View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6871A_low_122 (Length: 251)
Name: NF6871A_low_122
Description: NF6871A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6871A_low_122 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 44951938 - 44952187
Alignment:
| Q |
2 |
tgaacatttaaagtgctaagttaacgaagggtgaatggctgagttacatggtttataataaaaaatcaagacaaatactaagaagtatacataaaaataa |
101 |
Q |
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| T |
44951938 |
tgaacatttaaagtgctaagttaacgaagggtgaatggctgagttacatggtgtataataaaaaatcaagacaaatactaagaagtatacataaaaataa |
44952037 |
T |
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| Q |
102 |
aggatttatggtagtcgcatgttataggacccatcgtgtatagagaagtaagattcatttaagatatacatattgcacatttatcaaatacacatttact |
201 |
Q |
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| T |
44952038 |
atgatttatggtagtcgtatgttataggacccatcgtgtatagagaagtaagattcacttaagatatacatattgcacatttatcaaatacacatttact |
44952137 |
T |
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| Q |
202 |
taggaatacgcatgttcaattgatacttatatttcacatttaggtaacat |
251 |
Q |
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| T |
44952138 |
tagaaacacgcatgttcacttgatacttctatttcacattttggtaacat |
44952187 |
T |
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