View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6871A_low_22 (Length: 401)

Name: NF6871A_low_22
Description: NF6871A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6871A_low_22
NF6871A_low_22
[»] chr7 (11 HSPs)
chr7 (22-401)||(35938762-35939141)
chr7 (62-362)||(35981485-35981785)
chr7 (62-362)||(36002897-36003197)
chr7 (59-353)||(36221907-36222201)
chr7 (53-354)||(36217915-36218216)
chr7 (59-353)||(32727039-32727333)
chr7 (59-359)||(35957461-35957761)
chr7 (59-362)||(35976916-35977219)
chr7 (59-362)||(35998328-35998631)
chr7 (64-354)||(35946258-35946548)
chr7 (104-333)||(35951937-35952166)
[»] chr1 (2 HSPs)
chr1 (61-362)||(18125183-18125484)
chr1 (83-381)||(18117552-18117850)
[»] chr2 (1 HSPs)
chr2 (59-351)||(26328951-26329243)


Alignment Details
Target: chr7 (Bit Score: 352; Significance: 0; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 22 - 401
Target Start/End: Original strand, 35938762 - 35939141
Alignment:
Q  22 aagtttagcaatactgcatctataagtgcggaaggtgtaatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatca 121  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35938762 aagtttagcaatactgcatctataatcgcggaaggtgtaatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggcatttgatca 35938861  T
Q  122 tagcttaattttagtgcaggtaaaatatcattttgcatctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttg 221  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35938862 tagcttaattttagtgcaggtaaaatatcattttgcttctgttctaaattccatatctcagaatctcttacaaattcccacttatttaaatcaaattttg 35938961  T
Q  222 aaaacagagaacttcctaatgttttcacagccagtggaactccttgacattttttcacaatttcctttgcaatcttcacaagatttggatatttttcttc 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35938962 aaaacagagaacttcctaatgttttcacagccagtggaactccttgacattttttcacaatttcctttgcaatcttcacaagatttggatatttttcttc 35939061  T
Q  322 ttcaccttccttaaatgctgatttgacaaacagtgataaactgttctctttagaaaggccacgtaatagatacgagggaa 401  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  35939062 ttcaccttccttaaatgctgatttgacaaacagagataaactgttctctttagaaaggccatgtaatagatacgagggaa 35939141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 62 - 362
Target Start/End: Original strand, 35981485 - 35981785
Alignment:
Q  62 tctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgcatct 161  Q
    ||||||||||| |||||||| ||||||||||| |||||||| |||||||| ||||||||||| ||||| || || |||||||||||||||| || | |||    
T  35981485 tctttgggatagagggaaaagtaagcaaaacactgcctcaaataggatggcatttgatcataacttaacttcagggcaggtaaaatatcatctttcttct 35981584  T
Q  162 gttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtggaac 261  Q
    | |||| |||||||| ||||||||| |||| |||| ||||||||||||||||||  ||||||||||| ||||||||||||||||| ||||| ||||||||    
T  35981585 gctctagattccataactcagaatcccttacaaatacccacttatttaaatcaagctttgaaaacagggaacttcctaatgttttgacagctagtggaac 35981684  T
Q  262 tccttgacattttttcacaatttcctttgcaatcttcacaagatttggatatttttcttcttcaccttccttaaatgctgatttgacaaacagtgataaa 361  Q
    |||| ||||||||||||||||||| ||| | || | ||| |||||||||||||||  |||||||||||||||||||||  ||||||||||||| ||||||    
T  35981685 tcctcgacattttttcacaatttcttttccgatatccactagatttggatattttgtttcttcaccttccttaaatgcccatttgacaaacagagataaa 35981784  T
Q  362 c 362  Q
    |    
T  35981785 c 35981785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 62 - 362
Target Start/End: Original strand, 36002897 - 36003197
Alignment:
Q  62 tctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgcatct 161  Q
    ||||||||||| |||||||| ||||||||||| |||||||| |||||||| ||||||||||| ||||| || || |||||||||||||||| || | |||    
T  36002897 tctttgggatagagggaaaagtaagcaaaacactgcctcaaataggatggcatttgatcataacttaacttcagggcaggtaaaatatcatctttcttct 36002996  T
Q  162 gttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtggaac 261  Q
    | |||| |||||||| ||||||||| |||| |||| ||||||||||||||||||  ||||||||||| ||||||||||||||||| ||||| ||||||||    
T  36002997 gctctagattccataactcagaatcccttacaaatacccacttatttaaatcaagctttgaaaacagggaacttcctaatgttttgacagctagtggaac 36003096  T
Q  262 tccttgacattttttcacaatttcctttgcaatcttcacaagatttggatatttttcttcttcaccttccttaaatgctgatttgacaaacagtgataaa 361  Q
    |||| ||||||||||||||||||| ||| | || | ||| |||||||||||||||  |||||||||||||||||||||  ||||||||||||| ||||||    
T  36003097 tcctcgacattttttcacaatttcttttccgatatccactagatttggatattttgtttcttcaccttccttaaatgcccatttgacaaacagagataaa 36003196  T
Q  362 c 362  Q
    |    
T  36003197 c 36003197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 59 - 353
Target Start/End: Complemental strand, 36222201 - 36221907
Alignment:
Q  59 taatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgca 158  Q
    |||||||||||||| | |||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||  || |     
T  36222201 taatctttgggatacaaggaaaaataagcaaaacaatgcctcaaataggatggcatttcatcatagcttaattttaatgcaggtaaaatatcacctttct 36222102  T
Q  159 tctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtgg 258  Q
    | |||||||| ||||| ||||||   |||||||  |||  |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||    
T  36222101 tttgttctaagttccaaatctcatggtctcttacgaatatccacttatttaaatcaaattttgataacagagaacttcctaatgttttgacagccagcgg 36222002  T
Q  259 aactccttgacattttttcacaatttcctttgcaatcttcacaagatttggatatttttcttcttcaccttccttaaatgctgatttgacaaaca 353  Q
    ||||||   |||||||||||||||||| ||| |||||| ||| ||||||| ||||||||||||||| || || ||||||||  |||| |||||||    
T  36222001 aactccagcacattttttcacaatttcttttccaatctccactagatttgaatatttttcttcttctccgtctttaaatgcccatttcacaaaca 36221907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 53 - 354
Target Start/End: Complemental strand, 36218216 - 36217915
Alignment:
Q  53 aaggtgtaatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcat 152  Q
    ||||| || ||||||||||| | ||||||| |||||||||| || ||||  || ||||| ||||||||||||||||||||||  ||||||||||||||||    
T  36218216 aaggtatagtctttgggatacaaggaaaaacaagcaaaacattgtctcagatatgatggcatttgatcatagcttaattttaaagcaggtaaaatatcat 36218117  T
Q  153 tttgcatctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagc 252  Q
     || | |||||||||||||||||||||||   ||||||| ||||  |||||||| ||||||||||||||| ||||||||||||||||  ||| |||||||    
T  36218116 ctttcttctgttctaaattccatatctcatggtctcttacaaataaccacttatctaaatcaaattttgagaacagagaacttcctaccgttctcacagc 36218017  T
Q  253 cagtggaactccttgacattttttcacaatttcctttgcaatcttcacaagatttggatatttttcttcttcaccttccttaaatgctgatttgacaaac 352  Q
    ||| ||||||||   |||||||||||||||||| ||| |||||| ||| ||||||||||||||||||||||| || ||||| |||||  |||| ||||||    
T  36218016 cagcggaactccagcacattttttcacaatttcttttccaatctccactagatttggatatttttcttcttctccatccttgaatgcccatttcacaaac 36217917  T
Q  353 ag 354  Q
    ||    
T  36217916 ag 36217915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 59 - 353
Target Start/End: Original strand, 32727039 - 32727333
Alignment:
Q  59 taatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgca 158  Q
    |||||||||||||| ||||||||  |||||||||| |||||||| |||||||| ||||||||||||||||| || | ||||||||||||||||| || |     
T  32727039 taatctttgggataaagggaaaagaaagcaaaacattgcctcaaataggatggcatttgatcatagcttaacttcaatgcaggtaaaatatcatctttct 32727138  T
Q  159 tctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtgg 258  Q
    ||||||||||||||||||||||||||||||| | ||||  |||||||||||||||| ||||||| || |  ||||||| ||||||| ||||||  |||||    
T  32727139 tctgttctaaattccatatctcagaatctctcacaaatatccacttatttaaatcatattttgagaataaggaacttcgtaatgttctcacagaaagtgg 32727238  T
Q  259 aactccttgacattttttcacaatttcctttgcaatcttcacaagatttggatatttttcttcttcaccttccttaaatgctgatttgacaaaca 353  Q
    ||| |||  |||||||||||||||||| ||  |||| | ||| |||| |||||||||  || |||||||||||||||||||  ||||||||||||    
T  32727239 aacccctgcacattttttcacaatttctttgccaatatgcacgagatctggatatttaactacttcaccttccttaaatgcccatttgacaaaca 32727333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 59 - 359
Target Start/End: Original strand, 35957461 - 35957761
Alignment:
Q  59 taatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgca 158  Q
    |||||||||||||| |||||||||||||||||||| || ||||  || ||||| ||||||||||| ||||||||||| |||||||||||||||||   |     
T  35957461 taatctttgggataaagggaaaaataagcaaaacattgtctcagatatgatggcatttgatcataacttaattttagcgcaggtaaaatatcattaatct 35957560  T
Q  159 tctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtgg 258  Q
    | |||||||||||||| |||||||| || || | ||||||||||||| ||| |||||| ||||| || ||||||||| |||| ||| |||| || |||||    
T  35957561 tttgttctaaattccacatctcagagtccctaacaaattcccacttacttatatcaaagtttgagaagagagaacttgctaaagttctcacggctagtgg 35957660  T
Q  259 aactccttgacattttttcacaatttcctttgcaatcttcacaagatttggatatttttcttcttcaccttccttaaatgctgatttgacaaacagtgat 358  Q
    ||| ||||| ||||||||||||||||| ||| ||||||  ||  |||||||||| |||| |||||| |||||||| |||||  ||||||||||||| |||    
T  35957661 aaccccttggcattttttcacaatttcttttccaatctctacttgatttggataatttttttcttcgccttccttgaatgcccatttgacaaacagagat 35957760  T
Q  359 a 359  Q
    |    
T  35957761 a 35957761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 59 - 362
Target Start/End: Original strand, 35976916 - 35977219
Alignment:
Q  59 taatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgca 158  Q
    |||||||||||||| ||||||| |||| ||||||| || ||||  || ||||| ||||||||||||||||||||||| |||||||||||| ||| || |     
T  35976916 taatctttgggataaagggaaatataaacaaaacattgtctcatatatgatggcatttgatcatagcttaattttagcgcaggtaaaataccatctttct 35977015  T
Q  159 tctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtgg 258  Q
    | |||||||||||||| |||||||| || || |  |||||||||||  ||| |||||| ||||| || |||||||||||||||||| ||||||| || ||    
T  35977016 tttgttctaaattccacatctcagagtccctaacgaattcccacttgcttatatcaaagtttgagaagagagaacttcctaatgttctcacagctagcgg 35977115  T
Q  259 aactccttgacattttttcacaatttcctttgcaatcttcacaagatttggatatttttcttcttcaccttccttaaatgctgatttgacaaacagtgat 358  Q
    ||| ||||| || ||||| |||||||| ||| | ||||  || |||||||||||||||| |||||| |||||||| || ||  ||||||||||||| |||    
T  35977116 aaccccttggcacttttttacaatttcttttccgatctctactagatttggatattttttttcttcgccttccttgaacgcccatttgacaaacagagat 35977215  T
Q  359 aaac 362  Q
    ||||    
T  35977216 aaac 35977219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 59 - 362
Target Start/End: Original strand, 35998328 - 35998631
Alignment:
Q  59 taatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgca 158  Q
    |||||||||||||| ||||||| |||| ||||||| || ||||  || ||||| ||||||||||||||||||||||| |||||||||||| ||| || |     
T  35998328 taatctttgggataaagggaaatataaacaaaacattgtctcatatatgatggcatttgatcatagcttaattttagcgcaggtaaaataccatctttct 35998427  T
Q  159 tctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtgg 258  Q
    | |||||||||||||| |||||||| || || |  |||||||||||  ||| |||||| ||||| || |||||||||||||||||| ||||||| || ||    
T  35998428 tttgttctaaattccacatctcagagtccctaacgaattcccacttgcttatatcaaagtttgagaagagagaacttcctaatgttctcacagctagcgg 35998527  T
Q  259 aactccttgacattttttcacaatttcctttgcaatcttcacaagatttggatatttttcttcttcaccttccttaaatgctgatttgacaaacagtgat 358  Q
    ||| ||||| || ||||| |||||||| ||| | ||||  || |||||||||||||||| |||||| |||||||| || ||  ||||||||||||| |||    
T  35998528 aaccccttggcacttttttacaatttcttttccgatctctactagatttggatattttttttcttcgccttccttgaacgcccatttgacaaacagagat 35998627  T
Q  359 aaac 362  Q
    ||||    
T  35998628 aaac 35998631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 64 - 354
Target Start/End: Original strand, 35946258 - 35946548
Alignment:
Q  64 tttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgcatctgt 163  Q
    ||||||| | || ||||||||||||||||| || || |  || ||||| ||||||||||| ||||||||||| |||||||| ||||||| || | | |||    
T  35946258 tttgggaaaaagagaaaaataagcaaaacattgtcttagatatgatggcatttgatcataacttaattttagcgcaggtaagatatcatctttcttttgt 35946357  T
Q  164 tctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtggaactc 263  Q
    ||||||||||| |||||||| || || |  |||||||||||| ||| |||||| ||||| || ||||||||| |||||||| |||| || |||||||| |    
T  35946358 tctaaattccacatctcagagtccctaacgaattcccacttacttatatcaaagtttgagaagagagaacttgctaatgttctcacggctagtggaaccc 35946457  T
Q  264 cttgacattttttcacaatttcctttgcaatcttcacaagatttggatatttttcttcttcaccttccttaaatgctgatttgacaaacag 354  Q
    |||| ||||||||||||||||| ||| | |||   || ||||||||||| |||| ||||||||||||||| |||||  |||||||||||||    
T  35946458 cttggcattttttcacaatttcttttcctatcgctactagatttggatactttttttcttcaccttccttgaatgcccatttgacaaacag 35946548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 104 - 333
Target Start/End: Original strand, 35951937 - 35952166
Alignment:
Q  104 taggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgcatctgttctaaattccatatctcagaatctcttataaattcccact 203  Q
    |||||||  |||||||||||||||||||| || |||||||||||||||| || |   |||||||||||||| ||  |||| ||||| | |||||||||||    
T  35951937 taggatgacatttgatcatagcttaatttcagggcaggtaaaatatcatctttctgttgttctaaattccaaatagcagagtctctgacaaattcccact 35952036  T
Q  204 tatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtggaactccttgacattttttcacaatttcctttgcaatcttcacaag 303  Q
    || ||||||| || ||||| || || |||||||| |||| |||||||||||||||||| |||||||||||||||||| | || ||| ||||||  || ||    
T  35952037 tacttaaatcgaagtttgagaagagggaacttcccaatgatttcacagccagtggaaccccttgacattttttcacagtatcttttccaatctctactag 35952136  T
Q  304 atttggatatttttcttcttcaccttcctt 333  Q
    |||||||||||||| |||||| || |||||    
T  35952137 atttggatattttttttcttcgccatcctt 35952166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 7e-65; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 61 - 362
Target Start/End: Original strand, 18125183 - 18125484
Alignment:
Q  61 atctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgcatc 160  Q
    |||||| ||||| ||||| ||||||||||| || ||||| || |||||||| ||||| |||||||| ||||||||||||||||||||||||| ||    |    
T  18125183 atctttaggataaagggagaaataagcaaagcattgccttaaataggatggcatttggtcatagctcaattttagtgcaggtaaaatatcatctttttgc 18125282  T
Q  161 tgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtggaa 260  Q
    |||| ||||||||| | |||||||||||||| ||||  |||  ||||||||||||||||||| || || ||||||||||||||| | ||||| |||||||    
T  18125283 tgttttaaattccacagctcagaatctcttacaaatatccatgtatttaaatcaaattttgagaatagggaacttcctaatgttctaacagctagtggaa 18125382  T
Q  261 ctccttgacattttttcacaatttcctttgcaatcttcacaagatttggatatttttcttcttcaccttccttaaatgctgatttgacaaacagtgataa 360  Q
    | ||||| |||||||||||||| || ||| | ||||  || ||||||||||||||||||||||| |||||||| |||||  |||||||||| || |||||    
T  18125383 ccccttggcattttttcacaatctcttttcctatctctactagatttggatatttttcttcttcgccttccttgaatgcccatttgacaaatagagataa 18125482  T
Q  361 ac 362  Q
    ||    
T  18125483 ac 18125484  T

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Target: chr1; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 83 - 381
Target Start/End: Original strand, 18117552 - 18117850
Alignment:
Q  83 taagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgcatctgttctaaattccatatctcag 182  Q
    |||||||| |||||||| || |||||||| |||| |||||||||||||||||||||||||||||||||||||||| | ||||||||| |||| |||||||    
T  18117552 taagcaaagcagtgccttaaataggatggcattttatcatagcttaattttagtgcaggtaaaatatcattttgcttttgttctaaagtccacatctcag 18117651  T
Q  183 aatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtggaactccttgacattttttcacaat 282  Q
    | ||||||  || |||||| ||||||||||||||||||||||||||| | |||||||||||| ||||  | |||||||| ||    ||||| ||||||||    
T  18117652 agtctcttgcaagttcccatttatttaaatcaaattttgaaaacagacagcttcctaatgttctcacgacgagtggaacccccgcgcatttcttcacaat 18117751  T
Q  283 ttcctttgcaatcttcacaagatttggatatttttcttcttcaccttccttaaatgctgatttgacaaacagtgataaactgttctctttagaaaggcc 381  Q
    ||| ||| | ||||  || |||||||||||||| |||||||| |||||||| |||||  |||| |||||||  ||||||| ||| ||  ||||||||||    
T  18117752 ttcttttcctatctcaactagatttggatatttgtcttcttcgccttccttgaatgcccatttcacaaacaaagataaacagttttcaatagaaaggcc 18117850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 59 - 351
Target Start/End: Complemental strand, 26329243 - 26328951
Alignment:
Q  59 taatctttgggatatagggaaaaataagcaaaacagtgcctcaagtaggatggtatttgatcatagcttaattttagtgcaggtaaaatatcattttgca 158  Q
    |||||||||||| | |||||||||||||||||||| || ||||| |||||||| ||||||||||||||||| || ||  ||||||||||||||| ||       
T  26329243 taatctttgggaaaaagggaaaaataagcaaaacaatgtctcaaataggatggcatttgatcatagcttaacttaagcacaggtaaaatatcatctttgt 26329144  T
Q  159 tctgttctaaattccatatctcagaatctcttataaattcccacttatttaaatcaaattttgaaaacagagaacttcctaatgttttcacagccagtgg 258  Q
    | ||   |||||||||||| |  || || || |  || | |||||||| ||||||||||||||| || || ||||||||||| |||||||| || | |||    
T  26329143 tttgccttaaattccatatttgggagtccctgacgaacttccacttatctaaatcaaattttgagaagagtgaacttcctaacgttttcactgctaatgg 26329044  T
Q  259 aactccttgacattttttcacaatttcctttgcaatcttcacaagatttggatatttttcttcttcaccttccttaaatgctgatttgacaaa 351  Q
    ||  ||| | ||||||||| | || || ||| |||||| |   |||| |||||| ||| ||||||| ||||||||||||||  ||||||||||    
T  26329043 aatccctcggcattttttcgctatatcttttccaatctccgatagatgtggatactttacttcttctccttccttaaatgcccatttgacaaa 26328951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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