View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6871A_low_177 (Length: 237)

Name: NF6871A_low_177
Description: NF6871A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6871A_low_177
NF6871A_low_177
[»] chr3 (23 HSPs)
chr3 (14-234)||(33399482-33399702)
chr3 (14-234)||(14399502-14399722)
chr3 (17-223)||(46992143-46992349)
chr3 (14-223)||(7841909-7842118)
chr3 (14-223)||(36816410-36816619)
chr3 (14-223)||(21955132-21955341)
chr3 (14-223)||(29930326-29930535)
chr3 (14-223)||(29979480-29979689)
chr3 (14-223)||(48249761-48249970)
chr3 (14-221)||(13746615-13746822)
chr3 (17-223)||(77917-78123)
chr3 (14-223)||(7838554-7838763)
chr3 (14-221)||(9428727-9428934)
chr3 (23-221)||(30946545-30946743)
chr3 (14-223)||(6504849-6505058)
chr3 (14-221)||(6741847-6742054)
chr3 (23-221)||(3949703-3949901)
chr3 (23-221)||(8159886-8160084)
chr3 (23-221)||(16445580-16445778)
chr3 (12-116)||(4510341-4510445)
chr3 (59-171)||(25059880-25059992)
chr3 (78-221)||(50954233-50954376)
chr3 (12-116)||(1275281-1275385)
[»] chr1 (25 HSPs)
chr1 (12-234)||(26466162-26466384)
chr1 (1-234)||(32106524-32106754)
chr1 (12-234)||(16246646-16246865)
chr1 (25-207)||(25231276-25231458)
chr1 (14-223)||(21943258-21943467)
chr1 (14-223)||(50116657-50116866)
chr1 (14-234)||(7980106-7980326)
chr1 (14-223)||(37015872-37016081)
chr1 (14-223)||(51663216-51663425)
chr1 (14-234)||(38691833-38692053)
chr1 (14-234)||(46974111-46974331)
chr1 (14-221)||(29355582-29355789)
chr1 (14-221)||(41454797-41455004)
chr1 (14-132)||(5078984-5079102)
chr1 (14-170)||(13174792-13174948)
chr1 (14-221)||(44619997-44620204)
chr1 (23-221)||(20350416-20350614)
chr1 (23-221)||(3947364-3947562)
chr1 (23-221)||(3984073-3984271)
chr1 (23-221)||(13630376-13630574)
chr1 (23-221)||(38775018-38775216)
chr1 (23-221)||(44466542-44466740)
chr1 (36-116)||(39914002-39914082)
chr1 (12-171)||(25593678-25593837)
chr1 (25-132)||(12649484-12649589)
[»] chr5 (21 HSPs)
chr5 (12-225)||(20285965-20286178)
chr5 (23-207)||(23028463-23028654)
chr5 (64-216)||(13157978-13158130)
chr5 (14-223)||(18537230-18537439)
chr5 (40-234)||(20286455-20286650)
chr5 (14-132)||(7020774-7020892)
chr5 (14-223)||(25895995-25896204)
chr5 (14-132)||(27866739-27866857)
chr5 (14-132)||(34078829-34078947)
chr5 (14-223)||(7799900-7800109)
chr5 (14-170)||(4202833-4202989)
chr5 (23-195)||(13567005-13567177)
chr5 (36-223)||(1035466-1035653)
chr5 (14-221)||(11032346-11032553)
chr5 (14-221)||(37819771-37819978)
chr5 (14-221)||(38859084-38859291)
chr5 (14-108)||(1036424-1036518)
chr5 (14-116)||(28885302-28885404)
chr5 (23-107)||(25048472-25048556)
chr5 (12-46)||(20287403-20287437)
chr5 (24-76)||(9376677-9376729)
[»] chr4 (15 HSPs)
chr4 (12-204)||(6182653-6182845)
chr4 (14-223)||(4976713-4976922)
chr4 (14-223)||(18580222-18580431)
chr4 (14-223)||(4978848-4979057)
chr4 (14-170)||(11502517-11502673)
chr4 (14-221)||(9890982-9891189)
chr4 (14-124)||(19072551-19072661)
chr4 (14-223)||(21471752-21471961)
chr4 (14-223)||(51643392-51643603)
chr4 (14-132)||(3404839-3404957)
chr4 (14-132)||(41024248-41024366)
chr4 (29-133)||(4769178-4769282)
chr4 (23-221)||(49565367-49565565)
chr4 (14-104)||(38463731-38463821)
chr4 (148-223)||(17140547-17140622)
[»] chr2 (22 HSPs)
chr2 (12-224)||(17997064-17997276)
chr2 (14-223)||(41007874-41008083)
chr2 (14-200)||(436292-436478)
chr2 (14-223)||(12907386-12907595)
chr2 (22-223)||(11692716-11692917)
chr2 (14-223)||(43949176-43949385)
chr2 (14-221)||(7263992-7264199)
chr2 (14-132)||(3802460-3802578)
chr2 (14-132)||(27275254-27275372)
chr2 (14-223)||(24604983-24605192)
chr2 (14-223)||(24750616-24750825)
chr2 (14-223)||(28354796-28355005)
chr2 (14-132)||(34920676-34920794)
chr2 (17-132)||(45476407-45476522)
chr2 (23-221)||(212344-212542)
chr2 (23-221)||(10623357-10623555)
chr2 (23-132)||(5348216-5348325)
chr2 (23-132)||(41561061-41561170)
chr2 (14-221)||(39794930-39795137)
chr2 (23-221)||(38946723-38946921)
chr2 (150-223)||(34920802-34920875)
chr2 (14-82)||(1098720-1098788)
[»] chr7 (15 HSPs)
chr7 (14-223)||(8400544-8400753)
chr7 (14-234)||(43827500-43827720)
chr7 (14-223)||(47061841-47062050)
chr7 (14-221)||(18106348-18106555)
chr7 (37-234)||(21799959-21800156)
chr7 (23-221)||(617652-617850)
chr7 (14-132)||(15060662-15060780)
chr7 (23-221)||(30787499-30787697)
chr7 (23-221)||(43623038-43623236)
chr7 (23-221)||(45764339-45764537)
chr7 (36-171)||(20908433-20908568)
chr7 (14-221)||(42500367-42500574)
chr7 (24-122)||(3761964-3762062)
chr7 (12-116)||(8194172-8194276)
chr7 (23-107)||(16794516-16794600)
[»] chr8 (15 HSPs)
chr8 (14-223)||(7168858-7169067)
chr8 (14-223)||(35965639-35965848)
chr8 (14-223)||(39751922-39752131)
chr8 (17-223)||(45455334-45455540)
chr8 (14-223)||(43370725-43370934)
chr8 (14-223)||(43689065-43689274)
chr8 (24-171)||(14401676-14401825)
chr8 (36-170)||(22580914-22581048)
chr8 (14-132)||(1115821-1115939)
chr8 (23-221)||(7341039-7341237)
chr8 (23-221)||(8422759-8422957)
chr8 (23-221)||(30304513-30304711)
chr8 (23-221)||(32377811-32378009)
chr8 (23-221)||(32431768-32431966)
chr8 (78-200)||(2145948-2146070)
[»] scaffold0219 (1 HSPs)
scaffold0219 (14-223)||(17027-17236)
[»] chr6 (12 HSPs)
chr6 (14-223)||(18606954-18607163)
chr6 (14-219)||(24220128-24220335)
chr6 (14-170)||(31147333-31147489)
chr6 (14-221)||(28250856-28251063)
chr6 (14-200)||(29287842-29288028)
chr6 (14-132)||(21358241-21358359)
chr6 (14-132)||(23962223-23962341)
chr6 (23-221)||(1611654-1611852)
chr6 (61-223)||(7362137-7362299)
chr6 (56-171)||(34111598-34111713)
chr6 (148-223)||(35243561-35243636)
chr6 (148-221)||(13387722-13387795)
[»] scaffold0341 (1 HSPs)
scaffold0341 (14-132)||(16251-16369)
[»] scaffold0116 (1 HSPs)
scaffold0116 (14-223)||(12220-12429)
[»] scaffold0494 (1 HSPs)
scaffold0494 (14-221)||(1841-2048)
[»] scaffold0101 (1 HSPs)
scaffold0101 (23-221)||(33769-33967)
[»] scaffold0340 (1 HSPs)
scaffold0340 (61-223)||(111-273)


Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 33399702 - 33399482
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33399702 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacgtacaagcttcttgccatcctcctttaatctacccgc 33399603  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  33399602 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgcttgcctactaagatatccacga 33399503  T
Q  214 accatgaacatacacctacat 234  Q
    |||||||||||||||||||||    
T  33399502 accatgaacatacacctacat 33399482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 14399722 - 14399502
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| |||||| |||||||||||| ||    
T  14399722 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcatccttctttaatctaccggc 14399623  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||  | ||||||||||||||||| ||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  14399622 aagaatgtgtccttctaaagccggctccatggcatggttgtgaactccatttagaatgttcaatccccattcctttgtttgcttactttgatatccacta 14399523  T
Q  214 accatgaacatacacctacat 234  Q
    | |||||||| ||||| ||||    
T  14399522 atcatgaacaaacacccacat 14399502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 223
Target Start/End: Original strand, 46992143 - 46992349
Alignment:
Q  17 ttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaag 116  Q
    ||||| ||||||||| || ||||| |||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| |||||    
T  46992143 ttttgttcttcaaatgtatcaaaaaatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggcaag 46992242  T
Q  117 catgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaacc 216  Q
     ||||||| |||||||    | | |||| | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || |    
T  46992243 aatgtgtccttctaaagccggctccatcgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatc 46992342  T
Q  217 atgaaca 223  Q
    |||||||    
T  46992343 atgaaca 46992349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 7841909 - 7842118
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||  ||    
T  7841909 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctacaggc 7842008  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||| | ||||||||||||||||||||||| || ||||   | || ||||||||| ||||  ||||| ||| |    
T  7842009 aagaatgtgtccttctaaagccggcttcatcgcatggttgtgaactccattaagaatgttcaatcctcattcctttgtttgcttactttgatatccacta 7842108  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  7842109 atcatgaaca 7842118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 36816410 - 36816619
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  36816410 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 36816509  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  36816510 aagaatgtgtccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 36816609  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  36816610 atcatgaaca 36816619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 21955132 - 21955341
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  21955132 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 21955231  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||  ||||||| ||||| |    | | |||| | ||||||||||||||||||||||| || |||| | | || ||||||| | ||||  ||||| ||| |    
T  21955232 aataatgtgtccttctagagccggctccatcgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttacttactttgatatccacta 21955331  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  21955332 atcatgaaca 21955341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 29930535 - 29930326
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||| | ||||||||| |   |||||||||||||||| ||||| ||||||| | |||||||||||||||||  |    
T  29930535 gtcttttgttcttcaaatgtatcaaaatatgtcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccgcc 29930436  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    |   |||| | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  29930435 aagaatgtgtccttctaaagccggcatcatcgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 29930336  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  29930335 atcatgaaca 29930326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 29979689 - 29979480
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||| | ||||||||| |   |||||||||||||||| ||||| ||||||| | |||||||||||||||||  |    
T  29979689 gtcttttgttcttcaaatgtatcaaaatatgtcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccgcc 29979590  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    |   |||| | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  29979589 aagaatgtgtccttctaaagccggcatcatcgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 29979490  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  29979489 atcatgaaca 29979480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 48249761 - 48249970
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| | ||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||  ||||||| | ||||||||||||||||| ||    
T  48249761 gtcttttgtttttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacagtcttcttgtcgtcctcctttaatctaccggc 48249860  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| || ||||    | | |||| | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  48249861 aagaatgtgtccttataaagccggctccatcgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 48249960  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  48249961 atcatgaaca 48249970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 13746615 - 13746822
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  13746615 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 13746714  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  13746715 aagaatgtgtccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 13746814  T
Q  214 accatgaa 221  Q
    | ||||||    
T  13746815 atcatgaa 13746822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 223
Target Start/End: Original strand, 77917 - 78123
Alignment:
Q  17 ttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaag 116  Q
    ||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | || |||||||||||||| ||||     
T  77917 ttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcttcctttaatctaccggcaat 78016  T
Q  117 catgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaacc 216  Q
     ||||||| |||||||    | | ||||   ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || |    
T  78017 aatgtgtccttctaaagccggctccatcaaatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatc 78116  T
Q  217 atgaaca 223  Q
    |||||||    
T  78117 atgaaca 78123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 7838763 - 7838554
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| |||||||||     |||||||||||||||| ||||| ||||||| | |||||||||| |||||| |     
T  7838763 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatattgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttagtctaccgga 7838664  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||| | ||||||||||||||| ||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  7838663 aagaatgtgtccttctaaagccggctccatcgcatggttgtgaactccactaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 7838564  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  7838563 atcatgaaca 7838554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 9428727 - 9428934
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   ||||| |||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  9428727 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctctttgtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 9428826  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  9428827 aagaatgtgtccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 9428926  T
Q  214 accatgaa 221  Q
    | ||||||    
T  9428927 atcatgaa 9428934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 30946545 - 30946743
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| ||||||||||||||||||| ||||| |||||    
T  30946545 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcatcctcctttaatctaccggcaagaatgtg 30946644  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  30946645 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 30946743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 6504849 - 6505058
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| |||||| || |    ||||||||||||||  ||||| ||||||  | |||||||||| |||||| ||    
T  6504849 gtcttttgttcttcaaatgtatcaaaatatttcttggaaacatcttgttcttggtcaagtcatgtacaatcttcttttcgtcctcctttagtctaccggc 6504948  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||| | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  6504949 aagaatgtgtcattctaaagccggctccatcgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 6505048  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  6505049 atcatgaaca 6505058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 6742054 - 6741847
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||    
T  6742054 gtctttggttcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggc 6741955  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  6741954 aagaatgtgtccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 6741855  T
Q  214 accatgaa 221  Q
    | ||||||    
T  6741854 atcatgaa 6741847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 3949901 - 3949703
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  3949901 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 3949802  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  3949801 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 3949703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 8159886 - 8160084
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  8159886 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 8159985  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  8159986 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 8160084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 16445778 - 16445580
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||||| || |||||||||| ||||||||| |   ||||| |||||||||| ||||| ||||||| | ||||||||||||||||| | ||| |||||    
T  16445778 tcttcaaatgtatcaaaatatttcttggaagcatcttgctctttgtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggaaagaatgtg 16445679  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  16445678 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 16445580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 4510445 - 4510341
Alignment:
Q  12 ttgtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctaccc 111  Q
    |||||||||  |||||||||||  |||||||||||||||   |||| |||| ||||||||||||  || ||  |||||| | |||||| ||||||| |||    
T  4510445 ttgtcttttcttcttcaaatttgtcaaaatattttttggtttcaccgaactattggtcaagtcatgtataattttcttgtcgtcctccattaatcttccc 4510346  T
Q  112 gcaag 116  Q
    |||||    
T  4510345 gcaag 4510341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 25059880 - 25059992
Alignment:
Q  59 aactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtctttctaaacttcgttacatctcttggttgtgaac 158  Q
    ||||||||||||||||||||| || || |||| | |||| | |||||||  ||||||| ||||| | | |||||  | || ||||||  |||||||||||    
T  25059880 aactcttggtcaagtcacatataatctccttgtcgtccttcattaatctttccgcaagaatgtgccctgctaaatatggtaacatcttatggttgtgaac 25059979  T
Q  159 tccattaagaata 171  Q
     ||||||||||||    
T  25059980 accattaagaata 25059992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 50954376 - 50954233
Alignment:
Q  78 tacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaat 177  Q
    ||||| ||||||| | ||||||||||||||||| ||||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||    
T  50954376 tacaatcttcttgtcgtcctcctttaatctaccggcaagaatgtgtccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaat 50954277  T
Q  178 ctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    | | | || ||||||||| ||||  ||||| ||| || ||||||    
T  50954276 ccccattcctttgtttgcttactttgatatccactaatcatgaa 50954233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 1275281 - 1275385
Alignment:
Q  12 ttgtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctaccc 111  Q
    |||||||||  |||| ||||||  |||||||||||||||   || | |||| ||||||||||||  ||||| ||||||| | |||||| ||||||| |||    
T  1275281 ttgtctttttttctttaaatttgtcaaaatattttttggtttcatcgaactattggtcaagtcatgtacaatcttcttgtcgtcctccattaatcttccc 1275380  T
Q  112 gcaag 116  Q
     ||||    
T  1275381 acaag 1275385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 26466162 - 26466384
Alignment:
Q  12 ttgtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctaccc 111  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||  | ||||||||||||||| ||||| ||||||  ||||||||||||||||||||    
T  26466162 ttgttttttgttcttcaaatttaacaaaatatttcttggaagcaccttagtcttggtcaagtcacgtacaatcttcttatcatcctcctttaatctaccc 26466261  T
Q  112 gcaagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcac 211  Q
    ||||||||||||| |||||||    | | |||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||    
T  26466262 gcaagcatgtgtcattctaaagccggctccatctcatggttgtgaactccattaagaatgtttaatctccaatcatttgtttgcctactaagatatccac 26466361  T
Q  212 gaaccatgaacatacacctacat 234  Q
    |||| ||||||||||||||||||    
T  26466362 gaacaatgaacatacacctacat 26466384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 32106524 - 32106754
Alignment:
Q  1 gtcttgtaattttgtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcct 100  Q
    |||||| ||| |||||||||| ||||||||||||||||  ||||||||  |||||||||||||||||||||||||||||||||||| ||| ||| |||||    
T  32106524 gtcttgcaatcttgtcttttgctcttcaaatttaacaac-tattttttcaaagcaccaaactcttggtcaagtcacatacaagctttttgtcattctcct 32106622  T
Q  101 ttaatctacccgcaagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctact 200  Q
    |||||||||| |||| |||||||| |||||||||| | | |||||| || ||||||||||  ||||||||||| |||||| |||||||||||| ||| ||    
T  32106623 ttaatctaccagcaatcatgtgtccttctaaacttggctccatctcatgattgtgaactc--ttaagaatattcaatctccaatcatttgtttaccttct 32106720  T
Q  201 aagatattcacgaaccatgaacatacacctacat 234  Q
    ||||||| |||||||||||||||| |||| ||||    
T  32106721 aagatatccacgaaccatgaacattcacccacat 32106754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 16246646 - 16246865
Alignment:
Q  12 ttgtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctaccc 111  Q
    |||||||||  |||||||||||||||||||||| || ||| |||||   || ||||| ||||||| ||||| ||||||| ||||||| |||||||||||     
T  16246646 ttgtctttttctcttcaaatttaacaaaatattctt-ggatgcaccttgcttttggt-aagtcacgtacaatcttcttgtcatcctcttttaatctaccg 16246743  T
Q  112 gcaagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcac 211  Q
    | ||||||||||| ||||||| |  | | |||| | |||||||||||| |||||| ||| || |||||| | ||||||||||||||||  ||||||||||    
T  16246744 gtaagcatgtgtccttctaaagtcggctccatcgcatggttgtgaacttcattaacaat-ttcaatctccattcatttgtttgcctacacagatattcac 16246842  T
Q  212 gaaccatgaacatacacctacat 234  Q
     ||||||||||||||||| ||||    
T  16246843 taaccatgaacatacacccacat 16246865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 207
Target Start/End: Complemental strand, 25231458 - 25231276
Alignment:
Q  25 ttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtc 124  Q
    ||||||||||||||||||||| ||  |||||||||||  ||||||||||||| ||||| |||||||  ||||||| || ||||||| |||||||||||||    
T  25231458 ttcaaatttaacaaaatatttgttaaaagcaccaaacatttggtcaagtcacgtacaatcttcttggtatcctcccttgatctacctgcaagcatgtgtc 25231359  T
Q  125 tttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatat 207  Q
     ||| |||||| | | | ||||  |||||||||||||||| | |||||| |||||| | |||||||||| |||||||| ||||    
T  25231358 cttccaaacttggcttcgtctcacggttgtgaactccattgaaaatattcaatctccagtcatttgtttccctactaatatat 25231276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 21943258 - 21943467
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| |||||||||||| |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| |     
T  21943258 gtcttttgttcttcaaatttatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggt 21943357  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| ||||||||   | | |||| | ||||||||||||||||| ||||| || |||| | | || ||||||||||||||  ||||| ||| |    
T  21943358 aagaatgtgtccttctaaacccggctccatcccatggttgtgaactccattgagaatgttcaatccccattcctttgtttgcctactttgatatccacta 21943457  T
Q  214 accatgaaca 223  Q
    ||||| ||||    
T  21943458 accataaaca 21943467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 50116657 - 50116866
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| | ||||||||||||||||||  |||| ||||||| | ||||||||||||||||| ||    
T  50116657 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatctaactcttggtcaagtcacgaacaatcttcttgtcgtcctcctttaatctaccggc 50116756  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||| | |||| |||||||||||||||||| || |||||| | || ||| ||||| ||||  ||||| ||| |    
T  50116757 aagaatgtgtccttctaaagccggctccatcgcatggtagtgaactccattaagaatgttcaatctccattcctttatttgcttactttgatatccacta 50116856  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  50116857 atcatgaaca 50116866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 7980106 - 7980326
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| ||||||||||||||||||| ||    
T  7980106 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcatcctcctttaatctaccggc 7980205  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||      | |||  | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  7980206 aagaatgtgtccttctaaagccgactgcattgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 7980305  T
Q  214 accatgaacatacacctacat 234  Q
    | |||||||| ||||| ||||    
T  7980306 atcatgaacaaacacccacat 7980326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 37016081 - 37015872
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   ||||||||||||||||  |||| ||||||| | ||||||||||||||||| ||    
T  37016081 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgcacaatcttcttgtcgtcctcctttaatctaccggc 37015982  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||| | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  37015981 aagaatgtgtccttctaaagccagctccatcgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 37015882  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  37015881 atcatgaaca 37015872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 51663425 - 51663216
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||| | ||||| ||||||| | ||||||||||||||||| ||    
T  51663425 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcgcgtacaatcttcttgtcctcctcctttaatctaccagc 51663326  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||| | ||||||||| ||||||||||||| || |||| | | || ||||||||| ||||  ||||||||| |    
T  51663325 aagaatgtgtcattctaaagccggcttcatcgcatggttgtgagctccattaagaatgttcaatccccattcttttgtttgcttactttgatattcacta 51663226  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  51663225 atcatgaaca 51663216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 38691833 - 38692053
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| | ||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | |||||||||||| |||| ||    
T  38691833 gtcttttgttattcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatttaccggc 38691932  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| | ||||| ||||||| |  | | |||| | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  38691933 aagaacgtgtccttctaaagtcggctccatcgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 38692032  T
Q  214 accatgaacatacacctacat 234  Q
    | |||||||| ||||| ||||    
T  38692033 atcatgaacaaacacccacat 38692053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 46974331 - 46974111
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| |||| |||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | |||||||||||| |||| ||    
T  46974331 gtcttttgttctttaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatgtaccggc 46974232  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| ||||||| |  | | |||| | ||||||| ||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  46974231 aagaatgtgtccttctaaagtcggctccatcgcatggttgtaaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 46974132  T
Q  214 accatgaacatacacctacat 234  Q
    | |||||||| ||||| ||||    
T  46974131 atcatgaacaaacacccacat 46974111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 29355582 - 29355789
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  29355582 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 29355681  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  29355682 aagaatgtgtccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 29355781  T
Q  214 accatgaa 221  Q
    | ||||||    
T  29355782 atcatgaa 29355789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 41455004 - 41454797
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  41455004 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 41454905  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  41454904 aagaatgtgtccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 41454805  T
Q  214 accatgaa 221  Q
    | ||||||    
T  41454804 atcatgaa 41454797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 5079102 - 5078984
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| ||  ||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||    
T  5079102 gtctttggttcttcaaatgtattaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgccgtcctcctttaatctaccggc 5079003  T
Q  114 aagcatgtgtctttctaaa 132  Q
    ||| ||||||| |||||||    
T  5079002 aagaatgtgtccttctaaa 5078984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 13174948 - 13174792
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   ||||||||||||||||  |||| ||||||| | ||||||||||||||||| ||    
T  13174948 gtcttttgttcttcaaatgtatcaaaatatttattggaagcatcttgctcttggtcaagtcacgaacaatcttcttgtcgtcctcctttaatctaccagc 13174849  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaat 170  Q
     || ||||||| | |||||    | | |||| | |||||||||||||||||||||||    
T  13174848 gagaatgtgtcctcctaaagccggctccatcgcatggttgtgaactccattaagaat 13174792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 44619997 - 44620204
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   ||||| |||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  44619997 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctctttgtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 44620096  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  44620097 aagaatgtgtccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 44620196  T
Q  214 accatgaa 221  Q
    | ||||||    
T  44620197 atcatgaa 44620204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 20350614 - 20350416
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  20350614 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 20350515  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| ||||||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  20350514 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgtttaatccccattcctttgtttgcttactttgatatccactaatcatgaa 20350416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 3947364 - 3947562
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  3947364 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 3947463  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  3947464 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 3947562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 3984271 - 3984073
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  3984271 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 3984172  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  3984171 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 3984073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 13630574 - 13630376
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||||| || |||||||||| ||||||||| |   ||||| |||||||||| ||||| ||||||| | ||||||||||||||||| | ||| |||||    
T  13630574 tcttcaaatgtatcaaaatatttcttggaagcatcttgctctttgtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggaaagaatgtg 13630475  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  13630474 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 13630376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 38775018 - 38775216
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  38775018 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 38775117  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  38775118 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 38775216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 44466740 - 44466542
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  44466740 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 44466641  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  44466640 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 44466542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 39914082 - 39914002
Alignment:
Q  36 caaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaag 116  Q
    ||||||||||||| |  |||||||||||||||||||||||| ||||| ||||||| |||||| | ||||||| | ||||||    
T  39914082 caaaatatttttttgttgcaccaaactcttggtcaagtcacgtacaatcttcttgtcatccttcattaatcttctcgcaag 39914002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 25593837 - 25593678
Alignment:
Q  12 ttgtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctaccc 111  Q
    |||||||||  |||||||||||  |||||||||||||||    ||| |||| ||||||||||||||||||| |  |||| | |||||| ||||| | |||    
T  25593837 ttgtcttttcttcttcaaatttgtcaaaatattttttggttttaccgaactattggtcaagtcacatacaatcgccttgtcgtcctccattaatattccc 25593738  T
Q  112 gcaagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaata 171  Q
    ||||| | ||| | | |||||  | |  ||||||  ||||||||||| ||||||||||||    
T  25593737 gcaagaaggtgccctgctaaatatggcaacatcttatggttgtgaacaccattaagaata 25593678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 12649484 - 12649589
Alignment:
Q  25 ttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtc 124  Q
    ||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | | |||  ||||| |||| ||||| |||||||    
T  12649484 ttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtgctc--ttaatttaccggcaagaatgtgtc 12649581  T
Q  125 tttctaaa 132  Q
     |||||||    
T  12649582 cttctaaa 12649589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 6e-58; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 12 - 225
Target Start/End: Complemental strand, 20286178 - 20285965
Alignment:
Q  12 ttgtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctaccc 111  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||    
T  20286178 ttgtcttttgctcttcaaatttaacaaaatatttcttggaagcaccttactcttggttaagtcacatacaatcttcttgtcatcctcctttaatctaccc 20286079  T
Q  112 gcaagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcac 211  Q
    ||||||||||||| |||||||    | | |||| | ||||||||||||||||||||||| || | | || | |||||||||||||||||||||||| |||    
T  20286078 gcaagcatgtgtccttctaaagccggctccatcacatggttgtgaactccattaagaatgttcagtttccattcatttgtttgcctactaagatatccac 20285979  T
Q  212 gaaccatgaacata 225  Q
      ||||||||||||    
T  20285978 ttaccatgaacata 20285965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 23028463 - 23028654
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcaca-------tacaagcttcttgccatcctcctttaatctacccgcaa 115  Q
    ||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||        ||||| ||||||| |||||||| |||||||||||||||    
T  23028463 tcttcaaatttaataaaatattttttgaaagcatcaaactcttggtcaagtcaccaatcatgtacaatcttcttgtcatcctcccttaatctacccgcaa 23028562  T
Q  116 gcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatat 207  Q
    ||||||||  ||||||||||   | |||||| ||||||||||||||||||| |||||| |||||| |||||||||||| |||||||||||||    
T  23028563 gcatgtgttcttctaaacttgccttcatctcatggttgtgaactccattaataatattcaatctccaatcatttgtttccctactaagatat 23028654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 64 - 216
Target Start/End: Original strand, 13157978 - 13158130
Alignment:
Q  64 ttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccat 163  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| || |||| ||   | ||| || ||||||||||||||||    
T  13157978 ttggtgaagtcacatacaagtttcttgtcatcctcctttaatctacccgcaagcatgcgtccttttaaatttgactccatttcatggttgtgaactccat 13158077  T
Q  164 taagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaacc 216  Q
    ||||||| || |||||| |||||||||||||| || |||||||| ||||||||    
T  13158078 taagaatgttcaatctccaatcatttgtttgcttattaagatatccacgaacc 13158130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 18537230 - 18537439
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |  ||||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  18537230 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatctcactcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 18537329  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||  | | |  ||| | ||||||||||||||||||||||| || |||| | | || ||||||| | ||||  ||||| ||| |    
T  18537330 aagaatgtgtccttctaaagctggctcaatcgcatggttgtgaactccattaagaatgttcaatccccattcctttgttttcttactttgatatccacta 18537429  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  18537430 atcatgaaca 18537439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 234
Target Start/End: Complemental strand, 20286650 - 20286455
Alignment:
Q  40 atattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtctttctaaacttcgtt 139  Q
    |||||| ||||| |||||  ||||||||||||||||  ||||| ||| ||| ||||||||||||||||||||||||||||||||| |||||||    | |    
T  20286650 atatttcttggatgcaccttactcttggtcaagtcatgtacaatctttttgtcatcctcctttaatctacccgcaagcatgtgtccttctaaagccggct 20286551  T
Q  140 acatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcac-gaaccatgaacatacacctacat 234  Q
     |||| | ||||||| ||||||||||||||| || |   || | |||||||||||||||||||||||| |||  | ||||||||||||||| ||||    
T  20286550 ccatcacatggttgtaaactccattaagaatgttcaggttccattcatttgtttgcctactaagatatccacttacccatgaacatacacccacat 20286455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 7020774 - 7020892
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   |||||||||||||||||||||| ||||||| | ||||||||||||||||| ||    
T  7020774 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttcctcttggtcaagtcacatacaatcttcttgtcgtcctcctttaatctaccggc 7020873  T
Q  114 aagcatgtgtctttctaaa 132  Q
    ||| ||||||| |||||||    
T  7020874 aagaatgtgtccttctaaa 7020892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 25895995 - 25896204
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| | ||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  25895995 gtcttttgtttttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 25896094  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  25896095 aagaatgtgtccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 25896194  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  25896195 atcatgaaca 25896204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 27866739 - 27866857
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  27866739 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 27866838  T
Q  114 aagcatgtgtctttctaaa 132  Q
    ||| ||||||| |||||||    
T  27866839 aagaatgtgtccttctaaa 27866857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 34078947 - 34078829
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  34078947 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 34078848  T
Q  114 aagcatgtgtctttctaaa 132  Q
    ||| ||||||| |||||||    
T  34078847 aagaatgtgtccttctaaa 34078829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 7799900 - 7800109
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| | ||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | |||||||||| ||||||  |    
T  7799900 gtcttttgtttttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttagtctaccgac 7799999  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||| | ||||||||||||||||||||||| || |||  | | || ||||||||| ||||  ||||| ||| |    
T  7800000 aagaatgtgtccttctaaagccggctccatcgcatggttgtgaactccattaagaatgttcaattcccattcctttgtttgcttactttgatatccacta 7800099  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  7800100 atcatgaaca 7800109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 4202833 - 4202989
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||  ||||||||| |   |||||| ||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  4202833 gtcttttgttcttcaaatgtatcaaaatattacttggaagcatcttgctcttgatcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 4202932  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaat 170  Q
    |||  |||||| |||||||    | | |||| | |||||||||||||||||||||||    
T  4202933 aagagtgtgtccttctaaagccggctccatcgcatggttgtgaactccattaagaat 4202989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 195
Target Start/End: Original strand, 13567005 - 13567177
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | |||| |||||||||||| ||||| |||||    
T  13567005 tcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtccttctttaatctaccggcaagaatgtg 13567104  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgc 195  Q
    || |||||||  | | | |||    ||||||||||||||||||||||| || |||| | | || |||||||||    
T  13567105 tccttctaaagctggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgc 13567177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 223
Target Start/End: Original strand, 1035466 - 1035653
Alignment:
Q  36 caaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtctttctaaactt 135  Q
    |||||||||| ||||||||| |   |||||||||||||||| |||||  |||||| | ||||||||||||||||| ||||| ||||||| |||||||       
T  1035466 caaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatattcttgtcgtcctcctttaatctaccggcaagaatgtgtccttctaaagcc 1035565  T
Q  136 cgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaaca 223  Q
     | | |||  | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||||    
T  1035566 ggctccatggcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaaca 1035653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 11032346 - 11032553
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   || || |||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  11032346 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctttttgtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 11032445  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  11032446 aagaatgtgtcattctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcttttgtttgcttactttgatatccacta 11032545  T
Q  214 accatgaa 221  Q
    | ||||||    
T  11032546 atcatgaa 11032553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 37819771 - 37819978
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||    
T  37819771 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggc 37819870  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||  ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  37819871 aacaatgtgtccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 37819970  T
Q  214 accatgaa 221  Q
    | ||||||    
T  37819971 atcatgaa 37819978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 38859084 - 38859291
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |    | || |||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  38859084 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgttttttgtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 38859183  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||||| | || ||||||||| ||||  ||||| ||| |    
T  38859184 aagaatgtgtccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatctccattcttttgtttgcttactttgatatccacta 38859283  T
Q  214 accatgaa 221  Q
    | ||||||    
T  38859284 atcatgaa 38859291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 108
Target Start/End: Complemental strand, 1036518 - 1036424
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatcta 108  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| |||||  |||||| | |||||||||||||||    
T  1036518 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatattcttgtcgtcctcctttaatcta 1036424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 28885302 - 28885404
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   ||||| |||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  28885302 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctctttgtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 28885401  T
Q  114 aag 116  Q
    |||    
T  28885402 aag 28885404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 25048556 - 25048472
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatct 107  Q
    |||||||||||| ||||||||||| |||   || | |||| |||||||||||| |||||| ||||||| | |||||| |||||||    
T  25048556 tcttcaaatttatcaaaatattttatggtttcaacgaactattggtcaagtcatatacaatcttcttgtcgtcctccattaatct 25048472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 20287437 - 20287403
Alignment:
Q  12 ttgtcttttggtcttcaaatttaacaaaatatttt 46  Q
    |||||||||| ||||||||||||||||||||||||    
T  20287437 ttgtcttttgctcttcaaatttaacaaaatatttt 20287403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 9376677 - 9376729
Alignment:
Q  24 cttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcac 76  Q
    ||||||||| | ||||||||| || ||  ||||||||||||||||||||||||    
T  9376677 cttcaaattcatcaaaatattcttaggtggcaccaaactcttggtcaagtcac 9376729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 5e-43; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 204
Target Start/End: Complemental strand, 6182845 - 6182653
Alignment:
Q  12 ttgtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctaccc 111  Q
    |||||||||  |||| |||||||||||||||||||||| |||||||||||||||||||||||||  |||||  |||||| || | ||| ||||| |||      
T  6182845 ttgtctttttctcttaaaatttaacaaaatattttttgaaagcaccaaactcttggtcaagtcatgtacaattttcttgtcaccatcccttaatatactt 6182746  T
Q  112 gcaagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaaga 204  Q
    |||||||| |||| |||||||||| | | |||||| |||||||||||||||| ||||||||| |||||| |||| ||||||| ||||||||||    
T  6182745 gcaagcatatgtccttctaaacttggcttcatctcatggttgtgaactccatcaagaatattcaatctccaatcgtttgtttccctactaaga 6182653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 4976922 - 4976713
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | |||||||||| |||||| ||    
T  4976922 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttagtctaccggc 4976823  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| |||||||||||||||    | | |||| | ||||||  ||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  4976822 aagaatgtgtctttctaaagccggctccatcgcatggttgcaaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 4976723  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  4976722 atcatgaaca 4976713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 18580222 - 18580431
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   |||||||||||||||||||||| ||||||| | ||||||||||||||| | ||    
T  18580222 gtctttagttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacatacaatcttcttgtcgtcctcctttaatctatcggc 18580321  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||  | ||||||||||||||||||||||| |||||||   | || ||||||||| ||||  ||||| ||| |    
T  18580322 aagaatgtgtcattctaaagccggcttcattgcatggttgtgaactccattaagaatgtttaatcctcattcctttgtttgcttactttgatatccacta 18580421  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  18580422 atcatgaaca 18580431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 4978848 - 4979057
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | || ||||||| ||| |  ||    
T  4978848 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcatcctttagtctgctggc 4978947  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| ||||||| |  | | |||| | |||||| |||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  4978948 aagaatgtgtccttctaaagtcggctccatcgcatggttgggaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 4979047  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  4979048 atcatgaaca 4979057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 11502673 - 11502517
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | || |||||||||||||| ||    
T  11502673 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcttcctttaatctaccggc 11502574  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaat 170  Q
    | | ||||||| |||||||    | | |||| | ||| |||||||||||||||||||    
T  11502573 atgaatgtgtccttctaaagccggctccatcgcatgggtgtgaactccattaagaat 11502517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 9891189 - 9890982
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   ||||| |||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  9891189 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctctttgtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 9891090  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  9891089 aagaatgtgtccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 9890990  T
Q  214 accatgaa 221  Q
    | ||||||    
T  9890989 atcatgaa 9890982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 19072551 - 19072661
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| | ||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  19072551 gtcttttgtttttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 19072650  T
Q  114 aagcatgtgtc 124  Q
    ||| |||||||    
T  19072651 aagaatgtgtc 19072661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 21471961 - 21471752
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| || |||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | |||||||||| |||| |  |    
T  21471961 gtcttttgttcatcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttattctatcttc 21471862  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| |||||||||| |||| ||   | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  21471861 aagaatgtgtctttttaaagttgtctccattgtatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 21471762  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  21471761 atcatgaaca 21471752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 51643392 - 51643603
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||||||| |||||     |||||||||||||||| ||||| ||||||| | ||||||||||||||||  ||    
T  51643392 gtcttttgttcttcaaatgtatcaaaatattttttgaaagcattttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctactggc 51643491  T
Q  114 aagcatgtgtctttctaaa-cttcgttacatctcttggttgtg-aactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcac 211  Q
    ||| ||||||| || |||| |   | | |||| | || ||||| ||||||||||||||| || |||||| | || ||||||||| ||||  ||||| |||    
T  51643492 aagaatgtgtccttataaagccgggctccatcgcatgtttgtgaaactccattaagaatgttcaatctcaattcctttgtttgcttactttgatatccac 51643591  T
Q  212 gaaccatgaaca 223  Q
     || ||||||||    
T  51643592 taatcatgaaca 51643603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 3404957 - 3404839
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   ||||| |||||||||| ||||| ||||||| | ||||||||||||||||  ||    
T  3404957 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctctttgtcaagtcacgtacaatcttcttgtcgtcctcctttaatctactggc 3404858  T
Q  114 aagcatgtgtctttctaaa 132  Q
    ||| ||||||| |||||||    
T  3404857 aagaatgtgtccttctaaa 3404839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 41024366 - 41024248
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   ||||| |||||||||| ||||| ||||||  | ||||||||||||||||| ||    
T  41024366 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctctttgtcaagtcacgtacaatcttcttttcgtcctcctttaatctacctgc 41024267  T
Q  114 aagcatgtgtctttctaaa 132  Q
    ||| ||||||| |||||||    
T  41024266 aagaatgtgtccttctaaa 41024248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 4769282 - 4769178
Alignment:
Q  29 aatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtctttc 128  Q
    |||||| |||||||||| ||| ||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| | ||| ||||||| |||    
T  4769282 aatttatcaaaatatttcttgaaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggtaagaatgtgtccttc 4769183  T
Q  129 taaac 133  Q
    |||||    
T  4769182 taaac 4769178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 49565367 - 49565565
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||| | ||||| |||||    
T  49565367 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctatcggcaagaatgtg 49565466  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  49565467 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 49565565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 38463731 - 38463821
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaa 104  Q
    ||||||||  |||||||| || |||||||||||||||||||| |   |||||||||||||||| | ||| ||||||| | |||||||||||    
T  38463731 gtcttttgtccttcaaatgtatcaaaatattttttggaagcatcttgctcttggtcaagtcacgtgcaatcttcttgtcgtcctcctttaa 38463821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 17140622 - 17140547
Alignment:
Q  148 tggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaaca 223  Q
    ||||||||||||||||||||||| || |||| | | || ||||||||||||||  ||||| ||| |||||||||||    
T  17140622 tggttgtgaactccattaagaatgttcaatccccattcctttgtttgcctactttgatatccactaaccatgaaca 17140547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 224
Target Start/End: Original strand, 17997064 - 17997276
Alignment:
Q  12 ttgtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctaccc 111  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||   |||||||||||||||| ||||| ||||||  |||||||||||||||||||     
T  17997064 ttgtcttttgctcttcaaatttatcaaaatatttcttggaagcaccttgctcttggtcaagtcacgtacaatcttcttatcatcctcctttaatctacca 17997163  T
Q  112 gcaagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcac 211  Q
    ||||||||||||| |||||||    | | |||| | |||||| ||||| ||| |||||| || |||||| | || |||||||| |||||||||||| |||    
T  17997164 gcaagcatgtgtccttctaaagccggctccatcgcatggttgcgaacttcatgaagaatgttcaatctccattcctttgtttgtctactaagatatccac 17997263  T
Q  212 gaaccatgaacat 224  Q
     |||| |||||||    
T  17997264 taaccttgaacat 17997276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 41007874 - 41008083
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  41007874 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 41007973  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | |||||| | ||||||||||||||||||||||| || ||||   | || ||||||||| ||||  ||||| ||| |    
T  41007974 aagaatgtgtcattctaaagccggctacatcgcatggttgtgaactccattaagaatgttcaatcctcattcctttgtttgcttactttgatatccacta 41008073  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  41008074 atcatgaaca 41008083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 200
Target Start/End: Complemental strand, 436478 - 436292
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  436478 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 436379  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctact 200  Q
    ||| ||||||| |||||||    | | |||| | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||    
T  436378 aagaatgtgtccttctaaagccggctccatcgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttact 436292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 12907386 - 12907595
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| | ||||||| || || ||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  12907386 gtcttttgttattcaaatgtatcagaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 12907485  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||| | ||||||||||||||||||||||| || |||||| | || ||||||||| ||||  ||||| ||| |    
T  12907486 aagaatgtgtccttctaaagccggctccatcgcatggttgtgaactccattaagaatgttcaatctccattcctttgtttgcttactttgatatccacta 12907585  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  12907586 atcatgaaca 12907595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 11692716 - 11692917
Alignment:
Q  22 gtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgt 121  Q
    |||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||||| ||||    
T  11692716 gtcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggcaagaatgt 11692815  T
Q  122 gtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    ||| ||||||| |  | |  ||| | ||||||||||||||||||||||| || ||||   | || ||||||||| ||||  ||||| ||| || ||||||    
T  11692816 gtccttctaaagtcggctcgatcacatggttgtgaactccattaagaatgttcaatcctcattcctttgtttgcttactttgatatccactaatcatgaa 11692915  T
Q  222 ca 223  Q
    ||    
T  11692916 ca 11692917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 43949176 - 43949385
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||  ||||| ||||||||| ||||||||||||||||| ||    
T  43949176 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcatgtacaatcttcttgccgtcctcctttaatctaccggc 43949275  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | | || | ||||||||||||||||||| ||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  43949276 aagaatgtgtccttctaaagccggctccttcgcatggttgtgaactccattaataatgttcaatccccattcctttgtttgcttactttgatatccacta 43949375  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  43949376 atcatgaaca 43949385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 7264199 - 7263992
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| |||||| || |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  7264199 gtctttggttcttcaaatgtatcaaaatatttcttggaaccatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 7264100  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    ||| |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  7264099 aagaatgtgtccttctaaagccggttccatgagatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 7264000  T
Q  214 accatgaa 221  Q
    | ||||||    
T  7263999 atcatgaa 7263992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 3802460 - 3802578
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  3802460 gtctttggttcttcaaatgtatcaaaatatttattggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 3802559  T
Q  114 aagcatgtgtctttctaaa 132  Q
    ||| ||||||| |||||||    
T  3802560 aagaatgtgtccttctaaa 3802578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 27275254 - 27275372
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  27275254 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 27275353  T
Q  114 aagcatgtgtctttctaaa 132  Q
    ||| ||||||| |||||||    
T  27275354 aagaatgtgtccttctaaa 27275372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 24604983 - 24605192
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| |||||  |||||| | |||||||||| ||||||  |    
T  24604983 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaattttcttgtcgtcctcctttagtctaccgac 24605082  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||  |||||||    | | |||| | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  24605083 aagaatgtgtacttctaaagccggctccatcgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 24605182  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  24605183 atcatgaaca 24605192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 24750825 - 24750616
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||| |||||| |||  ||||| ||||||| ||||||||||||||||||| ||    
T  24750825 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctctcggtcaattcatgtacaatcttcttgtcatcctcctttaatctaccggc 24750726  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  24750725 aagaatgtgtccttctaaatccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 24750626  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  24750625 atcatgaaca 24750616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 28354796 - 28355005
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||  ||||||||| || |||||||||| ||||||||| |   ||| |||||||||||| ||||| ||||||| | |||||||||| |||||| ||    
T  28354796 gtcttttattcttcaaatgtatcaaaatatttcttggaagcatcttgctcatggtcaagtcacgtacaatcttcttgtcgtcctcctttagtctaccagc 28354895  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||| | ||||| ||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  28354896 aagaatgtgtcattctaaagcaggctccatcgcatggttatgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 28354995  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  28354996 atcatgaaca 28355005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 34920676 - 34920794
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | |||||||||||| |||| |     
T  34920676 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatttaccggt 34920775  T
Q  114 aagcatgtgtctttctaaa 132  Q
    ||| ||||||| |||||||    
T  34920776 aagaatgtgtccttctaaa 34920794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 45476522 - 45476407
Alignment:
Q  17 ttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaag 116  Q
    ||||| ||||||||  || |||||||||| ||| ||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| |||||    
T  45476522 ttttgttcttcaaacgtatcaaaatatttcttgtaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggcaag 45476423  T
Q  117 catgtgtctttctaaa 132  Q
     ||||||| |||||||    
T  45476422 aatgtgtccttctaaa 45476407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 212344 - 212542
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  212344 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 212443  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  212444 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 212542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 10623357 - 10623555
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  10623357 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 10623456  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  10623457 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 10623555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 5348325 - 5348216
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  5348325 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 5348226  T
Q  123 tctttctaaa 132  Q
    || |||||||    
T  5348225 tccttctaaa 5348216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 41561170 - 41561061
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  41561170 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 41561071  T
Q  123 tctttctaaa 132  Q
    || |||||||    
T  41561070 tccttctaaa 41561061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 39795137 - 39794930
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   || || |||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  39795137 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctttttgtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 39795038  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||| | |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  39795037 aagaatgtgcccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcttttgtttgcttactttgatatccacta 39794938  T
Q  214 accatgaa 221  Q
    | ||||||    
T  39794937 atcatgaa 39794930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 38946921 - 38946723
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || ||||||||||  |||||||| |   |||||||||||||||| ||| | |||||||   ||||||||||||||||| ||||| |||||    
T  38946921 tcttcaagtgtatcaaaatatttcatggaagcatcttgctcttggtcaagtcacgtacgatcttcttgttgtcctcctttaatctaccggcaagaatgtg 38946822  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  38946821 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 38946723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 34920802 - 34920875
Alignment:
Q  150 gttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaaca 223  Q
    ||||||||||||||||||||| || |||||| | || ||||||||| ||||  ||||| ||| || ||||||||    
T  34920802 gttgtgaactccattaagaatgttcaatctccattcctttgtttgcttactttgatatccactaatcatgaaca 34920875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 1098720 - 1098788
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaa 82  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||| ||||||||||| |||||    
T  1098720 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctctcggtcaagtcacgtacaa 1098788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 8400753 - 8400544
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| |||||||||||| ||||||||||||||| | || |   |||||||||||||||| ||||| ||||||| |||||||||||||| |||| ||    
T  8400753 gtcttttgttcttcaaatttatcaaaatattttttggtaacatcttgctcttggtcaagtcacctacaatcttcttgtcatcctcctttaatgtaccagc 8400654  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||| | ||||||||||||||||| | ||| || |||| | | || ||||||||||||||||||||| ||| |    
T  8400653 aagaatgtgtccttctaaagccggctccatcgcatggttgtgaactccattgaaaatgttcaatccccattcttttgtttgcctactaagatatccacta 8400554  T
Q  214 accatgaaca 223  Q
    ||||||||||    
T  8400553 accatgaaca 8400544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 43827500 - 43827720
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| |||||||||||| |||||||||| ||||||||| |   | |||||||||||||| ||||| ||||||  | ||||||||||||||||| |     
T  43827500 gtcttttgttcttcaaatttatcaaaatatttcttggaagcatcttgcacttggtcaagtcacgtacaatcttcttttcgtcctcctttaatctaccggt 43827599  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||  | | | | || | ||||||||||||||||||||||| || |||| | | || |||||||| |||||||||||| ||| |    
T  43827600 aagaatgtgtcattctaaagctggctccttcgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgtctactaagatatccacta 43827699  T
Q  214 accatgaacatacacctacat 234  Q
    |||||||||| ||||| ||||    
T  43827700 accatgaacaaacacccacat 43827720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 47062050 - 47061841
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||||||||| ||| ||| | ||||||||||||||||| ||    
T  47062050 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacatacaatctttttgtcgtcctcctttaatctaccggc 47061951  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| ||| ||| |  | | |||| | ||||||||||||||||||||||| || ||||   | || ||||||||| ||||  ||||| ||| |    
T  47061950 aagaatgtgtccttcaaaagtcggctccatcgcatggttgtgaactccattaagaatgttcaatcctcattcctttgtttgcttactttgatatccacta 47061851  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  47061850 atcatgaaca 47061841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 18106555 - 18106348
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   ||||| |||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  18106555 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctctttgtcaagtcacgtacaatcttcttgtcgtcctcctttaatctacctgc 18106456  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  18106455 aagaatgtgtccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 18106356  T
Q  214 accatgaa 221  Q
    | ||||||    
T  18106355 atcatgaa 18106348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 37 - 234
Target Start/End: Complemental strand, 21800156 - 21799959
Alignment:
Q  37 aaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtctttctaaacttc 136  Q
    ||||||||||||||| |||||   |||||| | ||||||| || ||  ||||||  ||||||||||||||||||  ||| |||||||| |||||||        
T  21800156 aaaatattttttggatgcaccttgctcttgattaagtcacgtataattttcttgttatcctcctttaatctaccgacaaacatgtgtccttctaaagccg 21800057  T
Q  137 gttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaacatacacctacat 234  Q
      | |||| | ||||||||||||||||||| ||| || |||||| | |  ||||||| ||||||||||||| ||| |||||||||||| |||| ||||    
T  21800056 actccatcgcatggttgtgaactccattaacaatgttcaatctccattgctttgttttcctactaagatatccactaaccatgaacatgcacccacat 21799959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 617652 - 617850
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  617652 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 617751  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  617752 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 617850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 15060780 - 15060662
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||  ||||||||| |   ||||| |||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  15060780 gtctttggttcttcaaatgtatcaaaatattccttggaagcatcttgctctttgtcaagtcacttacaatcttcttgtcgtcctcctttaatctaccggc 15060681  T
Q  114 aagcatgtgtctttctaaa 132  Q
    ||| ||||||| |||||||    
T  15060680 aagaatgtgtccttctaaa 15060662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 30787697 - 30787499
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  30787697 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 30787598  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  30787597 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 30787499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 43623038 - 43623236
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  43623038 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 43623137  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  43623138 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 43623236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 45764537 - 45764339
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  45764537 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 45764438  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  45764437 tcattctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 45764339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 20908433 - 20908568
Alignment:
Q  36 caaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtctttctaaactt 135  Q
    ||||||||||||| |  |||||||||||||||| |||||||  |||| ||||||| |||||||| ||||||| || ||||| ||||| | ||||||  ||    
T  20908433 caaaatatttttttgttgcaccaaactcttggtaaagtcacgcacaatcttcttgtcatcctcccttaatcttcctgcaagaatgtgcccttctaacatt 20908532  T
Q  136 cgttacatctcttggttgtgaactccattaagaata 171  Q
         | |||| ||||||||||||||||||||||||    
T  20908533 gccgtcgtctcatggttgtgaactccattaagaata 20908568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 42500574 - 42500367
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||| ||||| |    |||| |||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  42500574 gtctttggttcttcaaatgtatcaaaatatttcttgaaagcatcttgatctttgtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 42500475  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| |||| || |||||||    | | |||    ||||||||||||||||||||||| || |||||| | || ||||||||| ||||  ||||| ||| |    
T  42500474 aagaatgtttccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatctccattcctttgtttgcttactttgatatccacta 42500375  T
Q  214 accatgaa 221  Q
    | ||||||    
T  42500374 atcatgaa 42500367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 3762062 - 3761964
Alignment:
Q  24 cttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||||| | |||||||||||||||  ||| ||||||||||||||||| || || || ||| ||| |||| ||| ||||||| ||| ||||||||||    
T  3762062 cttcaaattcatcaaaatattttttggctgcatcaaactcttggtcaagttacctagaatctttttgtcatcttcccttaatcttccctcaagcatgtg 3761964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 8194172 - 8194276
Alignment:
Q  12 ttgtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctaccc 111  Q
    |||||||||  |||||||||||  |||||||||||||||   |||| |||| ||| ||||||||  ||||| ||||||| | |||||| ||||||| |||    
T  8194172 ttgtcttttcttcttcaaatttgtcaaaatattttttggtttcaccgaactattgctcaagtcatgtacaatcttcttgtcgtcctccattaatcttccc 8194271  T
Q  112 gcaag 116  Q
    |||||    
T  8194272 gcaag 8194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 16794516 - 16794600
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatct 107  Q
    |||||||||||  |||||||||||||||   ||||||||| ||||||||||||  ||||| ||||||| | |||||| |||||||    
T  16794516 tcttcaaatttgtcaaaatattttttggtttcaccaaactattggtcaagtcatgtacaatcttcttgtcgtcctccattaatct 16794600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 7169067 - 7168858
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| | ||||| | ||||||||||||||||  ||    
T  7169067 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcatcttgtcgtcctcctttaatctactagc 7168968  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| |||| || ||||||| |  | | |||| | ||||||||||||||||||||||| || |||| | | || ||||||||||||||  ||||| ||| |    
T  7168967 aagaatgtatccttctaaagtcggctccatcgcatggttgtgaactccattaagaatgttcaatccccactcctttgtttgcctactttgatatccacta 7168868  T
Q  214 accatgaaca 223  Q
    ||||||||||    
T  7168867 accatgaaca 7168858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 35965639 - 35965848
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  35965639 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 35965738  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||| | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  35965739 aagaatgtgtccttctaaagccggctccatcgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 35965838  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  35965839 atcatgaaca 35965848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 39751922 - 39752131
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  39751922 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggc 39752021  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    |   || |||| |||||||    ||| |||  | ||||||||||||||||||||||| || |||| | | |||||||||||| ||||  ||||| ||| |    
T  39752022 ataaatatgtcattctaaagccggttccattgcatggttgtgaactccattaagaatgttcaatccccattcatttgtttgcttactttgatatccacca 39752121  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  39752122 atcatgaaca 39752131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 45455540 - 45455334
Alignment:
Q  17 ttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaag 116  Q
    ||||| ||||||||| || |||||||||| |||||||||     |||||||||||||||| ||||| ||||||| | ||||||||||||||||| |||||    
T  45455540 ttttgttcttcaaatgtatcaaaatatttcttggaagcattttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggcaag 45455441  T
Q  117 catgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaacc 216  Q
     ||||||| ||||||| |  | | |||| | ||||||| ||||||||||||||| |  |||| | | || ||||||||| ||||  ||||| ||| || |    
T  45455440 aatgtgtccttctaaagtcggctccatcgcatggttgttaactccattaagaatgtccaatccccattcctttgtttgcttactttgatatccactaatc 45455341  T
Q  217 atgaaca 223  Q
    |||||||    
T  45455340 atgaaca 45455334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 43370934 - 43370725
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | |||||||||| |||||| ||    
T  43370934 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttagtctaccggc 43370835  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||      | |||| | ||||||||||||||||||||||| || || | | | || ||||||||| ||||  ||||| ||| |    
T  43370834 aagaatgtgtccttctaaagccgactccatcgcatggttgtgaactccattaagaatgttcaaaccccattcctttgtttgcttactttgatatccacta 43370735  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  43370734 atcatgaaca 43370725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 43689065 - 43689274
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| || |||||| |   |||||||||||||||| ||||| ||||||| | ||||| ||||||||||| ||    
T  43689065 gtcttttgttcttcaaatgtatcaaaatatttcttcgaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcttttaatctaccggc 43689164  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||      | |||| | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  43689165 aagaatgtgtccttctaaagccgactccatcgcatggttgtgaactccattaagaatgttaaatccccattcctttgtttgcttactttgatatccacta 43689264  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  43689265 atcatgaaca 43689274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 14401676 - 14401825
Alignment:
Q  24 cttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcaca--tacaagcttcttgccatcctcctttaatctacccgcaagcatgt 121  Q
    ||||||||| | |||||||||||||||  ||||||||||||||||||||||| |  ||||| ||||||| |||| ||| ||||||| || ||||| ||||    
T  14401676 cttcaaattcatcaaaatattttttggtggcaccaaactcttggtcaagtcatatgtacaatcttcttgtcatcatcccttaatcttcctgcaagaatgt 14401775  T
Q  122 gtctttctaaacttcgttacatctcttggttgtgaactccattaagaata 171  Q
    | | |||||||||| |   ||  || ||||||||||||||||||||||||    
T  14401776 gccattctaaacttggcaccaattcatggttgtgaactccattaagaata 14401825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 22581048 - 22580914
Alignment:
Q  36 caaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtctttctaaactt 135  Q
    |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||||| ||||||| ||||||| |     
T  22581048 caaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctaccggcaagaatgtgtccttctaaagtc 22580949  T
Q  136 cgttacatctcttggttgtgaactccattaagaat 170  Q
     | | |||| | ||||||| |||||||||||||||    
T  22580948 ggctccatcgcatggttgtaaactccattaagaat 22580914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 1115939 - 1115821
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||    
T  1115939 gtctttggttcttcaattgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtactatcttcttgtcgtcctcctttaatctaccggc 1115840  T
Q  114 aagcatgtgtctttctaaa 132  Q
    ||| ||||||| |||||||    
T  1115839 aagaatgtgtccttctaaa 1115821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 7341237 - 7341039
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  7341237 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 7341138  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  7341137 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 7341039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 8422759 - 8422957
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  8422759 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 8422858  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    | ||||||||||||||||||||| ||||||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  8422859 tcattctaaagccggctccatgggatagttgtgaactccattaagaatgtttaatccccattcctttgtttgcttactttgatatccactaatcatgaa 8422957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 30304513 - 30304711
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  30304513 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 30304612  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  30304613 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 30304711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 32377811 - 32378009
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  32377811 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 32377910  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  32377911 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 32378009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 32431768 - 32431966
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  32431768 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 32431867  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  32431868 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 32431966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 200
Target Start/End: Original strand, 2145948 - 2146070
Alignment:
Q  78 tacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaat 177  Q
    ||||| ||||||| | ||||||||||||||||| ||||| || |||| ||||||| |  | | |||| | ||||||||||||||||||| ||| || |||    
T  2145948 tacaatcttcttgtcgtcctcctttaatctaccggcaagaatatgtccttctaaagtcggctccatcgcatggttgtgaactccattaaaaatgttcaat 2146047  T
Q  178 ctcgaatcatttgtttgcctact 200  Q
    ||| | |||||||||||| ||||    
T  2146048 ctccattcatttgtttgcttact 2146070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 17236 - 17027
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | |||||||||| |||||| ||    
T  17236 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacttacaatcttcttgtcgtcctcctttagtctaccggc 17137  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||| | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  17136 aagaatgtgtccttctaaagccggctccatcgcatggttgtgaactccattaagaatgttcaatccctattcctttgtttgcttactttgatatccacta 17037  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  17036 atcatgaaca 17027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 6e-27; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 18607163 - 18606954
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| | ||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||| |  |    
T  18607163 gtcttttgttattcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctatcgac 18607064  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| ||||||| |  | | |||| | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  18607063 aagaatgtgtccttctaaagtcggctccatcgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 18606964  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  18606963 atcatgaaca 18606954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 24220335 - 24220128
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaa--ctcttggtcaagtcacatacaagcttcttgccatcctcctttaatctaccc 111  Q
    |||||||| | |||||||||| |||||||||| ||||||||| |  |  |||||||||||||||| || ||  |||||| | |||||||||||||||||     
T  24220335 gtcttttgtttttcaaatttatcaaaatatttcttggaagcatcttatgctcttggtcaagtcacgtataattttcttgtcgtcctcctttaatctaccg 24220236  T
Q  112 gcaagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcac 211  Q
     |||| ||||||| |||||||      | |||| | |||||||||||| |||||||||| || |||| | | |||||||||| ||||||||||||| |||    
T  24220235 acaagaatgtgtccttctaaagccgactccatcgcatggttgtgaactgcattaagaattttcaatccccattcatttgttttcctactaagatatccac 24220136  T
Q  212 gaaccatg 219  Q
     |||||||    
T  24220135 taaccatg 24220128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 31147489 - 31147333
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| ||  ||||||||  ||||||||| |   |||||| ||||||||| ||||| ||||||| ||| ||||||||||||||| ||    
T  31147489 gtcttttgttcttcaaatgtataaaaatattacttggaagcatcttgctcttgatcaagtcacgtacaatcttcttgtcattctcctttaatctaccggc 31147390  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaat 170  Q
    ||| ||||||| ||||||| |  | | |||| | |||||||||||||||||||||||    
T  31147389 aagaatgtgtccttctaaagtcggctccatcgcatggttgtgaactccattaagaat 31147333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 28251063 - 28250856
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||| | ||    
T  28251063 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttaatctatcggc 28250964  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||  | | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  28250963 aagaatgtgtccttctaaagctggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 28250864  T
Q  214 accatgaa 221  Q
    | ||||||    
T  28250863 atcatgaa 28250856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 29287842 - 29288028
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | |||||||||| |||||| ||    
T  29287842 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttagtctaccggc 29287941  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctact 200  Q
    ||| ||||||| || ||||      | |||| | ||||||||||||||||||||||| || |||| | | || ||||||||| ||||    
T  29287942 aagaatgtgtccttataaagccgactccatcgcatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttact 29288028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 21358241 - 21358359
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||  ||||| ||||||| | ||||||||||||||| | ||    
T  21358241 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcatgtacaatcttcttgtcgtcctcctttaatctatcggc 21358340  T
Q  114 aagcatgtgtctttctaaa 132  Q
    ||| ||||||| |||||||    
T  21358341 aagaatgtgtccttctaaa 21358359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 23962223 - 23962341
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||  ||||| ||||||| | ||||||||||||||| | ||    
T  23962223 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcatgtacaatcttcttgtcgtcctcctttaatctatcggc 23962322  T
Q  114 aagcatgtgtctttctaaa 132  Q
    ||| ||||||| |||||||    
T  23962323 aagaatgtgtccttctaaa 23962341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 1611654 - 1611852
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  1611654 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 1611753  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  1611754 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 1611852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 223
Target Start/End: Complemental strand, 7362299 - 7362137
Alignment:
Q  61 ctcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtctttctaaacttcgttacatctcttggttgtgaactc 160  Q
    |||||||||||||||| ||||| ||||||| | |||||||||| |||||| ||||| ||||||| ||||||| |    | |||| | |||||||||||||    
T  7362299 ctcttggtcaagtcacgtacaatcttcttgtcgtcctcctttagtctaccggcaagaatgtgtcattctaaagtcgactccatcgcatggttgtgaactc 7362200  T
Q  161 cattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaaca 223  Q
    |||||||||| || ||||   | || ||||||||| ||||  ||||| ||| || ||||||||    
T  7362199 cattaagaatgttcaatccacattcctttgtttgcttactttgatatccactaatcatgaaca 7362137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 34111598 - 34111713
Alignment:
Q  56 ccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtctttctaaacttcgttacatctcttggttgtg 155  Q
    ||||||||||||||||||||| ||||| ||||| | |||| ||||||||||| || ||||| || |  | ||||||  || |   |||||| ||||||||    
T  34111598 ccaaactcttggtcaagtcacgtacaatcttctagtcatcttcctttaatcttcctgcaagaattttcccttctaactttggcgccatctcatggttgtg 34111697  T
Q  156 aactccattaagaata 171  Q
    ||||||||||||||||    
T  34111698 aactccattaagaata 34111713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 35243636 - 35243561
Alignment:
Q  148 tggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaaca 223  Q
    ||||||||||||||||||||||| || |||| | | |||||||||||| ||||  ||||| ||| || ||||||||    
T  35243636 tggttgtgaactccattaagaatgttcaatccccattcatttgtttgcttactttgatatccactaatcatgaaca 35243561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 13387722 - 13387795
Alignment:
Q  148 tggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| |||||| ||||||    
T  13387722 tggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacgaatcatgaa 13387795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 16251 - 16369
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | ||||||||||||||||| ||    
T  16251 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacaatcttcttgtcttcctcctttaatctaccggc 16350  T
Q  114 aagcatgtgtctttctaaa 132  Q
    ||| ||||||| |||||||    
T  16351 aagaatgtgtccttctaaa 16369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 12429 - 12220
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||||| ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||||| ||||||| | |||||| |||||||||| |     
T  12429 gtcttttgttcttcaaatgtatcaaaatatttcttggaagcatctttctcttggtcaagtcacgtacaatcttcttgtcgtcctccattaatctaccgga 12330  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||  | ||||| ||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  12329 aagaatgtgtccttctaaagccagctccatggcatggttttgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 12230  T
Q  214 accatgaaca 223  Q
    | ||||||||    
T  12229 atcatgaaca 12220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 2048 - 1841
Alignment:
Q  14 gtcttttggtcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgc 113  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||    
T  2048 gtctttggttcttcaaatgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggc 1949  T
Q  114 aagcatgtgtctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacga 213  Q
    ||| ||||||| |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| |    
T  1948 aagaatgtgtccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccacta 1849  T
Q  214 accatgaa 221  Q
    | ||||||    
T  1848 atcatgaa 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 33967 - 33769
Alignment:
Q  23 tcttcaaatttaacaaaatattttttggaagcaccaaactcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtg 122  Q
    ||||||| | || |||||||||| ||||||||| |   |||||||||||||||| ||| | ||||||| | ||||||||||||||||| ||||| |||||    
T  33967 tcttcaagtgtatcaaaatatttcttggaagcatcttgctcttggtcaagtcacgtacgatcttcttgtcgtcctcctttaatctaccggcaagaatgtg 33868  T
Q  123 tctttctaaacttcgttacatctcttggttgtgaactccattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaa 221  Q
    || |||||||    | | |||    ||||||||||||||||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||    
T  33867 tccttctaaagccggctccatgggatggttgtgaactccattaagaatgttcaatccccattcctttgtttgcttactttgatatccactaatcatgaa 33769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 223
Target Start/End: Original strand, 111 - 273
Alignment:
Q  61 ctcttggtcaagtcacatacaagcttcttgccatcctcctttaatctacccgcaagcatgtgtctttctaaacttcgttacatctcttggttgtgaactc 160  Q
    |||||||||||||||| ||||| ||||||| | | |||||||| ||||| || ||| ||||||| |||||||    | | |||| | |||||||||||||    
T  111 ctcttggtcaagtcacgtacaatcttcttgtcgttctcctttagtctactcgtaagaatgtgtccttctaaagccggctccatcgcatggttgtgaactc 210  T
Q  161 cattaagaatatttaatctcgaatcatttgtttgcctactaagatattcacgaaccatgaaca 223  Q
    |||||||||| || |||| | | || ||||||||| ||||  ||||| ||| || ||||||||    
T  211 cattaagaatgttcaatcaccattcctttgtttgcttactttgatatccactaatcatgaaca 273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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