View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6871A_low_145 (Length: 247)
Name: NF6871A_low_145
Description: NF6871A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6871A_low_145 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 37373309 - 37373081
Alignment:
| Q |
19 |
acatcaatgttgtagatctcgaagtattgatattttggtcacatttgtcacttttgtggctattgtgttattgtatgatattaattttgatgttgtgagc |
118 |
Q |
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| T |
37373309 |
acatcaatgttgtagatctcgaagtattgatattttggtcacatttgtcacttttgtggctattgtgttattgtatgatattaattttgatgttgtgagc |
37373210 |
T |
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| Q |
119 |
ttatctatggaccattcttttcatgtcaacaaattcttcataataaataacattttcaaagaaaatagtggaaataaaattcccttgaaggtggaaataa |
218 |
Q |
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| T |
37373209 |
ttatctatggaccattcttttcatgtcaacaaattcttcataataaataacattttcaaagaaaatagtggaaataaaattcccttgaaggtggaaataa |
37373110 |
T |
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| Q |
219 |
atctacgtgtaaactgttgataaacattt |
247 |
Q |
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| T |
37373109 |
atctacgtgtaaactgttgataaacattt |
37373081 |
T |
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