124 |
aaatggccacaaagtgaagtttaca-aaggcaactccttgctc--acttgaaaactcactttccgttgattt |
192 |
Q |
| |
|
|||||||| ||||||||||||| | || |||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
4531283 |
aaatggccgcaaagtgaagttttgagaaagcaactccttactctcacttgaaaactcactttccgttgattt |
4531212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 191
Target Start/End: Complemental strand, 26306890 - 26306778
Alignment:
| Q |
80 |
ttcttcacttcacaaacaaaatgacggggttagttttgcgaacaaaatggccacaaagtgaagttt-acaaaggcaactccttgctcacttgaaaactca |
178 |
Q |
| |
|
||||||| ||| |||||||||||| || |||||| | ||||||||||| ||| |||||||||||| || || || | | || |||||||||||||| | |
|
|
| T |
26306890 |
ttcttcatttcccaaacaaaatgaaggtgttagtgtcgcgaacaaaatagccgtaaagtgaagtttcacgaacgcgatttttttctcacttgaaaactta |
26306791 |
T |
|
| Q |
179 |
ctttccgttgatt |
191 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
26306790 |
ctttccattgatt |
26306778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 217
Target Start/End: Complemental strand, 1701483 - 1701386
Alignment:
| Q |
123 |
aaaatggccacaaagtgaagtttac-aaaggcaactccttgctcacttgaaaactcac-tttccgttgattt-ttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
|||||||| ||||||||||||| ||| ||||||||||| ||||||||||||| || ||| ||||||||| ||||| |||||| ||||| |||||| |
|
|
| T |
1701483 |
aaaatggctgcaaagtgaagttttggaaaagcaactccttgttcacttgaaaacttactttttcgttgatttcttcgctcaaactgaactctgaggta |
1701386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 117; Significance: 9e-60; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 4877512 - 4877317
Alignment:
| Q |
17 |
tggtaaagattgtggttgtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatgacggggttagtttt |
116 |
Q |
| |
|
|||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||| |
|
|
| T |
4877512 |
tggtgaagattgtggtggtgagcggtaattttgttggtggtgaagacttgttaaccaagggttttcttcactttccaaacaaaatgacggtgctagtttc |
4877413 |
T |
|
| Q |
117 |
gcgaacaaaatggccacaaagtgaagttt-acaaaggcaactccttgctcacttgaaaactcactttccgttga--tttttcgcacaaactcaact |
209 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
4877412 |
acgaacaaaatggccgcaaagtgaagtttcacaaaggcaactccttgctcttttgaaaactcactttccgttgatttttttcgctcaaactcaact |
4877317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 36379340 - 36379439
Alignment:
| Q |
120 |
aacaaaatggccacaaagtgaagttta-caaaggcaactccttgctcacttgaaaactcactttccgttga-tttttcgcacaaactcaactccgaggta |
217 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
36379340 |
aacaaaatggccgcaaagtgaagtttaacaaaggcaactccttgctctcttgaaaactcactttccgttgattttttcgcacaaactcaactccgaggta |
36379439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 4877310 - 4877202
Alignment:
| Q |
110 |
tagttttgcgaacaaaatggccacaaagtgaagtttaca-aaggcaactccttgctcacttgaaaactcactttccgttgattt-ttcgcacaaactcaa |
207 |
Q |
| |
|
|||||| ||||||||| ||||| ||||||||||||| | || ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
4877310 |
tagtttcgcgaacaaa-tggccgcaaagtgaagttttaagaaagcaacaccttgctcacttgaaaactcactttccgttgatttcttcgctcaaactcaa |
4877212 |
T |
|
| Q |
208 |
ctccgaggta |
217 |
Q |
| |
|
||||| |||| |
|
|
| T |
4877211 |
ctccgtggta |
4877202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 36379271 - 36379348
Alignment:
| Q |
24 |
gattgtggttgtgagtggtggttttgttggtggtgaagacttgttaaccaagggttttcttcacttcacaaacaaaatg |
102 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
36379271 |
gattgtggtgatgagtggtggttttgtgggtggtgaaga-ttgttaaccaagggttttcttcacttcctaaacaaaatg |
36379348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 7938990 - 7939104
Alignment:
| Q |
79 |
tttcttcacttcacaaacaaaatgacggggttagttttgcgaacaaaatggccacaaagtgaagttt-acaaaggcaactccttgctcacttgaaaactc |
177 |
Q |
| |
|
|||||| ||||| |||||| ||| ||| ||| ||||| ||||||||||| | |||||||| |||| |||| | ||||||||| |||||| |||||||| |
|
|
| T |
7938990 |
tttcttaacttcccaaacataataacgatgtttgttttaagaacaaaatgggcgcaaagtgatgtttcacaaggacaactccttactcactggaaaactc |
7939089 |
T |
|
| Q |
178 |
actttccgttgattt |
192 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
7939090 |
actttccgtttattt |
7939104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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